ID:

ssc-mir-486-1

 Coordinate:

chr17:12191266-12191345 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-58.0 -58.0 -57.2 -57.2
mature

  1. ssc-mir-486-1  chr17:12191279-12191300 -
  2. GL894726-2:3516-3537 -
star

Sense Strand Reads

TGGGGAGCGGGCGGGGGAGGCCATCAAGGCTCTTGGGTGCGGGGAGCAGCGCTGGGGCTTCAGGGCCAGCTCGGACCTCTGACCTCCCTGACGGGTCCTGTACTGAGCTGCCCCGAGGCCCTCACTGTGCCCAGCTCGGGCCAGCTCAGTACCCGGCGCGTCGGGGTGGGAGTCGGCCGG

***********************************.((.....((((.(((((((((((((.(((.((((((((((....(((((.......)))))..)).))))))))))).))))))).))..))))...))))......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR139075

testes		 SRR1274763

ovary		 SRR1274764

testes		 SRR139076

testes
...............................................................................................TCCTGTACTGAGCTGCCCCGAG............................................................... 22 0 2 828.00 1656 570 545 282 114 126 19
...............................................................................................TCCTGTACTGAGCTGCCCCGA................................................................ 21 0 2 621.50 1243 466 435 239 64 14 25
...............................................................................................TCCTGTACTGAGCTGCCCCGAGA.............................................................. 23 1 2 558.50 1117 445 430 74 62 99 7
...............................................................................................TCCTGTACTGAGCTGCCCCGAGT.............................................................. 23 1 2 272.50 545 80 104 95 147 117 2
...............................................................................................TCCTGTACTGAGCTGCCCCG................................................................. 20 0 2 127.50 255 111 131 7 4 1 1
...............................................................................................TCCTGTACTGAGCTGCCCCGAA............................................................... 22 1 2 15.50 31 8 10 11 2 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAG............................................................... 20 0 2 14.00 28 6 13 5 0 0 4
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTT............................................................. 24 2 2 10.50 21 5 0 4 9 2 1
...............................................................................................TCCTGTACTGAGCTGCCCCGAT............................................................... 22 1 2 9.50 19 6 3 8 1 1 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGG.............................................................. 23 0 2 8.50 17 6 1 3 4 3 0
.................................................................................................CTGTACTGAGCTGCCCCGA................................................................ 19 0 2 7.50 15 6 7 1 0 0 1
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAA............................................................. 24 2 2 6.50 13 3 5 0 2 3 0
.................................................................................................CTGTACTGAGCTGCCCCGAGA.............................................................. 21 1 2 6.50 13 4 8 1 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAGT.............................................................. 21 1 2 6.00 12 3 3 2 2 0 2
...............................................................................................TCCTGTACTGAGTTGCCCCGAG............................................................... 22 1 2 4.50 9 6 3 0 0 0 0
........................................................................................................................................CGGGCCAGCTCAGTACCCGGCGT..................... 23 1 2 4.00 8 0 0 6 0 0 2
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAT............................................................. 24 2 2 4.00 8 2 1 1 3 1 0
...............................................................................................TCCTGTACTGAGCTGCCTCGAGA.............................................................. 23 2 2 3.00 6 0 0 6 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTCCGAG............................................................... 22 1 2 3.00 6 2 1 3 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCTCGAGT.............................................................. 23 2 2 3.00 6 0 0 6 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAA.............................................................. 23 2 2 3.00 6 2 1 0 2 1 0
...............................................................................................TCCTGTACTGAGCTGCC.................................................................... 17 0 3 2.67 8 1 3 4 0 0 0
..............................................................................................ATCCTGTACTGAGCTGCCCCGA................................................................ 22 1 2 2.50 5 4 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGT................................................................ 21 1 2 2.50 5 2 1 1 1 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTTT............................................................ 25 3 2 2.50 5 0 0 0 4 1 0
...............................................................................................TCTTGTACTGAGCTGCCCCGAG............................................................... 22 1 2 2.00 4 0 4 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGTCCCGAG............................................................... 22 1 2 2.00 4 1 0 3 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAGGT............................................................. 22 1 2 2.00 4 1 3 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTAT............................................................ 25 3 2 2.00 4 0 1 0 1 2 0
...............................................................................................TCCTGTACTAAGCTGCCCCGAG............................................................... 22 1 2 1.50 3 2 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCC.................................................................. 19 0 2 1.50 3 2 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGGT............................................................. 24 1 2 1.50 3 3 0 0 0 0 0
...............................................................................................TCCAGTACTGAGCTGCCCCGA................................................................ 21 1 2 1.50 3 1 2 0 0 0 0
...............................................................................................TCCTGTACTGAGCTCCCCCGAGA.............................................................. 23 2 2 1.50 3 1 0 2 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAC............................................................... 22 1 2 1.50 3 1 1 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAGA............................................................. 24 2 2 1.50 3 1 2 0 0 0 0
...............................................................................................TCCTGTATTGAGCTGCCCCGAG............................................................... 22 1 2 1.50 3 0 0 3 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGCG............................................................... 22 1 2 1.50 3 0 1 2 0 0 0
...............................................................................................ACCTGTACTGAGCTGCCCCGAG............................................................... 22 1 2 1.50 3 1 0 1 1 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAT.............................................................. 23 2 2 1.50 3 1 0 1 0 1 0
.................................................................................................CTGTACTGAGCTGCCCCGAGG.............................................................. 21 0 2 1.50 3 1 1 0 0 1 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGC.............................................................. 23 1 2 1.50 3 1 0 2 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGATT.............................................................. 23 2 2 1.50 3 1 1 0 1 0 0
..............................................................................................CTCCTGTACTGAGCTGCCCCGAG............................................................... 23 1 2 1.50 3 1 1 0 1 0 0
...............................................................................................TCCTGTACTGAGCTTCCCCGAG............................................................... 22 1 2 1.50 3 2 0 1 0 0 0
..............................................................................................ATCCTGTACTGAGCTGCCCCGAG............................................................... 23 1 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCTGA................................................................ 21 1 2 1.00 2 0 1 1 0 0 0
................................................................................................TCTGTACTGAGCTGCCCCGAG............................................................... 21 1 2 1.00 2 0 0 2 0 0 0
...............................................................................................TTCTGTACTGAGCTGCCCCGAGT.............................................................. 23 2 2 1.00 2 0 1 1 0 0 0
...............................................................................................TCCTGTGCTGAGCTGCCCCGAGA.............................................................. 23 2 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTAAGCTGCCCCGA................................................................ 21 1 2 1.00 2 2 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCAAG............................................................... 22 1 2 1.00 2 1 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCC................................................................... 18 0 2 1.00 2 1 1 0 0 0 0
................................................................................................CCTGTACTGAGCTGCCCCGAG............................................................... 21 0 2 1.00 2 0 0 0 2 0 0
.................................................................................................CTGTACTGAGCTACCCCGAGA.............................................................. 21 2 2 1.00 2 2 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGGG............................................................... 22 1 2 1.00 2 0 2 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCACGAGA.............................................................. 23 2 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAGT............................................................ 25 3 2 1.00 2 1 0 0 1 0 0
............................................................................................ATTTCCTGTACTGAGCTGCCCCGAG............................................................... 25 3 2 1.00 2 1 1 0 0 0 0
................................................................................................CCTGTACTGAGCTGCCCCGAGT.............................................................. 22 1 2 1.00 2 0 0 1 1 0 0
........................................................................................................................................CGGGCCAGCTCAGTACCCGGCG...................... 22 0 2 1.00 2 1 0 1 0 0 0
...............................................................................................TCCTGTACTGAGTTGCCCCGA................................................................ 21 1 2 1.00 2 1 0 1 0 0 0
..............................................................................................CTCCTGTACTGAGCTGCCCCGA................................................................ 22 1 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCAA................................................................ 21 1 2 1.00 2 0 2 0 0 0 0
...............................................................................................TCCTGTACTGAGTTGCCCCGAGA.............................................................. 23 2 2 1.00 2 2 0 0 0 0 0
...............................................................................................ACCTGTACTGAGCTGCCCCGAGT.............................................................. 23 2 2 1.00 2 0 1 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTA............................................................. 24 2 2 1.00 2 1 0 0 1 0 0
...............................................................................................TCCTGTACTGAGCTGCTCCGAGT.............................................................. 23 2 2 1.00 2 1 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCA................................................................. 20 1 2 1.00 2 2 0 0 0 0 0
...............................................................................................TCCTGTACTGGGCTGCCCCGAG............................................................... 22 1 2 1.00 2 0 1 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCACGAG............................................................... 22 1 2 1.00 2 0 0 2 0 0 0
...............................................................................................TTCTGTACTGAGCTGCCCCGA................................................................ 21 1 2 1.00 2 0 0 2 0 0 0
..............................................................................................CTCCTGTACTGAGCTGCCCCGAGA.............................................................. 24 2 2 1.00 2 0 1 1 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCG................................................................. 18 0 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGTCCCGAGT.............................................................. 23 2 2 1.00 2 0 0 1 1 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAAA............................................................ 25 3 2 1.00 2 0 0 0 2 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGGA............................................................. 24 1 2 1.00 2 1 0 0 0 0 1
...............................................................................................TCCTGTACTGAGCTGCTCCGAGA.............................................................. 23 2 2 1.00 2 1 0 1 0 0 0
...............................................................................................TACAGTACTGAGCTGCCCCGA................................................................ 21 2 2 1.00 2 1 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCGA................................................................. 20 2 2 1.00 2 2 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCTCGAT............................................................... 22 2 2 1.00 2 0 0 2 0 0 0
...............................................................................................GCCTGTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGCGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAAT............................................................ 25 3 2 0.50 1 0 0 0 0 1 0
...............................................................................................TCCTGTACTGATCTGCCCCGA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTCCTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGATGCCCCGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTAATGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGGACTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 0 0 0 1
...............................................................................................TCCTGCACTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCTCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTGTC........................................................... 26 3 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAAG............................................................ 25 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGGC............................................................. 24 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCATGTACTGAGCTGCCCCG................................................................. 20 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAGAA............................................................. 22 2 2 0.50 1 0 0 1 0 0 0
................................................................................................CCTGTACTGAGCTGCCCCGAGG.............................................................. 22 0 2 0.50 1 0 0 0 1 0 0
................................................................................................CCTGTACTGAGCTGCCCCGAGGAT............................................................ 24 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................ACCTGTACTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCTCGA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGTGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTATTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................ATCTGTACTGAGCTGCCCCGAG............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCTTGTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
................................................................................................CCTGTACTGAGCTGCCCCGAT............................................................... 21 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAGGTT............................................................ 23 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTTCCCCGA................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCCGCTCCGA................................................................ 21 2 2 0.50 1 0 0 1 0 0 0
.............................................................................TCTGACCTCCCTGACGGG..................................................................................... 18 0 2 0.50 1 0 1 0 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGAGGTTTT.......................................................... 25 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAACTGCCCCGAGT.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................TCGGGCCAGCTCAGTACCCGGC....................... 22 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTCCCCCGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTATACTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TGTACTGAGCTGCCCCGAG............................................................... 19 0 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAG.............................................................. 23 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTATCGAGCTGCCCCGAG............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..........................................................................ACCTCTGACCTCCCTGACGGG..................................................................................... 21 0 2 0.50 1 0 0 0 0 0 1
................................................................................................CCTGTACTGAGCTGCCCCGAGGC............................................................. 23 0 2 0.50 1 0 0 0 1 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGGAA............................................................ 25 2 2 0.50 1 0 0 0 0 1 0
...............................................................................................TCATGTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGACC............................................................ 25 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAACTGCCCCGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACCGAGCTGCCCCGAGT.............................................................. 23 2 2 0.50 1 0 0 0 0 1 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAGA............................................................ 25 3 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTACCCCGA................................................................ 21 1 2 0.50 1 0 0 0 1 0 0
................................................................................................TCTGTACTGAGCTGCCCCGAGA.............................................................. 22 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCCGTACTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGTCGCCCCGA................................................................ 21 2 2 0.50 1 0 0 1 0 0 0
.................................................................................................CTGTACTGAACTGCCCCGA................................................................ 19 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCGCGAG............................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGAG............................................................. 24 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTATCGAGCTGCCCCGA................................................................ 21 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TTCTGTACTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTCAGCTGCCCCG................................................................. 20 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTTAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGACT.............................................................. 23 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................................TCGGGCCAGCTCAGTACCCGGCAT..................... 24 2 2 0.50 1 0 0 0 0 0 1
...............................................................................................TCCTGTACCGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTTCGAG............................................................... 22 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCAAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGCACTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTAGTGAGCTGCCCCG................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTATTGAGCTGCCCCG................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCTTGTACTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTGCGAG............................................................... 22 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTTTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGGCT............................................................ 25 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCCGTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCTGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACCGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TGTACTGAGCTGCCCCGAGTA............................................................. 21 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGTCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGC..................................................................... 16 0 4 0.50 2 2 0 0 0 0 0
...............................................................................................TCCTGTATTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGTCCCGAGAT............................................................. 24 3 2 0.50 1 0 0 1 0 0 0
..............................................................................................GTACAGTACTGAGCTGCCCCGAGA.............................................................. 24 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTCCCCCGAT............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGTTGCCCCGAA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................CTCCTGTACTGAGCTGCCCCG................................................................. 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGCGG.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
.........................................................................................................................................GGGCCAGCTCAGTACCCGGCG...................... 21 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTACCCCGAG............................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTTTACTGAGCTGCCCCGA................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCCGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................ACCTGTACTGAGCTGCCCCGAGA.............................................................. 23 2 2 0.50 1 0 1 0 0 0 0
............................................................................................ATCTCCTGTACTGAGCTGCCCCGAG............................................................... 25 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTCTACTGAGCTGCCCCGAGAT............................................................. 24 3 2 0.50 1 0 0 0 0 1 0
...............................................................................................TCCTGTACTCAGCTGCCCCGA................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGACCCT............................................................ 25 3 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTCCCCCGAGT.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................TACTGTACTGAGCTGCCCCGAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
................................................................................................CCTGTACTGGGCTGCCCCGAG............................................................... 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCGCGAGA.............................................................. 23 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTCCGA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAGTG............................................................. 24 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGTA............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................ATCCTGTACTGAGCTGCCCCGAGA.............................................................. 24 2 2 0.50 1 0 1 0 0 0 0
.................................................................................................CTGTACTGAGCTGCCC................................................................... 16 0 3 0.33 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAAT............................................................. 24 3 3 0.33 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTGCGAGA.............................................................. 23 3 6 0.33 2 1 1 0 0 0 0
.................................................................................................CTGTACTGAGCTGCCCTGA................................................................ 19 1 3 0.33 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCCGAAGT............................................................. 24 2 3 0.33 1 0 0 1 0 0 0
...............................................................................................TCCTGTATTCAGCTGCCCCGAG............................................................... 22 2 3 0.33 1 0 0 1 0 0 0
.................................................................................................TTGTACTGAGCTGCCCCGA................................................................ 19 1 3 0.33 1 0 0 0 0 0 1
...............................................................................................TCCTGTACTGAGCTG...................................................................... 15 0 10 0.30 3 1 2 0 0 0 0
.................................................................................................CTGTACTGAGCTGCCCCGATT.............................................................. 21 2 4 0.25 1 0 1 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCTTCGAGT.............................................................. 23 3 4 0.25 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCTGAA............................................................... 22 2 4 0.25 1 1 0 0 0 0 0
.............................................................................................CGTCTTGTACTGAGCTGCCCCT................................................................. 22 3 6 0.17 1 0 1 0 0 0 0
.................................................................................................CTGTACTGAGCTGCC.................................................................... 15 0 6 0.17 1 0 0 0 1 0 0
........................................................................................................................................CGGGGCAGCTCAGTACCAGACG...................... 22 3 8 0.13 1 1 0 0 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCTTGAGA.............................................................. 23 3 9 0.11 1 0 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCGAG................................................................ 21 3 20 0.10 2 1 0 1 0 0 0
...............................................................................................TCCTGTACTGAGCTGCCCTT................................................................. 20 2 16 0.06 1 0 1 0 0 0 0

Anti-sense strand reads

ACCCCTCGCCCGCCCCCTCCGGTAGTTCCGAGAACCCACGCCCCTCGTCGCGACCCCGAAGTCCCGGTCGAGCCTGGAGACTGGAGGGACTGCCCAGGACATGACTCGACGGGGCTCCGGGAGTGACACGGGTCGAGCCCGGTCGAGTCATGGGCCGCGCAGCCCCACCCTCAGCCGGCC

***********************************.((.....((((.(((((((((((((.(((.((((((((((....(((((.......)))))..)).))))))))))).))))))).))..))))...))))......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR066809

ovary
.............................................................................................GCAGAACATGACTCGACGGGGC................................................................. 22 2 2 167.00 334 176 158
................................................................................................GAACATGACTCGACGGGGC................................................................. 19 1 2 14.50 29 13 16
..............................................................................................TAGGACATGACTCGACGGGGC................................................................. 21 1 2 10.50 21 12 9
...............................................................................................AGGACATGACTCGACGGGGC................................................................. 20 0 2 10.50 21 7 14
...............................................................................................AGAACATGACTCGACGGGGC................................................................. 20 1 2 10.50 21 9 12
..............................................................................................CAGAACATGACTCGACGGGGC................................................................. 21 1 2 4.00 8 6 2
............................................................................................TGCAGAACATGACTCGACGGGGC................................................................. 23 3 2 3.50 7 3 4
...............................................................................................AGAACATGACTCGACGGGGCTC............................................................... 22 1 2 2.00 4 2 2
.............................................................................................ACAGAACATGACTCGACGGGGC................................................................. 22 2 2 2.00 4 2 2
.............................................................................................GCAGAACATGACTCGACGGGG.................................................................. 21 2 3 2.00 6 4 2
...............................................................................................AGGACATGACTCGACGGGGCTC............................................................... 22 0 2 1.00 2 0 2
.............................................................................................CCAGAACATGACTCGACGGGGC................................................................. 22 1 2 1.00 2 0 2
................................................................................................GAACATGACTCGACGGGGCTC............................................................... 21 1 2 1.00 2 1 1
.............................................................................................GTAGGACATGACTCGACGGGGC................................................................. 22 2 2 0.50 1 0 1
.............................................................................................CCAGACCATGACTCGACGGGGC................................................................. 22 2 2 0.50 1 0 1
.............................................................................................TCAGAACATGACTCGACGGGGC................................................................. 22 2 2 0.50 1 1 0
.............................................................................................TTAGGACATGACTCGACGGGGC................................................................. 22 2 2 0.50 1 1 0
.................................................................................................AACATGACTCGACGGGGC................................................................. 18 1 3 0.33 1 1 0
..............................................................................................TAGGACATGACTCGACGGGAC................................................................. 21 2 5 0.20 1 0 1
.............................................................................................GCAGACCATGACTCGACGGGGC................................................................. 22 3 8 0.13 1 0 1
.............................................................................................GCAGAACATGACTCGACGGGGG................................................................. 22 3 8 0.13 1 1 0
.............................................................................................GCAGAACACGACTCGACGGGGC................................................................. 22 3 9 0.11 1 1 0
.............................................................................................GCAGAACATGACTCGACGGGAC................................................................. 22 3 14 0.07 1 1 0

Generated: 09/01/2015 at 11:30 AM