ID:

ssc-mir-374a

Coordinate:

chrX:67530361-67530440 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-11.8 -11.7 -11.7

Sense Strand Reads

TGTTACAGCCAGCAGCAATCTGGAGCAGCACTCCTTGGAAAGAAATTTTACATCGGCCATTATAATACAACCTGATAAGTGTTtgtGgtgTTtTgtGGTTGTtTTGTttTTGTgTGTGTtTtTtTtTGggTGTgTgggTTggTgTGTTtTgtGTTtGtgTGTGtGgTggTTGtGGGgtGG

********************************************.....((((..((....((((.((((((..(((((............))))))))))).))))....))..)))).......******************************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR066809

ovary
SRR139076

testes
SRR1274764

testes
SRR066810

testes
SRR1274763

ovary
...........................................................TTATAATACAACCTGATAAGTG................................................................................................... 22 0 1 3837.00 3837 3032 181 439 58 62 65
...........................................................TTATAATACAACCTGATAAGT.................................................................................................... 21 0 1 3818.00 3818 2315 430 487 322 173 91
.........................................................................................CTTATCAGGTTGTATTGTAATT..................................................................... 22 0 1 1078.00 1078 114 480 37 167 99 181
...........................................................TTATAATACAACCTGATAAGTGA.................................................................................................. 23 1 1 653.00 653 502 39 75 10 14 13
...........................................................TTATAATACAACCTGATAAGTGT.................................................................................................. 23 0 1 240.00 240 153 11 21 38 2 15
...........................................................TTATAATACAACCTGATAAG..................................................................................................... 20 0 1 189.00 189 135 12 18 7 11 6
.........................................................................................CTTATCAGGTTGTATTGTAAT...................................................................... 21 0 1 170.00 170 47 69 14 11 20 9
...........................................................TTATAATACAACCTGATAA...................................................................................................... 19 0 1 138.00 138 127 0 10 1 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGCA.. 24 0 9 96.89 872 1 0 824 3 44 0
...........................................................TTATAATACAACCTGATAAGTA................................................................................................... 22 1 1 74.00 74 54 10 6 2 1 1
............................................................TATAATACAACCTGATAAGTG................................................................................................... 21 0 1 63.00 63 55 1 7 0 0 0
...........................................................TTATAATACAACCTGATAAGA.................................................................................................... 21 1 2 57.00 114 13 54 9 3 34 1
............................................................TATAATACAACCTGATAAGT.................................................................................................... 20 0 1 48.00 48 37 3 6 0 2 0
.........................................................................................CTTATCAGGTTGTATTGTAA....................................................................... 20 0 1 44.00 44 12 17 5 0 7 3
..........................................................................................TTATCAGGTTGTATTGTAATT..................................................................... 21 0 1 41.00 41 7 16 1 3 8 6
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGC... 23 0 11 26.00 286 0 3 138 1 144 0
...........................................................TTATAGTACAACCTGATAAGT.................................................................................................... 21 1 1 23.00 23 15 1 4 1 2 0
...........................................................TTATAATACAACCTGATAAA..................................................................................................... 20 1 1 21.00 21 18 0 3 0 0 0
...........................................................TTATAATACAACCTGATAATTG................................................................................................... 22 1 1 16.00 16 13 0 3 0 0 0
...........................................................TTATAGTACAACCTGATAAGTG................................................................................................... 22 1 1 15.00 15 12 0 2 1 0 0
...........................................................TTATAATACAACCTGATCAGTG................................................................................................... 22 1 1 14.00 14 12 0 2 0 0 0
...........................................................TTATAATACAACCTGATA....................................................................................................... 18 0 1 13.00 13 11 1 1 0 0 0
...........................................................TTATAATACAACCTGATAAGTT................................................................................................... 22 1 1 13.00 13 12 0 0 1 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTA.................................................................... 23 1 1 12.00 12 2 6 2 1 1 0
...........................................................TTATAATACAACTTGATAAGTG................................................................................................... 22 1 1 11.00 11 11 0 0 0 0 0
..........................................................CTTATAATACAACCTGATAAGT.................................................................................................... 22 1 1 11.00 11 6 2 2 0 1 0
.........................................................................................CTTATCAGGTTGTATTGTA........................................................................ 19 0 1 10.00 10 6 3 0 1 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTT.................................................................... 23 1 1 9.00 9 4 3 0 0 1 1
..........................................................CTTATAATACAACCTGATAAGTG................................................................................................... 23 1 1 9.00 9 6 0 3 0 0 0
..........................................................ATTATAATACAACCTGATAAGTG................................................................................................... 23 0 1 9.00 9 5 0 4 0 0 0
...........................................................TTATAATACAACCTGATAAGTGAA................................................................................................. 24 2 1 8.00 8 7 0 0 1 0 0
...........................................................TTATAATACAACCTGATAAGTAA.................................................................................................. 23 2 2 8.00 16 10 0 6 0 0 0
...........................................................TTATAATACAACCTGATCAGTGA.................................................................................................. 23 2 1 8.00 8 7 0 1 0 0 0
............................................................TATAATACAACCTGATAAGTGA.................................................................................................. 22 1 1 8.00 8 8 0 0 0 0 0
.........................................................................................CTTATTAGGTTGTATTGTAATT..................................................................... 22 1 1 7.00 7 4 2 0 0 1 0
...........................................................................................TATCAGGTTGTATTGTAATTT.................................................................... 21 1 1 7.00 7 5 1 1 0 0 0
...........................................................TTATAATACAACCTGATAAGCG................................................................................................... 22 1 1 7.00 7 6 0 1 0 0 0
...........................................................TTATAATACAACCTGAT........................................................................................................ 17 0 1 7.00 7 6 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAAAA..................................................................... 22 2 1 7.00 7 1 4 0 1 1 0
.............................................................ATAATACAACCTGATAAGT.................................................................................................... 19 0 2 7.00 14 11 1 1 0 1 0
...........................................................TTATAATATAACCTGATAAGT.................................................................................................... 21 1 1 6.00 6 2 1 0 2 1 0
...........................................................TTATAATACAGCCTGATAAGT.................................................................................................... 21 1 1 6.00 6 4 1 0 0 1 0
.........................................................................................CTTATCAGGTTGTATTGTAAA...................................................................... 21 1 1 6.00 6 1 1 0 0 3 1
...........................................................TTATAATACAACTTGATAAGT.................................................................................................... 21 1 1 6.00 6 4 1 0 0 1 0
...........................................................TTATAATACAACCTTATAAGTG................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
...........................................................TTATAATACAACCTGATCAGT.................................................................................................... 21 1 1 6.00 6 4 0 2 0 0 0
...........................................................TTATAATACAACCTGATAATT.................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
...........................................................TTATAATACCACCTGATAAGTG................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................TTATCATACAACCTGATAAGTG................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................CTATAATACAACCTGATAAGT.................................................................................................... 21 1 1 5.00 5 3 0 2 0 0 0
...........................................................TTATAATACAACCTGATACGTG................................................................................................... 22 1 1 5.00 5 4 0 1 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTATT...................................................................... 22 1 1 5.00 5 1 1 0 1 2 0
...........................................................TTATAATACAACCTGATAAGTGG.................................................................................................. 23 1 1 5.00 5 1 1 1 1 0 1
.........................................................................................CTTATCAGGTTGTATTGTAATA..................................................................... 22 1 1 5.00 5 1 2 0 0 2 0
..........................................................................................TTATCAGGTTGTATTGTAAT...................................................................... 20 0 1 5.00 5 3 1 0 0 1 0
.............................................................ATAATACAACCTGATAAGTG................................................................................................... 20 0 2 4.50 9 9 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTC................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATACAACCTGATACGT.................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATACAACTTGATAAGTGA.................................................................................................. 23 2 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATATAACCTGATAAGTG................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
...........................................................TTATAATACAACCTGATAATTGT.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGGG................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
...........................................................TTATACTACAACCTGATAAGTG................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATACAACCTGATGAGTG................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TTATCAGGTTGTATTGTAA....................................................................... 19 0 1 4.00 4 3 1 0 0 0 0
........................................................................................ACTTATCAGGTTGTATTGT......................................................................... 19 0 1 4.00 4 4 0 0 0 0 0
...........................................................TTATAATGCAACCTGATAAGT.................................................................................................... 21 1 1 4.00 4 2 1 1 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTAAT...................................................................... 22 0 1 4.00 4 2 0 0 1 1 0
...........................................................TTATAATACAACCTGGTAAGT.................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0
...........................................................................................TATCAGGTTGTATTGTAATT..................................................................... 20 0 1 3.00 3 2 0 0 0 0 1
...........................................................TTATAATACAACCTGATAACTGT.................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................CTTATCCGGTTGTATTGTAATT..................................................................... 22 1 1 3.00 3 1 0 2 0 0 0
...........................................................TTATAATACAACCTGATCAGTGT.................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................TTATAATACAACCTGATAGGT.................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAAAT..................................................................... 22 1 1 3.00 3 2 0 0 0 0 1
.....................................................................................AGCACTTATCAGGTTGTATTGT......................................................................... 22 0 1 3.00 3 3 0 0 0 0 0
............................................................TATAATACAACCTGATAAG..................................................................................................... 19 0 1 3.00 3 1 0 2 0 0 0
.........................................................................................CTTATCGGGTTGTATTGTAATT..................................................................... 22 1 1 3.00 3 1 1 0 1 0 0
..........................................................GTTATAATACAACCTGATAAGT.................................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
...........................................................TTATAATACAACCTGTTAAGT.................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGT......................................................................... 18 0 1 3.00 3 0 3 0 0 0 0
...........................................................TTATAATCCAACCTGATAAGT.................................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0
...........................................................CTATAATACAACCTGATAAGTG................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................TTGTAATACAACCTGATAAGTG................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TATCAGGTTGTATTGTAATTTT................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................................................................................TGTTAGACTGTGAGCTCCTTGAGGGCA.. 27 1 2 3.00 6 0 0 6 0 0 0
..........................................................CTTATAATACAACCTGATAAGTGA.................................................................................................. 24 2 1 3.00 3 1 1 1 0 0 0
...........................................................TTATAATACAACCTGATAAGTGAT................................................................................................. 24 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TATCAGGTTGTATTGTAATTA.................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................ATATAATACAACCTGATAAGTG................................................................................................... 22 1 2 2.50 5 5 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTTA.................................................................................................. 23 2 2 2.50 5 4 0 1 0 0 0
...........................................................TTATAATACAATCTGATAAGTG................................................................................................... 22 1 2 2.50 5 5 0 0 0 0 0
...........................................................TTATGATACAACCTGATAAGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGATATGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACTTGATAAGTGT.................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGAG................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................ATTATAATACAACCTGATAAGTGA.................................................................................................. 24 1 1 2.00 2 0 0 2 0 0 0
...........................................................TTCTAATACAACCTGATAAGTG................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATGCAACCTGATAAGTG................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................TTTATAATACAACCTGATAAG..................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................TATAATACAACCTGATAA...................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGG.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTATCAGGTTGTATTGTAATTT.................................................................... 22 1 1 2.00 2 1 0 0 1 0 0
............................................................TATAGTACAACCTGATAAGT.................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGAAAAGTG................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAATCTGATAAGT.................................................................................................... 21 1 3 2.00 6 4 0 0 1 0 1
...........................................................TTATAGTACAACCTGATAAGTGA.................................................................................................. 23 2 1 2.00 2 1 0 1 0 0 0
..........................................................ATTATAATACAACCTGATAAG..................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0
............................................................TATAATACAACCTGATAAGTGT.................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTGAAC................................................................. 26 3 1 2.00 2 2 0 0 0 0 0
...........................................................TTATGATACAACCTGATAAGTG................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTATT...................................................................... 21 1 1 2.00 2 1 1 0 0 0 0
...........................................................TTATAATACAACCTGGTAAGTGA.................................................................................................. 23 2 1 2.00 2 2 0 0 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTAT....................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGACAAGTG................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................TTCTAATACAACCTGATAAGT.................................................................................................... 21 1 1 2.00 2 1 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAT....................................................................... 20 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................TTATCAGGTTGTATTGTAATTA.................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................TTATAATACAACCAGATAAGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................TTATAATACGACCTGATAAGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................CTTATTAGGTTGTATTGTAAT...................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................CTATAATACAACCTGATAAGTGA.................................................................................................. 23 2 1 2.00 2 1 0 1 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTAA....................................................................... 21 0 1 2.00 2 1 1 0 0 0 0
...........................................................TTATAATACAGCCTGATAAGTG................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTATTT..................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
.........................................................................................CTTGTCAGGTTGTATTGTAATT..................................................................... 22 1 3 1.67 5 0 5 0 0 0 0
...........................................................TTAAAATACAACCTGATAAGTGA.................................................................................................. 23 2 2 1.50 3 3 0 0 0 0 0
...........................................................TTATAATACTACCTGATAAGT.................................................................................................... 21 1 2 1.50 3 1 1 0 0 1 0
...........................................................TTATAATACAACCTGATAAGTGC.................................................................................................. 23 1 3 1.33 4 1 0 2 0 0 1
...........................................................TTATAATACAACCTTATAAGT.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTAAAA..................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
...........................................................TTATAATACAACCTGATAGGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................TTGTAATACAACCTGATAAGCG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGACAAGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................CTTATTAGGTTGTATTGTAA....................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTG.......................................................................... 17 0 1 1.00 1 1 0 0 0 0 0
...........................................................ATATAATACAACCTGATAAGT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACTTGATAAG..................................................................................................... 20 1 2 1.00 2 0 0 2 0 0 0
...........................................................TTATAATACAACCTGATAAGTAT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATC..................................................................... 22 1 2 1.00 2 0 0 0 1 1 0
...........................................................TTATAATACAACCTGATAAGTGGTT................................................................................................ 25 2 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGATAAGTCG.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................TTATCATACAACCTGATAAGTGT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTACCAGGTTGTATTGTAAT...................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
...........................................................TTATAGTACAACCTTATAAGT.................................................................................................... 21 2 2 1.00 2 0 0 2 0 0 0
.........................................................................................CTTATCAGTTTGTATTGTAAT...................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTACTGTAATT..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................TTATCAGGTTGTATTGTATT...................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGATAATTGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAACACAACCTGATAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................CTTATAATACAACCTGATAAGTGT.................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTGTTACAGCACTTATCAGGT................................................................................. 40 0 1 1.00 1 0 0 0 1 0 0
.............................................................ATAATACAACCTGATAAGTGTA................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTGA....................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................CTTATCAGGCTGTATTGTAATT..................................................................... 22 1 1 1.00 1 0 0 0 0 0 1
.........................................................................................CTTATCAGTTTGTATTGTAATT..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTA........................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGC.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGGTAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................ATAATACAACCTGATAAGTGT.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGCATTGTAAT...................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................GTATAATACAACCTGATAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TCATAATACAACCTGATAAG..................................................................................................... 20 1 2 1.00 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTAATAAGT.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................TTATAATACAACCTGATAAGCGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATATAACCTGATAAGTGA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
........................................................................................CCTTATCAGGTTGTATTGTAATT..................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................TATAATACACCCTGATAAGT.................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
........................................................................................ACTTATCAGGTTGTATTGTAAC...................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................AGAAATTTTACATCGGCC.......................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGATAAT..................................................................................................... 20 1 3 1.00 3 2 0 1 0 0 0
...........................................................TTATAATACAACCTCATAAGT.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
...........................................................................................TATCAGGTTGTATTGTAATTGT................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
...........................................................TTATAATAGAACCTGATAAGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCCGATAAGT.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTGAAA................................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0
..........................................................ATTATAATACAACCTGATAAGTGAA................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAAGCTGATAAG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGGGT.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGATAAGTGTAAC............................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATATTACAACCTGATAAGT.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAAGCTGATAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGTTAAGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................ATTATCAGGTTGTATTGTAATT..................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...........................................................TTATCATACAACCTGATAACTGT.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACACCCTGATAAGTGA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TTATCGGGTTGTATTGTAATT..................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
..............................................................TAATACAACCTGATAAGTG................................................................................................... 19 0 2 1.00 2 2 0 0 0 0 0
.........................................................................................CTTATCGGGTTGTATTGTAATTT.................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATGCAACCTGATAAGTGT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCAGATAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACACCCTGATAAGT.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................TATAATACAACCTGATAAGGG................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................TCATAATACAACCTGATAAGTG................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0
........................................................................................TCTTATCAGGTTGTATTGTAATTA.................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATAA.................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.........................................................................................CTTATCAGGTTGTATTGTAACT..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................ATAATACAACCTGATAAGTGTT................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................TTTATCAGGTTGTATTGTAATT..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTACTT..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCGGGTTGTATTGTAATA..................................................................... 22 2 1 1.00 1 0 0 0 0 0 1
........................................AGAAATTTTACATCGGCCA......................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTGT................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................AGTTAGACTGTGAGCTCCTTGAGGGCATT 29 2 1 1.00 1 0 0 1 0 0 0
...........................................................TTATAATACTACCTGATAAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATTAGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATCATACAACCTGATAAG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGCGT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATACG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................TAATACAACCTGATAAGT.................................................................................................... 18 0 2 1.00 2 2 0 0 0 0 0
.............................................................ATAATACAACCTGATAA...................................................................................................... 17 0 2 1.00 2 2 0 0 0 0 0
...........................................................TTATTATACAACCTGATAAGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................ATCAGTTAGACTGTGAGCTCCTTGAGGGC... 29 0 1 1.00 1 0 0 0 0 0 1
...........................................................TTATAATACAACCTGATAAGAGT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATACAACCAGATAAGTGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTC.................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TATCAGGTTGTATTGTAATTAT................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.........................................GAAATTTTACATCGGCCA......................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATTG.................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................TTATAATTCAACCTGATAAGTGA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................CAGTTAGACTGTGAGCTCCTTGAGGGC... 27 0 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................................................AGACTGTGAGCTCCTTGAGGGCA.. 23 0 9 0.78 7 0 0 4 0 3 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGG.... 22 0 13 0.77 10 0 0 7 1 2 0
...........................................................TTATAATACAACCTGATAACTGA.................................................................................................. 23 2 4 0.75 3 2 1 0 0 0 0
...........................................................TTATAATACATCCTGATAAGTGA.................................................................................................. 23 2 4 0.75 3 3 0 0 0 0 0
...........................................................TTATAATATAACCTTATAAGTG................................................................................................... 22 2 4 0.75 3 3 0 0 0 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGCT.. 24 1 11 0.73 8 0 0 8 0 0 0
.........................................................ACTTATAATACAACCTGATAAGT.................................................................................................... 23 2 3 0.67 2 2 0 0 0 0 0
...........................................................TTATAATACAACTTGATAAGTA................................................................................................... 22 2 3 0.67 2 2 0 0 0 0 0
.........................................................CAATATAATACAACCTGCTAAGTG................................................................................................... 24 2 2 0.50 1 0 0 0 0 1 0
...........................................................TTATAATACAGCCTGATAAG..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACATGATAAGT.................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0
............................................................TATAATACCACCTGATAAGT.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGCAG. 25 0 4 0.50 2 0 0 2 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATG..................................................................... 22 1 2 0.50 1 0 0 1 0 0 0
.........................................................................................CTTATTAGGTTGTATTGTAATTT.................................................................... 23 2 2 0.50 1 0 1 0 0 0 0
...........................................................................................TATCAGGTTGTATTGTACTTTT................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACCACCTGATAAGT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
.............................................................ATAATACAACCTGATAAGTGA.................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTCATT..................................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGCGGT................................................................................................. 24 2 2 0.50 1 1 0 0 0 0 0
.............................................................ATAATACAACCTGATAAGG.................................................................................................... 19 1 2 0.50 1 0 0 0 0 1 0
...........................................................ATATAATACAACCTGATAAGTGT.................................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................AGCTAGACTGTGAGCTCCTTGAGGGCA.. 27 1 2 0.50 1 0 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTCTTGTAA....................................................................... 20 1 2 0.50 1 0 0 1 0 0 0
...........................................................TTATAATACAACCTGATAACT.................................................................................................... 21 1 4 0.50 2 1 0 1 0 0 0
...........................................................TTATAATACAACCTGACAAGTGA.................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTGCAGCA.............................................................................................. 27 3 2 0.50 1 1 0 0 0 0 0
...........................................................TCATAATACAACCTGATAAGT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGAAAAGT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
.............................................................ATAATACAACCTGCTAAGTGTT................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
............................................................TTTAATACAACCTGATAAGTG................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
...........................................................TTAAAATACAACCTGATAAGTG................................................................................................... 22 1 2 0.50 1 0 0 1 0 0 0
.........................................................................................CTTATCAAGTTGTATTGTAATT..................................................................... 22 1 2 0.50 1 0 0 0 0 1 0
...........................................................TTATCATACAACCTGATAAGTA................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATAGAACCTGATAAGTGA.................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTGGGC................................................................................................ 25 3 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGCTAAGTG................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTAGT................................................................................................. 24 2 2 0.50 1 0 0 1 0 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGCAC. 25 1 10 0.40 4 0 0 4 0 0 0
................................................................ATACAACCTGATAAGT.................................................................................................... 16 0 5 0.40 2 2 0 0 0 0 0
...........................................................TTATAATACAACCTGATCAGGG................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................TTATACTACAACCTGGTAAGTG................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................TATTATACAACCTGATAAGTGA.................................................................................................. 22 2 3 0.33 1 1 0 0 0 0 0
..........................................................ATCATAATACAACCTGCTAAGT.................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0
.........................................................AATTATAATACAACCTGATAAGTG................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGAGAAGTGA.................................................................................................. 23 2 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAATACGACCTGATAAGTT................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0
........................................................CAATTATAATACAACCTGATAAGTG................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
................................................................ATACAACCTGATAAGTG................................................................................................... 17 0 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATATG..................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0
...........................................................GTATAATACAACCTGATAAGT.................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGGGC.................................................................................................. 23 2 3 0.33 1 0 0 1 0 0 0
...........................................................CTATAATACAACCTGATCAGT.................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAGTGCA................................................................................................. 24 2 3 0.33 1 1 0 0 0 0 0
...........................................................TTATAGTACAACCTGATAA...................................................................................................... 19 1 3 0.33 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAAGAC.................................................................... 23 3 3 0.33 1 0 0 1 0 0 0
........................................................................................ACTTATCAGGTTGTA............................................................................. 15 0 7 0.29 2 2 0 0 0 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGG..... 21 0 18 0.28 5 1 0 2 0 2 0
.............................................................TTAATACAACCTGATAAGT.................................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0
.............................................................TTAATACAACCTGATAAGTG................................................................................................... 20 1 4 0.25 1 0 0 1 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTT........................................................................ 19 1 4 0.25 1 0 0 0 0 1 0
...........................................................TTATAATACAACATGATAAGTG................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAATAAA................................................................... 24 3 4 0.25 1 1 0 0 0 0 0
.........................................................................................CTTATCAGGTTGTATTGTAAAC..................................................................... 22 2 4 0.25 1 0 0 0 1 0 0
...........................................................TTATAATACAACCTAATAA...................................................................................................... 19 1 9 0.22 2 2 0 0 0 0 0
.......................................................................................................................................................TGTTAGACTGTGAGCTCCTTGAGGGCAAT 29 3 5 0.20 1 0 0 1 0 0 0
.......................................................................................................................................................ACATAGACTGTGAGCTCCTTGAGGGCA.. 27 2 5 0.20 1 0 0 1 0 0 0
...........................................................ATATAATACAACCTGATAAGTA................................................................................................... 22 2 5 0.20 1 1 0 0 0 0 0
..............................................................AAATACAACCTGATAAGTG................................................................................................... 19 1 5 0.20 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGATAAAA.................................................................................................... 21 2 16 0.19 3 2 0 0 0 1 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGCGGGCA.. 24 1 11 0.18 2 0 0 2 0 0 0
...........................................................................................TATCAGGTTGTATTGTAATTAA................................................................... 22 2 6 0.17 1 0 1 0 0 0 0
...........................................................TTATAGTACAACCTGATAAGA.................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0
...........................................................TTATAATACAACCTGCTCAGT.................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0
..........................................................................................................................................................TCGACTGTGAGCTCCTTGAGGGCA.. 24 1 12 0.17 2 0 0 2 0 0 0
..........................................................................................................................................................TAGACTGCGAGCTCCTTGAGGGCA.. 24 1 12 0.17 2 0 0 2 0 0 0
..........................................................................................................................................................TAGACTGTGAGCTCCTTGAGGGCAGT 26 1 6 0.17 1 0 0 1 0 0 0
..........................................................................................................................................................TAGACTGAGAGCTCCTTGAGGGCA.. 24 1 13 0.15 2 0 0 2 0 0 0
........................................................ATTTTATAATACAACCTGATAAGT.................................................................................................... 24 3 7 0.14 1 0 1 0 0 0 0
.............................................................ATCATACAACCTGATAAGTGA.................................................................................................. 21 2 7 0.14 1 1 0 0 0 0 0

Anti-sense strand reads

ACAATGTCGGTCGTCGTTAGACCTCGTCGTGAGGAACCTTTCTTTAAAATGTAGCCGGTAATATTATGTTGGACTATTCACAAtgtCgtgAAtAgtCCAACAtAACAttAACAgACACAtAtAtAtACggACAgAgggAAggAgACAAtAgtCAAtCtgACACtCgAggAACtCCCgtCC

******************************************************.....((((..((....((((.((((((..(((((............))))))))))).))))....))..)))).......********************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR139076

testes
SRR1274763

ovary
SRR1274764

testes
.......................................................................................GTGAATAGTCCAACATAACATT....................................................................... 22 0 1 3.00 3 3 0 0 0
......................................................................................AGTGAATAGTCCAACATAAAATT....................................................................... 23 2 2 1.50 3 3 0 0 0
......................................................................................CGTGAATAGTCCAACATAATATT....................................................................... 23 1 3 1.33 4 1 2 1 0
..........................................................................................AATAGTCCAACATAACATT....................................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................................TGGCTTGAATAGTCCAACATAATATT....................................................................... 26 3 1 1.00 1 0 1 0 0
........................................................................................TGAATAGTCCAACATAATATTCA..................................................................... 23 2 3 0.67 2 2 0 0 0
.........................................................................................................................................................AATCTGACACTCGAGGAGCT....... 20 1 20 0.65 13 6 3 2 2
.........................................................GTAATGTTATGTTGGACTATTC..................................................................................................... 22 1 2 0.50 1 0 1 0 0
..................................................................................ACGACGTGAATAGTCCAACATAATATT....................................................................... 27 3 2 0.50 1 1 0 0 0
.......................................................................................GTGAATAGTCCAACATAAAATT....................................................................... 22 1 2 0.50 1 0 1 0 0
........................................................................................TGAATAGTCCAACATA............................................................................ 16 0 5 0.40 2 2 0 0 0
.......................................................................................GTGAATAGTCCAACATAATATTAA..................................................................... 24 1 3 0.33 1 1 0 0 0
......................................................................................CGGGAATAGTCCAACATAATATT....................................................................... 23 2 3 0.33 1 0 1 0 0
.......................................................................................GTGAATAGTCCAACATA............................................................................ 17 0 3 0.33 1 1 0 0 0
.....................................................................................ACGTGAATAGTCCAACATAATATT....................................................................... 24 2 3 0.33 1 1 0 0 0
.......................................................................................GTGAATAGTCCAACATAATATTAAC.................................................................... 25 1 3 0.33 1 1 0 0 0
.................................................................ATGTTGGACTATTCA.................................................................................................... 15 0 7 0.29 2 2 0 0 0
.......................................................................................GTGAATAGTCCAACATAAA.......................................................................... 19 1 5 0.20 1 1 0 0 0
..........................................................................................................................................................ATCTGACACTCGAGGAA......... 17 0 20 0.15 3 3 0 0 0
......................................................................................AGTGAATAGTCCAACAT............................................................................. 17 1 17 0.06 1 1 0 0 0
.....................................................................................................................................................AGTCGATCTAACACTCGAGGAA......... 22 2 19 0.05 1 1 0 0 0
............................................................................................................................................................CTGACACTCGAGGAACT....... 17 0 20 0.05 1 1 0 0 0

Generated: 09/01/2015 at 11:44 AM