ID:ssc-mir-383 |
Coordinate:chr17:2603744-2603825 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
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|
| -36.3 | -36.0 | -36.0 |
 |
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GTTTGATGAGCCTGCATAATTTATCAAGACACTTCAGAATCTCCACGTCACCTGCTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTAGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGAGCAAGTGTCCTAGCCTTTTACCTCATGAGACCTTGTGTGTCCATCCAGTAGGTCCC
***********************************.............(((.(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..))))).)))..............*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139076 testes |
SRR139075 testes |
SRR1274764 testes |
SRR066810 testes |
SRR066809 ovary |
SRR1274763 ovary |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................AGATCAGAAGGTGATTGTGGCT.................................................................................................... | 22 | 0 | 1 | 536.00 | 536 | 293 | 213 | 23 | 5 | 1 | 1 |
| ............................................................AGATCAGAAGGTGATTGTGGCTT................................................................................................... | 23 | 0 | 1 | 177.00 | 177 | 93 | 83 | 1 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTAT.................................................................................................. | 24 | 1 | 1 | 85.00 | 85 | 65 | 19 | 1 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTT.................................................................................................. | 24 | 0 | 1 | 67.00 | 67 | 45 | 22 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTA................................................................................................... | 23 | 1 | 1 | 57.00 | 57 | 33 | 24 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTAA.................................................................................................. | 24 | 2 | 1 | 30.00 | 30 | 26 | 4 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCA.................................................................................................... | 22 | 1 | 1 | 30.00 | 30 | 13 | 17 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTA.................................................................................................. | 24 | 1 | 1 | 23.00 | 23 | 19 | 4 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGG...................................................................................................... | 20 | 0 | 1 | 18.00 | 18 | 6 | 8 | 0 | 4 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGC..................................................................................................... | 22 | 0 | 1 | 11.00 | 11 | 5 | 6 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCAA................................................................................................... | 23 | 2 | 1 | 10.00 | 10 | 7 | 2 | 0 | 1 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGC..................................................................................................... | 21 | 0 | 1 | 10.00 | 10 | 6 | 3 | 0 | 1 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCAT................................................................................................... | 23 | 1 | 1 | 9.00 | 9 | 2 | 7 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGG...................................................................................................... | 21 | 0 | 1 | 9.00 | 9 | 3 | 6 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCT.................................................................................................... | 23 | 0 | 1 | 8.00 | 8 | 4 | 3 | 1 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGACTGTGGCT.................................................................................................... | 22 | 1 | 1 | 8.00 | 8 | 0 | 0 | 0 | 3 | 5 | 0 |
| .............................................................GATCAGAAGGTGATTGTGGCT.................................................................................................... | 21 | 0 | 1 | 7.00 | 7 | 1 | 6 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCTT................................................................................................... | 24 | 0 | 1 | 6.00 | 6 | 3 | 2 | 1 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGA..................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 2 | 2 | 0 | 2 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTTT................................................................................................. | 25 | 1 | 1 | 5.00 | 5 | 4 | 1 | 0 | 0 | 0 | 0 |
| .................................................................AGAAGGTGATTGTGGCT.................................................................................................... | 17 | 0 | 1 | 5.00 | 5 | 1 | 3 | 0 | 0 | 0 | 1 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTTAA................................................................................................ | 26 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGACTGTGGCT.................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 0 | 0 | 0 | 1 | 3 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCTA................................................................................................... | 24 | 1 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGCGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCA.................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 1 | 3 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCAA................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGGGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCG.................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGGGATTGTGGCTT................................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATTAGAAGGTGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .............................................................GATCAGAAGGTGATTGTGGCTTT.................................................................................................. | 23 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................GATCAGAAGGTGATTGTGGCTAT.................................................................................................. | 23 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGACTGTGG...................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGA..................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGCGATTGTGGCTAT.................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGAA.................................................................................................... | 22 | 2 | 4 | 2.00 | 8 | 0 | 1 | 0 | 6 | 1 | 0 |
| .............................................................GATCAGAAGGTGATTGTGGCTAA.................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTTA................................................................................................. | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .............................................................GATCAGAAGGTGACTGTGGCTT................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 1 | 0 |
| ............................................................AGATCAGAAGGCGATTGTGGCTTT.................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGCGGCT.................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCTTA.................................................................................................. | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTAAA................................................................................................. | 25 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTTATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGGTTGTGGCTTT.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGAGATTGTGGCTAA.................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGACTGTGGCTT................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................AGAAGGTGATTGTGGCTAT.................................................................................................. | 19 | 1 | 2 | 1.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGGTTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATTAGAAGGTGATTGTGGCTTT.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGTTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGGGATTGTGGCTAA.................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................GATCAGAAGGTGATTGTGGCTT................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGCAGGTGATTGTGGCTTTA................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGCGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTG....................................................................................................... | 19 | 0 | 2 | 1.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTATA................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ATATCAGAAGGTGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATT.......................................................................................................... | 16 | 0 | 4 | 1.00 | 4 | 1 | 3 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGTAGGTGATTGTGGCTTT.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGCGATTGTGGCTTT.................................................................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGGGATTGTGGCT.................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGAT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGGGATTGTGGCTT................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGAGTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGGTTGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCAT................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTC................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATCGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGGGATCGTGGCTT................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTAG.................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGCGGCTTA.................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCGGAAGGTGATTGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGCTTT................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGAGATTGTGG...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGCTCAGAAGGTGATTGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGACTGTGG...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTATT................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGACGGTGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTG......................................................................................................... | 17 | 0 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGGAGGTGATTGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTAC.................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGTGGCTTT.................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ATATCAGAAGGTGATTGTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTTAT................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTTTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGTTGATTGTGGCT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTTTGGCTT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................AAGATCAGAAGGTGATTGTGGCTA................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATT.......................................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGACTGTGGCAA................................................................................................... | 24 | 3 | 3 | 0.67 | 2 | 0 | 0 | 0 | 1 | 1 | 0 |
| ............................................................AGATCAGAAGGTGATTGTTGCT.................................................................................................... | 22 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGACTGT........................................................................................................ | 19 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCCA................................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGGGATTGTGGCTTAA................................................................................................. | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGCTGA.................................................................................................. | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGACTGTGGCTA................................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............................................................AGATCAGAAGGTGATTGTGGT..................................................................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGCTTGTGG...................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGGGGCT.................................................................................................... | 22 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGACCAGAAGGTGATTGTGGCTA................................................................................................... | 23 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGCTCAGAAGGCGATTGTGGCTA................................................................................................... | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGATTGGGGCTT................................................................................................... | 23 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATCAGAAGGTGATTGGGGCA.................................................................................................... | 23 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................AGATCCGAAGGTGATTGTGT...................................................................................................... | 20 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CAGATTAGAAGGTGACTGTGG...................................................................................................... | 21 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ............................................................AGATCAGGAGGGGATTGTGGCT.................................................................................................... | 22 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................AGAAGGTGATTGTGG...................................................................................................... | 15 | 0 | 10 | 0.20 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ............................................................AGATCAGAAGGTGACTGTGGCAA................................................................................................... | 23 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
|
CAAACTACTCGGACGTATTAAATAGTTCTGTGAAGTCTTAGAGGTGCAGTGGACGAGGAGTCTAGTCTTCCACTAACACCGAAACCCATCTATAATTAGTCGGTGTCGTGACGGACCAGTCTTTCTCGTTCACAGGATCGGAAAATGGAGTACTCTGGAACACACAGGTAGGTCATCCAGGG
***********************************.............(((.(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..))))).)))..............*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR066810 testes |
|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................GGAACACACGGGCAGGTAATCCA... | 23 | 3 | 5 | 0.20 | 1 | 1 | 0 |
| ................................................GTGGAAGAGGCGTCTAGTCT.................................................................................................................. | 20 | 2 | 11 | 0.09 | 1 | 0 | 1 |
Generated: 09/01/2015 at 11:29 AM