ID:ssc-mir-491 |
Coordinate:chr1:225810907-225810982 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
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|
| -41.1 | -41.0 | -40.9 |
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TTGGATACTTGCAGCAGTTACCTTCGGAGATGCCTGCTGTGGGAATTGACTTAGCTGGGTAGTGGGGAACCCTTCCATGAGGAGTAGAACACTCCTTATGCAAGATTCCCTTCTACCTGACTGGGTTGGAGTCATATCCTGTGCAGCACAGGTGCTTACCATGAAGAAGATGAAGG
*********************************************(((((((((.(((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).))))))).)))))))))..********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139075 testes |
SRR066809 ovary |
SRR066810 testes |
SRR139076 testes |
SRR1274764 testes |
SRR1274763 ovary |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................AGTGGGGAACCCTTCCATGAGGA............................................................................................. | 23 | 0 | 1 | 104.00 | 104 | 87 | 3 | 0 | 13 | 1 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAGG.............................................................................................. | 22 | 0 | 1 | 96.00 | 96 | 28 | 29 | 30 | 2 | 7 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTAC............................................................ | 22 | 0 | 1 | 48.00 | 48 | 5 | 22 | 20 | 0 | 0 | 1 |
| ............................................................AGTGGGGAACCCTTCCATGAGGAA............................................................................................ | 24 | 1 | 1 | 13.00 | 13 | 7 | 2 | 0 | 2 | 1 | 1 |
| ............................................................AGTGGGGAACCCTTCCATGAGGT............................................................................................. | 23 | 1 | 1 | 8.00 | 8 | 4 | 1 | 3 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCT.............................................................. | 20 | 0 | 1 | 7.00 | 7 | 0 | 4 | 2 | 0 | 0 | 1 |
| ............................................................AGTGGGGAACCCTTCCATGAGGAT............................................................................................ | 24 | 1 | 1 | 7.00 | 7 | 2 | 2 | 2 | 0 | 0 | 1 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTAT............................................................ | 22 | 1 | 1 | 6.00 | 6 | 1 | 2 | 2 | 0 | 1 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAG............................................................................................... | 21 | 0 | 1 | 6.00 | 6 | 6 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................TGGGGAACCCTTCCATGAGGAGT........................................................................................... | 23 | 0 | 1 | 4.00 | 4 | 0 | 3 | 1 | 0 | 0 | 0 |
| ...............................................................................................TTATGCAAGATTCCCTTCTAC............................................................ | 21 | 0 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 |
| ...........................................................TAGTGGGGAACCCTTCCATGAGG.............................................................................................. | 23 | 0 | 1 | 3.00 | 3 | 1 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTAA............................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ............................................................ATTGGGGAACCCTTCCATGAGGAT............................................................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTA............................................................. | 21 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAGA.............................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 1 | 0 | 1 | 0 |
| .............................................................GTGGGGAACCCTTCCATGAGGA............................................................................................. | 22 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............................................................AATGGGGAACCCTTCCATGAGG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGCAACCCTTCCATGAGG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................AGTGGGGAATCCTTCCATGAGGT............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTACA........................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCATCCATGAGGA............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGCGGGGAACCCTTCCATGAGGA............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAGGATA........................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................TGGGGAACCCTTCCATGAGGAG............................................................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAGGAC............................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................CAGTGGGGAACCCTTCCATGAGGA............................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCAAGGTTCCCTTCTAT............................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................TTATGCAAGATTCCCTTCTACA........................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCTTCCATGAGGAAA........................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ............................................................AGTGGGGAACTCTTCCATGAGGA............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCGTTCCATGAGGA............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAACCCTTCCATTAGGA............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATCCCCTTCTAC............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................TGGGGAACCCTTCCATGAGGA............................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGTGGGGAATCCTTCCATGAGG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCTAGATTCCCTTCTAT............................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................TTATGCAAGATTCCCTTCTAT............................................................ | 21 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................CTTATGCAAGATTCCCTTCTTT............................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
|
AACCTATGAACGTCGTCAATGGAAGCCTCTACGGACGACACCCTTAACTGAATCGACCCATCACCCCTTGGGAAGGTACTCCTCATCTTGTGAGGAATACGTTCTAAGGGAAGATGGACTGACCCAACCTCAGTATAGGACACGTCGTGTCCACGAATGGTACTTCTTCTACTTCC
*********************************************(((((((((.(((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).))))))).)))))))))..********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 11:20 AM