ID:

ssc-mir-362

 Coordinate:

chrX:48638466-48638544 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.2 -38.7

Sense Strand Reads

ACGTGCGCGCACGCACACACACAGCAGGTGCCTGAGCCTTCTCATCTGCTCCCCCTCTCAAATCCTTGGAACCTAGGTGTGAGTGCTGCTCTAGTGCAACACACCTATTCAAGGATTCAAAGAGGCTGAGCCTTGTCTTCAAAGAGAACGACCGAGTACCTGTATGTCACCTCTTCTGC

*********************************************..((((..(((((..((((((((((...((((((((.((((((...))))))..))))))))))))))))))...)))))..))))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR139076

testes		 SRR066810

testes		 SRR1274763

ovary		 SRR1274764

testes
............................................................AATCCTTGGAACCTAGGTGTGAGT............................................................................................... 24 0 1 223.00 223 41 108 21 30 15 8
............................................................AATCCTTGGAACCTAGGTGTGA................................................................................................. 22 0 1 179.00 179 81 57 17 20 3 1
.................................................................................................AACACACCTATTCAAGGATTCA............................................................ 22 0 1 117.00 117 67 14 31 4 0 1
............................................................AATCCTTGGAACCTAGGTGTGAG................................................................................................ 23 0 1 111.00 111 29 46 4 14 8 10
.................................................................................................AACACACCTATTCAAGGATTC............................................................. 21 0 1 61.00 61 47 2 7 4 0 1
............................................................AATCCTTGGAACCTAGGTGTG.................................................................................................. 21 0 1 57.00 57 48 5 2 1 0 1
............................................................AATCCTTGGAACCTAGGTGTGAGTGC............................................................................................. 26 0 1 51.00 51 20 13 2 3 10 3
.................................................................................................AACACACCTATTCAAGGATT.............................................................. 20 0 1 29.00 29 18 0 8 0 1 2
............................................................AATCCTTGGAACCTAGGTGTGAGA............................................................................................... 24 1 1 15.00 15 1 9 1 1 1 2
............................................................AATCCTTGGAACCTAGGTGT................................................................................................... 20 0 1 15.00 15 14 0 1 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTG.............................................................................................. 25 0 1 12.00 12 4 5 0 1 1 1
.................................................................................................AACACACCTATTCAAGGAT............................................................... 19 0 1 10.00 10 7 0 0 2 0 1
.................................................................................................AACACACCTATTCAAGGATTCAA........................................................... 23 0 1 10.00 10 6 1 2 1 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGT............................................................................................. 26 1 1 4.00 4 1 1 0 2 0 0
............................................................AATCCTTGGAACCTAGGTGTGT................................................................................................. 22 1 1 4.00 4 3 1 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGCT............................................................................................ 27 0 1 4.00 4 1 3 0 0 0 0
.................................................................................................AACACACCTATTCAAGGATTCT............................................................ 22 1 1 4.00 4 2 1 1 0 0 0
.................................................................................................AACACATCTATTCAAGGATTCA............................................................ 22 1 1 4.00 4 3 0 1 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAA................................................................................................ 23 1 1 4.00 4 3 0 0 0 1 0
.................................................................................................AACATACCTATTCAAGGATTCA............................................................ 22 1 1 3.00 3 0 0 3 0 0 0
.................................................................................................AACACACCTATTCAAGGATTCG............................................................ 22 1 1 2.00 2 1 0 0 0 0 1
................................................................CTTGGAACCTAGGTGTGA................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTT.............................................................................................. 25 1 1 2.00 2 0 1 1 0 0 0
.................................................................................................AACACACCTATTCAAGGATTTA............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
................................................................CTTGGAACCTAGGTGTGAGTGC............................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
............................................................AATCCTTGGAACCTCGGTGTGA................................................................................................. 22 1 1 2.00 2 0 0 2 0 0 0
............................................................AATCCTTGGAACCTAGGTGA................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0
............................................................AATCTTTGGAACCTAGGTGTG.................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
................................................................CTTGGAACCTAGGTGTGAGT............................................................................................... 20 0 1 2.00 2 0 0 1 1 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGA............................................................................................. 26 1 1 2.00 2 0 0 0 2 0 0
..................................................................................................ACACACCTATTCAAGGATTCA............................................................ 21 0 1 2.00 2 2 0 0 0 0 0
.............................................................ATCCTTGGAACCTAGGTGTGAG................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0
............................................................AATCTTTGGAACCTAGGTGTGA................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGCAT........................................................................................... 28 2 1 1.00 1 0 0 0 1 0 0
............................................................AATCCTTGGAACTTAGGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACACACCTATTCAAGGCTTCA............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGTACCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0
................................................................CTTGGAACCTAGGTGT................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAGCCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGAACCCAGGTGTGA................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0
.................................................................................................AACACACCTGTTCAAGGATTCA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGGGTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................CTTGGAACCTAGGTGTG.................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................AGAGGCTGAGCCTTGTCTTCAAAGAGAACGACCGAGTACCTGTAT.............. 45 0 1 1.00 1 0 0 0 0 1 0
.................................................................................................AACACACCTATTCAAGGATTA............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.........................................................ATTAATCCTTGGAACCTAGGTGTGAGTGC............................................................................................. 29 3 1 1.00 1 0 1 0 0 0 0
...........................................................CAATCCTTGGAACCTAGGTGTGAGTGC............................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGGGAGT............................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................ACTCCTTGGAACCTAGGTGTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................ACTCCTTGGAACCTAGGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTATGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACACTCCTATTCAAGGATTCA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACACACCTATTCAAGGATTC............................................................. 20 0 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGAACCTAGGCGTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AATTCTTGGAACCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................CATCCTTGGAACCTAGGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACACACTTATTCAAGGATT.............................................................. 20 1 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGCA............................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
............................................................AATCCTTGGAACCTAAGTGTGA................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................ATCTTTGGAACCTAGGTGTGAGT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................GATCCTTGGAACCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0
............................................................AATCCTTGGAACTTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGACCCTAGGTGTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACACACCTATTTAAGGATTCA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTAGAACCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
............................................................AATTCTTGGAACCTAGGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................TACACACCTATTCAAGGATTCA............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGAACCTCGGTGTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGG................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGAGTGAGT............................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCTTTGGAACCTCGGTGTGA................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................AATTCTTGGAACCTAGGTGTGAGTG.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGGACCTAGGTGTGAGT............................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0
............................................................AATCCTTGGAACCTAGGTGAGT................................................................................................. 22 2 2 1.00 2 1 1 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGC............................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
............................................................AATCCTTGGAACCTGGGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAGTGCTGCTCT....................................................................................... 32 0 1 1.00 1 0 0 0 0 0 1
............................................................AATCCTTGGAACCTAGGCGTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACACACCTATTCAAGGATTCAT........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTGTGAAAA.............................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0
...................................................................................................AACACCTATTCAAGGATTCA............................................................ 20 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................AACATACCTATTCAAGGATTCT............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
............................................................AATCCTTGGAACCTAGGTAAG.................................................................................................. 21 2 4 0.25 1 0 1 0 0 0 0
.................................................................................................AACACATCTATTCAAGG................................................................. 17 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

TGCACGCGCGTGCGTGTGTGTGTCGTCCACGGACTCGGAAGAGTAGACGAGGGGGAGAGTTTAGGAACCTTGGATCCACACTCACGACGAGATCACGTTGTGTGGATAAGTTCCTAAGTTTCTCCGACTCGGAACAGAAGTTTCTCTTGCTGGCTCATGGACATACAGTGGAGAAGACG

*********************************************..((((..(((((..((((((((((...((((((((.((((((...))))))..))))))))))))))))))...)))))..))))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:43 AM