ID:

ssc-mir-30e

Coordinate:

chr6:157476655-157476734 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-57.0 -56.0 -56.0

Sense Strand Reads

CCTCCTTCCTAGAGAGAGCGCCTCACTGCGTCCGTTCTCTCCGGGCAGTCTTTGCCACTGTAAACATCCTTGACTGGAAGCTGTGAGGCGTTCCCAGGAGCTTTCAGTCGGATGTTTACAGCGGCAGGCTGCCACGGTCGTCCCGCGGCGCGGCGCCTCTGAAACACTGCAGGTTTGTGC

*******************************************((((((((..(((.((((((((((((..(((((((((((.((.((....))))..))))))))))))))))))))))).)))))))))))....*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
SRR1274763

ovary
SRR1274764

testes
SRR139075

testes
SRR139076

testes
..........................................................TGTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 0 1 43088.00 43088 15708 11130 6311 5474 3590 875
..........................................................TGTAAACATCCTTGACTGGAAGC................................................................................................... 23 0 1 18061.00 18061 9664 6807 528 332 609 121
....................................................................................................CTTTCAGTCGGATGTTTACAGC.......................................................... 22 0 1 3092.00 3092 1192 824 376 412 263 25
...........................................................GTAAACATCCTTGACTGGAAGCT.................................................................................................. 23 0 1 2482.00 2482 877 560 460 324 219 42
....................................................................................................CTTTCAGTCGGATGTTTACAGT.......................................................... 22 1 1 2124.00 2124 1162 581 63 18 269 31
....................................................................................................CTTTCAGTCGGATGTTTACAGCA......................................................... 23 1 1 1378.00 1378 826 420 11 10 99 12
..........................................................TGTAAACATCCTTGACTGGAAG.................................................................................................... 22 0 1 1200.00 1200 451 253 82 67 296 51
..........................................................TGTAAACATCCTTGACTGGAAGCTT................................................................................................. 25 1 1 1043.00 1043 154 107 185 240 244 113
..........................................................TGTAAACATCCTTGACTGGA...................................................................................................... 20 0 1 898.00 898 123 66 205 411 80 13
....................................................................................................CTTTCAGTCGGATGTTTACA............................................................ 20 0 1 762.00 762 386 271 18 8 72 7
..........................................................TGTAAACATCCTTGACTGGAAGA................................................................................................... 23 1 1 653.00 653 220 91 39 45 214 44
....................................................................................................CTTTCAGTCGGATGTTTACAG........................................................... 21 0 1 645.00 645 197 136 92 49 145 26
..........................................................TGTAAACATCCTTGACTGGAA..................................................................................................... 21 0 1 530.00 530 245 113 50 63 53 6
..........................................................TGTAAACATCCTTGACTGG....................................................................................................... 19 0 1 503.00 503 240 124 27 66 44 2
...........................................................GTAAACATCCTTGACTGGAAGC................................................................................................... 22 0 1 438.00 438 233 157 12 9 21 6
....................................................................................................CTTTCAGTCGGATGTTTACAGTT......................................................... 23 2 1 338.00 338 164 128 17 9 18 2
..........................................................TGTAAACATCCTTGACTGGAAGCA.................................................................................................. 24 1 1 291.00 291 76 36 11 14 132 22
..........................................................TGTAAACATCCTTGACTGGAAGT................................................................................................... 23 1 1 224.00 224 109 49 23 32 10 1
.....................................................................................................TTTCAGTCGGATGTTTACAGC.......................................................... 21 0 1 176.00 176 55 26 34 32 26 3
.....................................................................................................TTTCAGTCGGATGTTTACAGT.......................................................... 21 1 1 172.00 172 92 58 1 3 15 3
....................................................................................................CTTTCAGTCGGATGTTTAC............................................................. 19 0 1 158.00 158 35 27 19 28 44 5
..........................................................TGTAAACATCCTTGAC.......................................................................................................... 16 0 1 136.00 136 0 0 96 34 5 1
..........................................................TGTAAACATCCTTGACTGGAAA.................................................................................................... 22 1 2 131.50 263 124 65 16 30 22 6
..........................................................TGTAAACATCTTTGACTGGAAGCT.................................................................................................. 24 1 1 128.00 128 12 4 3 3 85 21
..........................................................TGTAAACATTCTTGACTGGAAGCT.................................................................................................. 24 1 1 116.00 116 12 2 3 3 78 18
..........................................................TGTAAACATCCTTGACTGGAAGCTA................................................................................................. 25 1 1 114.00 114 20 13 6 4 45 26
...........................................................GTAAACATCCTTGACTGGAAGCTT................................................................................................. 24 1 1 105.00 105 15 16 24 21 23 6
...........................................................GTAAACATCCTTGACTGGAAGCTGT................................................................................................ 25 0 1 95.00 95 50 36 2 3 4 0
.....................................................................................................TTTCAGTCGGATGTTTACAGCA......................................................... 22 1 1 95.00 95 68 18 1 1 6 1
....................................................................................................CTTTCAGTCGGATGTTTACAGA.......................................................... 22 1 1 94.00 94 20 20 12 15 26 1
....................................................................................................CTTTCAGTCGGATGTTTACAGCT......................................................... 23 1 1 87.00 87 35 39 4 6 2 1
..........................................................TGTAAACATCCTTGACTGGAAGCTTT................................................................................................ 26 1 1 76.00 76 15 14 4 4 25 14
..........................................................TGTAAACATCCTTGACTGGAAGCC.................................................................................................. 24 1 1 70.00 70 28 11 5 11 12 3
..........................................................TGTAAACATCCTTGACTGGAAT.................................................................................................... 22 1 1 69.00 69 35 26 1 0 4 3
..........................................................TGTAAACATCCCTGACTGGAAGCT.................................................................................................. 24 1 3 56.00 168 9 13 4 1 115 26
.........................................................CTGTAAACATCCTTGACTGGAAGCT.................................................................................................. 25 0 1 56.00 56 23 10 1 5 11 6
....................................................................................................CTTTCAGTCGGATGTTTACAGTA......................................................... 23 2 2 54.50 109 56 34 16 2 1 0
..........................................................TGTAAACATCTTTGACTGGAAGC................................................................................................... 23 1 1 47.00 47 10 4 1 2 25 5
...........................................................GTAAACATCCTTGACTGGAAGCTG................................................................................................. 24 0 1 46.00 46 11 14 2 1 16 2
...........................................................GTAAACATCCTTGACTGGAAGCA.................................................................................................. 23 1 1 44.00 44 4 1 2 2 29 6
.....................................................................................................TTTCAGTCGGATGTTTACAGCT......................................................... 22 1 1 44.00 44 29 9 2 1 3 0
..........................................................TGTAAACATCCTTGACTGGAAGCG.................................................................................................. 24 1 1 38.00 38 6 1 11 9 9 2
...........................................................GTAAACATCCTTGACTGGAAGA................................................................................................... 22 1 1 37.00 37 9 1 1 2 22 2
..........................................................TGTAAACATTTTTGACTGGAAGCT.................................................................................................. 24 2 1 33.00 33 0 0 0 0 26 7
..........................................................TGTAAACATTCTTGACTGGAAGC................................................................................................... 23 1 1 32.00 32 7 5 0 2 17 1
.....................................................................................................TTTCAGTCGGATGTTTACAG........................................................... 20 0 1 32.00 32 9 7 2 1 13 0
..........................................................TGTAAACATCCCTGACTGGAAGC................................................................................................... 23 1 3 31.00 93 31 19 0 0 35 8
..........................................................CGTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 31.00 31 16 8 1 0 6 0
..........................................................TGTAAACATCCTTGACTGGAAGCTAT................................................................................................ 26 1 1 30.00 30 4 1 1 0 13 11
..........................................................TGTAAACATCCTTGACTGGAAGAA.................................................................................................. 24 2 1 30.00 30 1 4 0 0 17 8
.....................................................................................................TTTCAGTCGGATGTTTACA............................................................ 19 0 1 30.00 30 11 12 0 0 7 0
..........................................................TGTAAACATCCTTGACTGGAAGCTTA................................................................................................ 26 2 1 25.00 25 5 9 2 1 6 2
....................................................................................................CTTTCAGTCGGATGTTTACAT........................................................... 21 1 1 25.00 25 12 12 0 0 1 0
............................................................TAAACATCCTTGACTGGAAGCT.................................................................................................. 22 0 1 24.00 24 8 5 4 2 3 2
..........................................................TGTAAACATCCTTGACTGGT...................................................................................................... 20 1 1 23.00 23 1 1 9 9 3 0
.........................................................CTGTAAACATCCTTGACTGGAAGC................................................................................................... 24 0 1 23.00 23 12 7 0 0 3 1
....................................................................................................CTTTCAGTCGGATGTTTACAA........................................................... 21 1 1 23.00 23 4 4 6 0 9 0
..........................................................TGTAAACATCCTTGACTGGAAGCTG................................................................................................. 25 0 1 23.00 23 1 6 0 1 9 6
..........................................................TGCAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 23.00 23 8 6 2 0 6 1
.....................................................................................................TTTCAGTCGGATGTTTACAGTT......................................................... 22 2 1 22.00 22 11 8 1 0 2 0
..........................................................TGTAAACATCCTTGACCGGAAGCT.................................................................................................. 24 1 1 21.00 21 8 8 3 0 0 2
....................................................................................................CTTTCAGTCGGATGTTTA.............................................................. 18 0 1 21.00 21 6 3 0 0 12 0
..........................................................TGTAAACATCCTTGACTGGACGCT.................................................................................................. 24 1 1 20.00 20 1 2 2 0 12 3
..........................................................TGTGAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 18.00 18 6 7 1 1 2 1
..........................................................TGTAAACATCCTTGGCTGGAAGCT.................................................................................................. 24 1 1 18.00 18 7 7 0 1 3 0
..........................................................CGTAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 18.00 18 10 8 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGTT.................................................................................................. 24 1 1 17.00 17 6 4 1 1 5 0
..........................................................TGTAAACATCCTTGACTG........................................................................................................ 18 0 1 17.00 17 6 2 2 2 5 0
.......................................................ATTTGTAAACATCCTTGACTGGAAGCT.................................................................................................. 27 3 1 17.00 17 12 5 0 0 0 0
..........................................................TGTAAACATCTTTGACTGGAAG.................................................................................................... 22 1 1 17.00 17 2 1 1 0 12 1
..........................................................TGTAAACATCCTTGACTGA....................................................................................................... 19 1 1 17.00 17 0 0 7 9 1 0
...........................................................GTAAACATTCTTGACTGGAAGCT.................................................................................................. 23 1 1 16.00 16 0 2 0 0 14 0
..........................................................TGTAAACATCCTTGACTGGAAGCTGT................................................................................................ 26 0 1 16.00 16 8 4 0 1 3 0
..........................................................TGTAAACATCCTTGACTAGAAGCT.................................................................................................. 24 1 1 16.00 16 5 7 2 0 1 1
..........................................................TGTAAACATCCTTGACTGGCAGCT.................................................................................................. 24 1 1 16.00 16 6 0 0 0 3 7
..........................................................TGTAAACACCCTTGACTGGAAGCT.................................................................................................. 24 1 1 16.00 16 6 4 2 2 1 1
.......................................................................................................TCAGTCGGATGTTTACAGT.......................................................... 19 1 1 15.00 15 5 1 0 0 9 0
..........................................................AGTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 15.00 15 6 4 0 0 4 1
...................................................................................................GCTTTCAGTCGGATGTTTACAGT.......................................................... 23 1 1 15.00 15 8 7 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCTAA................................................................................................ 26 2 1 15.00 15 0 2 0 0 5 8
..........................................................TGTAAACATCCTTGATTGGAAGCT.................................................................................................. 24 1 1 15.00 15 11 2 0 1 1 0
..........................................................TGTAACCATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 15.00 15 5 2 2 0 4 2
..........................................................TGTAAACATTCTTGACTGGAAGCTT................................................................................................. 25 2 1 14.00 14 0 0 0 0 10 4
..........................................................TGTAAATATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 14.00 14 6 6 0 1 1 0
....................................................................................................CTTTCAGTCGGATGTTTACACCA......................................................... 23 2 1 13.00 13 7 6 0 0 0 0
.....................................................................................................TTTCAGTCGGATGTTTACAGA.......................................................... 21 1 1 13.00 13 6 3 2 0 2 0
..........................................................TGTAAACATCCTTGACTGGAGGCT.................................................................................................. 24 1 1 13.00 13 4 7 0 0 2 0
..........................................................TGTAGACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 13.00 13 3 3 2 1 4 0
...........................................................GTAAACATCCTTGACTGGA...................................................................................................... 19 0 1 13.00 13 2 3 3 3 2 0
...........................................................GTAAACATCCTTGACTGGAAG.................................................................................................... 21 0 1 13.00 13 5 2 0 0 6 0
..........................................................TGTAAACATCTTTGACTGGA...................................................................................................... 20 1 1 12.00 12 0 0 2 6 4 0
...........................................................GTAAACATCCTTGATTGGAAGCT.................................................................................................. 23 1 1 12.00 12 0 0 0 0 11 1
..........................................................TGTAAACATCTTTGACTGGAAGCTT................................................................................................. 25 2 1 12.00 12 0 1 0 0 9 2
..........................................................TGTAAACATCCTTAACTGGAAGCT.................................................................................................. 24 1 1 12.00 12 5 4 0 0 3 0
..........................................................TGTAAACATCCTTGACTGGAAGGT.................................................................................................. 24 1 1 12.00 12 7 5 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGGAGCT.................................................................................................. 24 1 1 11.00 11 6 4 1 0 0 0
...........................................................GTAAACATCCTTGACTGGAAGCTA................................................................................................. 24 1 1 11.00 11 3 0 1 0 3 4
..........................................................TGTACACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 11.00 11 0 0 0 3 7 1
....................................................................................................CTTTCAGTCGGATGTTTACACT.......................................................... 22 2 1 11.00 11 5 4 2 0 0 0
...................................................................................................GCTTTCAGTCGGATGTTTACAGC.......................................................... 23 0 1 10.00 10 3 7 0 0 0 0
..........................................................TGTAAACATTCTTGACTGGAA..................................................................................................... 21 1 1 10.00 10 0 0 3 7 0 0
..........................................................TGTAAACATCCTTGGCTGGAAGC................................................................................................... 23 1 1 10.00 10 6 4 0 0 0 0
..........................................................TGTATACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 10.00 10 2 4 1 0 1 2
..........................................................TGTAAACATCCTTGACTGGAAGCCT................................................................................................. 25 2 1 10.00 10 0 0 0 8 0 2
..........................................................TGTAAACGTCCTTGACTGGAAGCT.................................................................................................. 24 1 1 10.00 10 4 4 0 0 2 0
..........................................................TGTAAGCATCCTTGACTGGAAGC................................................................................................... 23 1 1 10.00 10 6 4 0 0 0 0
...........................................................GTAAACATCCTTGACTGGAAGCTGA................................................................................................ 25 1 1 10.00 10 3 7 0 0 0 0
.......................................................ATTTGTAAACATCCTTGACTGGAAGC................................................................................................... 26 3 1 10.00 10 6 4 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAACT.................................................................................................. 24 1 1 9.00 9 4 1 0 2 1 1
..........................................................TGTAAACATTTTTGACTGGAAGCTT................................................................................................. 25 3 1 9.00 9 0 0 0 0 7 2
..........................................................TGTAAACATCCTTGACTGGAAGAT.................................................................................................. 24 1 1 9.00 9 6 2 0 0 0 1
.....................................................................................................TTTCAGTCGGATGTTTACAGCAT........................................................ 23 2 2 9.00 18 9 7 0 0 2 0
..........................................................TCTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 9.00 9 2 1 4 0 1 1
..........................................................TGTAAACATCCTTGACTGGAAGCTTTT............................................................................................... 27 2 1 9.00 9 1 1 0 0 3 4
.........................................................CTGTAAACATCCTTGACTGGAAG.................................................................................................... 23 0 1 9.00 9 0 0 0 0 7 2
....................................................................................................CTTTCAGTCGGATGTTTACACC.......................................................... 22 1 1 8.00 8 5 2 0 1 0 0
.......................................................................................................TCAGTCGGATGTTTACAGC.......................................................... 19 0 1 8.00 8 3 2 0 0 3 0
..........................................................TGTAAACATCCTTGACTGCAAGCT.................................................................................................. 24 1 1 8.00 8 3 1 0 1 2 1
..........................................................TGTAAACATCCTTGACTGGAGT.................................................................................................... 22 2 1 8.00 8 6 0 2 0 0 0
............................................................TAAACATCCTTGACTGGAAGC................................................................................................... 21 0 1 8.00 8 3 5 0 0 0 0
....................................................................................................CTTTCAGTCGGATGTTTACACA.......................................................... 22 2 1 8.00 8 5 3 0 0 0 0
..........................................................TGTAAACATCCTTGACTCGAAGCT.................................................................................................. 24 1 1 8.00 8 3 2 2 0 0 1
..........................................................TGTAAACATCCATGACTGGAAGCT.................................................................................................. 24 1 1 8.00 8 4 3 0 0 1 0
..........................................................TGTAAACATCCTTGACTGGAGGC................................................................................................... 23 1 1 8.00 8 6 2 0 0 0 0
..........................................................TGTAAACATCCTTGATTGGAAGC................................................................................................... 23 1 1 8.00 8 5 2 0 0 0 1
..........................................................TGTAAACATCCTTGACTGTAAGCT.................................................................................................. 24 1 1 8.00 8 5 0 1 1 1 0
..........................................................TGCAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 8.00 8 4 3 0 0 0 1
...........................................................GTAAACATCTTTGACTGGAAGCT.................................................................................................. 23 1 1 8.00 8 0 3 0 1 3 1
..........................................................TGTAAACATCCTTAACTGGAAGC................................................................................................... 23 1 1 7.00 7 1 5 1 0 0 0
..........................................................TATAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 7.00 7 3 1 1 0 2 0
..........................................................TGTAAACATCCCTGACTGGAAG.................................................................................................... 22 1 3 7.00 21 3 1 0 0 13 4
..........................................................TGTAAACATCCTTGACTGAAAGCT.................................................................................................. 24 1 1 7.00 7 4 1 1 0 0 1
..........................................................TGTAAACATCCTTGACTGGAT..................................................................................................... 21 1 1 7.00 7 0 0 4 3 0 0
....................................................................................................CTTTCAGTCGGATGTTTACAGTTT........................................................ 24 3 1 7.00 7 4 3 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCTC................................................................................................. 25 1 1 7.00 7 3 3 0 0 0 1
..........................................................TGTAGACATCCTTGACTGGAAGC................................................................................................... 23 1 1 7.00 7 2 4 0 0 1 0
..........................................................TATAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 7.00 7 4 3 0 0 0 0
..........................................................AGTAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 7.00 7 4 2 0 0 1 0
..........................................................TGTAAACATCCTTGACTGGGAGC................................................................................................... 23 1 1 7.00 7 3 1 0 0 3 0
....................................................................................................CTTTCAGTCGGATGTTTACAGCG......................................................... 23 0 1 7.00 7 5 1 0 0 1 0
..........................................................TGTAAGCATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 7.00 7 4 2 0 1 0 0
..........................................................TGTAAACATCCTTGACTGGAAC.................................................................................................... 22 1 1 7.00 7 3 3 0 1 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCCA................................................................................................. 25 2 1 7.00 7 0 1 0 0 5 1
..........................................................TGTAAACATCCTTGACTTGAAGCT.................................................................................................. 24 1 1 6.00 6 1 2 0 1 2 0
..........................................................TGTAAACATCCTTGACTAGAAGC................................................................................................... 23 1 1 6.00 6 3 2 0 0 1 0
..........................................................TGTAAACGTCCTTGACTGGAAGC................................................................................................... 23 1 1 6.00 6 4 2 0 0 0 0
....................................................................................................CTTTCAGTCGGATGTTTACAGCAT........................................................ 24 2 2 6.00 12 5 5 0 0 2 0
..........................................................TGTAAACATCCTTGACTGGAATCT.................................................................................................. 24 1 1 6.00 6 0 0 0 1 4 1
..........................................................TGTAAACATTCTTGACTGGAAG.................................................................................................... 22 1 1 6.00 6 2 0 1 0 3 0
..........................................................TGTAAACATCCTTGCCTGGAAGCT.................................................................................................. 24 1 1 6.00 6 1 0 0 1 3 1
..........................................................TGAAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 6.00 6 2 2 0 0 1 1
..........................................................TGTAAACCTCCTTGACTGGAAGCT.................................................................................................. 24 1 1 6.00 6 3 2 0 0 1 0
..........................................................TGTAAATATCCTTGACTGGAAGC................................................................................................... 23 1 1 6.00 6 3 3 0 0 0 0
..........................................................TGTAAACATCCTTGACCGGAAGC................................................................................................... 23 1 1 6.00 6 3 3 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGG................................................................................................... 23 1 1 6.00 6 3 1 0 0 2 0
..........................................................TGTAAACATTCTTGACTGGA...................................................................................................... 20 1 2 5.50 11 1 0 4 5 1 0
...........................................................GTAAACATCCTTGACTGGAAGCC.................................................................................................. 23 1 1 5.00 5 0 2 1 0 1 1
..........................................................TGTAAACATCCTTGACGGGAAGCT.................................................................................................. 24 1 1 5.00 5 3 1 0 0 1 0
..........................................................TGTAAACATCCTTGACTGTAAGC................................................................................................... 23 1 1 5.00 5 3 2 0 0 0 0
..........................................................TGTGAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 5.00 5 1 3 0 0 1 0
......................................................................................................TTCAGTCGGATGTTTACAGC.......................................................... 20 0 1 5.00 5 3 0 0 1 1 0
..........................................................TGTAAACACCCTTGACTGGAAGC................................................................................................... 23 1 1 5.00 5 1 4 0 0 0 0
.....................................................................................................TTTCAGTCGGATGTTTAC............................................................. 18 0 1 5.00 5 1 0 2 0 2 0
..........................................................TGTAAACATTCTTGACTGGAAGA................................................................................................... 23 2 1 5.00 5 2 0 1 0 2 0
..........................................................TGTAAACATCTTTGACTGGAAGA................................................................................................... 23 2 1 5.00 5 0 0 1 0 3 1
..........................................................TGTAAACATCCTTGACTGT....................................................................................................... 19 1 2 5.00 10 1 5 2 1 1 0
..........................................................TGTAAACATCCTTGACAGGAAGCT.................................................................................................. 24 1 1 5.00 5 3 1 0 0 1 0
......................................................................................................TTCAGTCGGATGTTTACAGT.......................................................... 20 1 1 5.00 5 3 0 0 0 2 0
...........................................................GTAAACATCCTTGACTGGAAGCTTT................................................................................................ 25 1 1 5.00 5 2 0 1 0 2 0
..........................................................TGAAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 5.00 5 4 0 1 0 0 0
..........................................................TGTAAACATCCTTGACTGAAAGC................................................................................................... 23 1 1 5.00 5 4 1 0 0 0 0
...........................................................GTAAACATCCTTGACTGGAAGCG.................................................................................................. 23 1 1 5.00 5 0 0 0 2 3 0
..........................................................TGTAAACATCCTTGACTGGCAGC................................................................................................... 23 1 1 5.00 5 1 1 0 0 2 1
....................................................................................................CTTTCAGTCGGATGTTTACAGCC......................................................... 23 1 3 4.67 14 7 6 0 1 0 0
..........................................................TGTAAACATCCCTGACTGGAAGCTT................................................................................................. 25 2 3 4.67 14 0 0 0 0 8 6
..........................................................TGTAAACAATTTTGACTGGAAGCT.................................................................................................. 24 3 3 4.67 14 0 0 0 0 10 4
.........................................................CTGTAAACATCCTTGACTGGA...................................................................................................... 21 0 1 4.00 4 3 1 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGTAGCT.................................................................................................. 24 1 1 4.00 4 1 1 1 0 1 0
..........................................................TGTAAAAATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 4.00 4 2 2 0 0 0 0
..........................................................TGTAAACATTTTTGACTGGAAG.................................................................................................... 22 2 1 4.00 4 0 0 0 0 4 0
...................................................................................................CCTTTCAGTCGGATGTTTACAGT.......................................................... 23 2 1 4.00 4 2 2 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGTA.................................................................................................. 24 2 1 4.00 4 1 3 0 0 0 0
...........................................................GTAAACATCCTTGACTGGAAGAA.................................................................................................. 23 2 1 4.00 4 0 0 0 0 4 0
...........................................................GTAAACATCCTTGACTGGGAGCT.................................................................................................. 23 1 1 4.00 4 1 1 0 0 1 1
...........................................................GTAAACATCCTTGACTGG....................................................................................................... 18 0 1 4.00 4 2 1 1 0 0 0
.........................................................CTGTAAACATCCTTGACTGGAAGA................................................................................................... 24 1 1 4.00 4 1 0 0 0 3 0
................................................................CATCCTTGACTGGAAGCT.................................................................................................. 18 0 1 4.00 4 3 1 0 0 0 0
..........................................................TGTAAACATCCTTGACAGGAAGC................................................................................................... 23 1 1 4.00 4 1 2 0 0 1 0
..........................................................TGTAAACTTCCTTGACTGGAAGCT.................................................................................................. 24 1 1 4.00 4 2 2 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGTA..................................................................................................... 21 1 1 4.00 4 0 0 0 1 3 0
..........................................................TGCAAACATCCTTGACTGGAAGCTT................................................................................................. 25 2 1 4.00 4 0 2 0 2 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCTGA................................................................................................ 26 1 1 4.00 4 2 0 0 0 2 0
..........................................................TGTAAACATCCTTGACTGGAAGCTATT............................................................................................... 27 2 1 4.00 4 3 1 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGATGCT.................................................................................................. 24 1 1 4.00 4 2 1 0 0 1 0
..........................................................TGTAAACATCCTTGACTGGAAGCTTTA............................................................................................... 27 2 1 4.00 4 0 1 1 0 1 1
.....................................................................................................CTTCAGTCGGATGTTTACAGC.......................................................... 21 1 1 4.00 4 0 1 0 0 3 0
....................................................................................................CTTTCAGTCGGATGTTTACATT.......................................................... 22 2 1 4.00 4 3 1 0 0 0 0
..........................................................GGTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 4.00 4 0 0 0 1 3 0
.................................................................................................ATTCTTTCAGTCGGATGTTTACAGC.......................................................... 25 3 1 4.00 4 3 1 0 0 0 0
..........................................................TGTAAACATCCTAGACTGGAAGCT.................................................................................................. 24 1 3 3.67 11 3 3 1 0 3 1
....................................................................................................CTTTCAGTCGGATGTTTAA............................................................. 19 1 2 3.50 7 4 1 0 0 2 0
....................................................................................................TTTTCAGTCGGATGTTTACAGT.......................................................... 22 2 2 3.50 7 1 2 0 0 4 0
..........................................................GGTAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
..........................................................TGTAAACATTCTTGACTGGAAGT................................................................................................... 23 2 1 3.00 3 0 0 0 1 2 0
..........................................................TGTAAACATATTTGACTGGAAGCT.................................................................................................. 24 2 1 3.00 3 0 0 0 0 3 0
..........................................................TGTAAACATCCATGACTGGAAGC................................................................................................... 23 1 1 3.00 3 2 0 0 0 1 0
.......................................................................................................TCAGTCGGATGTTTACAGCGG........................................................ 21 0 1 3.00 3 1 0 0 0 2 0
..........................................................TTTAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 1 0 0 0 1 1
.......................................................AAATGTAAACATCCTTGACTGGAAGA................................................................................................... 26 3 1 3.00 3 0 0 0 0 0 3
..........................................................TGTAAACATCCTTTACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 0 2 0 0 1 0
......................................................................................................TTCAGTCGGATGTTTACAGCA......................................................... 21 1 1 3.00 3 1 1 0 0 0 1
.....................................................................................................TTTCAGTCGGATGTTTACAA........................................................... 20 1 1 3.00 3 0 1 0 0 2 0
....................................................................................................CTTTCAGTCGGATGTTTACAGCTT........................................................ 24 2 1 3.00 3 0 3 0 0 0 0
....................................................................................................CTTTCAGTCGGATGTTTAAAGC.......................................................... 22 1 1 3.00 3 1 1 0 0 1 0
...........................................................GTAAACATCCTTGACTGGAAGCTGAA............................................................................................... 26 2 1 3.00 3 1 0 0 0 0 2
...................................................................................................GCTTTCAGTCGGATGTTTACA............................................................ 21 0 1 3.00 3 1 0 0 0 2 0
....................................................................................................CTTTCGGTCGGATGTTTACAGC.......................................................... 22 1 1 3.00 3 1 1 0 0 0 1
.....................................................................................................TTTCAGTCGGATGTTTACAGTA......................................................... 22 2 2 3.00 6 4 1 1 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCCC................................................................................................. 25 2 1 3.00 3 1 0 0 2 0 0
...................................................................................................GCTTTCAGTCGGATGTTTACAG........................................................... 22 0 1 3.00 3 3 0 0 0 0 0
..........................................................TGTAAACAACCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAG..................................................................................................... 21 1 1 3.00 3 1 1 0 0 1 0
..........................................................TGTAAACATCCTTGTCTGGAAGC................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
....................................................................................................CTTTCAGTCGGATGTTTACAGAA......................................................... 23 2 1 3.00 3 1 0 1 0 1 0
....................................................................................................CTTTCAGTCGGATGCTTACAG........................................................... 21 1 1 3.00 3 0 1 0 0 2 0
..........................................................TGTAAAGATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 1 1 0 0 1 0
..........................................................TGTAAACATCCTTGACT......................................................................................................... 17 0 1 3.00 3 1 2 0 0 0 0
..........................................................TGTAAACATTTTTGACTGGAAGC................................................................................................... 23 2 1 3.00 3 0 1 0 0 0 2
..........................................................TGTAAACATCCTTGACTGGAAGCTTAT............................................................................................... 27 3 1 3.00 3 0 0 0 0 3 0
....................................................................................................CTTTCAGTCGGATGTTTATAGT.......................................................... 22 2 1 3.00 3 0 1 0 0 2 0
.....................................................................................................TTTCAGTCGGATGTTTACAGCTT........................................................ 23 2 1 3.00 3 2 1 0 0 0 0
..........................................................TGGAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 0 0 0 0 1 2
..........................................................TGTAAACACATTTGACTGGAAGCT.................................................................................................. 24 3 4 3.00 12 0 0 0 0 11 1
......................................................................................................TTCAGTCGGATGTTTACA............................................................ 18 0 1 3.00 3 0 1 0 0 2 0
..........................................................TGTAAACATCTTTGACTGGAA..................................................................................................... 21 1 1 3.00 3 0 0 1 0 2 0
..........................................................TGTAAACATCCTTGACTGGAAAC................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
..........................................................TCTAAACATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 1 1 0 1 0 0
..................................................................................GTGAGGCGTTCCCAGGAG................................................................................ 18 0 1 3.00 3 0 1 0 0 2 0
....................................................................................................CTTTCAGTCGGATGTTTACAGAT......................................................... 23 2 1 3.00 3 2 1 0 0 0 0
..........................................................TGTAAATATCCTTGACTGGAAGCTT................................................................................................. 25 2 1 3.00 3 0 1 0 0 2 0
..........................................................TGTAATCATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAACC................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
..........................................................TGTAAACATCCTTGAGTGGAAGCT.................................................................................................. 24 1 1 3.00 3 1 0 1 0 1 0
..........................................................TGTAAACATCCTTGACTGGACGC................................................................................................... 23 1 1 3.00 3 0 1 0 0 1 1
..........................................................TGTAAACAACCTTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 1 0 0 0 1 1
.......................................................................................................TCAGTCGGATGTTTACAGCA......................................................... 20 1 1 3.00 3 1 0 0 0 2 0
..................................................................................GTGAGGCGTTCCCAGGAGTTT............................................................................. 21 1 1 3.00 3 0 0 0 0 3 0
..........................................................TTTAAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 2 0 0 0 1 0
..........................................................TGTAACCATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 1 0 0 0 2 0
....................................................................................................TTTTCAGTCGGATGTTTACAGC.......................................................... 22 1 1 3.00 3 1 0 0 0 1 1
..........................................................TGTAAACATCATTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 1 0 1 1 0 0
..........................................................TGTAATCATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 3.00 3 2 1 0 0 0 0
....................................................................................................CTTTTAGTCGGATGTTTACAGC.......................................................... 22 1 1 3.00 3 3 0 0 0 0 0
....................................................................................................CTTTCAGTCGGATGTTTACATC.......................................................... 22 1 1 3.00 3 1 1 0 0 1 0
..........................................................TGTAAAAATCCTTGACTGGAAGC................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................GTAAACATCCTTGACTGGAAGCCT................................................................................................. 24 2 1 3.00 3 0 0 0 3 0 0
..........................................................TGTAAACATCCCTGACTGGAAGA................................................................................................... 23 2 3 2.67 8 1 0 0 0 4 3
....................................................................................................CTTTCAGTCGGATGTTT............................................................... 17 0 3 2.33 7 1 3 0 0 3 0
....................................................................................................CTTTCAGTCGGATTTTTACAG........................................................... 21 1 1 2.00 2 0 0 0 0 1 1
...........................................................GTAAACATCCTTGAC.......................................................................................................... 15 0 1 2.00 2 0 0 1 1 0 0
...........................................................GTAAACATTTTTGACTGGAAGCT.................................................................................................. 23 2 1 2.00 2 0 0 0 0 1 1
...........................................................GTAAACATCCTTAACTGGAAGCT.................................................................................................. 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................GTAAACATCCTTGACTCGAAGCT.................................................................................................. 23 1 1 2.00 2 0 0 1 0 1 0
....................................................................................................CTTTCAGTCGGATGTTTATAGC.......................................................... 22 1 1 2.00 2 1 0 0 0 1 0
....................................................................................................CTTTCAGTCAGATGTTTACA............................................................ 20 1 1 2.00 2 2 0 0 0 0 0
....................................................................................................CTTCCAGTCGGATGTTTACAGCA......................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGGAG.................................................................................................... 22 1 1 2.00 2 0 0 0 0 2 0
....................................................................................................CTTTCAGTCAGATGTTTACAGT.......................................................... 22 2 1 2.00 2 1 1 0 0 0 0
.............................................................AAACATCCTTGACTGGAAGCTGT................................................................................................ 23 0 1 2.00 2 0 0 0 1 0 1
..........................................................TATAAACATCCTTGACTGGAAGCTT................................................................................................. 25 2 1 2.00 2 0 0 0 0 1 1
..........................................................TGTAAACATCCTTGACTGGACGA................................................................................................... 23 2 1 2.00 2 0 0 0 0 1 1
..........................................................TGTAAACATCCCTGACTGGA...................................................................................................... 20 1 4 2.00 8 0 0 2 5 1 0
..........................................................TGTAAACATCCTTGACTGGAAGCTCA................................................................................................ 26 2 1 2.00 2 1 1 0 0 0 0
.........................................................ATGTAAACATCCTTGACTGGAAGCT.................................................................................................. 25 1 1 2.00 2 1 1 0 0 0 0
..........................................................TGTAAACATCTCTGACTGGAAGCT.................................................................................................. 24 2 3 2.00 6 0 0 0 0 5 1
.........................................................CTGTAAACATCCTTGACTGGAA..................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
..........................................................TGTAAACATGCTTGACTGGAAG.................................................................................................... 22 1 1 2.00 2 0 0 0 0 1 1
..........................................................TGTAAACATCCTTCACTGGAAGCT.................................................................................................. 24 1 1 2.00 2 1 0 0 0 1 0
.........................................................ATGTAAACATCCTTGACTGGAAGC................................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGAAGCTAC................................................................................................ 26 2 1 2.00 2 0 1 0 0 1 0
...........................................................GTAAACATCCTTGACTGGAAGCTTA................................................................................................ 25 2 1 2.00 2 0 0 1 0 0 1
....................................................................................................CTTTCAGTCGAATGTTTACAGCA......................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................TGTAAACATTCTTGACTGGAAGCTTT................................................................................................ 26 2 1 2.00 2 0 0 0 0 2 0
.........................................................TTGTAAACATCCTTGACTGGAAGCT.................................................................................................. 25 1 1 2.00 2 0 1 0 0 1 0
....................................................................................................CTTTCAGTCGGATGTTTACAGCAA........................................................ 24 2 1 2.00 2 0 0 0 0 2 0
..........................................................TGTAAACATCCTTGACTGGAAGAG.................................................................................................. 24 2 1 2.00 2 0 0 0 0 2 0
...........................................................GTAAACATCCTTGACTGGAAGCTGTT............................................................................................... 26 1 1 2.00 2 1 1 0 0 0 0
..........................................................TGTAAACATCCTTGACTCGAAGC................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................GTAAACCTCCTTGACTGGAAGCT.................................................................................................. 23 1 1 2.00 2 0 0 0 0 2 0
...........................................................GTAAACATCCTTGACTGGAA..................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
..........................................................TGTTAACATCCTTGACTGGAAGCT.................................................................................................. 24 1 1 2.00 2 1 1 0 0 0 0
....................................................................................................CTTTCAGTCGGATCTTTACAGT.......................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................TGTAAACATCCTTGGCTGGAAG.................................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0
....................................................................................................CTTACAGTCGGATGTTTACAGT.......................................................... 22 2 1 2.00 2 2 0 0 0 0 0
...........................................................GTAAACATCTTTGACTGGAAGC................................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0
....................................................................................................TTTTCAGTCGGATGTTTACAG........................................................... 21 1 1 2.00 2 0 0 0 0 2 0
.....................................................................................................TTTCAGTCGGATGTTTACAGCG......................................................... 22 0 1 2.00 2 2 0 0 0 0 0
..........................................................TGTAAACATCCTTGACTGGCAG.................................................................................................... 22 1 1 2.00 2 0 0 0 0 1 1
....................................................................................................CTTTCAGTCGTATGTTTACAGC.......................................................... 22 1 1 2.00 2 1 0 0 0 1 0
..........................................................TGTAAACATCTTTGACTGGAAGT................................................................................................... 23 2 1 2.00 2 0 0 0 1 1 0
..........................................................TGTAAACATCCTTGACTGGTAGC................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0

Anti-sense strand reads

GGAGGAAGGATCTCTCTCGCGGAGTGACGCAGGCAAGAGAGGCCCGTCAGAAACGGTGACATTTGTAGGAACTGACCTTCGACACTCCGCAAGGGTCCTCGAAAGTCAGCCTACAAATGTCGCCGTCCGACGGTGCCAGCAGGGCGCCGCGCCGCGGAGACTTTGTGACGTCCAAACACG

*******************************************((((((((..(((.((((((((((((..(((((((((((.((.((....))))..))))))))))))))))))))))).)))))))))))....*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR139076

testes
SRR066809

ovary
SRR066810

testes
..................................................................................................TCGAAGGTCAGCCTACAAATGT............................................................ 22 1 1 48.00 48 38 10 0 0
..................................................................................................TCGAAGGTCAGCTTACAAATGT............................................................ 22 2 1 20.00 20 17 0 2 1
...................................................................................................CGAAGGTCAGCCTACAAATGT............................................................ 21 1 1 12.00 12 8 1 2 1
....................................................................................................GAAGGTCAGCCTACAAATGT............................................................ 20 1 1 4.00 4 4 0 0 0
.................................................................................................TTCGAAGGTCAGCCTACAAATGT............................................................ 23 2 1 3.00 3 0 3 0 0
..................................................................................................TCGAAGGTCAGTCTACAAATGT............................................................ 22 2 3 2.67 8 4 3 0 1
...................................................................................................CGAAGGTCAGCTTACAAATGT............................................................ 21 2 1 2.00 2 1 0 1 0
..................................................................................................TCGCAGGTCAGCCTACCAATGT............................................................ 22 3 1 1.00 1 1 0 0 0
..................................................................................................TCGAAGGTCAGCCTACAAATG............................................................. 21 1 1 1.00 1 1 0 0 0
..................................................................................................TCGAATGTCAGCCTACAAATGT............................................................ 22 1 1 1.00 1 1 0 0 0
..................................................................................................TCGAAGGTCCGCCTACAAATGT............................................................ 22 2 1 1.00 1 0 1 0 0
..................................................................................................TCGAAGGTCAGGCTACAAATGT............................................................ 22 2 1 1.00 1 1 0 0 0
................................................................................................TTTCGAAGGTCAGCCTACAAATGT............................................................ 24 3 1 1.00 1 1 0 0 0
..................................................................................................ACGAAGGTCAGCCTACAAATGT............................................................ 22 2 1 1.00 1 1 0 0 0
...................................................................................................CGAAGGTCAGCCTACAGATGT............................................................ 21 2 1 1.00 1 1 0 0 0
...............................................................................................TTTTCGAAGGTCAGCCTACAAATGT............................................................ 25 3 1 1.00 1 0 1 0 0
................................................................................................TATCGAAGGTCAGCCTACAAATG............................................................. 23 3 1 1.00 1 1 0 0 0
..................................................................................................TCGAAGGTCAGCCCCCAAATGT............................................................ 22 3 7 0.86 6 4 2 0 0
...................................................................................................CGAAGGTCATCCTACAAATGT............................................................ 21 2 7 0.57 4 4 0 0 0
..................................................................................................TCGAAGGTCATCCTACAAATGT............................................................ 22 2 4 0.50 2 1 1 0 0
...................................................................................................AGAAGGTCAGCCTACAAATGT............................................................ 21 2 2 0.50 1 1 0 0 0
..................................................................................................CCGAAGGTCAGCCCACAAATGT............................................................ 22 3 7 0.43 3 0 0 2 1
...................................................................................................CGAAGGTCACCCTACAAATGT............................................................ 21 2 3 0.33 1 1 0 0 0
....................................................................................................GAAGGTCAGCTTACAAATGT............................................................ 20 2 12 0.25 3 2 1 0 0
..................................................................................................TCGAAGGTCAGCCCTCAAATGT............................................................ 22 3 4 0.25 1 1 0 0 0
..................................................................................................TCGAAGGTCATCCTACAAATG............................................................. 21 2 4 0.25 1 1 0 0 0
...................................................................................................CGAAGGTCAGTCTACAAATGT............................................................ 21 2 8 0.13 1 0 1 0 0
..................................................................................................ACGAAGGTCAGCCCACAAATGT............................................................ 22 3 8 0.13 1 0 0 0 1
...................................................................................................AGAAGGTCAGCCTACAAAAGT............................................................ 21 3 20 0.05 1 0 0 1 0

Generated: 09/01/2015 at 11:39 AM