ID:

ssc-mir-455

 Coordinate:

chr1:286017379-286017458 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-41.2
mature

  1. ssc-mir-455  chr1:286017390-286017411 +
  2. GL893885-2:75377-75398 +
star

  1. ssc-mir-455  chr1:286017428-286017448 +
  2. GL893885-2:75415-75435 +

Sense Strand Reads

AGTccccggcgcggggcgggcctcccccggcgagcgcccgcgcccTTCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTATGTCATCGAGGAGCTGCTGGAGCCGCTGCTGCCACCAGCGAGGAA

**********************************************.....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR139075

testes		 SRR066810

testes		 SRR1274763

ovary		 SRR139076

testes		 SRR1274764

testes
.............................................................TATGTGCCTTTGGACTACATCG................................................................................................. 22 0 2 468.00 936 421 153 239 106 4 13
.............................................................TATGTGCCTTTGGACTACATCGT................................................................................................ 23 0 2 407.50 815 446 52 285 26 4 2
...................................................................................................GCAGTCCATGGGCATATACAC............................................................ 21 0 2 401.00 802 345 395 21 21 18 2
...................................................................................................GCAGTCCATGGGCATATACACT........................................................... 22 0 2 380.00 760 188 475 15 44 35 3
...................................................................................................GCAGTCCATGGGCATATACACC........................................................... 22 1 2 242.00 484 259 150 19 37 15 4
...................................................................................................GCAGTCCACGGGCATATACACC........................................................... 22 2 2 190.50 381 207 0 174 0 0 0
...................................................................................................GCAGTCCATGGGCATATACA............................................................. 20 0 2 140.00 280 82 175 8 7 8 0
...................................................................................................GCAGTCCATGGGCATATACACA........................................................... 22 1 2 93.00 186 101 68 10 4 3 0
...................................................................................................GCAGTCCACGGGCATATACACT........................................................... 22 1 2 73.00 146 76 1 69 0 0 0
...................................................................................................GCAGTCCACGGGCATATACAC............................................................ 21 1 2 68.00 136 73 1 62 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTT.......................................................... 22 0 2 65.50 131 7 99 1 15 5 4
............................................................GTATGTGCCTTTGGACTACAT................................................................................................... 21 0 2 58.00 116 23 78 10 4 1 0
.................................................................................................ATGCAGTCCATGGGCATATACAC............................................................ 23 0 2 52.00 104 56 35 3 6 4 0
...................................................................................................GCAGTCCATGGGCATATAC.............................................................. 19 0 2 49.50 99 8 89 0 2 0 0
.................................................................................................ATGCAGTCCATGGGCATATACA............................................................. 22 0 2 43.00 86 30 47 1 3 5 0
..................................................................................................TGCAGTCCATGGGCATATACAC............................................................ 22 0 2 41.50 83 56 20 2 4 1 0
.............................................................TATGTGCCTTTGGACTACATC.................................................................................................. 21 0 2 35.00 70 21 12 14 22 0 1
...............................................................TGTGCCTTTGGACTACATCGT................................................................................................ 21 0 2 34.50 69 40 6 13 8 0 2
............................................................GTATGTGCCTTTGGACTACA.................................................................................................... 20 0 2 32.00 64 36 6 17 4 0 1
.................................................................................................ATGCAGTCCATGGGCATATAC.............................................................. 21 0 2 31.00 62 9 47 0 3 3 0
............................................................GTATGTGCCTTTGGACTACATCG................................................................................................. 23 0 2 30.50 61 8 49 1 1 2 0
.................................................................................................ATGCAGTCCATGGGCATAT................................................................ 19 0 2 28.50 57 0 56 0 0 1 0
...................................................................................................GCAGTCCATGGGCATATACACCA.......................................................... 23 2 2 28.50 57 35 21 1 0 0 0
.............................................................TATGTGCCTTTGGACTACAT................................................................................................... 20 0 2 25.50 51 18 25 4 4 0 0
............................................................GTATGTGCCTTTGGACTACATCGT................................................................................................ 24 0 2 25.50 51 5 45 1 0 0 0
...............................................................TGTGCCTTTGGACTACATCGTG............................................................................................... 22 0 2 24.50 49 19 21 5 2 2 0
.................................................................................................ATGCAGTCCACGGGCATATACAC............................................................ 23 1 2 21.00 42 26 0 16 0 0 0
...............................................................TGTGCCTTTGGACTACATCGTGT.............................................................................................. 23 1 2 21.00 42 6 29 4 0 3 0
.............................................................TATGTGCCTTTGGACTACA.................................................................................................... 19 0 2 20.50 41 19 12 6 3 0 1
...................................................................................................GCAGTCCACGGGCATATACA............................................................. 20 1 2 19.00 38 19 1 17 0 1 0
...............................................................TGTGCCTTTGGACTACATCGTGA.............................................................................................. 23 1 2 18.00 36 11 18 1 4 2 0
............................................................GTATGTGCCTTTGGACTA...................................................................................................... 18 0 2 17.50 35 28 0 7 0 0 0
...................................................................................................GCAGTCCATGGGCATATACAA............................................................ 21 1 2 16.00 32 11 19 0 0 2 0
.................................................................................................ATGCAGTCCACGGGCATATACA............................................................. 22 1 2 15.50 31 16 0 15 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGA................................................................................................ 23 1 2 15.50 31 17 4 6 4 0 0
....................................................................................................CAGTCCATGGGCATATACACT........................................................... 21 0 2 15.00 30 11 10 0 7 2 0
............................................................GTATGTGCCTTTGGACTACATA.................................................................................................. 22 1 2 14.00 28 14 12 1 1 0 0
....................................................................................................CAGTCCATGGGCATATACACCT.......................................................... 22 1 2 14.00 28 4 18 0 3 3 0
.............................................................TATGTGCCTTTGGACTACATCGTG............................................................................................... 24 0 2 12.50 25 9 11 5 0 0 0
............................................................GTATGTGCCTTTGGACTACATC.................................................................................................. 22 0 2 12.50 25 4 19 0 1 1 0
...................................................................................................GCAGTCCATGGGCATATACACTT.......................................................... 23 0 2 11.50 23 1 21 0 0 1 0
....................................................................................................CAGTCCACGGGCATATACAC............................................................ 20 1 2 11.00 22 14 0 8 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACA............................................................. 21 0 2 10.50 21 13 6 0 2 0 0
..............................................................ATGTGCCTTTGGACTACATCGT................................................................................................ 22 0 2 10.50 21 12 3 6 0 0 0
..................................................................................................TGCAGTCCACGGGCATATACAC............................................................ 22 1 2 10.50 21 14 0 7 0 0 0
....................................................................................................CAGTCCACGGGCATATACACC........................................................... 21 2 2 9.50 19 13 0 6 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACACA........................................................... 23 1 2 9.00 18 14 2 1 1 0 0
....................................................................................................CAGTCCATGGGCATATACACCA.......................................................... 22 2 2 8.50 17 6 8 0 0 3 0
....................................................................................................CAGTCCACGGGCATATACACTT.......................................................... 22 1 2 8.50 17 8 0 8 0 1 0
...................................................................................................GCAGTCCATGGGCATATACACTA.......................................................... 23 1 2 8.00 16 5 11 0 0 0 0
............................................................GTATGTGCCTTTGGACTAC..................................................................................................... 19 0 2 7.00 14 7 3 3 1 0 0
............................................................GTATGTGCCTTTGGACTACATT.................................................................................................. 22 1 2 6.50 13 2 10 1 0 0 0
....................................................................................................CAGTCCATGGGCATATACACC........................................................... 21 1 2 6.50 13 5 8 0 0 0 0
....................................................................................................CAGTCCACGGGCATATACACT........................................................... 21 1 2 6.00 12 7 0 5 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTTA......................................................... 23 1 2 5.50 11 1 10 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTTT......................................................... 23 1 2 5.50 11 0 9 0 1 1 0
....................................................................................................CAGTCCACGGGCATATACA............................................................. 19 1 2 5.00 10 7 0 3 0 0 0
..................................................................................................TGCAGTCCATGGGCATATAC.............................................................. 20 0 2 5.00 10 3 5 0 2 0 0
...................................................................................................GCAGTCCATGGGCATATACACCT.......................................................... 23 1 2 5.00 10 4 6 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGTGT.............................................................................................. 25 1 2 5.00 10 6 0 3 1 0 0
....................................................................................................CAGTCCATGGGCATATACACTA.......................................................... 22 1 2 5.00 10 3 7 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATAA.............................................................. 19 1 2 5.00 10 2 8 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATACAA............................................................ 23 1 2 5.00 10 5 4 0 0 1 0
...................................................................................................GCAGTCCATGGGCATATACATT........................................................... 22 1 2 4.50 9 0 9 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACAC............................................................ 20 0 2 4.50 9 3 4 1 1 0 0
.................................................................................................ATGCAGTCCATGGGCATATA............................................................... 20 0 2 4.50 9 0 9 0 0 0 0
..............................................................ATGTGCCTTTGGACTACATCG................................................................................................. 21 0 2 4.50 9 5 2 1 1 0 0
...................................................................................................GCAGTCCACGGGCATATAC.............................................................. 19 1 2 4.50 9 5 0 4 0 0 0
...................................................................................................GCAGTCCACGGGCATATACACCA.......................................................... 23 3 5 4.40 22 16 0 6 0 0 0
...............................................................TGTGCCTTTGGACTACA.................................................................................................... 17 0 2 3.50 7 1 6 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACA........................................................... 21 1 2 3.50 7 4 2 0 1 0 0
...................................................................................................GCCGTCCATGGGCATATACAC............................................................ 21 1 2 3.50 7 0 7 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACATC........................................................... 22 2 2 3.50 7 0 6 0 0 1 0
.................................................................................................ATGCAGTCCATGGGCATATACACA........................................................... 24 1 2 3.50 7 6 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATA............................................................... 18 0 2 3.50 7 3 4 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATACACT........................................................... 24 0 2 3.50 7 3 3 1 0 0 0
...................................................................................................GCAGTCTATGGGCATATACA............................................................. 20 1 2 3.00 6 0 6 0 0 0 0
...................................................................................................GCAGTCCACGGGCATATACACA........................................................... 22 2 2 3.00 6 4 0 2 0 0 0
...................................................................................................GCAGTCCATGGGCATATACACG........................................................... 22 1 2 3.00 6 0 5 1 0 0 0
............................................................GTATGTGCCTTTGGACTACATCGTG............................................................................................... 25 0 2 3.00 6 0 6 0 0 0 0
..................................................................................................TGCAGTCCACGGGCATATACA............................................................. 21 1 2 3.00 6 2 0 4 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACACT........................................................... 23 0 2 3.00 6 2 3 0 1 0 0
....................................................................................................CAGTCCACGGGCATATACACCA.......................................................... 22 3 7 2.71 19 14 0 5 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATAA.............................................................. 21 1 2 2.50 5 0 5 0 0 0 0
...............................................................TGTGCCTTTGGACTACATCG................................................................................................. 20 0 2 2.50 5 3 0 1 1 0 0
...................................................................................................GCCGTCCATGGGCATATACACT........................................................... 22 1 2 2.50 5 0 5 0 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACACC........................................................... 23 1 2 2.00 4 1 1 0 1 1 0
..................................................................................................TGCAGTCCACGGGCATATACACC........................................................... 23 2 2 2.00 4 0 0 4 0 0 0
.............................................................TATGTGCCTTTGGACTGCATCG................................................................................................. 22 1 2 2.00 4 3 1 0 0 0 0
................................................................................................CATGCAGTCCATGGGCATATTT.............................................................. 22 2 2 2.00 4 1 3 0 0 0 0
.............................................................TATGCGCCTTTGGACTACATCG................................................................................................. 22 1 2 2.00 4 0 2 1 1 0 0
.............................................................TATGTGCCTTTGGACTACATCT................................................................................................. 22 1 2 2.00 4 0 0 0 4 0 0
.................................................................................................ATGCAGTCCACGGGCATATACACC........................................................... 24 2 2 2.00 4 2 0 2 0 0 0
.............................................................TATGTGCCTTTGGACTACATCA................................................................................................. 22 1 2 2.00 4 3 0 1 0 0 0
...................................................................................................GCAGTCCACGGGCATATACAA............................................................ 21 2 2 2.00 4 2 0 2 0 0 0
...................................................................................................GCAGTCCATGGGCATATACAT............................................................ 21 1 2 2.00 4 1 3 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATAT.............................................................. 21 1 3 2.00 6 0 6 0 0 0 0
.................................................................................................ATGCAGTCCACGGGCATATAC.............................................................. 21 1 2 2.00 4 1 0 3 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATACT............................................................. 22 1 2 2.00 4 0 2 0 2 0 0
....................................................................................................CAGTCCACGGGCATATACACCT.......................................................... 22 2 2 2.00 4 3 0 1 0 0 0
.............................................................TATGTGCCTTTGGACT....................................................................................................... 16 0 3 1.67 5 4 0 1 0 0 0
.............................................................TATGTGTCTTTGGACTACATCG................................................................................................. 22 1 2 1.50 3 0 3 0 0 0 0
...................................................................................................GCAGGCCATGGGCATATACACT........................................................... 22 1 2 1.50 3 0 3 0 0 0 0
................................................................................................CATGCAGTCCACGGGCATATACA............................................................. 23 1 2 1.50 3 1 0 2 0 0 0
...................................................................................................GCAGTCCATGGGCATATACT............................................................. 20 1 2 1.50 3 0 3 0 0 0 0
............................................................GTATGTGCCTTTGGACTACATG.................................................................................................. 22 1 2 1.50 3 0 3 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACTCT........................................................... 22 1 2 1.50 3 0 3 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACCTT......................................................... 23 2 2 1.50 3 0 3 0 0 0 0
............................................................GTATGTGCCTTTGGACTACAC................................................................................................... 21 1 2 1.50 3 0 2 1 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATT............................................................... 20 1 2 1.50 3 0 3 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATA.................................................................................................. 21 1 2 1.50 3 1 1 0 1 0 0
................................................................................................CATGCAGTCCATGGGCATATAC.............................................................. 22 0 2 1.50 3 0 2 1 0 0 0
..............................................................ATGTGCCTTTGGACTACATCGA................................................................................................ 22 1 2 1.50 3 0 3 0 0 0 0
..................................................................................................TGCAGTCCACGGGCATATACACT........................................................... 23 1 2 1.50 3 3 0 0 0 0 0
.....................................................................................................AGTCCATGGGCATATACA............................................................. 18 0 2 1.50 3 2 0 0 0 1 0
....................................................................................................CAGTCCATGGGCATATACACG........................................................... 21 1 2 1.50 3 0 3 0 0 0 0
.............................................................TATGTGCCTTTGGACTGCATCGT................................................................................................ 23 1 2 1.50 3 0 0 2 0 1 0
...................................................................................................GCAGTCCATGGGCATATACCC............................................................ 21 1 2 1.50 3 0 3 0 0 0 0
............................................................GTATGTGCCTTTGGACTACT.................................................................................................... 20 1 2 1.50 3 3 0 0 0 0 0
.....................................................................................................AGTCCATGGGCATATACACT........................................................... 20 0 2 1.50 3 0 3 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTAA......................................................... 23 2 3 1.33 4 0 4 0 0 0 0
...................................................................................................GCAGTCTATGGGCATATACACT........................................................... 22 1 2 1.00 2 0 1 0 0 1 0
...................................................................................................GCAGCCCATGGGCATATACAC............................................................ 21 1 2 1.00 2 1 1 0 0 0 0
............................................................GTATGTGCCTTTGGAC........................................................................................................ 16 0 2 1.00 2 1 0 0 1 0 0
...................................................................................................GCAGTCCATGGGCATATACAAT........................................................... 22 1 2 1.00 2 0 1 1 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGTGA.............................................................................................. 25 1 2 1.00 2 1 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATACAC.............................................................. 19 1 3 1.00 3 0 3 0 0 0 0
...................................................................................................GTAGTCCATGGGCATATACACT........................................................... 22 1 2 1.00 2 1 1 0 0 0 0
...........................................................CGTATGTGCCTTTGGACTACAT................................................................................................... 22 1 2 1.00 2 1 1 0 0 0 0
..................................................................................................CGCAGTCCATGGGCATATACACT........................................................... 23 1 2 1.00 2 2 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCCTATACACC........................................................... 22 2 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCACGGGCATATACATT........................................................... 22 2 2 1.00 2 1 0 1 0 0 0
...................................................................................................GCAGTCCCTGGGCATATACAC............................................................ 21 1 2 1.00 2 1 1 0 0 0 0
.............................................................TATTTGCCTTTGGACTACATCGT................................................................................................ 23 1 2 1.00 2 1 1 0 0 0 0
............................................................GTATGTGCCTTTGGACTACATCGTT............................................................................................... 25 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATAG.............................................................. 19 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACCCT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0
.............................................................TATGTGCCTTTTGACTACATCGT................................................................................................ 23 1 2 1.00 2 1 0 1 0 0 0
....................................................................................................CAGTTCATGGGCATATACACTT.......................................................... 22 1 2 1.00 2 0 2 0 0 0 0
.............................................................TATGTGCCTTTGGGCTACATCGT................................................................................................ 23 1 2 1.00 2 2 0 0 0 0 0
...............................................................................................CCATGCAGTCCATGGGCATATAC.............................................................. 23 0 2 1.00 2 0 2 0 0 0 0
............................................................GTATGTGCCTTTGGACTAT..................................................................................................... 19 1 4 1.00 4 1 2 1 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATACGA............................................................ 23 2 2 1.00 2 2 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACACAA.......................................................... 23 2 4 1.00 4 2 2 0 0 0 0
...................................................................................................GCAGTCCATAGGCATATACAC............................................................ 21 1 2 1.00 2 0 1 1 0 0 0
...................................................................................................GCAGTTCATGGGCATATACAC............................................................ 21 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGGCCTATACAC............................................................ 21 1 2 1.00 2 0 2 0 0 0 0
............................................................GTATGTGCCTTTGGACT....................................................................................................... 17 0 2 1.00 2 1 0 1 0 0 0
.............................................................TATGTGCTTTTGGACTACATCG................................................................................................. 22 1 2 1.00 2 0 1 0 1 0 0
.....................................................................................................AGTCCATGGGCATATACAC............................................................ 19 0 2 1.00 2 1 0 0 0 1 0
....................................................................................................CAGTCCACGGGCATATACACA........................................................... 21 2 2 1.00 2 0 0 2 0 0 0
...................................................................................................GCAGTCCATGGGCATATAAA............................................................. 20 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACTT............................................................ 21 2 2 1.00 2 0 2 0 0 0 0
.............................................................TATGTGCCTTTGGACTACGTCG................................................................................................. 22 1 2 1.00 2 1 1 0 0 0 0
...................................................................................................GCAGGCCATGGGCATATACAC............................................................ 21 1 2 1.00 2 0 2 0 0 0 0
.................................................................................................ATGCAGTCCACGGGCATATACAA............................................................ 23 2 2 1.00 2 1 0 1 0 0 0
...................................................................................................GCAGTCCATGGGCCTATACACT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGCGCATATACACT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGCCATATACACT........................................................... 22 1 2 1.00 2 0 1 0 0 1 0
...................................................................................................GCAGTCCATGGGCATATATA............................................................. 20 1 2 1.00 2 0 2 0 0 0 0
................................................................................................CATGCAGTCCATGGGCATATA............................................................... 21 0 2 1.00 2 0 2 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACACCG.......................................................... 23 2 2 1.00 2 2 0 0 0 0 0
.............................................................TATGTGCCTTTGGACTAC..................................................................................................... 18 0 2 1.00 2 1 0 1 0 0 0
...................................................................................................GCAATCCATGGGCATATAC.............................................................. 19 1 2 1.00 2 0 2 0 0 0 0
............................................................GTATGTGCCTTTGGACTACCT................................................................................................... 21 1 2 1.00 2 0 1 0 0 1 0
.............................................................TATGTGCCTTTGGACTACATCGTT............................................................................................... 24 1 2 1.00 2 0 2 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATA................................................................. 18 0 2 1.00 2 0 2 0 0 0 0
............................................................GTATGTGCCTTTGGACTGCAT................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0
....................................................................................................CAGTCCACGGGCATATACACTC.......................................................... 22 2 2 1.00 2 1 0 1 0 0 0
.................................................................................................AAGCAGTCCATGGGCATATAC.............................................................. 21 1 2 1.00 2 0 2 0 0 0 0
..................................................................................................TACAGTCCATGGGCATATACAC............................................................ 22 1 2 1.00 2 0 2 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACA............................................................. 19 0 2 1.00 2 1 1 0 0 0 0
..........................................................................ACTACATAGTGGACGCGAGCA..................................................................................... 21 3 4 0.75 3 2 0 1 0 0 0
.................................................................................................ATGCAGTCCATGGGCATAA................................................................ 19 1 3 0.67 2 0 2 0 0 0 0
...........................................................CGTATGTGCCTTTGGACTACA.................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................ATGCGGTCCATGGGCATATAC.............................................................. 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGTGCATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
................................................................GTGCCTTTGGACTACATCGTGAA............................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0
.............................................................TATGTGCCGTTGGACTACATCGT................................................................................................ 23 1 2 0.50 1 0 0 0 1 0 0
...................................................................................................GCAGTCCATGGGCATATACACTAA......................................................... 24 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCCGTCCATGGGCATATACACTTT......................................................... 24 2 2 0.50 1 0 1 0 0 0 0
.........................................................................................................CATGGGCATATACACTT.......................................................... 17 0 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTACCTTTGGACTACATCG................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0
............................................................GTATGTGCCTTTGGACTACATCGTGGAAGCC......................................................................................... 31 0 2 0.50 1 0 0 0 1 0 0
.............................................................TATGTGCCTTTGGACTACATCGTGGAC............................................................................................ 27 1 2 0.50 1 0 0 1 0 0 0
...................................................................................................TCAGTCCACGGGCATATACACT........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACAT.......................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGAGCATATACACC........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCATAT................................................................ 17 0 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAATCCATGGGCATATACACTTT......................................................... 24 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................ACGCAGTCCATGGGCATATAC.............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCAAATACACT........................................................... 22 1 2 0.50 1 1 0 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATTGT................................................................................................ 23 1 2 0.50 1 1 0 0 0 0 0
...............................................................TGTGCCTTTGGACTGCATCGTG............................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCGTATAC.............................................................. 21 1 2 0.50 1 0 0 0 0 1 0
....................................................................................................CAGTCCACGGGCATATACACCTT......................................................... 23 3 2 0.50 1 0 0 1 0 0 0
.................................................................................................ATGCAGTCCATGGGCATACA............................................................... 20 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATATGCCTTTGGACTACATCG................................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GTAGTCCACGGGCATATACAC............................................................ 21 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACAG............................................................ 21 1 2 0.50 1 0 0 0 0 1 0
.............................................................TATGTGCCTTTGGACTATATCGT................................................................................................ 23 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................ATGCAGTCCACGCGCATATACAC............................................................ 23 2 2 0.50 1 1 0 0 0 0 0
....................................................................................................CAGGCCATGGGCATATACACTT.......................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGACCATGGGCATATACAC............................................................ 21 1 2 0.50 1 0 1 0 0 0 0
.............................................................TTTGTGCCTTTGGACTACATCG................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATCCACT........................................................... 22 1 2 0.50 1 0 0 0 1 0 0
...................................................................................................GCAGTCCGTGGGCATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTTAGGACTACATCGTGT.............................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0
..............................................................ATGTGCCTTTGGACTACAT................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGCCATATACAC............................................................ 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACACG........................................................... 23 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGAGCATATACAC............................................................ 21 1 2 0.50 1 0 0 1 0 0 0
............................................................GTATGTGCCTTTGGACTACATAA................................................................................................. 23 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCTCGGGCATATACACT........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCCGTCCATGGGCATATACACTT.......................................................... 23 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................CAGTCTATGGGCATATACACTTT......................................................... 23 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................AGCAGTCCATGGGCATATACACT........................................................... 23 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCCTGGGCATATACACC........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTATGGACTACATCG................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................ATGCAGTCCACGGGCATA................................................................. 18 1 2 0.50 1 1 0 0 0 0 0
............................................................GTATGTGCCTTTGGACTACATCT................................................................................................. 23 1 2 0.50 1 0 0 0 1 0 0
...................................................................................................GCAGTCCACGGGCATATACACTT.......................................................... 23 1 2 0.50 1 0 0 1 0 0 0
................................................................................................CATGCAGTCCACGGGCATATACAA............................................................ 24 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATAAA............................................................... 20 1 2 0.50 1 0 1 0 0 0 0
...............................................................TGTGCCTTTGGACTGCATCGTGT.............................................................................................. 23 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATCCA............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGGCCATGGGCATATACA............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATGTGCCTTTGGACTACATCAA................................................................................................ 24 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATTTGCCTTTGGACTACATCGC................................................................................................ 23 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGTGCATATACA............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCACGGGTATATAC.............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGTATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
............................................................GCATGTGCCTTTGGACTACAT................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCATGGGGATATACA............................................................. 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGTATATACAC............................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATAGGCATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTG.......................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTTCATGGGCATATACACTA.......................................................... 23 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATATGCCTTTGGACTACATCG................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCATGGGCATATCCA............................................................. 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATCCACA........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCACGGGCATATACT............................................................. 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATCCAC............................................................ 21 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGAGCATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATATGCCTTTGGACTACA.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................CTGTCCATGGGCATATACACTT.......................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATATACTT.......................................................... 23 1 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTTTGGACTACCTCGT................................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATAGGCATATACACC........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
.....................................................................................................AGTCCACGGGCATATACAC............................................................ 19 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGGGCACATACAC............................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................TCAGTCCATGGGCATATACACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGTGG.............................................................................................. 25 0 2 0.50 1 0 0 0 1 0 0
.............................................................TATGTGCATTTGGACTACATCGT................................................................................................ 23 1 2 0.50 1 1 0 0 0 0 0
.............................................................TATGGGCCTTTGGACTACATCGT................................................................................................ 23 1 2 0.50 1 0 0 1 0 0 0
...................................................................................................GCAGTCCACGCGCATATACACT........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TGCAGTCCATGGGCATATACT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
.............................................................TATGTGCCTTAGGACTACATCG................................................................................................. 22 1 2 0.50 1 0 0 1 0 0 0
............................................................GTATGTGCCTTTGGACTACAAT.................................................................................................. 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCCTGGGCATATACACT........................................................... 22 1 2 0.50 1 0 0 0 0 1 0
...................................................................................................GTAGTCCATGGGCATATACACA........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCCGTCCATGGGCATATACACC........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGC................................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................CAGTCCACGGGCATATACACTTT......................................................... 23 2 2 0.50 1 0 0 1 0 0 0
...................................................................................................GCAGTCTATGGGCATATAC.............................................................. 19 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACGCT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCGGTCCATGGGCATATACAC............................................................ 21 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................ATGCAGTCCCTGGGCATATAC.............................................................. 21 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTTGT........................................................ 24 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATGTGCCATTGGACTACAT................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGGCCATGGGCATATACACC........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
............................................................ATTTGTGCCTTTGGACTACATCGTGA.............................................................................................. 26 3 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCATGAGCATATACA............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAATCCATGGGCATATACAC............................................................ 21 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTC.......................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.............................................................TCTGTGCCTTTGGACTACATCG................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCCGCCCATGGGCATATACACT........................................................... 22 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATGTACAC............................................................ 21 1 2 0.50 1 1 0 0 0 0 0
......................................................................................................GTCCATGGGCATATACAC............................................................ 18 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................AGTCCATGGGCATATAC.............................................................. 17 0 2 0.50 1 0 1 0 0 0 0
............................................................GTATGTGACTTTGGACTACAT................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGTGCATATAC.............................................................. 19 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................TGCAGTCCATGAGCATATACA............................................................. 21 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTTC......................................................... 23 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATGTGCCCTTGGACTACATCGC................................................................................................ 24 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCCTTGGACTACATCG................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
..............................................................CTGTGCCTTTGGACTACATCGT................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................ATGTAGTCCATGGGCATATACA............................................................. 22 1 2 0.50 1 0 1 0 0 0 0
............................................................GTATGCGCCTTTGGACTACAT................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATACACAG.......................................................... 23 2 2 0.50 1 0 1 0 0 0 0
.............................................................TATGTGCCTTTGGACTACATCGAT............................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0
...................................................................................................GCAGTCCATGGGCATATACGA............................................................ 21 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GCAGTCCACGGGCGTATACACC........................................................... 22 3 2 0.50 1 1 0 0 0 0 0
............................................................GGATGTGCCTTTGGACTACATCG................................................................................................. 23 1 2 0.50 1 0 1 0 0 0 0
................................................................................................CATGCAGTCCATGGGCATATACA............................................................. 23 0 2 0.50 1 0 0 0 1 0 0
................................................................................................CATGCAGTCCACGGTCATATACACC........................................................... 25 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACT............................................................. 19 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................CAGTCCATGGGCATATACACTCA......................................................... 23 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................CGCAGTCCATGGGCATATACACC........................................................... 23 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TGCAGTCCATGGGCATAAAC.............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................GCAGTCCATGGGCATATATACT........................................................... 22 1 2 0.50 1 0 1 0 0 0 0

Anti-sense strand reads

TCAGGGGggGgGggggGgggGGtGGGGGggGgTgGgGGGgGgGGGAAGGGACCGCACTCCCATACACGGAAACCTGATGTAGCACCTTCGGTCGTGGTACGTCAGGTACCCGTATATGTGAACGGAGTTCCGGATACAGTAGCTCCTCGACGACCTCGGCGACGACGGTGGTCGCTCCTT

*********************************************.....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:22 AM