ID:

ssc-mir-423

Coordinate:

chr12:48287019-48287098 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-41.0 -40.7

Sense Strand Reads

CCAGGATGGAAGCCCGAAGTTTGAGGGAGAAACTTGTGAGGAAATAAAGAAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCGCGCTTGAGTTTCTCCCCGGTTGGATGCTTTCAGGGGTAATGAGAAG

********************************************...((.((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))).)).....***********************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
SRR139075

testes
SRR1274763

ovary
SRR139076

testes
SRR1274764

testes
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGT.............................................................. 23 0 1 18235.00 18235 9466 6838 933 747 106 145
...........................................................TGAGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 0 1 9300.00 9300 1550 1494 5088 231 529 408
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 24 0 1 3520.00 3520 1846 1395 137 92 14 36
...........................................................TGAGGGGCAGAGAGCGAGACTT................................................................................................... 22 0 1 1657.00 1657 254 229 969 80 47 78
...........................................................TGAGGGGCAGAGAGCGAGACT.................................................................................................... 21 0 1 1264.00 1264 236 225 495 198 16 94
...........................................................TGAGGGGCAGAGAGCGAGACTTTT................................................................................................. 24 0 1 1208.00 1208 181 186 628 33 90 90
...........................................................TGAGGGGCAGAGAGCGAGA...................................................................................................... 19 0 1 578.00 578 49 36 473 4 8 8
...........................................................TGAGGGGCAGAGAGCGAGAC..................................................................................................... 20 0 1 542.00 542 57 40 399 16 14 16
...............................................................................................AGCTCGGTCTGAGGCCCCTCAG............................................................... 22 0 1 533.00 533 183 154 143 38 14 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTT............................................................. 24 1 1 530.00 530 183 121 112 89 8 17
...........................................................TGAGGGGCAGAGAGCGAGACTTA.................................................................................................. 23 1 1 480.00 480 18 10 406 11 23 12
...............................................................................................AGCTCGGTCTGAGGCC..................................................................... 16 0 1 340.00 340 203 118 1 16 0 2
...............................................................................................AGCTCGGTCTGAGGC...................................................................... 15 0 3 287.00 861 531 322 3 4 0 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTA............................................................. 24 1 1 277.00 277 41 15 144 59 13 5
...............................................................................................AGCTCGGTCTGAGGCCCCTCA................................................................ 21 0 1 269.00 269 125 90 41 5 8 0
..............................................................................................AAGCTCGGTCTGAGGC...................................................................... 16 0 1 245.00 245 150 94 0 1 0 0
................................................................................................GCTCGGTCTGAGGCCCCTCAGT.............................................................. 22 0 1 203.00 203 123 59 15 5 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCA................................................................ 22 0 1 192.00 192 89 69 28 3 2 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGA.............................................................. 23 1 1 174.00 174 26 8 45 71 0 24
...........................................................TGAGGGGCAGAGAGCGAGACTTTA................................................................................................. 24 1 1 155.00 155 15 11 107 4 14 4
............................................................GAGGGGCAGAGAGCGAGACTTT.................................................................................................. 22 0 1 153.00 153 7 9 127 1 9 0
..............................................................................................AAGCTCGGTCTGAGGCC..................................................................... 17 0 1 136.00 136 73 60 0 2 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAG............................................................... 23 0 1 130.00 130 41 34 47 4 1 3
..............................................................................................AAGCTCGGTCTGAGGCCCCTC................................................................. 21 0 1 127.00 127 54 55 11 3 2 2
..............................................................................................AAGCTCGGTCTGAGGCCCCT.................................................................. 20 0 1 118.00 118 66 41 4 5 0 2
..............................................................................................AAGCTCGGTCTGAGGCCCCTCT................................................................ 22 1 1 113.00 113 53 59 0 1 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTC................................................................. 20 0 1 112.00 112 49 40 16 3 1 3
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAA............................................................ 25 2 1 109.00 109 44 21 31 6 5 2
...............................................................................................AGCTCGGTCTGAGGCCCCT.................................................................. 19 0 1 104.00 104 51 37 2 12 0 2
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAT............................................................ 25 1 1 86.00 86 17 6 47 3 13 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTT................................................................................................ 25 1 1 84.00 84 19 15 20 3 11 16
...........................................................TGAGGGGCAGAGAGCGAGACTTAA................................................................................................. 24 2 1 73.00 73 6 4 57 0 5 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTT............................................................. 25 1 1 72.00 72 32 21 8 7 2 2
...............................................................................................AGCTCGGTCTGAGGCCCCTCT................................................................ 21 1 1 72.00 72 32 36 2 1 1 0
...........................................................TGAGGGGCAGAGAGCGAAA...................................................................................................... 19 1 1 70.00 70 2 0 67 1 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTTT............................................................ 25 1 1 68.00 68 34 14 18 0 2 0
...........................................................TGAGGGGCAGAGAGCGAGACTTAT................................................................................................. 24 1 1 67.00 67 4 1 48 1 6 7
...........................................................TGAGGGGCAGAGAGCGAGACTTTAT................................................................................................ 25 2 1 64.00 64 1 6 28 3 19 7
...........................................................TGAGGGGCAGAGAGCGAGACA.................................................................................................... 21 1 2 63.00 126 22 21 72 6 3 2
..............................................................................................CAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 56.00 56 33 22 0 0 0 1
...............................................................................................AGCTCGGTCTGAGGCCCC................................................................... 18 0 1 55.00 55 13 12 21 6 2 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGAA............................................................. 24 2 1 55.00 55 26 9 15 3 1 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAT............................................................... 22 1 1 54.00 54 23 8 14 6 3 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCATT.............................................................. 23 1 1 54.00 54 35 15 2 1 1 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCATT.............................................................. 24 1 1 52.00 52 32 17 1 1 0 1
...........................................................TGAGGGGCAGAGAGCGAG....................................................................................................... 18 0 2 49.00 98 3 6 88 0 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAT............................................................... 23 1 1 49.00 49 19 14 14 2 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAA............................................................... 22 1 1 48.00 48 16 8 23 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTAA................................................................................................ 25 2 1 42.00 42 3 3 20 1 12 3
..............................................................................................AAGCTCGGTCTGAGGCCCCTT................................................................. 21 1 1 42.00 42 21 18 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCC.................................................................... 17 0 1 41.00 41 18 18 2 2 0 1
....................................................................................................GGTCTGAGGCCCCTCAGT.............................................................. 18 0 1 38.00 38 3 0 35 0 0 0
............................................................GAGGGGCAGAGAGCGAGACTTTT................................................................................................. 23 0 1 34.00 34 1 1 29 0 3 0
............................................................GAGGGGCAGAGAGCGAGACTT................................................................................................... 21 0 1 33.00 33 4 1 28 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAA............................................................... 23 1 1 33.00 33 11 3 17 0 2 0
..............................................................................................AAGCTCGGTCTGAGG....................................................................... 15 0 3 32.00 96 68 28 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCTCTCAGT.............................................................. 23 1 1 32.00 32 12 9 10 1 0 0
...........................................................TGAGGGGCAGAGAGCGAGACG.................................................................................................... 21 1 1 31.00 31 1 1 29 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCTT............................................................... 23 2 1 31.00 31 16 15 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCTTCAGT.............................................................. 23 1 1 30.00 30 11 3 14 0 2 0
...........................................................TGAGGGGCAGAGAGCGAGCCTTT.................................................................................................. 23 1 1 29.00 29 1 2 23 0 3 0
...............................................................................................AGCTCGGTCTGAGGCTCCTCAGT.............................................................. 23 1 1 29.00 29 10 7 11 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTT................................................................. 20 1 1 28.00 28 8 18 1 1 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGA.............................................................. 24 1 1 27.00 27 6 1 5 13 0 2
...........................................................TGAGGGGCAGAGAGCGAGAT..................................................................................................... 20 1 1 27.00 27 1 0 24 2 0 0
...........................................................TGAGGGGCAGAGAGCGA........................................................................................................ 17 0 2 27.00 54 16 12 26 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCC.................................................................... 18 0 1 26.00 26 17 9 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTAA.................................................................................................. 23 2 1 26.00 26 0 1 22 0 1 2
...........................................................TGAGGGGCAGAGAGCGAGACTA................................................................................................... 22 1 1 25.00 25 1 0 21 2 1 0
...........................................................TGCGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 25.00 25 0 1 23 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAT.............................................................. 23 1 1 25.00 25 6 4 12 2 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTTT................................................................ 22 2 1 24.00 24 11 10 3 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCC................................................................... 19 0 1 23.00 23 13 5 4 0 0 1
...........................................................TGAGGGGCAGAGAGCGAGAA..................................................................................................... 20 1 5 23.00 115 3 5 95 1 3 8
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGC.............................................................. 23 1 1 22.00 22 10 9 3 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTAT.................................................................................................. 23 1 1 22.00 22 1 1 17 2 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAAT........................................................... 26 2 1 21.00 21 13 5 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAAA........................................................... 26 3 1 21.00 21 11 5 4 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTTA............................................................ 25 2 1 20.00 20 5 2 8 2 3 0
...............................................................................................GGCTCGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 20.00 20 8 11 0 1 0 0
............................................................GAGGGGCAGAGAGCGAGACTTA.................................................................................................. 22 1 1 19.00 19 0 0 18 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAA.............................................................. 23 2 1 19.00 19 14 2 2 1 0 0
...............................................................................................AGTTCGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 19.00 19 11 4 3 0 1 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTA............................................................. 25 1 1 19.00 19 5 1 5 4 3 1
...........................................................TGAGGGGCAGAGAGCTAGACTTT.................................................................................................. 23 1 1 18.00 18 0 1 15 0 2 0
...........................................................TGAGGGGCAGAGAGCGAGACTTG.................................................................................................. 23 1 1 18.00 18 0 0 15 1 2 0
............................................................GAGGGGCAGAGAGCGAGACT.................................................................................................... 20 0 1 17.00 17 0 3 13 1 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTTT............................................................ 26 1 1 17.00 17 7 8 1 1 0 0
.................................................................................................CTCGGTCTGAGGCCCCTCAGT.............................................................. 21 0 1 16.00 16 10 6 0 0 0 0
...............................................................................................AGCTCGGTCCGAGGCCCCTCAGT.............................................................. 23 1 1 16.00 16 10 5 0 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTTTT........................................................... 26 1 1 16.00 16 7 9 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTTAT........................................................... 26 2 1 15.00 15 10 5 0 0 0 0
.............................................................AGGGGCAGAGAGCGAGACTTT.................................................................................................. 21 0 1 15.00 15 1 1 12 0 1 0
....................................................................................................GGTCTGAGGCCCCTCAGTAT............................................................ 20 1 1 14.00 14 0 0 13 0 1 0
...............................................................................................AGCTTGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 14.00 14 6 8 0 0 0 0
..........................................................CTGAGGGGCAGAGAGCGAGACTTT.................................................................................................. 24 0 1 13.00 13 1 3 6 0 3 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGAT............................................................. 24 2 1 13.00 13 4 2 5 1 0 1
...........................................................TGAGGGGCAGAGCGCGAGACTTT.................................................................................................. 23 1 1 13.00 13 0 1 11 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCCGT.............................................................. 23 1 1 13.00 13 6 2 4 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGG.............................................................. 23 1 1 13.00 13 7 3 2 1 0 0
...........................................................TGAAGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 12.00 12 5 2 4 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGACAA................................................................................................... 22 2 3 12.00 36 2 0 32 0 0 2
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAAA.............................................................. 24 2 1 12.00 12 7 3 2 0 0 0
...............................................................................................AGCTCGGTCTAAGGCCCCTCAGT.............................................................. 23 1 1 12.00 12 7 5 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTA................................................................................................ 25 1 1 12.00 12 0 0 7 0 2 3
............................................................................................ATTAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 26 2 1 11.00 11 5 6 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGAAT.................................................................................................... 21 1 1 11.00 11 0 1 9 0 0 1
...........................................................TGAGGGGCAGAGAGCGAGGCTTT.................................................................................................. 23 1 1 11.00 11 0 0 11 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTTAGT.............................................................. 23 1 1 11.00 11 4 5 1 1 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAAT.............................................................. 24 1 1 11.00 11 3 6 1 1 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTTT............................................................................................... 26 1 1 11.00 11 2 5 1 0 0 3
..............................................................................................AAGCTCGGTCTGAGGCCCCTCTTT.............................................................. 24 2 1 11.00 11 4 7 0 0 0 0
...............................................................................................AGCTCGGCCTGAGGCCCCTCAGT.............................................................. 23 1 1 10.00 10 4 5 1 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTC.................................................................................................. 23 1 1 10.00 10 1 0 9 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCATA.............................................................. 23 2 1 10.00 10 6 1 3 0 0 0
...............................................................................................AGCCCGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 10.00 10 5 3 1 0 1 0
...........................................................TGAGGGGCAGATAGCGAGACTTT.................................................................................................. 23 1 1 10.00 10 0 0 10 0 0 0
...............................................................................................AGCTCAGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 10.00 10 7 2 0 1 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTATT........................................................... 26 1 1 10.00 10 7 2 0 1 0 0
...............................................................................................AGCTCGGTCTGAGGTCCCTCAGT.............................................................. 23 1 1 10.00 10 4 2 4 0 0 0
...........................................................TGAGGGGCAGAGGGCGAGACTTT.................................................................................................. 23 1 1 9.00 9 0 1 6 0 1 1
...............................................................................................AGCTCGTTCTGAGGCCCCTCAGT.............................................................. 23 1 1 9.00 9 4 1 4 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTAT............................................................ 26 1 1 9.00 9 3 1 1 1 3 0
............................................................GAGGGGCAGAGAGCGAGAC..................................................................................................... 19 0 1 9.00 9 0 1 8 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAG.............................................................. 23 2 1 9.00 9 1 0 8 0 0 0
............................................................GAGGGGCAGAGAGCGAGA...................................................................................................... 18 0 1 9.00 9 2 1 6 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTAT................................................................ 22 2 1 9.00 9 3 3 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCGGT.............................................................. 23 1 1 9.00 9 4 5 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCT.................................................................... 18 1 1 8.00 8 5 3 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCAT.................................................................. 20 1 1 8.00 8 1 2 5 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCCCAGT.............................................................. 23 1 1 8.00 8 5 2 1 0 0 0
...............................................................................................AGCTCGGTCTGCGGCCCCTCAGT.............................................................. 23 1 1 8.00 8 3 1 3 0 1 0
...............................................................................................AGCTCGGGCTGAGGCCCCTCAGT.............................................................. 23 1 1 8.00 8 2 1 4 0 1 0
...........................................................TGAGGGGCAGAGAGCAAGACTTT.................................................................................................. 23 1 1 8.00 8 0 2 6 0 0 0
...............................................................................................ATCTCGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 8.00 8 5 2 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCACAGT.............................................................. 23 1 1 8.00 8 4 3 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCTTTCAGT.............................................................. 23 2 1 8.00 8 1 4 3 0 0 0
...............................................................................................AGCTCGGTCTGAGACCCCTCAGT.............................................................. 23 1 1 8.00 8 4 4 0 0 0 0
.............................................................AGGGGCAGAGAGCGAGACTTTT................................................................................................. 22 0 1 7.00 7 4 0 2 1 0 0
...........................................................TGAGGGGCAGAGAGCGATACTTT.................................................................................................. 23 1 1 7.00 7 1 0 6 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCCGT.............................................................. 24 1 1 7.00 7 4 3 0 0 0 0
...........................................................TGAGGGGCAGGGAGCGAGACTTT.................................................................................................. 23 1 1 7.00 7 0 0 7 0 0 0
...............................................................................................AGCTCGGTTTGAGGCCCCTCAGT.............................................................. 23 1 1 7.00 7 3 4 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTCT.................................................................................................. 23 1 1 7.00 7 1 1 5 0 0 0
..............................................................................................AAGCTTGGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 7.00 7 2 4 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTC............................................................. 24 0 1 7.00 7 4 2 0 1 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTG............................................................. 24 1 1 7.00 7 3 1 1 1 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTAA............................................................ 26 2 1 7.00 7 4 1 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCA.................................................................. 19 1 1 7.00 7 2 2 2 1 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTAAA................................................................................................ 25 3 1 7.00 7 1 1 4 0 0 1
...........................................................CGAGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 7.00 7 1 1 4 0 1 0
...........................................................TGGGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 7.00 7 1 1 4 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCACT.............................................................. 23 1 1 7.00 7 1 6 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAGA........................................................... 26 3 1 7.00 7 4 0 0 2 1 0
...........................................................TGAGGGTCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 7.00 7 0 1 6 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACCTT.................................................................................................. 23 1 1 7.00 7 1 1 5 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTGA................................................................................................. 24 2 1 7.00 7 0 1 5 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGCCTTTT................................................................................................. 24 1 1 7.00 7 0 0 6 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGAAA............................................................ 25 3 1 7.00 7 0 0 6 1 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAAA............................................................. 24 3 1 7.00 7 1 0 4 2 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTAA................................................................ 21 1 1 7.00 7 0 0 7 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGAA............................................................. 25 2 1 7.00 7 5 1 0 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGACTAG.................................................................................................. 23 2 1 6.00 6 0 0 5 0 1 0
............................................................GAGGGGCAGAGAGCGAGACTTTA................................................................................................. 23 1 1 6.00 6 0 0 4 0 2 0
.............................................................................................CAAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 25 1 1 6.00 6 3 3 0 0 0 0
...............................................................................................AGCTCGGTCTGATGCCCCTCAGT.............................................................. 23 1 1 6.00 6 1 4 0 1 0 0
....................................................................................................GGTCTGAGGCCCCTCAG............................................................... 17 0 1 6.00 6 0 0 6 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTG................................................................................................. 24 1 1 6.00 6 0 0 6 0 0 0
...............................................................................................AGCTCGGTCTGAGGCTCCTCAG............................................................... 22 1 1 6.00 6 1 1 3 0 1 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAG............................................................ 25 2 1 6.00 6 0 1 2 0 3 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCTT............................................................... 22 2 2 6.00 12 6 5 1 0 0 0
...........................................................TGAGGGGCAGTGAGCGAGACTTT.................................................................................................. 23 1 1 6.00 6 0 0 6 0 0 0
...........................................................TGAGGGGCAGCGAGCGAGACTTT.................................................................................................. 23 1 1 6.00 6 0 0 6 0 0 0
..............................................................................................TAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 6.00 6 2 3 1 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCATA.............................................................. 24 2 1 6.00 6 2 2 2 0 0 0
...............................................................................................AGCTCGGTCTTAGGCCCCTCAGT.............................................................. 23 1 1 6.00 6 2 3 1 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCTA............................................................... 23 2 1 6.00 6 3 2 1 0 0 0
...............................................................................................AGCTCGGTCTGAAGCCCCTCAGT.............................................................. 23 1 1 6.00 6 2 3 1 0 0 0
...........................................................TGAGTGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 6.00 6 1 0 3 0 2 0
...........................................................TGAGGGGCGGAGAGCGAGACTTT.................................................................................................. 23 1 1 6.00 6 2 1 2 0 0 1
..............................................................................................AAGCTCGTTCTGAGGCCCCTCAGT.............................................................. 24 1 1 6.00 6 1 3 1 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTAT............................................................................................... 26 1 1 6.00 6 2 0 3 0 0 1
....................................................................................................GGTCTGAGGCCCCTCAGTA............................................................. 19 1 3 5.33 16 0 0 16 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTAAA............................................................................................... 26 3 1 5.00 5 2 0 2 0 0 1
...............................................................................................AGCTCGGTCTGACGCCCCTCAGT.............................................................. 23 1 1 5.00 5 2 0 0 2 1 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTC................................................................................................ 25 0 1 5.00 5 1 0 3 0 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTTAT........................................................... 27 2 1 5.00 5 2 2 1 0 0 0
...........................................................TGAGGGGCAGAGAGCGCGACTTT.................................................................................................. 23 1 1 5.00 5 0 1 4 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGATT.................................................................................................... 21 1 1 5.00 5 0 0 4 0 0 1
...........................................................TGAGGAGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 5.00 5 2 0 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCTCCTCAGTA............................................................. 24 2 1 5.00 5 0 0 4 0 1 0
....................................................................................................GGTCTGAGGCCCCTCAGTTT............................................................ 20 1 1 5.00 5 0 0 5 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTTA................................................................ 22 1 1 5.00 5 1 1 3 0 0 0
................................................................................................GCTCGGTCTGAGGCCCCTCAG............................................................... 21 0 1 5.00 5 3 2 0 0 0 0
...........................................................TAAGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 5.00 5 1 0 4 0 0 0
...............................................................................................AGCTCGGTCTGAGTCCCCTCAGT.............................................................. 23 1 1 5.00 5 1 2 2 0 0 0
...........................................................TGAGAGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 5.00 5 0 0 5 0 0 0
...............................................................................................AGCACGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 5.00 5 2 3 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACAAT.................................................................................................. 23 2 1 5.00 5 2 0 1 1 0 1
...............................................................................................AGCTCGGTCTCAGGCCCCTCAGT.............................................................. 23 1 1 5.00 5 2 2 1 0 0 0
...........................................................TGAGGGGCAGAGAGTGAGACTTT.................................................................................................. 23 1 1 5.00 5 0 2 2 0 0 1
.............................................................................................AAAGCTCGGTCTGAGGC...................................................................... 17 0 1 5.00 5 5 0 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCT................................................................... 19 1 2 5.00 10 5 4 1 0 0 0
...........................................................................................ATTAAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 27 3 1 5.00 5 3 2 0 0 0 0
...............................................................................................AACTCGGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 5.00 5 4 1 0 0 0 0
...............................................................................................AGCTCGCTCTGAGGCCCCTCAGT.............................................................. 23 1 1 5.00 5 2 2 1 0 0 0
..............................................................................................AAGTTCGGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 5.00 5 1 2 2 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGT...................................................................................................... 19 1 5 4.60 23 2 0 19 2 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTTT................................................................ 21 2 2 4.50 9 5 4 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGATTTT.................................................................................................. 23 1 1 4.00 4 0 0 1 0 2 1
..............................................................................................AAGCTCGGTCTGAGGCCCCTAA................................................................ 22 1 1 4.00 4 1 0 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAAC........................................................... 26 3 1 4.00 4 1 1 0 0 1 1
...............................................................................................AGCTCGGTCTGAGGCCCCTGA................................................................ 21 1 1 4.00 4 1 0 3 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTATT................................................................................................ 25 2 1 4.00 4 1 0 2 0 0 1
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGAAT............................................................ 25 2 1 4.00 4 2 0 0 1 0 1
...........................................................TGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 59 0 1 4.00 4 0 0 0 3 0 1
...........................................................TGAGGGGCAAAGAGCGAGACTTT.................................................................................................. 23 1 1 4.00 4 1 0 3 0 0 0
............................................................GAGGGGCAGAGAGCGAGACTTTTT................................................................................................ 24 1 1 4.00 4 0 0 2 0 2 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTGT............................................................ 25 1 1 4.00 4 3 0 0 1 0 0
...........................................................TGAGGGGCAGAGAGCGAGCCTT................................................................................................... 22 1 1 4.00 4 0 1 3 0 0 0
...........................................................TGAGGGGCCGAGAGCGAGACTTT.................................................................................................. 23 1 1 4.00 4 0 0 4 0 0 0
............................................................................................TTAAGCTCGGTCTGAGGCCCCTCAGT.............................................................. 26 2 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGGCCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 4.00 4 0 1 3 0 0 0
...........................................................TGAGGGGCAGAGAGCGAAACTTT.................................................................................................. 23 1 1 4.00 4 2 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCTTT.............................................................. 23 2 2 4.00 8 4 4 0 0 0 0
....................................................................................................GGTCTGAGGCCCCTCAGTT............................................................. 19 1 2 4.00 8 0 0 8 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCTCCTCAGT.............................................................. 24 1 1 4.00 4 2 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAC............................................................... 22 1 1 4.00 4 2 2 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTAT................................................................ 21 2 1 4.00 4 1 1 1 1 0 0
...........................................................AGAGGGGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 4.00 4 1 1 2 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCTAT.............................................................. 24 2 1 4.00 4 1 2 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGGA............................................................. 24 2 1 4.00 4 0 0 4 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTA................................................................. 20 1 1 4.00 4 1 3 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCTCCTCAG............................................................... 23 1 1 4.00 4 0 0 4 0 0 0
..........................................................CTGAGGGGCAGAGAGCGAGACTT................................................................................................... 23 0 1 4.00 4 3 1 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGCT............................................................. 24 2 1 4.00 4 0 2 2 0 0 0
...............................................................................................AGCTCGATCTGAGGCCCCTCAGT.............................................................. 23 1 1 4.00 4 2 2 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGGGACTTT.................................................................................................. 23 1 1 4.00 4 0 0 4 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTATT............................................................................................... 26 2 1 4.00 4 0 0 3 0 0 1
.............................................................................................AAAGCTCGGTCTGAGGCCCCTCT................................................................ 23 1 1 4.00 4 2 2 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACGA................................................................................................... 22 2 4 3.75 15 2 0 13 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCA..................................................................... 17 1 6 3.33 20 12 8 0 0 0 0
...........................................................TGATGGGCAGAGAGCGAGACTT................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCG................................................................ 22 1 1 3.00 3 1 1 0 1 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGAGA............................................................ 26 3 1 3.00 3 2 1 0 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTTAA............................................................................................... 26 2 1 3.00 3 0 2 0 0 0 1
..............................................................................................AAGCTCGGTCTGAGGCCCTT.................................................................. 20 1 1 3.00 3 2 1 0 0 0 0
...............................................................................................AGCTCGGTCTGCGGCCCCTCAGTT............................................................. 24 2 1 3.00 3 0 1 2 0 0 0
..............................................................................................AAGCTCGGTCTGGGGCCCCTCAGT.............................................................. 24 1 1 3.00 3 2 1 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTAAT............................................................... 23 2 1 3.00 3 0 3 0 0 0 0
.............................................................................................AAAGCTCGGTCTGAGGCC..................................................................... 18 0 1 3.00 3 1 2 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTAC............................................................ 25 2 1 3.00 3 2 0 1 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTTAAC............................................................................................... 26 3 1 3.00 3 0 0 3 0 0 0
...........................................................TGAGGGGCTGAGAGCGAGACTTT.................................................................................................. 23 1 1 3.00 3 0 0 3 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCGGT.............................................................. 24 1 1 3.00 3 3 0 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTAAT............................................................... 22 2 1 3.00 3 2 0 0 1 0 0
..............................................................................................AAGCTCGGTCCGAGGCCCCTCAGT.............................................................. 24 1 1 3.00 3 2 0 0 1 0 0
..............................................................................................AATCTCGGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 3.00 3 2 1 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGTCCCCTCAGT.............................................................. 24 1 1 3.00 3 2 0 1 0 0 0
..............................................................................................AAGCTCAGTCTGAGGCCCCTCAGT.............................................................. 24 1 1 3.00 3 2 1 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCAGTAAT........................................................... 27 2 1 3.00 3 2 1 0 0 0 0
.............................................................................................AAAGCTCGGTCTGAGGCCCCTCA................................................................ 23 0 1 3.00 3 2 1 0 0 0 0
...........................................................TGAGGGGCAGAGAGTGAGACTTTT................................................................................................. 24 1 1 3.00 3 1 0 2 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCTTCAGT.............................................................. 24 1 1 3.00 3 2 1 0 0 0 0
..........................................................CTGAGGGGCAGAGAGCGAGACT.................................................................................................... 22 0 1 3.00 3 1 0 2 0 0 0
...........................................................TGAGGGGTAGAGAGCGAGACTTTT................................................................................................. 24 1 1 3.00 3 0 0 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCATAA............................................................. 24 3 1 3.00 3 1 0 1 0 1 0
...........................................................TGAGTGGCAGAGAGCGAGACTTTT................................................................................................. 24 1 1 3.00 3 0 0 3 0 0 0
...........................................................TGAGGGGCAGAGAGCGAGACTTGT................................................................................................. 24 1 1 3.00 3 0 0 3 0 0 0
...............................................................................................AGCTCGGTCTGAGGCTCCTCAGTAT............................................................ 25 2 1 3.00 3 0 0 3 0 0 0
..............................................................................................AAGCTCGGCCTGAGGCCCCTCAGT.............................................................. 24 1 1 3.00 3 0 3 0 0 0 0
...........................................................TGAGGCGCAGAGAGCGAGACTTT.................................................................................................. 23 1 1 3.00 3 0 0 0 0 2 1
...........................................................TGAGGGGCAGAGAGCAAGACTTTT................................................................................................. 24 1 1 3.00 3 1 0 2 0 0 0
...........................................................TGAGGGGCAGAGACCGAGACTTT.................................................................................................. 23 1 1 3.00 3 1 0 1 0 0 1
...............................................................................................AGCTCGGTCTGAGGCTTCTCAG............................................................... 22 2 1 3.00 3 0 0 3 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCTGA.............................................................. 24 2 1 3.00 3 0 0 3 0 0 0
...........................................................TAAGGGGCAGAGAGCGAGACTTTT................................................................................................. 24 1 1 3.00 3 0 0 3 0 0 0
............................................................TAGGGGCAGAGAGCGAGACTTT.................................................................................................. 22 1 1 3.00 3 0 0 3 0 0 0
...............................................................................................AGCTCGGTCAGAGGCCCCTCAGT.............................................................. 23 1 1 3.00 3 1 1 1 0 0 0
..........................................................CTGAGGGGCAGAGAGCGAGAC..................................................................................................... 21 0 1 3.00 3 1 0 2 0 0 0
...............................................................................................AGCTCTGTCTGAGGCCCCTCAGT.............................................................. 23 1 1 3.00 3 2 0 0 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGATTT................................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0
...............................................................................................AGCTCGGTCTGTGGCCCCTCAGT.............................................................. 23 1 1 3.00 3 2 1 0 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTA................................................................. 21 1 1 3.00 3 1 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCATCAGT.............................................................. 23 1 1 3.00 3 1 0 2 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTCATTT............................................................. 25 2 1 3.00 3 3 0 0 0 0 0
...............................................................................................AGCTCGGTCTGGGGCCCCTCAGT.............................................................. 23 1 1 3.00 3 0 2 1 0 0 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTTAGT.............................................................. 24 1 1 3.00 3 1 2 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAGA............................................................. 24 3 2 2.50 5 1 0 3 1 0 0
...........................................................TGAGGGGCAGAGAGCG......................................................................................................... 16 0 2 2.50 5 2 0 2 0 1 0
..............................................................................................AAGCTCGGTCTGAGGCCCCTTTT............................................................... 23 3 2 2.50 5 3 1 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCAT.................................................................. 19 1 2 2.50 5 0 0 4 0 1 0
...........................................................TGAGGGGCAGAGAGCGAGACGT................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTAG................................................................ 21 2 1 2.00 2 1 1 0 0 0 0
.................................................................................................CTCGGTCTGAGGCCCCTCAGTTT............................................................ 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................TGAGGGGCATAGAGCGAGACTTT.................................................................................................. 23 1 1 2.00 2 1 0 1 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCTCTCAG............................................................... 22 1 1 2.00 2 0 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAGTTTA........................................................... 26 2 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGCTCGGTCTGAGGCCCCTCAAAG............................................................. 24 3 1 2.00 2 0 0 2 0 0 0
...........................................................TGAGGGGCAGAGAGGGAGACTTT.................................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0
...............................................................................................AGCTCGGTCTGAGGCTTCTCAGT.............................................................. 23 2 1 2.00 2 0 0 2 0 0 0

Anti-sense strand reads

GGTCCTACCTTCGGGCTTCAAACTCCCTCTTTGAACACTCCTTTATTTCTTTCAATCCGACTCCCCGTCTCTCGCTCTGAAAAGATAAAAGGTTTTCGAGCCAGACTCCGGGGAGTCAGAACGAAGGATGGGGCGCGAACTCAAAGAGGGGCCAACCTACGAAAGTCCCCATTACTCTTC

***********************************************...((.((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))).)).....********************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
.............................................................................................TTTCGAGCCAGACTCCGGGGAGT................................................................ 23 0 1 9.00 9 6 3
.............................................................ACCCCGTCTCTCGCTCTGA.................................................................................................... 19 1 1 1.00 1 1 0
.......................................................TACGACTCCCCGTCTCTCGCTCTGA.................................................................................................... 25 1 1 1.00 1 1 0
........................................................TTGACTCCCCGTCTCTCGCTCTGA.................................................................................................... 24 2 1 1.00 1 0 1
.........................................................TTACTCCCCGTCTCTCGCTCTGA.................................................................................................... 23 2 2 0.50 1 0 1
........................................................TTGACTCCCCGTCTCTCGCTCTG..................................................................................................... 23 2 2 0.50 1 0 1
.....TACCGTCGGGCTTCAAA.............................................................................................................................................................. 17 1 4 0.25 1 0 1

Generated: 09/01/2015 at 11:24 AM