ID:

ssc-mir-378-1

 Coordinate:

chr2:157640353-157640432 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.6 -49.6 -49.3
mature

  1. ssc-mir-378-2  chr12:38396743-38396764 +
  2. ssc-mir-378-1  chr2:157640401-157640422 +
star

Sense Strand Reads

gtgagagccccgcggccggtacaggaccacgcagccagtgggtgacagagccacccagggctcctgactccaggtcctgtgtgttgcctggaaatagcactggacttggagtcagaaggcctgcgtggagtcgccttcgccgctctctggctgggtgaccccggagccagccctttggac

*********************************************..((.((((.((((.((.((((((((((((((.(((((((.......)))).))).)))))))))))))).)).)))).))))..))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR066809

ovary		 SRR139075

testes		 SRR1274763

ovary		 SRR139076

testes		 SRR1274764

testes
..................................................................................................ACTGGACTTGGAGTCAGAAGGC............................................................ 22 0 2 382551.50 765103 400188 362300 1189 1034 233 159
..................................................................................................ACTGGACTTGGAGTCAGAAGGCA........................................................... 23 1 3 91191.33 273574 146314 126364 527 170 159 40
..................................................................................................ACTGGACTTGGAGTCAGAAGG............................................................. 21 0 2 69287.50 138575 73346 64093 749 219 116 52
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAT.......................................................... 24 1 1 22929.00 22929 12031 10671 153 19 52 3
...................................................................................................CTGGACTTGGAGTCAGAAGGC............................................................ 21 0 2 12158.00 24316 11377 12813 40 69 7 10
..................................................................................................ACTGGACTTGGAGTCAGAAGGA............................................................ 22 1 3 10801.67 32405 17120 14904 140 181 25 35
..................................................................................................ACTGGACTTGGAGTCAGAAGGCT........................................................... 23 1 3 8292.33 24877 13031 11442 164 155 28 57
..................................................................................................ACTGGACTTGGAGTCAGAAG.............................................................. 20 0 6 5789.00 34734 18064 16519 115 27 1 8
..................................................................................................ACTGGACTTGGAGTCAGAAGGCG........................................................... 23 1 2 4730.50 9461 4952 4500 1 7 0 1
...................................................................................................CTGGACTTGGAGTCAGAAGGCA........................................................... 22 1 3 2872.33 8617 3987 4566 30 21 6 7
..................................................................................................ACTGGACTTGGAGTCAGAAGGT............................................................ 22 1 7 2177.29 15241 8193 7009 21 12 5 1
..................................................................................................ACTGGACTTGGAGTCGGAAGGC............................................................ 22 1 2 2129.00 4258 2181 2048 7 6 3 13
...................................................................................................CTGGACTTGGAGTCAGAAGG............................................................. 20 0 2 1357.50 2715 1319 1381 8 5 2 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCT........................................................... 22 1 3 1354.67 4064 1894 2063 31 59 4 13
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAA.......................................................... 24 2 3 1118.67 3356 1776 1546 25 3 6 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCC........................................................... 23 0 2 1002.00 2004 1028 971 3 1 1 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCAT.......................................................... 23 1 1 772.00 772 361 391 12 5 3 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCGT.......................................................... 24 1 1 699.00 699 359 334 4 0 2 0
..................................................................................................ACTGGACTTGGAGTCGGAAGG............................................................. 21 1 2 666.00 1332 707 620 3 1 0 1
.................................................................................................CACTGGACTTGGAGTCAGAAGGC............................................................ 23 0 2 659.50 1319 609 707 0 2 1 0
..................................................................................................GCTGGACTTGGAGTCAGAAGGC............................................................ 22 1 2 526.00 1052 518 526 6 0 0 2
..................................................................................................ACTGGACTTGGAGTCAGAAGGCATT......................................................... 25 2 1 481.00 481 260 205 4 5 3 4
..................................................................................................ACTGGACTTGGAGTCGGAAGGCA........................................................... 23 2 3 463.67 1391 714 647 17 2 11 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGC............................................................ 22 1 2 419.00 838 408 425 5 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGAA........................................................... 23 2 7 416.43 2915 1466 1396 18 26 3 6
..................................................................................................ACTGGACTTGGGGTCAGAAGGC............................................................ 22 1 2 413.00 826 405 417 4 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCC........................................................... 22 0 2 330.00 660 316 338 1 5 0 0
............................................................CTCCTGACTCCAGGTCCTGTGT.................................................................................................. 22 0 1 301.00 301 139 159 0 2 1 0
..................................................................................................ACTGGACTTGGAGTCAGA................................................................ 18 0 8 284.50 2276 1157 1102 8 9 0 0
....................................................................................................TGGACTTGGAGTCAGAAGGC............................................................ 20 0 2 244.50 489 225 263 1 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAGGCA........................................................... 24 1 2 191.00 382 175 206 1 0 0 0
..................................................................................................ACTGGACTTGGAGGCAGAAGGC............................................................ 22 1 2 177.00 354 193 157 1 0 3 0
..................................................................................................ACCGGACTTGGAGTCAGAAGGC............................................................ 22 1 2 173.00 346 190 155 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCTT.......................................................... 24 1 2 165.00 330 159 127 35 5 3 1
..................................................................................................ACTGGACTTGGAGTTAGAAGGC............................................................ 22 1 2 159.50 319 166 151 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAGGCT........................................................... 23 2 3 157.00 471 247 214 5 0 1 4
..................................................................................................ACTAGACTTGGAGTCAGAAGGC............................................................ 22 1 2 153.00 306 151 155 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGGAGGC............................................................ 22 1 2 146.00 292 143 146 3 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCG........................................................... 22 1 2 144.50 289 134 153 1 0 0 1
.................................................................................................CACTGGACTTGGAGTCAGAAGG............................................................. 22 0 2 142.50 285 150 134 0 1 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGTA........................................................... 23 2 9 140.11 1261 711 541 5 2 2 0
..................................................................................................ACTGGGCTTGGAGTCAGAAGGC............................................................ 22 1 3 140.00 420 199 214 5 0 2 0
..................................................................................................ACTGGACTTGGCGTCAGAAGGC............................................................ 22 1 2 139.50 279 124 149 6 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGA............................................................ 21 1 6 130.00 780 386 391 1 2 0 0
..................................................................................................ACTGGATTTGGAGTCAGAAGGC............................................................ 22 1 2 120.50 241 127 111 3 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCCA.......................................................... 23 1 2 116.00 232 119 112 1 0 0 0
..................................................................................................ATTGGACTTGGAGTCAGAAGGC............................................................ 22 1 3 115.67 347 172 171 4 0 0 0
..................................................................................................ACTGGACTTGGAGTCCGAAGGC............................................................ 22 1 2 109.00 218 100 114 4 0 0 0
..................................................................................................TCTGGACTTGGAGTCAGAAGGC............................................................ 22 1 2 105.50 211 132 79 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGGCA........................................................... 23 2 3 104.67 314 150 164 0 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGCA........................................................... 23 2 3 99.33 298 167 129 2 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAG.............................................................. 19 0 6 93.67 562 268 292 0 1 0 1
..................................................................................................GCTGGACTTGGAGTCAGAAGGCA........................................................... 23 2 4 92.50 370 195 174 0 1 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGG............................................................. 21 1 2 87.50 175 86 87 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCGA.......................................................... 24 2 3 87.00 261 134 126 0 1 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAGGCAT.......................................................... 24 2 1 86.00 86 45 38 2 0 1 0
..................................................................................................ACTGGACTTGGAGACAGAAGGC............................................................ 22 1 2 84.50 169 96 73 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAAAAGGC............................................................ 22 1 2 84.00 168 86 81 0 1 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGG............................................................ 22 1 2 83.50 167 89 77 1 0 0 0
..................................................................................................ACTGGACCTGGAGTCAGAAGGC............................................................ 22 1 3 83.33 250 128 122 0 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAGG............................................................. 21 1 3 81.00 243 115 124 3 1 0 0
..................................................................................................ACTGGACTTGGAATCAGAAGGC............................................................ 22 1 3 77.00 231 119 112 0 0 0 0
..................................................................................................ACTGGACTCGGAGTCAGAAGGC............................................................ 22 1 5 69.00 345 186 158 1 0 0 0
..................................................................................................ACTGGACTTTGAGTCAGAAGGC............................................................ 22 1 2 67.50 135 51 82 2 0 0 0
..................................................................................................ACTGGACTTAGAGTCAGAAGGC............................................................ 22 1 4 65.50 262 147 114 0 1 0 0
..................................................................................................ACTGGACTTGGAGTCAGAA............................................................... 19 0 7 65.00 455 231 217 5 2 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCAA.......................................................... 23 2 4 58.25 233 93 113 17 2 7 1
...................................................................................................CTGGACTTGGAGTCAGAAGGCTT.......................................................... 23 1 2 58.00 116 32 58 20 6 0 0
..................................................................................................ACTGGACTTGGTGTCAGAAGGC............................................................ 22 1 2 58.00 116 51 64 1 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGG............................................................. 21 1 2 57.00 114 60 52 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAATGC............................................................ 22 1 2 57.00 114 55 57 2 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGT............................................................ 21 1 7 56.86 398 200 197 1 0 0 0
............................................................CTCCTGACTCCAGGTCCTGTG................................................................................................... 21 0 1 55.00 55 27 28 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAG.............................................................. 20 1 6 53.50 321 162 155 1 2 1 0
..................................................................................................ACTGGACTTGGACTCAGAAGGC............................................................ 22 1 2 52.50 105 54 51 0 0 0 0
....................................................................................................TGGACTTGGAGTCAGAAGGCA........................................................... 21 1 4 51.50 206 116 90 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCTGAAGGC............................................................ 22 1 2 51.00 102 60 40 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGCAGGC............................................................ 22 1 3 49.33 148 77 65 5 0 1 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCCT.......................................................... 24 0 1 49.00 49 21 26 1 1 0 0
..................................................................................................ACTGGACTTGGAGTCATAAGGC............................................................ 22 1 2 48.00 96 38 54 4 0 0 0
..................................................................................................ACTGGACTTGGATTCAGAAGGC............................................................ 22 1 2 43.50 87 41 46 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAG.......................................................... 24 2 5 43.40 217 102 110 2 1 1 1
..................................................................................................ACTGGACTTGGAGTCAGAAGGCCA.......................................................... 24 1 2 43.00 86 47 39 0 0 0 0
..................................................................................................ACTGGACTTGAAGTCAGAAGGC............................................................ 22 1 4 42.00 168 89 78 1 0 0 0
..................................................................................................ACTGGACTTGGAGGCAGAAGGCA........................................................... 23 2 4 40.25 161 76 85 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGACGGC............................................................ 22 1 3 40.00 120 64 51 3 1 1 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAAT......................................................... 25 3 4 36.75 147 81 66 0 0 0 0
..................................................................................................ACTGGACTTCGAGTCAGAAGGC............................................................ 22 1 2 36.00 72 40 32 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCACAAGGC............................................................ 22 1 3 35.67 107 54 52 0 0 1 0
..................................................................................................ACTGGACATGGAGTCAGAAGGC............................................................ 22 1 2 35.50 71 38 33 0 0 0 0
...................................................................................................CTGGACTTGGAGTCGGAAGGC............................................................ 21 1 3 35.33 106 51 52 0 0 1 2
..................................................................................................ACAGGACTTGGAGTCAGAAGGC............................................................ 22 1 3 34.00 102 52 50 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCCT.......................................................... 23 0 1 34.00 34 16 18 0 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAGGCAT.......................................................... 25 1 1 33.00 33 10 23 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGGCAT.......................................................... 24 2 1 33.00 33 22 11 0 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAGGCAT.......................................................... 24 2 1 33.00 33 12 21 0 0 0 0
..................................................................................................ACTCGACTTGGAGTCAGAAGGC............................................................ 22 1 2 32.50 65 32 32 1 0 0 0
..................................................................................................ACTTGACTTGGAGTCAGAAGGC............................................................ 22 1 2 32.00 64 23 41 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAG................................................................. 17 0 10 31.20 312 137 174 0 1 0 0
..................................................................................................ACTGGACTTGGCGTCAGAAGGCA........................................................... 23 2 3 30.67 92 45 44 3 0 0 0
..................................................................................................ACTGGTCTTGGAGTCAGAAGGC............................................................ 22 1 2 29.50 59 37 20 1 0 1 0
.............................................................TCCTGACTCCAGGTCCTGTGT.................................................................................................. 21 0 1 29.00 29 10 19 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAGGA............................................................ 22 2 4 28.75 115 50 63 0 2 0 0
..................................................................................................ACTGGCCTTGGAGTCAGAAGGC............................................................ 22 1 2 28.50 57 36 15 5 0 1 0
..................................................................................................ACCGGACTTGGAGTCAGAAGG............................................................. 21 1 2 28.50 57 29 27 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAACGC............................................................ 22 1 2 28.50 57 30 27 0 0 0 0
...............................................................................................ATTACTGGACTTGGAGTCAGAAGGC............................................................ 25 2 4 27.75 111 51 60 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCATA......................................................... 25 2 3 26.67 80 49 31 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCTTT......................................................... 25 2 3 26.67 80 41 35 3 0 1 0
..................................................................................................ACTGGACTTGGAGTCAGTAGGC............................................................ 22 1 2 26.50 53 29 24 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAAG......................................................... 25 2 2 26.50 53 25 28 0 0 0 0
..................................................................................................ACTGAACTTGGAGTCAGAAGGC............................................................ 22 1 5 26.40 132 71 61 0 0 0 0
..................................................................................................ACTGGACTTGGAGTTAGAAGGCA........................................................... 23 2 4 25.75 103 46 55 0 0 1 1
..................................................................................................ACTGGACTTGGAGTCGGAAGGCG........................................................... 23 2 3 25.67 77 38 38 1 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCGT.......................................................... 23 1 1 25.00 25 11 11 0 0 3 0
..................................................................................................ACTGGACTTGGAGTCAGAAAGC............................................................ 22 1 5 25.00 125 66 59 0 0 0 0
..................................................................................................ACTGGACTTGCAGTCAGAAGGC............................................................ 22 1 3 25.00 75 35 40 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCGTT......................................................... 25 2 1 24.00 24 13 11 0 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGCAT.......................................................... 24 2 1 23.00 23 12 11 0 0 0 0
..................................................................................................CCTGGACTTGGAGTCAGAAGGC............................................................ 22 1 3 22.67 68 34 34 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCATT......................................................... 24 2 1 22.00 22 9 9 2 2 0 0
..................................................................................................TCTGGACTTGGAGTCAGAAGGCA........................................................... 23 2 4 21.75 87 52 35 0 0 0 0
..................................................................................................ACCGGACTTGGAGTCAGAAGGCA........................................................... 23 2 6 21.33 128 65 63 0 0 0 0
..................................................................................................ACTGGACTTTGAGTCAGAAGGCA........................................................... 23 2 3 21.00 63 29 34 0 0 0 0
..................................................................................................ATTGGACTTGGAGTCAGAAGGCA........................................................... 23 2 6 20.67 124 75 45 3 0 1 0
....................................................................................................TGGACTTGGAGTCAGAAGGCAT.......................................................... 22 1 1 20.00 20 8 12 0 0 0 0
..................................................................................................ACTGGGCTTGGAGTCAGAAGGCA........................................................... 23 2 7 19.86 139 75 63 1 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAGGCT........................................................... 24 1 2 19.50 39 23 16 0 0 0 0
..................................................................................................ACTGGAGTTGGAGTCAGAAGGC............................................................ 22 1 2 19.50 39 22 17 0 0 0 0
..................................................................................................ACTGGACTTGGCGTCAGAAGG............................................................. 21 1 2 19.50 39 18 18 3 0 0 0
..................................................................................................ACTGGACTTGGAGTCCGAAGGCA........................................................... 23 2 3 19.00 57 19 38 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCTA.......................................................... 24 2 3 18.33 55 19 32 3 0 1 0
..................................................................................................ACTGGACTTGGAGTGAGAAGGC............................................................ 22 1 2 18.00 36 23 13 0 0 0 0
..................................................................................................ACTGGACTTGGAGTAAGAAGGC............................................................ 22 1 2 18.00 36 20 16 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCGGAAGGC............................................................ 22 2 2 18.00 36 22 14 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGTT........................................................... 23 2 14 17.86 250 137 112 1 0 0 0
..................................................................................................AGTGGACTTGGAGTCAGAAGGC............................................................ 22 1 3 17.67 53 34 17 2 0 0 0
..................................................................................................ACTGGAATTGGAGTCAGAAGGC............................................................ 22 1 2 17.00 34 5 29 0 0 0 0
..................................................................................................ACTGGACCTGGAGTCAGAAGGCA........................................................... 23 2 5 16.60 83 42 41 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAAAAGG............................................................. 21 1 2 16.50 33 21 12 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGATGGC............................................................ 22 1 3 16.33 49 27 21 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGGAGG............................................................. 21 1 3 16.33 49 27 22 0 0 0 0
..................................................................................................ACTAGACTTGGAGTCAGAAGGCA........................................................... 23 2 6 16.17 97 59 38 0 0 0 0
....................................................................................................TGGACTTGGAGTCAGAAGG............................................................. 19 0 5 16.00 80 40 38 2 0 0 0
..................................................................................................ACTGGACTTGGAATCAGAAGGCA........................................................... 23 2 4 16.00 64 33 31 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAGGT............................................................ 22 2 8 15.75 126 62 62 0 1 0 1
.................................................................................................CACTGGACTTGGAGTCAGAAGGA............................................................ 23 1 3 15.67 47 24 23 0 0 0 0
..................................................................................................ACTGGACTTGGAGGCAGAAGGCAT.......................................................... 24 2 1 15.00 15 5 9 1 0 0 0
...................................................................................................CTGGACTTGGAGTCGGAAGGCT........................................................... 22 2 7 15.00 105 46 53 3 2 0 1
..................................................................................................ACTGGACTTGGAGGCAGAAGG............................................................. 21 1 3 15.00 45 22 21 2 0 0 0
..................................................................................................ACTGGGCTTGGAGTCAGAAGG............................................................. 21 1 5 14.80 74 33 35 3 0 3 0
..................................................................................................ACTGGACTTGAAGTCAGAAGGCA........................................................... 23 2 5 14.60 73 35 38 0 0 0 0
..................................................................................................TCTGGACTTGGAGTCAGAAGG............................................................. 21 1 2 14.50 29 17 12 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCCGAAGG............................................................. 21 1 2 14.50 29 14 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCTGAAGG............................................................. 21 1 2 14.50 29 21 7 1 0 0 0
..................................................................................................ACTGTACTTGGAGTCAGAAGGC............................................................ 22 1 4 14.25 57 25 31 1 0 0 0
....................................................................................................TGGACTTGGAGTCAGAAGGCT........................................................... 21 1 5 14.20 71 33 38 0 0 0 0
..................................................................................................ACTGGACTTGGTGTCAGAAGG............................................................. 21 1 2 14.00 28 13 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCATTT........................................................ 26 3 1 14.00 14 7 3 2 0 2 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGAAT.......................................................... 24 2 3 14.00 42 18 24 0 0 0 0
...................................................................................................CTGGACTTGGGGTCAGAAGGC............................................................ 21 1 2 13.50 27 12 14 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGCC............................................................ 22 1 5 13.40 67 31 36 0 0 0 0
..................................................................................................ACTGGACTTGGACTCAGAAGGCA........................................................... 23 2 3 13.33 40 24 16 0 0 0 0
..................................................................................................ACTGGACTTGGTGTCAGAAGGCA........................................................... 23 2 3 13.33 40 21 19 0 0 0 0
..................................................................................................ACTGGACTCGGAGTCAGAAGGCA........................................................... 23 2 9 13.11 118 54 63 1 0 0 0
............................................................CTCCTGACTCCAGGTCCTGT.................................................................................................... 20 0 1 13.00 13 5 7 0 1 0 0
..................................................................................................ACTGGACTTAGAGTCAGAAGGCA........................................................... 23 2 7 12.86 90 47 42 0 0 1 0
..................................................................................................ACTGGACTTGGAGTTAGAAGG............................................................. 21 1 5 12.80 64 36 27 1 0 0 0
.................................................................................................AACTGGACTTGGAGTCAGAAGGC............................................................ 23 1 3 12.67 38 18 19 1 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCTTT......................................................... 24 2 3 12.00 36 8 15 11 1 1 0
..................................................................................................ACTGGACTTGGAGTCAGAATG............................................................. 21 1 2 12.00 24 10 14 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGGAGGCA........................................................... 23 2 9 12.00 108 61 47 0 0 0 0
..................................................................................................ACTGGACTTAGAGTCAGAAGGCAT.......................................................... 24 2 1 12.00 12 4 8 0 0 0 0
..................................................................................................ACTGGACTTGGCGTCAGAAGGCAT.......................................................... 24 2 1 12.00 12 8 3 1 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAGGCT........................................................... 23 2 3 11.67 35 16 19 0 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAG.............................................................. 21 0 5 11.60 58 23 34 0 1 0 0
................................................................................................TCACTGGACTTGGAGTCAGAAGGC............................................................ 24 1 2 11.50 23 9 14 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAAAAGGCA........................................................... 23 2 6 11.17 67 31 35 0 0 1 0
..................................................................................................ACTAGACTTGGAGTCAGAAGG............................................................. 21 1 4 11.00 44 31 13 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGAG........................................................... 23 2 5 11.00 55 22 28 1 3 0 1
..................................................................................................ACTGGACCTGGAGTCAGAAGG............................................................. 21 1 4 11.00 44 29 15 0 0 0 0
..................................................................................................ACTTGACTTGGAGTCAGAAGG............................................................. 21 1 2 11.00 22 7 15 0 0 0 0
..................................................................................................ACTGGACTCGGAGTCAGAAGG............................................................. 21 1 6 11.00 66 33 31 2 0 0 0
..................................................................................................ACTGGACTTGGAGACAGAAGG............................................................. 21 1 2 10.50 21 12 9 0 0 0 0
..................................................................................................ACCGGACTTGGAGTCAGAAGGCAT.......................................................... 24 2 1 10.00 10 5 5 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCACAAGGCA........................................................... 23 2 4 9.75 39 24 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCATAAGGCA........................................................... 23 2 3 9.67 29 11 18 0 0 0 0
..................................................................................................ACTGGACTTCGAGTCAGAAGGCA........................................................... 23 2 3 9.67 29 15 13 0 0 1 0
..................................................................................................ACTGGATTTGGAGTCAGAAGGCA........................................................... 23 2 7 9.57 67 43 24 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGGA............................................................ 22 2 4 9.50 38 19 19 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAACGCA........................................................... 23 2 3 9.33 28 11 16 1 0 0 0
..................................................................................................ACTGGACTTTGAGTCAGAAGG............................................................. 21 1 3 9.00 27 14 13 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGGCG........................................................... 23 2 2 9.00 18 6 12 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCATAAGG............................................................. 21 1 2 9.00 18 11 7 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAAGT........................................................ 26 3 3 9.00 27 11 16 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCATC......................................................... 25 2 2 9.00 18 9 9 0 0 0 0
..................................................................................................ACAGGACTTGGAGTCAGAAGGCA........................................................... 23 2 5 8.80 44 24 20 0 0 0 0
..................................................................................................ACTGGACTTGGATTCAGAAGGCA........................................................... 23 2 4 8.75 35 18 16 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCTGAAGGCA........................................................... 23 2 4 8.75 35 24 11 0 0 0 0
..................................................................................................AATGGACTTGGAGTCAGAAGGC............................................................ 22 1 7 8.71 61 30 31 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGGA........................................................... 23 2 4 8.50 34 17 17 0 0 0 0
...................................................................................................CCGGACTTGGAGTCAGAAGGC............................................................ 21 1 2 8.50 17 6 11 0 0 0 0
..................................................................................................ACTGGACTTGGAGACAGAAGGCA........................................................... 23 2 8 8.50 68 29 39 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAGGCT........................................................... 23 2 3 8.33 25 12 12 0 0 1 0
..................................................................................................ATTGGACTTGGAGTCAGAAGGCAT.......................................................... 24 2 2 8.00 16 6 9 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAATGCA........................................................... 23 2 4 8.00 32 13 17 2 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAGGCG........................................................... 23 2 2 8.00 16 9 7 0 0 0 0
..................................................................................................ACGGGACTTGGAGTCAGAAGGC............................................................ 22 1 3 7.67 23 16 7 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCAGAAG.............................................................. 20 1 6 7.67 46 20 26 0 0 0 0
..................................................................................................ACTGGTCTTGGAGTCAGAAGGCA........................................................... 23 2 3 7.67 23 8 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGACGG............................................................. 21 1 3 7.67 23 10 11 2 0 0 0
..................................................................................................ACTGGACTTGGATTCAGAAGG............................................................. 21 1 3 7.67 23 8 15 0 0 0 0
..................................................................................................ACTGGACTTGCAGTCAGAAGGCA........................................................... 23 2 4 7.50 30 17 13 0 0 0 0
...................................................................................................CTGGACTTGGAGTCGGAAGGCA........................................................... 22 2 4 7.50 30 15 14 0 0 0 1
..................................................................................................ACTGGACTTGGAGTCAGAAGGCTAT......................................................... 25 3 6 7.33 44 19 21 4 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGATGGCA........................................................... 23 2 4 7.25 29 14 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGCAGGCA........................................................... 23 2 6 7.17 43 22 19 1 0 1 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCCATT........................................................ 25 3 5 7.00 35 13 22 0 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAG.............................................................. 20 1 7 7.00 49 23 24 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGAC........................................................... 23 1 2 7.00 14 4 10 0 0 0 0
..................................................................................................ATTGGACTTGGAGTCAGAAGG............................................................. 21 1 7 6.86 48 30 18 0 0 0 0
..................................................................................................ACAGGACTTGGAGTCAGAAGG............................................................. 21 1 4 6.75 27 12 15 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGC............................................................. 21 1 6 6.67 40 23 16 0 1 0 0
..................................................................................................ACTGGACGTGGAGTCAGAAGGC............................................................ 22 1 3 6.67 20 10 10 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAAGCA........................................................... 23 2 9 6.56 59 36 23 0 0 0 0
.................................................................................................CACTGGACTTGGAGTCGGAAGGC............................................................ 23 1 2 6.50 13 8 5 0 0 0 0
..................................................................................................ACTCGACTTGGAGTCAGAAGG............................................................. 21 1 2 6.50 13 9 3 1 0 0 0
..................................................................................................ACTGGACTTGAAGTCAGAAGG............................................................. 21 1 4 6.50 26 16 10 0 0 0 0
..................................................................................................GCTGGACTTGGAGTCAGAAGGA............................................................ 22 2 9 6.44 58 34 23 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCAGT......................................................... 25 3 6 6.33 38 15 22 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGTAGGCA........................................................... 23 2 3 6.33 19 6 13 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGCAGGC............................................................ 21 1 3 6.33 19 4 15 0 0 0 0
.....................................................................................................GGACTTGGAGTCAGAAGGC............................................................ 19 0 2 6.00 12 5 7 0 0 0 0
..................................................................................................ACTGGACTTGGAGACAGAAGGCAT.......................................................... 24 2 1 6.00 6 4 2 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGACGGCA........................................................... 23 2 5 6.00 30 16 12 0 0 2 0
..................................................................................................ACTGGACTTGGAGTCAGAATGCAT.......................................................... 24 2 1 6.00 6 4 2 0 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAGGT............................................................ 23 1 7 5.86 41 24 17 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCGA.......................................................... 23 2 3 5.67 17 7 8 0 2 0 0
..................................................................................................ACTCGACTTGGAGTCAGAAGGCA........................................................... 23 2 3 5.67 17 10 7 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGTAT.......................................................... 24 2 6 5.50 33 13 18 2 0 0 0
..................................................................................................ATCGGACTTGGAGTCAGAAGGC............................................................ 22 2 4 5.50 22 12 10 0 0 0 0
..................................................................................................ACTGGTCTTGGAGTCAGAAGG............................................................. 21 1 2 5.50 11 5 6 0 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGCG........................................................... 23 2 2 5.50 11 6 5 0 0 0 0
..................................................................................................ACTGGACTTGGAGTTAGAAGGCAT.......................................................... 24 2 2 5.50 11 5 5 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGT................................................................ 18 1 14 5.43 76 32 43 0 1 0 0
..................................................................................................ACTGGACATGGAGTCAGAAGGCA........................................................... 23 2 5 5.40 27 16 10 1 0 0 0
..................................................................................................GCTGGACTTGGAGTCGGAAGGC............................................................ 22 2 4 5.25 21 9 12 0 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGA............................................................ 22 2 7 5.14 36 18 18 0 0 0 0
..................................................................................................ACTGGACTTGGAGTAAGAAGGCA........................................................... 23 2 3 5.00 15 6 8 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCGTTT........................................................ 26 3 1 5.00 5 1 4 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGAGT.......................................................... 24 2 1 5.00 5 2 3 0 0 0 0
..................................................................................................ACTGGACTTGGAGTAAGAAGG............................................................. 21 1 2 5.00 10 4 6 0 0 0 0
..................................................................................................ACTAGACTTGGAGTCAGAAGGCAT.......................................................... 24 2 1 5.00 5 3 2 0 0 0 0
.................................................................................................CACTGGACTTGGAGTCAGAAGGCG........................................................... 24 1 2 5.00 10 4 6 0 0 0 0
..................................................................................................ACTGGACTTGGCGTCAGAAGGA............................................................ 22 2 3 5.00 15 6 9 0 0 0 0
..................................................................................................ACTGGGCTTGGAGTCGGAAGGC............................................................ 22 2 4 5.00 20 11 8 1 0 0 0
..................................................................................................ACTGGACTTGGAGTC................................................................... 15 0 20 4.90 98 44 50 0 4 0 0
...............................................................................................ATTACTGGACTTGGAGTCAGAAGG............................................................. 24 2 4 4.75 19 9 10 0 0 0 0
..................................................................................................ACTTGACTTGGAGTCAGAAGGCA........................................................... 23 2 3 4.67 14 6 8 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCACAAGG............................................................. 21 1 3 4.67 14 7 5 2 0 0 0
..................................................................................................ACTGGGCTTGGAGTCAGAAGGCAT.......................................................... 24 2 3 4.67 14 8 6 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGTAGG............................................................. 21 1 2 4.50 9 3 6 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCTA.......................................................... 23 2 6 4.50 27 9 15 1 0 2 0
...................................................................................................CTGGACTTGGAGTCGGAAGG............................................................. 20 1 4 4.50 18 8 10 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAACG............................................................. 21 1 2 4.50 9 4 5 0 0 0 0
..................................................................................................ACTGGATTTGGAGTCAGAAGG............................................................. 21 1 7 4.43 31 13 18 0 0 0 0
..................................................................................................ACTGGACTTGGGGTCGGAAGGCA........................................................... 23 3 3 4.33 13 6 6 0 0 1 0
..................................................................................................ACTGGACTTGGAGTCAGAAT.............................................................. 20 1 12 4.25 51 21 30 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCCAT......................................................... 25 2 2 4.00 8 5 1 2 0 0 0
..................................................................................................ACTGGACTTGGAGTCCGAAGGCAT.......................................................... 24 2 1 4.00 4 2 2 0 0 0 0
..................................................................................................ACTGGAATTGGAGTCAGAAGGCA........................................................... 23 2 4 4.00 16 6 10 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGGAGGCAT.......................................................... 24 2 2 4.00 8 4 4 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAACGCAT.......................................................... 24 2 1 4.00 4 2 2 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAGGCCATT........................................................ 26 3 2 4.00 8 2 6 0 0 0 0
..................................................................................................ACTGGACTTGGACTCAGAAGG............................................................. 21 1 4 4.00 16 7 7 2 0 0 0
..................................................................................................ACTGGACTTGGGGTCGGAAGG............................................................. 21 2 4 4.00 16 7 9 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCCAT......................................................... 24 2 3 4.00 12 6 6 0 0 0 0
..................................................................................................ACTGGACATGGAGTCAGAAGG............................................................. 21 1 4 4.00 16 9 7 0 0 0 0
..................................................................................................ACTGGATTTGGAGTCAGAAGGCAT.......................................................... 24 2 1 4.00 4 2 1 1 0 0 0
............................................................CTCCTGACTCCAGGTCCTGTGTGT................................................................................................ 24 0 1 4.00 4 2 2 0 0 0 0
..............................................................CCTGACTCCAGGTCCTGTGTGT................................................................................................ 22 0 1 4.00 4 4 0 0 0 0 0
...................................................................................................CTGGACTTGGAGCCAGAAGGC............................................................ 21 1 4 3.75 15 6 9 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGGAGGA............................................................ 22 2 4 3.75 15 5 9 1 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGTA........................................................... 22 2 12 3.75 45 23 22 0 0 0 0
...................................................................................................TTGGACTTGGAGTCAGAAGGC............................................................ 21 1 6 3.67 22 14 8 0 0 0 0
..................................................................................................AGTGGACTTGGAGTCAGAAGGCA........................................................... 23 2 6 3.50 21 10 10 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCGGAAGGCC........................................................... 23 1 2 3.50 7 4 3 0 0 0 0
..................................................................................................ACTGGACTTGGGTTCAGAAGGC............................................................ 22 2 2 3.50 7 4 3 0 0 0 0
..................................................................................................ACCGGACTTGGAGTCGGAAGGC............................................................ 22 2 2 3.50 7 2 5 0 0 0 0
...............................................................................................TTAACTGGACTTGGAGTCAGAAGGC............................................................ 25 3 7 3.43 24 3 21 0 0 0 0
..................................................................................................ACTGGCCTTGGAGTCAGAAGGCA........................................................... 23 2 5 3.40 17 10 5 2 0 0 0
...................................................................................................CTGGACTTGGGGTCAGAAGGCA........................................................... 22 2 3 3.33 10 4 6 0 0 0 0
..................................................................................................ACTGGACTTGGAGCCAGAAGGCT........................................................... 23 2 6 3.33 20 12 7 1 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGAAAG............................................................. 21 1 9 3.22 29 19 10 0 0 0 0
...................................................................................................CTGGACTTGGAGTCAGAAGGCAAG......................................................... 24 2 2 3.00 6 2 4 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCCGAAGGA............................................................ 22 2 3 3.00 9 6 3 0 0 0 0
............................................................CTCCTGACTCCAGGTCCTG..................................................................................................... 19 0 1 3.00 3 0 1 0 2 0 0
....................................................................................................TGGACTTGGAGTCAGAAGGCCT.......................................................... 22 0 1 3.00 3 1 2 0 0 0 0
..................................................................................................ACTGGACTTGGAGTCAGATGG............................................................. 21 1 3 3.00 9 4 4 1 0 0 0
...................................................................................................CTGGACTTGGGGTCAGAAGGCAT.......................................................... 23 2 1 3.00 3 2 1 0 0 0 0
..................................................................................................ACTGGACTTGGTGTCAGAAGGCAT.......................................................... 24 2 1 3.00 3 3 0 0 0 0 0

Anti-sense strand reads

gtgTgTgGGGGgGggGGggtTGTggTGGTGgGTgGGTgtgggtgTGTgTgGGTGGGTgggGtGGtgTGtGGTggtGGtgtgtgttgGGtggTTTtTgGTGtggTGttggTgtGTgTTggGGtgGgtggTgtGgGGttGgGGgGtGtGtggGtgggtgTGGGGggTgGGTgGGGtttggTG

*********************************************..((.((((.((((.((.((((((((((((((.(((((((.......)))).))).)))))))))))))).)).)))).))))..))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR139075

testes		 SRR139076

testes
.............................................................................................TATCGTGACCTGATCCTCAGTCG................................................................ 23 2 8 0.38 3 1 1 1

Generated: 09/01/2015 at 11:34 AM