ID:ssc-mir-497 |
Coordinate:chr12:54717025-54717104 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -43.6 | -43.5 | -43.1 |
 |
 |
 |
|
TCGCAGCCCTGGCGCGTGCTCCCTTCCTCTCAACCCACCCCAGTCCTGCTCCCGCCCCAGCAGCACACTGTGGTTTGTACGGCACTGTGGCCACGTCCAAACCACACTGTGGTGTTAGAGCGAGGGTGGGGGAGGCATCGCGGAGGCTTGGCCCGGAGGCCACCCTGGAGAAGCGACACA
******************************************......(((((((((.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).......)))))))))..********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139075 testes |
SRR066809 ovary |
SRR066810 testes |
SRR1274763 ovary |
SRR139076 testes |
SRR1274764 testes |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................CAGCAGCACACTGTGGTTTGT...................................................................................................... | 21 | 0 | 1 | 2678.00 | 2678 | 1102 | 461 | 289 | 362 | 293 | 171 |
| .........................................................CAGCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 0 | 1 | 2442.00 | 2442 | 560 | 750 | 437 | 408 | 106 | 181 |
| .........................................................CAGCAGCACACTGTGGTTTGTAA.................................................................................................... | 23 | 1 | 1 | 298.00 | 298 | 120 | 74 | 42 | 11 | 41 | 10 |
| .........................................................CAGCAGCACACTGTGGTTTGTAT.................................................................................................... | 23 | 1 | 1 | 178.00 | 178 | 54 | 44 | 54 | 9 | 15 | 2 |
| .........................................................CAGCAGCACACTGTGGTTTG....................................................................................................... | 20 | 0 | 1 | 138.00 | 138 | 42 | 28 | 12 | 30 | 11 | 15 |
| ..........................................................AGCAGCACACTGTGGTTTGTAC.................................................................................................... | 22 | 0 | 1 | 127.00 | 127 | 43 | 36 | 17 | 7 | 22 | 2 |
| .................................................................................................CAAACCACACTGTGGTGTTAGA............................................................. | 22 | 0 | 1 | 106.00 | 106 | 0 | 70 | 36 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTA..................................................................................................... | 21 | 0 | 1 | 96.00 | 96 | 35 | 31 | 17 | 2 | 7 | 4 |
| ..........................................................AGCAGCACACTGTGGTTTGT...................................................................................................... | 20 | 0 | 1 | 87.00 | 87 | 51 | 11 | 7 | 1 | 12 | 5 |
| .........................................................CAGCAGCACACTGTGGTTTGTAC.................................................................................................... | 23 | 0 | 1 | 62.00 | 62 | 13 | 21 | 9 | 16 | 1 | 2 |
| ................................................................................................CCAAACCACACTGTGGTGTTAGA............................................................. | 23 | 0 | 1 | 40.00 | 40 | 2 | 26 | 12 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTT..................................................................................................... | 22 | 1 | 1 | 33.00 | 33 | 5 | 15 | 6 | 2 | 3 | 2 |
| .........................................................CAGCAGCACACTGTGGTTTGA...................................................................................................... | 21 | 1 | 1 | 28.00 | 28 | 9 | 12 | 4 | 0 | 1 | 2 |
| ..........................................................AGCAGCACACTGTGGTTTGTACA................................................................................................... | 23 | 1 | 1 | 24.00 | 24 | 10 | 3 | 3 | 0 | 8 | 0 |
| .................................................................................................CAAACCACACTGTGGTGTTGGA............................................................. | 22 | 1 | 1 | 20.00 | 20 | 0 | 18 | 2 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTAA.................................................................................................... | 22 | 1 | 1 | 20.00 | 20 | 10 | 0 | 2 | 0 | 8 | 0 |
| ...............................................................................CGGCACTGTGGCCACGTC................................................................................... | 18 | 0 | 1 | 19.00 | 19 | 1 | 8 | 9 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTT........................................................................................................ | 19 | 0 | 1 | 17.00 | 17 | 14 | 0 | 0 | 1 | 1 | 1 |
| .........................................................CAGCAGCACACTGTGGTT......................................................................................................... | 18 | 0 | 1 | 15.00 | 15 | 4 | 0 | 2 | 8 | 0 | 1 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAA................................................................................................... | 24 | 2 | 1 | 14.00 | 14 | 3 | 6 | 5 | 0 | 0 | 0 |
| .........................................................CGGCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 12.00 | 12 | 5 | 1 | 1 | 1 | 0 | 4 |
| .........................................................CGGCAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 11.00 | 11 | 2 | 5 | 1 | 0 | 1 | 2 |
| .........................................................CAGCAGCACACTGTGGTTTGTAG.................................................................................................... | 23 | 1 | 1 | 10.00 | 10 | 4 | 3 | 2 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGGTTGT...................................................................................................... | 21 | 1 | 1 | 10.00 | 10 | 3 | 3 | 0 | 0 | 4 | 0 |
| ........................................................ACAGCAGCACACTGTGGTTTGT...................................................................................................... | 22 | 1 | 1 | 9.00 | 9 | 0 | 5 | 2 | 2 | 0 | 0 |
| .........................................................TAGCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 9.00 | 9 | 1 | 7 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGCTTGT...................................................................................................... | 21 | 1 | 1 | 9.00 | 9 | 6 | 0 | 0 | 0 | 3 | 0 |
| .........................................................CAGCAGCACACTGTGGCTTGTA..................................................................................................... | 22 | 1 | 1 | 8.00 | 8 | 5 | 1 | 0 | 0 | 2 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAGA................................................................................................... | 24 | 2 | 1 | 7.00 | 7 | 1 | 2 | 2 | 1 | 0 | 1 |
| .........................................................CAGCAGCACACTGTGGTAT........................................................................................................ | 19 | 1 | 1 | 6.00 | 6 | 5 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGCGGTTTGT...................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 4 | 0 | 0 | 0 | 2 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTAT.................................................................................................... | 22 | 1 | 1 | 6.00 | 6 | 4 | 1 | 0 | 0 | 1 | 0 |
| ...............................................................................................TCCAAACCACACTGTGGTGTTAGA............................................................. | 24 | 0 | 1 | 6.00 | 6 | 0 | 5 | 1 | 0 | 0 | 0 |
| .........................................................CAGCCGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 6.00 | 6 | 5 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCATACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 2 | 0 | 0 | 0 | 4 | 0 |
| .........................................................TAGCAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 4 | 2 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACCCTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 3 | 0 | 0 | 0 | 3 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGGA..................................................................................................... | 22 | 1 | 1 | 5.00 | 5 | 3 | 0 | 0 | 0 | 2 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTACG................................................................................................... | 24 | 0 | 1 | 4.00 | 4 | 1 | 0 | 2 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGCGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 4.00 | 4 | 0 | 1 | 0 | 2 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGT.......................................................................................................... | 17 | 0 | 1 | 4.00 | 4 | 2 | 0 | 0 | 0 | 2 | 0 |
| .........................................................CAGCCGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGTAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 1 | 1 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTC..................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 2 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAGT................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 0 | 2 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACATTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 1 | 0 | 0 | 1 | 1 | 0 |
| ........................................................CCAGCAGCACACTGTGGTTTGTA..................................................................................................... | 23 | 0 | 1 | 3.00 | 3 | 0 | 2 | 0 | 1 | 0 | 0 |
| ......................................................ATTCAGCAGCACACTGTGGTTTGTA..................................................................................................... | 25 | 3 | 1 | 3.00 | 3 | 0 | 1 | 2 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAT................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 1 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTT........................................................................................................ | 18 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGGTTGTA..................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................GCACACTGTGGTTTGTA..................................................................................................... | 17 | 0 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGATTGT...................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCATACTGTGGTTTGTAA.................................................................................................... | 23 | 2 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTAGA................................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CATCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGTAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .........................................................CAGCAGCCCACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGG...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGAACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGGGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAGAAC................................................................................................. | 26 | 3 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTTTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
| .........................................................CAGCAGCGCACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................CAAACCACACTGTGGTGTTAG.............................................................. | 21 | 0 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTCAGC.................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCGGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACGCTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGATTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAC................................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| .........................................................CAGCATCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACCGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAAGC................................................................................................. | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTG....................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CATCAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTAGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 0 | 1 | 0 | 0 | 1 |
| .........................................................CCGCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCGCACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTATT................................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 0 | 0 | 1 | 1 | 0 | 0 |
| .........................................................CAGCAGCACAATGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................CAGCACACTGTGGTTTGTACGGCACTG............................................................................................. | 27 | 0 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGTTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................CAGCACACTGTGGTTTGT...................................................................................................... | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGAA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| ......................................CCCAGTCCTGCTCCCGCCC........................................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGAGGTTTGT...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................CCAAACCACACTGTGGTGTTAGT............................................................. | 23 | 1 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| .............................................................AGCACACTGTGGTTTGTA..................................................................................................... | 18 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................AAGCAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTA......................................................................................................... | 18 | 1 | 3 | 1.67 | 5 | 4 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTA....................................................................................................... | 20 | 1 | 2 | 1.50 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .........................................................TAGCAGCACACTGTGGTTTGTAA.................................................................................................... | 23 | 2 | 2 | 1.50 | 3 | 1 | 0 | 2 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGTTTTGT...................................................................................................... | 21 | 1 | 2 | 1.50 | 3 | 1 | 0 | 0 | 0 | 2 | 0 |
| .........................................................CGGCAGCACACTGTGGTTTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTCGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................CAAACCACACTGTGGTGTTGGAA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................CGGCACTGTGGCCACGTCT.................................................................................. | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCCGCACACTGTGGTTTGT...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................GCAGCACACTGTGGTTTGT...................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCATCACACTGTGGTTTGTAC.................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................TTCAGCAGCACACTGTGGTTTGTA..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACTCTGTGGTTTGTAC.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAGGA................................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCTCACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................CCAAGTCCTGCTCCCGCCC........................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGTACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTTTAC.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................GCAGCACACTGTGGTTTGA...................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGAAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTACGGA................................................................................................. | 26 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................CCAAACCACACTGTGGTGTTAG.............................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGGTTGTAA.................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................CCAAACCACATTGTGGTGTTAG.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACAATGTGGTTTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................GCAGCACACTGTGGTTTGTA..................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................TCCAAACCACACTGTGGTGTTA............................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTATA................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................GCAGCACACTGTGGTTTGTAC.................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGTACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................AGCAGCACACTGTGGTT......................................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..........................................................AGCAGCACGCTGTGGTTTGTAC.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .............................................................AGCACACTGTGGTTTGTAC.................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCGGCACACTGTGGTTTGTACGCA................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCATCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCAGACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTT....................................................................................................... | 20 | 1 | 2 | 1.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAACACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAAAA.................................................................................................. | 25 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTATGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................................................TAAACCACACTGTGGTGTTAGA............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTACAAC................................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTACG................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CACCAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................TAGCAGCACACTGTGGTTTGTACG................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGCGGTTTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTATGGA................................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...............................................................................................TCCAAACCACACTGTGGTGTTAG.............................................................. | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................AGCAGCATACTGTGGTTTGTAA.................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..............................................................GCACACTGTGGTTTGTAC.................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................CCAAACCACACTGTGGTGTTAGG............................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................AAACCACACTGTGGTGTTAGA............................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......................................................ATTCAGCAGCACACTGTGGTTTGT...................................................................................................... | 24 | 3 | 3 | 1.00 | 3 | 0 | 2 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACCGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTACT................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAACAGCACACTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGATTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACAGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTACTC.................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCAGACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGATTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACCCTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGTACACTGTGGTTTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTATC................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTAGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCGGCACACTGTGGTTTGTAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................GGCACTGTGGCCACGTC................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAACAGCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTCAGAC................................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................CCAAACCACACTGTGGTGTTGGA............................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGCAT.................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCACCACACTGTGGTTTGT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAGAA.................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACATTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................CACAGCAGCACACTGTGGTTTGT...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACCGTGGTTTGTAC.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................CCAGCAGCACACTGTGGTTTGT...................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................CGGCACTGTGGCCACGTCA.................................................................................. | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTACA................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................TAGCAGCACACTGTAGTTTGTA..................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGTTTGTACT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .............................................................AGCACACTGTGGTTTGT...................................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACTCTGTGGTTTGTA..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTGTAGGAC................................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTA........................................................................................................ | 19 | 1 | 4 | 0.75 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGCTTGCA..................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACATTGTGGTTTGTACA................................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..............................................................GCACACTGTGGTTTGT...................................................................................................... | 16 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGTACACTGTGGTTTGT...................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCTCACTGTGGTTTG....................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................CAAACCACACTGTGGTGTTGG.............................................................. | 21 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................CGGCACTGTGGCCACGTCTT................................................................................. | 20 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CGGCAGCACACTGTGGGTTGT...................................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................AAGCTGCACACTGTGGTTTGTA..................................................................................................... | 22 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACACTGTGGT.......................................................................................................... | 16 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CACACTGTGGTTTGTA..................................................................................................... | 16 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AGCAGCACATTGTGGTTTGTAT.................................................................................................... | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTTGTTTG....................................................................................................... | 20 | 1 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CATCAGCACACTGTGGTTT........................................................................................................ | 19 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................ACACTGTGGTTTGTA..................................................................................................... | 15 | 0 | 7 | 0.29 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTTGT....................................................................................................... | 20 | 2 | 18 | 0.28 | 5 | 3 | 0 | 0 | 0 | 2 | 0 |
| .........................................................CAGCAGTACACTGTGGTTT........................................................................................................ | 19 | 1 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................................................CAGCAGCAAACTGTGGTTTGT...................................................................................................... | 21 | 1 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTCTGGTTTGCA..................................................................................................... | 22 | 2 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGGTTGC...................................................................................................... | 21 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................ACACTGTGGTTTGTAC.................................................................................................... | 16 | 0 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGCTTGC...................................................................................................... | 21 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................CAGCAGCACACTGTGGTTTAA...................................................................................................... | 21 | 2 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGGTGTTTGT...................................................................................................... | 21 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................CAGCAGCACCCTGTGGTTTGA...................................................................................................... | 21 | 2 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................TGCACGGCACTGGGGACACGT.................................................................................... | 21 | 3 | 20 | 0.10 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGTGGTAAG....................................................................................................... | 20 | 2 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................CAGCAGCACACTGCTGTTTGT...................................................................................................... | 21 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................GCGAGGGTGGGGGAG.............................................. | 15 | 0 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................GCTCCTGCTCCAGCAGCACAATG.............................................................................................................. | 23 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
|
AGCGTCGGGACCGCGCACGAGGGAAGGAGAGTTGGGTGGGGTCAGGACGAGGGCGGGGTCGTCGTGTGACACCAAACATGCCGTGACACCGGTGCAGGTTTGGTGTGACACCACAATCTCGCTCCCACCCCCTCCGTAGCGCCTCCGAACCGGGCCTCCGGTGGGACCTCTTCGCTGTGT
**********************************************......(((((((((.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).......)))))))))..****************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR066810 testes |
|---|---|---|---|---|---|---|---|
| ..............................................................................................CAGGTTTGGTGTGACACCACAA................................................................ | 22 | 0 | 1 | 3.00 | 3 | 2 | 1 |
| .............................................................................................ACAGGTTTGGTGTGACACCACAA................................................................ | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 |
| ..........................................................................................GGTGCAGGTTTGGTGTGACACCAC.................................................................. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ..........................................................................................GGTGCAGGTTTGGTGTGACACCACAA................................................................ | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ................................................................................................GGTTTGGTGTGACACCACAA................................................................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ..........................................................................................GGTGCAGGTTTGGTGTGACACCA................................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 |
Generated: 09/01/2015 at 11:25 AM