ID:

ssc-mir-31

 Coordinate:

chr1:224397161-224397238 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.5 -36.5 -36.3

Sense Strand Reads

GGAAAAGTAAAACACTGAAGAGGCATGGTGTGTTGCTCCTGTAACTTGGAACTGGAGAGGAGGCAAGATGCTGGCATAGCTGTTAAACTGAGAACCTGCTATGCCAACATATTGCCATCTTTCTTGTCTGACAGCAGCCATGGCCACCTGCGTGCTGCTCCTCCATGCACTGCTCCAG

*********************************************((((.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))))))...******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR1274763

ovary		 SRR139075

testes		 SRR139076

testes		 SRR1274764

testes
............................................................AGGCAAGATGCTGGCATAGCTG................................................................................................ 22 0 1 2816.00 2816 943 688 1093 67 11 14
............................................................AGGCAAGATGCTGGCATAGCTGT............................................................................................... 23 0 1 1888.00 1888 811 687 301 64 21 4
............................................................AGGCAAGATGCTGGCATAGCT................................................................................................. 21 0 1 1557.00 1557 745 608 74 108 19 3
................................................................................................TGCTATGCCAACATATTGCCATC........................................................... 23 0 1 498.00 498 320 166 11 1 0 0
............................................................AGGCAAGATGCTGGCATAGCTGA............................................................................................... 23 1 1 312.00 312 165 112 14 15 6 0
............................................................AGGCAAGATGCTGGCATAGC.................................................................................................. 20 0 1 161.00 161 76 62 19 4 0 0
........................................GTAACTTGGACCTGGAGAGG...................................................................................................................... 20 1 1 78.00 78 41 37 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTT.............................................................................................. 24 0 1 73.00 73 32 27 11 1 2 0
............................................................AGGCAAGATGCTGGCATAGCTA................................................................................................ 22 1 1 56.00 56 27 21 3 4 1 0
............................................................AGGCAAGATGCTGGCATAGCTT................................................................................................ 22 1 1 48.00 48 22 19 4 1 2 0
............................................................AGGCAAGATGCTGGCATAG................................................................................................... 19 0 1 48.00 48 19 20 2 7 0 0
................................................................................................TGCTATGCCAACATATTGCCAT............................................................ 22 0 1 44.00 44 35 9 0 0 0 0
.............................................................GGCAAGATGCTGGCATAGCTG................................................................................................ 21 0 1 42.00 42 22 18 1 1 0 0
.................................................................................................GCTATGCCAACATATTGCCATC........................................................... 22 0 1 39.00 39 24 15 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTA.............................................................................................. 24 1 1 32.00 32 18 5 6 2 0 1
.......................................TGTAACTTGGACCTGGAGAGG...................................................................................................................... 21 1 1 26.00 26 15 11 0 0 0 0
.............................................................GGCAAGATGCTGGCATAGCTGT............................................................................................... 22 0 1 25.00 25 10 12 1 1 1 0
................................................................................................TGCTATGCCAACATATTGCCA............................................................. 21 0 1 22.00 22 15 7 0 0 0 0
......................................CTGTAACTTGGACCTGGAGAGG...................................................................................................................... 22 1 1 20.00 20 8 12 0 0 0 0
.........................................TAACTTGGACCTGGAGAGG...................................................................................................................... 19 1 2 18.00 36 23 13 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTAA............................................................................................... 23 2 1 15.00 15 2 12 0 0 1 0
............................................................AGGCAAGATGCTGGCATAGCTGAA.............................................................................................. 24 2 1 14.00 14 9 3 0 1 1 0
............................................................AGGCAAGATGCTGGCATAGCTGTAA............................................................................................. 25 1 1 14.00 14 11 3 0 0 0 0
.............................................................GGCAAGATGCTGGCATAGCT................................................................................................. 20 0 1 14.00 14 5 3 0 6 0 0
........................................GTAACTTGGACCTGGAGAGGA..................................................................................................................... 21 1 1 14.00 14 8 6 0 0 0 0
................................................................................................TGCTATGCCAACATATTGCCATCT.......................................................... 24 0 1 13.00 13 12 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTT............................................................................................. 25 1 1 12.00 12 10 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAT............................................................................................. 25 2 1 12.00 12 4 5 1 2 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAT.............................................................................................. 24 1 1 10.00 10 4 2 2 0 2 0
............................................................AGGCAAGATGCTGGCATAGCTGG............................................................................................... 23 1 1 10.00 10 7 3 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTGAAC.......................................................................................... 28 1 1 9.00 9 3 6 0 0 0 0
................................................................................................TGCTATGCCAACATATTGCCATCA.......................................................... 24 1 1 9.00 9 4 3 2 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTTT............................................................................................... 23 1 1 8.00 8 4 4 0 0 0 0
................................................................................................TGCTATGCCAACATATTGCC.............................................................. 20 0 1 8.00 8 6 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGT.................................................................................................. 20 1 1 8.00 8 5 3 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAGA............................................................................................ 26 2 1 8.00 8 4 4 0 0 0 0
............................................................AGGCAAGATGCTGGCATA.................................................................................................... 18 0 1 7.00 7 3 3 1 0 0 0
...................................................................................................TATGCCAACATATTGCCATCT.......................................................... 21 0 1 7.00 7 3 3 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCA................................................................................................. 21 1 1 6.00 6 2 3 0 0 1 0
............................................................AGGCAAGATGCTGGCATAGCTGAAA............................................................................................. 25 2 1 6.00 6 5 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGC............................................................................................... 23 1 1 5.00 5 1 4 0 0 0 0
..................................................................................TTAAACTGAGAACCTGCTATGCCAACATATTGCCATC........................................................... 37 0 1 5.00 5 0 0 4 0 0 1
................................................................................................TGCTATGCCAACATATTGCCATT........................................................... 23 1 1 5.00 5 5 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAGAAT.......................................................................................... 28 3 1 5.00 5 2 3 0 0 0 0
.........................................TAACTTGGACCTGGAGAGGA..................................................................................................................... 20 1 1 4.00 4 1 3 0 0 0 0
............................................................GGGCAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0
............................................................TGGCAAGATGCTGGCATAGCT................................................................................................. 21 1 1 4.00 4 2 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTTA............................................................................................... 23 2 1 4.00 4 1 1 0 2 0 0
...........................................................CAGGCAAGATGCTGGCATAGCTG................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
............................................................AGGCAAGATACTGGCATAGCTG................................................................................................ 22 1 1 4.00 4 2 0 1 1 0 0
..................................................................................................CTATGCCAACATATTGCCATC........................................................... 21 0 1 3.00 3 0 3 0 0 0 0
............................................................AGGCAGGATGCTGGCATAGCTGT............................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAGT............................................................................................ 26 3 1 3.00 3 3 0 0 0 0 0
............................................................AGGCAAGATGCTAGCATAGCTG................................................................................................ 22 1 1 3.00 3 1 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCG................................................................................................. 21 1 1 3.00 3 0 3 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTTT............................................................................................ 26 2 1 3.00 3 0 3 0 0 0 0
.....................................CCTGTAACTTGGACCTGGAGAGG...................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTGT............................................................................................. 25 2 1 3.00 3 3 0 0 0 0 0
.............................................................GGCAAGATGCTGGCATAGCTGA............................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0
............................................................AGGCAAGATGCTGGTATAGCTGT............................................................................................... 23 1 1 3.00 3 0 2 1 0 0 0
.................................................................................................GCTATGCCAACATATTGCCA............................................................. 20 0 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTC................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTGGTATAGCTG................................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAGAA........................................................................................... 27 2 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTAAACTGAGAACCT................................................................................. 37 0 1 2.00 2 0 0 2 0 0 0
............................................................TGGCAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
............................................................AGGCATGATGCTGGCATAGCTGT............................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
............................................................AGGCAAGGTGCTGGCATAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
............................................................TGGCAAGATGCTGGCATAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAGGCAAGATGCTGGCATAGCT................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................AAGGCAAGATGCTGGCATAGCT................................................................................................. 22 1 1 2.00 2 0 2 0 0 0 0
............................................................AGGCAAGATGCTGACATAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATACTGGCATAGCT................................................................................................. 21 1 1 2.00 2 0 1 0 1 0 0
...............................................................................................CTGCTATGCCAACATATTGCCA............................................................. 22 0 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAAA............................................................................................ 26 1 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTCT............................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
............................................................AGGCAAGATGCTTGCATAGCT................................................................................................. 21 1 1 2.00 2 0 0 0 0 2 0
............................................................AGGCAAGATGCTGGCACAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
................................................................................................TGCTATGCCAACATATTGCCATA........................................................... 23 1 1 2.00 2 0 2 0 0 0 0
................................................................................................TGCTATGCCAACATATTGTCATC........................................................... 23 1 1 2.00 2 1 1 0 0 0 0
............................................................AGGCAAGATGCTTGCATAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAGGCAAGATGCTGGCATAGCTGT............................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0
............................................................AGGCAAGATGCTGGCAT..................................................................................................... 17 0 1 2.00 2 2 0 0 0 0 0
............................................................AGCCAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
............................................................GGGCAAGATGCTGGCATAGCT................................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
............................................................AGGTAAGATGCTGGCATAGCT................................................................................................. 21 1 1 2.00 2 0 1 0 0 1 0
............................................................AGGCAAGATGCTGGCGTAGCTG................................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTC.............................................................................................. 24 1 1 2.00 2 0 2 0 0 0 0
...................................................................................................TATGCCAACATATTGCCATCTT......................................................... 22 0 1 2.00 2 2 0 0 0 0 0
............................................................AGGCAAGACGCTGGCATAGCTG................................................................................................ 22 1 1 2.00 2 1 0 0 1 0 0
............................................................AGACAAGATGCTGGCATAGCTGT............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................CTGCTATGCCAACATATTGCCATT........................................................... 24 1 1 2.00 2 0 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCAA................................................................................................ 22 2 3 1.67 5 4 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTAAA.............................................................................................. 24 3 3 1.33 4 3 0 0 0 1 0
............................................................AGGCAAGATGCTGGCATAGCTGTTAAACTGAGAAC................................................................................... 35 0 1 1.00 1 0 1 0 0 0 0
............................................................AAGCAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAAT............................................................................................ 26 2 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGCAAG............................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0
............................................................AGGCCAGATGCTGGCATAGCT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTATGCCAACATATTGCCATCT.......................................................... 22 0 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAC.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCCGGCATAGCTG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAATATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTAT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTCGCATAGCTGT............................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAC............................................................................................. 25 2 1 1.00 1 0 0 1 0 0 0
..................................GCTCCTGTAACTTGGAACTGGAGAGG...................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0
............................................................TGGCAAGATGCTGGCATAGCTGTTTT............................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0
.................................................................................................GCTATGCCAACATATTGCCATCA.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................CTGCTATGCCAACATATTGCCATC........................................................... 24 0 1 1.00 1 0 1 0 0 0 0
................................................................................................TGCTATGCCAACATATTGCCATCAAG........................................................ 26 3 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGACGCTGGCATAGCTGA............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGA.................................................................................................. 20 1 4 1.00 4 2 2 0 0 0 0
.................................................................AGATGCTGGCATAGCTGT............................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCCG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..........................................AACTTGGACCTGGAGAGGA..................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTAC............................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.................................................................................................GCTATGCCAACATATTGCCATA........................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................TGTAACTTGGACCTGGAGAGGA..................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATCGCTG................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
............................................................AGGCAGGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
................................................................................................TGCTATGTCAACATATTGCCATC........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCGAGATGCTGGCATAGCT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCATGATGCTGGCATAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................CTATGCCAACATATTGCCACC........................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAACT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................GCTATGCCAACTTATTGCCATC........................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTAG............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATCGCTGT............................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGTCAAGATGCTGGCATAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCCTAGCTGG............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATACTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGTAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAAAT........................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
.............................................................GGCAAGATGCTGGCCTAGCTG................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTAAG........................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGACATAGCTGTTGAAC.......................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
............................................................AGACAAGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAGGATGCTGGCATAGCTGA............................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTG.............................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGGTAAT........................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
............................TGTGTTGCTCCTGTAACTTGGAACTGGAGAGG...................................................................................................................... 32 0 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTTATAT.......................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
............................................................GGGCAAGATGCTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGGTGCTGGCATAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.........................................TAACTTGGAACTGGAGAGG...................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TGCCATGCCAACATATTGCCATC........................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGTTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTCA............................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..........................................................GGAGGCAAGATGCTGGCATAGC.................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCA...................................................................................................... 16 0 10 1.00 10 8 1 1 0 0 0
..................................................................................TTAAACTGAGAACCTGCTATGCC......................................................................... 23 0 1 1.00 1 0 0 0 0 0 1
...............................................................................................CTGCTATGCCAACATATTGCCAT............................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................ATTTGCTATGCCAACATATTGCCATC........................................................... 26 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TGCTATCCCAACATATTGCCATC........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TGCTATGCTAACATATTGCCATC........................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAGA............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
............................................................ACGCAAGATGCTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCTTAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCCTAGCTGT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGACATAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................ATTTGCTATGCCAACATATTGCCATCA.......................................................... 27 3 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAAAC........................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGGTGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGTT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGTAAGATGCTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
................................................................................................TGCTATGCCAACATATTCCCATC........................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................TATGCCAACATATTGCCATC........................................................... 20 0 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCCGT............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................GGGCAAGATGCTGGCATAGCTGTT.............................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAG.............................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCCTAGCTGC............................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
................................................................................................TGCTATGCCAACATCTTGCCATC........................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTAG............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGTTGGCATAGCTGA............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATATCTGA............................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.............................................................GGCAAGATGCTGGCATAGCTT................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTATAA........................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATGGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGACGCTGGCATAGCTGT............................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCTTAGCTGT............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................AGGCCAGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTAGCATAGCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGTTG................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
...........................................................AAGGCAAGATGCTGGCATAGC.................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCGAGATGCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGTCT............................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0
............................................................AGGCAAGATTCTGGCATAGCTG................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................ATTAGGCAAGATGCTGGCATAGCTG................................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAAT............................................................................................. 25 3 3 0.67 2 1 1 0 0 0 0
............................................................TGGCAAGATGCTGGCATAGC.................................................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...............................................................CAAGATGCTGGCATAGCT................................................................................................. 18 0 2 0.50 1 0 1 0 0 0 0
.................................................................AGATGCTGGCATAGCTG................................................................................................ 17 0 2 0.50 1 0 0 1 0 0 0
............................................................AAGCAAGATGCTGGCATAGCT................................................................................................. 21 1 2 0.50 1 0 1 0 0 0 0
............................................................AGCCAAGATGCTGGCATAGCT................................................................................................. 21 1 2 0.50 1 0 1 0 0 0 0
................................................................................................TGCTATGTTAACATATTGCCATC........................................................... 23 2 2 0.50 1 1 0 0 0 0 0
............................................................AGGCAAGATGCAGGCATAGCTA................................................................................................ 22 2 2 0.50 1 0 0 0 0 1 0
............................................................AGGCAAGCTGCTGGCATAGCTGC............................................................................................... 23 2 2 0.50 1 0 0 0 0 1 0
..........................................AACTTGGACCTGGAGAGG...................................................................................................................... 18 1 11 0.45 5 4 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCAT................................................................................................ 22 2 5 0.40 2 0 2 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGAGT............................................................................................. 25 3 3 0.33 1 1 0 0 0 0 0
................................................................AAGATGCTGGCATAGCT................................................................................................. 17 0 3 0.33 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTTAAA............................................................................................. 25 3 3 0.33 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCACAGCTG................................................................................................ 22 1 3 0.33 1 0 0 1 0 0 0
.............................................................GGCAAGATGCTGGCAT..................................................................................................... 16 0 4 0.25 1 1 0 0 0 0 0
.......................................TGTAATTTGGACCTGGAGAGG...................................................................................................................... 21 2 4 0.25 1 0 1 0 0 0 0
.................................................................AGATGCTGGCATAGCT................................................................................................. 16 0 4 0.25 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGCACAGCTT................................................................................................ 22 2 5 0.20 1 0 0 0 1 0 0
............................................................AGGCAAGATGCTGGCACAGCTGTAT............................................................................................. 25 3 5 0.20 1 0 0 1 0 0 0
............................................................AGGCAAGATGCTGGCATAGCTGGGC............................................................................................. 25 3 5 0.20 1 0 0 0 1 0 0
............................................................AGGCAAGATGCTAACATAGC.................................................................................................. 20 2 5 0.20 1 0 1 0 0 0 0
............................................................ATGCCAGATGCTGGCATAGCT................................................................................................. 21 2 7 0.14 1 0 0 0 1 0 0
............................................................AGGCAATATGCTGGCATA.................................................................................................... 18 1 8 0.13 1 0 1 0 0 0 0
...........................................CCTTGGAACTGGAGAGGAG.................................................................................................................... 19 1 12 0.08 1 0 0 0 1 0 0
......................................ATTTAACTTGGACCTGGAGAGG...................................................................................................................... 22 3 15 0.07 1 1 0 0 0 0 0
...........................................ACTTGGACCTGGAGAGG...................................................................................................................... 17 1 20 0.05 1 0 1 0 0 0 0
............................................................AGGCAAGATGCTGGC....................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0
............................................................AGGCAAGATGCTGGCATAAG.................................................................................................. 20 2 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

CCTTTTCATTTTGTGACTTCTCCGTACCACACAACGAGGACATTGAACCTTGACCTCTCCTCCGTTCTACGACCGTATCGACAATTTGACTCTTGGACGATACGGTTGTATAACGGTAGAAAGAACAGACTGTCGTCGGTACCGGTGGACGCACGACGAGGAGGTACGTGACGAGGTC

********************************************((((.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))))))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:20 AM