ID:

ssc-mir-30d

 Coordinate:

chr4:6713518-6713596 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.3 -35.2 -34.6
mature

  1. ssc-mir-30d  chr4:6713525-6713548 +
  2. GL895891-2:160436-160459 -
star

Sense Strand Reads

TGACTGGCAGCATTTGTCATTTCCTCCTGTTAATTTGTTGTCTAGAAAGTCTGTTGTTGTAAACATCCCCGACTGGAAGCTGTAAGACATAGCTAAGCTTTCAGTCAGATGTTTGCTGCCACCGACTCTTCACAGGCATCATTTCGGTATAATTATATCTAAGAAGTGGAATTGGGGGG

******************************************..(((((((.((.((.(((((((((...(((((((((((..............))))))))))).))))))))).)).)).)))).)))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR066810

testes		 SRR139076

testes		 SRR1274763

ovary		 SRR1274764

testes
.........................................................TGTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 0 2 36491.50 72983 37233 12535 9650 8652 3663 1250
.........................................................TGTAAACATCCCCGACTGGAAGC................................................................................................... 23 0 2 29574.00 59148 4871 27640 24488 905 993 251
.........................................................TGTAAACATCCCCGACTGGAAG.................................................................................................... 22 0 2 3345.50 6691 1858 2168 1784 610 173 98
.........................................................TGTAAACATCCCCGACTGGA...................................................................................................... 20 0 2 1900.50 3801 862 395 247 155 1039 1103
.........................................................TGTAAACATCCCCGACTGGAAGCTT................................................................................................. 25 1 2 1695.50 3391 1906 437 315 578 101 54
.........................................................TGTAAACATCCCCGACTGGAA..................................................................................................... 21 0 2 1673.00 3346 1265 912 527 281 289 72
.........................................................TGTAAACATCCCCGACTGGAAGA................................................................................................... 23 1 2 1160.00 2320 640 719 571 214 115 61
.........................................................TGTAAACATCCCCGACTGGAAA.................................................................................................... 22 1 2 664.50 1329 427 294 199 152 166 91
.........................................................TGTAAACATCCCCGACTGGAAGCA.................................................................................................. 24 1 2 619.50 1239 887 87 62 186 14 3
.........................................................TGTAAACATCCCCGACTGGAAGT................................................................................................... 23 1 2 530.00 1060 131 460 355 17 76 21
..........................................................GTAAACATCCCCGACTGGAAGCT.................................................................................................. 23 0 2 434.50 869 590 101 65 107 5 1
.........................................................TGTAAACATCTCCGACTGGAAGCT.................................................................................................. 24 1 2 336.00 672 572 4 7 88 0 1
..........................................................GTAAACATCCCCGACTGGAAGC................................................................................................... 22 0 2 276.50 553 52 271 210 16 4 0
.........................................................TGTAAACATCCCCGACTGGAAGCTA................................................................................................. 25 1 2 235.50 471 282 43 40 99 4 3
.........................................................TGTAAACATCCCCGACTGGAAGCTTT................................................................................................ 26 1 2 229.00 458 265 68 41 74 6 4
.........................................................TGTAAACATTCCCGACTGGAAGCT.................................................................................................. 24 1 2 209.50 419 338 9 5 67 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTGC............................................................ 22 0 1 112.00 112 0 43 37 1 16 15
.........................................................TGTAAACATCCCCGACTGG....................................................................................................... 19 0 2 104.00 208 102 59 20 10 11 6
.........................................................TGTAAACATCCCCGACTGGAAT.................................................................................................... 22 1 2 99.00 198 64 70 48 7 7 2
.........................................................TGTAAACATCCCCGACTGGAAGCTAT................................................................................................ 26 1 2 97.00 194 134 16 4 36 4 0
.........................................................TGTAAACATCCCCGAC.......................................................................................................... 16 0 2 84.00 168 9 0 0 0 130 29
.........................................................TGTAAACATCCCCGACTGGCAGCT.................................................................................................. 24 1 2 78.50 157 104 3 4 45 0 1
.........................................................TGTAAACATCCCCGACTGGAAGAA.................................................................................................. 24 2 2 78.00 156 52 22 30 50 2 0
.........................................................TGTAAACATCCCCGACTGGACGCT.................................................................................................. 24 1 2 77.50 155 98 1 1 55 0 0
.........................................................TGTAAACATCTCCGACTGGAAGC................................................................................................... 23 1 2 59.00 118 74 16 14 14 0 0
.........................................................TGTAAACATCCCTGACTGGAAGCT.................................................................................................. 24 1 3 56.00 168 115 9 13 26 4 1
.........................................................TGTAAACATCCCCGACTGGAAGCC.................................................................................................. 24 1 2 48.00 96 66 14 5 10 1 0
.........................................................TGTAAACATCCCCGCCTGGAAGCT.................................................................................................. 24 1 2 46.50 93 77 2 0 14 0 0
.........................................................TGTAAACATCCCCGACTGGAAAA................................................................................................... 23 2 2 44.50 89 14 24 9 17 12 13
.........................................................TGTAAACATTCCCGACTGGAAGC................................................................................................... 23 1 2 42.00 84 37 27 12 8 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTTT............................................................................................... 27 2 2 41.50 83 50 7 7 12 6 1
.........................................................TGCAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 36.50 73 46 12 5 8 1 1
.........................................................TGTAAACATCCCCGACTGGAAGCTTA................................................................................................ 26 2 2 35.00 70 46 15 3 5 0 1
.........................................................TGTAAACATCCCCGACTGGAAGTT.................................................................................................. 24 1 2 34.00 68 38 14 6 6 3 1
.........................................................TGTAACCATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 32.00 64 52 1 1 10 0 0
.........................................................TGTAAACATCCCTGACTGGAAGC................................................................................................... 23 1 3 31.00 93 35 31 19 8 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCG.................................................................................................. 24 1 2 31.00 62 40 3 1 5 8 5
..................................................................................................TTTCAGTCAGATGTTTGCTGC............................................................ 21 0 1 29.00 29 0 8 7 0 9 5
.........................................................TATAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 28.50 57 36 7 5 9 0 0
..................................................................................................TTTCAGTCAGATGTTTGCTGCT........................................................... 22 1 1 28.00 28 1 7 5 0 9 6
.........................................................CGTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 27.50 55 32 7 7 7 1 1
..........................................................GTAAACATCCCCGACTGGAAG.................................................................................................... 21 0 2 25.50 51 30 9 10 2 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTGCT........................................................... 23 1 1 25.00 25 0 8 8 0 2 7
.........................................................TGTAAACATCCCCGACTGGGAGCT.................................................................................................. 24 1 2 25.00 50 33 9 5 3 0 0
.........................................................TGTAAACATCCCCGACCGGAAGCT.................................................................................................. 24 1 2 22.50 45 24 7 13 1 0 0
..........................................................GTAAACATCCCCGACTGGAAGCTT................................................................................................. 24 1 2 22.50 45 31 3 2 9 0 0
.........................................................TGTAAATATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 21.50 43 28 7 2 5 1 0
.........................................................TGTAAACATCCCCAACTGGAAGCT.................................................................................................. 24 1 2 20.50 41 22 10 1 6 2 0
.........................................................TGCAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 19.50 39 11 11 15 1 1 0
.........................................................AGTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 19.00 38 22 5 2 8 1 0
.........................................................TGTAAACATCTCCGACTGGAAG.................................................................................................... 22 1 2 19.00 38 20 6 3 9 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTAA................................................................................................ 26 2 2 18.50 37 30 1 0 6 0 0
.........................................................TGTAGACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 18.00 36 21 8 2 4 0 1
.........................................................CGTAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 18.00 36 5 20 9 2 0 0
.........................................................TGTACACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 18.00 36 31 1 2 2 0 0
.........................................................TGTAAGCATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 17.50 35 16 5 5 9 0 0
.........................................................TGTAAACATCCCCGATTGGAAGCT.................................................................................................. 24 1 2 17.00 34 20 3 5 6 0 0
.........................................................TGTGAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 17.00 34 22 4 4 4 0 0
.........................................................TGTAAACATCCCCGATTGGAAGC................................................................................................... 23 1 2 17.00 34 4 17 10 2 1 0
.........................................................TGTAAACATCCCCGACCGGAAGC................................................................................................... 23 1 2 17.00 34 5 15 13 1 0 0
.........................................................TGTAAACACCCCCGACTGGAAGCT.................................................................................................. 24 1 2 16.50 33 16 3 4 8 1 1
.........................................................TGTAAACATCCCCGGCTGGAAGCT.................................................................................................. 24 1 2 16.00 32 24 3 2 3 0 0
.........................................................TGTAAACATCTCCGACTGGAA..................................................................................................... 21 1 2 16.00 32 18 1 1 6 3 3
.........................................................TGTAAACATCCCCAACTGGAAGC................................................................................................... 23 1 2 16.00 32 1 12 19 0 0 0
.........................................................TGTAAACATCCCCGACTGGGAGC................................................................................................... 23 1 2 15.50 31 3 14 13 1 0 0
.........................................................TGTAAACATCCCCGACTGGAGGCT.................................................................................................. 24 1 2 15.00 30 16 2 6 6 0 0
.........................................................TGTAAACATTTCCGACTGGAAGCT.................................................................................................. 24 2 2 14.00 28 21 1 0 6 0 0
.........................................................TGTAAACATCTCCGACTGGAAGCTT................................................................................................. 25 2 2 14.00 28 23 0 0 5 0 0
.........................................................TGTAAATATCCCCGACTGGAAGC................................................................................................... 23 1 2 13.50 27 4 9 11 3 0 0
.........................................................TGTAAACATTCCCGACTGGAAGCTT................................................................................................. 25 2 2 13.50 27 18 0 1 8 0 0
........................................................CTGTAAACATCCCCGACTGGAAGC................................................................................................... 24 1 4 13.50 54 5 31 18 0 0 0
........................................................CTGTAAACATCCCCGACTGGAAGCT.................................................................................................. 25 1 4 12.75 51 17 14 12 7 1 0
.........................................................TGTAAACATCCCCGACTGGAT..................................................................................................... 21 1 2 12.50 25 3 4 4 2 7 5
.........................................................TGTAAACGTCCCCGACTGGAAGCT.................................................................................................. 24 1 2 12.50 25 16 4 3 2 0 0
.........................................................TGTAAACATCCCCGACTTGAAGCT.................................................................................................. 24 1 2 12.50 25 17 2 1 5 0 0
..........................................................GTAAACATCCCCGACTGGAA..................................................................................................... 20 0 2 12.50 25 10 8 4 2 1 0
.........................................................TGTAAACATCCCCGACTGGAATCT.................................................................................................. 24 1 2 12.50 25 18 4 1 2 0 0
.........................................................TGTAAACATCCCCGACTGGCAGC................................................................................................... 23 1 2 12.00 24 10 5 5 4 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTG................................................................................................. 25 0 2 12.00 24 10 5 0 9 0 0
.........................................................TATAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 12.00 24 5 12 7 0 0 0
.........................................................TGTAAACATCCCCGACTGGAGGC................................................................................................... 23 1 2 12.00 24 3 10 10 1 0 0
.........................................................TGTAGACATCCCCGACTGGAAGC................................................................................................... 23 1 2 11.50 23 2 15 6 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGAT.................................................................................................. 24 1 2 11.50 23 8 9 4 2 0 0
.........................................................TGTAAACATCCCCGACTGGAAC.................................................................................................... 22 1 2 11.50 23 5 7 8 1 1 1
.........................................................TGTAAACATCTCCGACTGGA...................................................................................................... 20 1 2 11.00 22 13 0 0 5 0 4
.........................................................TGTAAACATCCCCTACTGGAAGCT.................................................................................................. 24 1 2 11.00 22 14 1 1 6 0 0
.........................................................TGTAAACATCTCCGACTGGAAGCA.................................................................................................. 24 2 2 11.00 22 18 0 0 4 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCAT................................................................................................. 25 2 2 10.50 21 7 3 3 6 1 1
.........................................................TGTAAACATCCCCGACTGGAAGG................................................................................................... 23 1 2 10.50 21 1 12 8 0 0 0
.........................................................TCTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 10.50 21 17 1 1 1 1 0
.........................................................TGTAAACATCACCGACTGGAAGCT.................................................................................................. 24 1 2 10.00 20 12 3 4 1 0 0
.........................................................TGTAAACGTCCCCGACTGGAAGC................................................................................................... 23 1 2 10.00 20 1 11 7 1 0 0
.........................................................TGTAAACCTCCCCGACTGGAAGCT.................................................................................................. 24 1 2 10.00 20 16 1 0 3 0 0
.........................................................TGTCAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 10.00 20 15 1 0 4 0 0
.........................................................TGTAAACATTCCCGACTGGAAG.................................................................................................... 22 1 2 9.50 19 12 1 3 3 0 0
.........................................................TGTATACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 9.50 19 14 2 2 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTC................................................................................................. 25 1 2 9.50 19 4 5 9 1 0 0
.........................................................TGTAAACATCCCCGACTAGAAGC................................................................................................... 23 1 2 9.50 19 2 9 8 0 0 0
.........................................................TGTAAACATCCCCGGCTGGAAGC................................................................................................... 23 1 2 9.50 19 4 12 2 1 0 0
.........................................................TGTAAACATCCCCGACTAGAAGCT.................................................................................................. 24 1 2 9.00 18 11 5 1 1 0 0
..........................................................GTAAACATCCCCGACTGGAAGCA.................................................................................................. 23 1 2 9.00 18 14 0 0 4 0 0
.........................................................GGTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 9.00 18 14 3 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGCAG.................................................................................................... 22 1 2 9.00 18 10 0 1 7 0 0
.........................................................TGTAAACATCCCCGACTGAAAGCT.................................................................................................. 24 1 2 8.50 17 10 4 2 1 0 0
.........................................................TGTAAACATCCCCGACTG........................................................................................................ 18 0 2 8.50 17 4 8 5 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCAA................................................................................................. 25 2 2 8.50 17 13 1 1 2 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTAT............................................................................................... 27 3 2 8.50 17 11 3 0 3 0 0
.........................................................TGTAAACATCGCCGACTGGAAGCT.................................................................................................. 24 1 2 8.50 17 12 2 2 1 0 0
.........................................................TGTAAACATTCCCGACTGGAA..................................................................................................... 21 1 2 8.00 16 14 0 0 2 0 0
.........................................................TGTAAACACCCCCGACTGGAAGC................................................................................................... 23 1 2 8.00 16 2 9 5 0 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTG............................................................. 21 0 1 8.00 8 0 3 2 0 0 3
.........................................................TGAAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 7.50 15 3 2 9 1 0 0
.........................................................TGTGAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 7.50 15 1 8 6 0 0 0
.........................................................TGTAAACATCCCCGACTGGAG..................................................................................................... 21 1 2 7.50 15 5 4 2 2 2 0
.........................................................TGTAAACATCCCCGCCTGGAAGC................................................................................................... 23 1 2 7.50 15 5 7 2 1 0 0
..........................................................GTAAACATCCCCGACTGGAAGA................................................................................................... 22 1 2 7.00 14 6 4 2 1 1 0
.........................................................TGTAAACATCCCCGACTGGAAGGT.................................................................................................. 24 1 2 7.00 14 7 4 0 3 0 0
.........................................................TGTAAACATCCCCGACTGTAAGC................................................................................................... 23 1 2 7.00 14 3 7 4 0 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTGT............................................................ 22 1 1 7.00 7 0 2 4 0 0 1
.........................................................TGTAATCATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 7.00 14 6 2 2 3 0 1
......................................................ATTTGTAAACATCCCCGACTGGAAGC................................................................................................... 26 2 2 7.00 14 0 7 7 0 0 0
.........................................................TGTAAACATCCCCGACTGGAGA.................................................................................................... 22 2 2 7.00 14 10 0 2 0 1 1
.........................................................TGTAAACATCTCCGACTGGAAGA................................................................................................... 23 2 2 7.00 14 8 0 1 3 0 2
.........................................................TGTAAACATCCCTGACTGGAAG.................................................................................................... 22 1 3 7.00 21 13 3 1 4 0 0
.........................................................TGAAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 6.50 13 6 1 4 2 0 0
.........................................................TGTAAACATCTCCGACTGGAAA.................................................................................................... 22 2 2 6.50 13 5 0 1 3 0 4
.........................................................TGTAAACATCCCCGACTCGAAGC................................................................................................... 23 1 2 6.50 13 0 10 3 0 0 0
.........................................................TGTAAACATCCCCGACTGGCAGCTT................................................................................................. 25 2 2 6.50 13 10 0 0 3 0 0
..........................................................GTAAACATCCCCGACTGGAAGCTTT................................................................................................ 25 1 2 6.00 12 8 0 0 4 0 0
.........................................................TGTAAACATCCCCGACTGGAAAC................................................................................................... 23 1 2 6.00 12 1 6 4 1 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCT.............................................................. 20 0 1 6.00 6 0 1 1 1 1 2
.........................................................TGTAAACATCCCAGACTGGAAGC................................................................................................... 23 1 2 6.00 12 1 8 3 0 0 0
........................................................CTGTAAACATCCCCGACTGGAAG.................................................................................................... 23 1 4 6.00 24 12 7 2 3 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTTA............................................................................................... 27 1 2 6.00 12 8 1 0 2 1 0
.........................................................TGTAAACATCCCCGACTCGAAGCT.................................................................................................. 24 1 2 6.00 12 6 1 4 1 0 0
.........................................................TGTAAACATACCCGACTGGAAGC................................................................................................... 23 1 2 6.00 12 1 7 4 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAAT................................................................................................... 23 2 3 6.00 18 3 8 5 0 2 0
.........................................................TGTAAGCATCCCCGACTGGAAGC................................................................................................... 23 1 2 5.50 11 2 5 4 0 0 0
.........................................................TGTAAACATCACCGACTGGAAGC................................................................................................... 23 1 2 5.50 11 1 7 2 1 0 0
.........................................................TGTAAACATCCCCGACTGGAATC................................................................................................... 23 1 2 5.00 10 3 3 4 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGAAA................................................................................................. 25 3 3 5.00 15 4 2 1 8 0 0
.........................................................TGTAAACATCCCCGACAGGAAGCT.................................................................................................. 24 1 2 5.00 10 6 2 2 0 0 0
.........................................................TTTAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 5.00 10 5 2 2 1 0 0
.........................................................TGTAAACATACCCGACTGGAAGCT.................................................................................................. 24 1 2 5.00 10 9 0 0 1 0 0
...........................................................TAAACATCCCCGACTGGAAGCT.................................................................................................. 22 0 2 5.00 10 7 0 1 1 1 0
.........................................................TGTAAACATCCCCGACTGGAAGTA.................................................................................................. 24 2 2 5.00 10 6 1 0 3 0 0
.........................................................TGTAAACTTCCCCGACTGGAAGCT.................................................................................................. 24 1 2 5.00 10 4 2 1 3 0 0
.........................................................TCTAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 5.00 10 1 4 4 0 1 0
.........................................................TGTAAACATCGCCGACTGGAAGC................................................................................................... 23 1 2 5.00 10 2 5 3 0 0 0
.........................................................TGTAAACATCCCTGACTGGAAGCTT................................................................................................. 25 2 3 4.67 14 8 0 0 6 0 0
.........................................................TGTTAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 4.50 9 7 1 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGAC..................................................................................................... 21 1 2 4.50 9 3 3 0 3 0 0
.........................................................TGTAAACATCCCCGTCTGGAAGCT.................................................................................................. 24 1 2 4.50 9 5 1 1 2 0 0
.........................................................TGTAAACATCCCCGACTGAAAGC................................................................................................... 23 1 2 4.50 9 2 4 3 0 0 0
.........................................................TGTAAACATCCCCGACT......................................................................................................... 17 0 2 4.50 9 5 3 0 1 0 0
.........................................................TGTATACATCCCCGACTGGAAGC................................................................................................... 23 1 2 4.50 9 1 4 4 0 0 0
........................................................CTGTAAACATCCCCGACTGGA...................................................................................................... 21 1 4 4.25 17 9 2 3 2 1 0
.........................................................TGTAAACATCCCCGACTGGACGCTT................................................................................................. 25 2 2 4.00 8 5 0 0 3 0 0
.........................................................TGTAAACATCCCCGACTGCAAGC................................................................................................... 23 1 2 4.00 8 1 1 6 0 0 0
.........................................................TGTAAACAACCCCGACTGGAAGCT.................................................................................................. 24 1 2 4.00 8 4 2 0 1 0 1
.........................................................TGTAAACATCCCCGACTGGACGC................................................................................................... 23 1 2 4.00 8 4 0 1 3 0 0
.........................................................TGTAAACATCCACGACTGGAAGCT.................................................................................................. 24 1 4 4.00 16 8 4 2 2 0 0
..........................................................GTAAACATCCCCGACTGGAAGT................................................................................................... 22 1 2 4.00 8 0 6 2 0 0 0
.........................................................TGTAAACATCCCCTACTGGAAGC................................................................................................... 23 1 2 4.00 8 3 2 1 2 0 0
.........................................................TGTACACATCCCCGACTGGAAGC................................................................................................... 23 1 2 4.00 8 2 2 1 2 1 0
.........................................................TGTAAACATCCCCGACTGGTAGCT.................................................................................................. 24 1 2 4.00 8 5 1 0 2 0 0
.........................................................TGTAAACATCCCCGACGGGAAGCT.................................................................................................. 24 1 2 4.00 8 4 0 2 2 0 0
.........................................................TGTAACCATCCCCGACTGGAAGC................................................................................................... 23 1 2 4.00 8 2 4 2 0 0 0
.........................................................AGTAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 4.00 8 0 2 6 0 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTGCA........................................................... 23 1 1 4.00 4 1 1 2 0 0 0
.........................................................TGTAAACATTTCCGACTGGAAGC................................................................................................... 23 2 2 4.00 8 7 0 0 1 0 0
.........................................................TGTAAACATCCACGACTGGAAGC................................................................................................... 23 1 4 3.75 15 4 6 2 3 0 0
.........................................................TGTAAACAACCCCGACTGGAAGC................................................................................................... 23 1 2 3.50 7 2 3 2 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAACT.................................................................................................. 24 1 2 3.50 7 4 1 1 1 0 0
.........................................................TGTAAACATCCCCGACTTGAAGC................................................................................................... 23 1 2 3.50 7 1 5 1 0 0 0
..........................................................GTAAACATCCCCGACTGGA...................................................................................................... 19 0 2 3.50 7 6 0 0 0 1 0
.........................................................TGTAAACATCCCCGACTGGACGCA.................................................................................................. 24 2 2 3.50 7 6 0 0 1 0 0
.........................................................TGTAAACATCTCCGACTGGAAGCTA................................................................................................. 25 2 2 3.50 7 4 0 0 3 0 0
.........................................................TGTAAATATCCCCGACTGGAAG.................................................................................................... 22 1 2 3.50 7 6 0 1 0 0 0
.........................................................TGTAAACATCCCCGCCTGGAAGCTT................................................................................................. 25 2 2 3.50 7 4 0 0 3 0 0
.........................................................TGTAAACATCTCCGACTGGAAGCTTT................................................................................................ 26 2 2 3.50 7 7 0 0 0 0 0
.........................................................TGTAAACATCCCAGACTGGAAGCT.................................................................................................. 24 1 2 3.00 6 4 1 1 0 0 0
.........................................................CGTAAACATCCCCGACTGGAAG.................................................................................................... 22 1 2 3.00 6 5 1 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGCAGA................................................................................................... 23 2 2 3.00 6 2 0 0 3 1 0
.........................................................TGTAAACATCCCCGACTGGAACCT.................................................................................................. 24 1 2 3.00 6 5 0 0 0 1 0
..........................................................GTAAACATCCCCGACTGGAAGCTAT................................................................................................ 25 1 2 3.00 6 1 0 0 5 0 0
.........................................................TGTAAACCTCCCCGACTGGAAGC................................................................................................... 23 1 2 3.00 6 1 5 0 0 0 0
.........................................................TGGAAACATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 3.00 6 4 1 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTGA................................................................................................ 26 1 2 3.00 6 3 2 1 0 0 0
..........................................................TTAAACATCCCCGACTGGAAGCT.................................................................................................. 23 1 2 3.00 6 1 2 3 0 0 0
.........................................................TGTAAACATCCCCGACTGGAACC................................................................................................... 23 1 2 3.00 6 0 4 2 0 0 0
.........................................................TGTAAACATCCCCGACTGT....................................................................................................... 19 1 2 3.00 6 0 4 0 0 2 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTTTT.............................................................................................. 28 3 2 3.00 6 1 1 1 1 2 0
.........................................................TGTAAACATCCCTGACTGGAAGA................................................................................................... 23 2 3 2.67 8 4 1 0 3 0 0
.........................................................TGTAAACATCCCCGACTGGT...................................................................................................... 20 1 2 2.50 5 2 1 0 1 1 0
..........................................................GTAAACATCCCCGACTGGCAGCT.................................................................................................. 23 1 2 2.50 5 5 0 0 0 0 0
.........................................................TGTAAACATTCCCGACTGGAAGA................................................................................................... 23 2 2 2.50 5 4 0 1 0 0 0
.........................................................TGTAAACATTCCCGACTGGA...................................................................................................... 20 1 2 2.50 5 3 1 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCCT................................................................................................. 25 2 2 2.50 5 2 1 0 0 2 0
.........................................................TGTAAACATCCCCGAATGGAAGCT.................................................................................................. 24 1 2 2.50 5 4 0 0 1 0 0
.........................................................TATAAACATCCCCGACTGGAAGCTT................................................................................................. 25 2 2 2.50 5 4 0 0 1 0 0
.........................................................GGTAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 2.50 5 0 4 1 0 0 0
.........................................................TGTAAACATCCCCGACTGTAAGCT.................................................................................................. 24 1 2 2.50 5 1 2 1 1 0 0
.........................................................TGTAAACATCCCCGACTGGTAGC................................................................................................... 23 1 2 2.50 5 0 1 4 0 0 0
.........................................................TGTAAACATCCCCGACTGGACGA................................................................................................... 23 2 2 2.50 5 3 0 0 2 0 0
.........................................................TGTACACATCCCCGACTGGA...................................................................................................... 20 1 2 2.50 5 2 0 0 2 0 1
.........................................................TGTAAACATCCCCGACTGGAAGCTTC................................................................................................ 26 2 2 2.50 5 4 1 0 0 0 0
.........................................................TGTCAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 2.50 5 4 1 0 0 0 0
.........................................................TGTAAACTTCCCCGACTGGAAGC................................................................................................... 23 1 2 2.50 5 0 2 3 0 0 0
.........................................................TGTAAACATCCCCGAGTGGAAGC................................................................................................... 23 1 2 2.50 5 0 3 1 1 0 0
.........................................................TGTAAACATCCCCGACTGGCAGCA.................................................................................................. 24 2 2 2.50 5 5 0 0 0 0 0
.........................................................TGTAATCATCCCCGACTGGAAGC................................................................................................... 23 1 2 2.50 5 1 1 3 0 0 0
...............................................................CATCCCCGACTGGAAGC................................................................................................... 17 0 2 2.50 5 0 4 1 0 0 0
..........................................................GTAAACATCCCCGCCTGGAAGCT.................................................................................................. 23 1 2 2.50 5 5 0 0 0 0 0
.........................................................TGTAAACATTCCCGACTGGAAGCA.................................................................................................. 24 2 2 2.50 5 3 0 0 2 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTCT................................................................................................ 26 1 2 2.50 5 1 1 3 0 0 0
.........................................................TGTACACATCCCCGACTGGAA..................................................................................................... 21 1 2 2.50 5 3 0 0 2 0 0
.........................................................TGTAAACATCCCCGCCTGGACGCT.................................................................................................. 24 2 2 2.50 5 4 0 0 1 0 0
.........................................................TGTAAATATCCCCGACTGGAAGA................................................................................................... 23 2 2 2.50 5 4 1 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGTAG.................................................................................................... 22 1 2 2.50 5 3 1 0 1 0 0
.........................................................TGCAAACATCCCCGACTGGAAG.................................................................................................... 22 1 2 2.50 5 1 0 2 2 0 0
.........................................................TGGAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 2.50 5 2 2 0 1 0 0
..........................................................TGTAACATCCCCGACTGGAAGCT.................................................................................................. 23 3 4 2.25 9 5 3 0 1 0 0
......................................................ATTTGTAAACATCCTCGACTGGAAGCT.................................................................................................. 27 3 4 2.25 9 0 6 3 0 0 0
.........................................................CGTAAACATCCCCGACTGGAAGCTT................................................................................................. 25 2 2 2.00 4 2 0 0 2 0 0
...........................................................TAAACATCCCCGACTGGAAGC................................................................................................... 21 0 2 2.00 4 2 2 0 0 0 0
.........................................................TGTAAACATCACCGACTGGAAG.................................................................................................... 22 1 2 2.00 4 1 1 1 1 0 0
......................................................TTATGTAAACATCCCCGACTGGAAGC................................................................................................... 26 2 2 2.00 4 0 3 1 0 0 0
.........................................................TGTAAACATCTCTGACTGGAAGCT.................................................................................................. 24 2 3 2.00 6 5 0 0 1 0 0
.........................................................TGTAAAAATCCCCGACTGGAAGCT.................................................................................................. 24 1 2 2.00 4 4 0 0 0 0 0
.........................................................TGTAAACATCCCCCACTGGAAGC................................................................................................... 23 1 2 2.00 4 0 3 1 0 0 0
........................................................ATGTAAACATCCCCGACTGGAAGC................................................................................................... 24 1 2 2.00 4 0 2 2 0 0 0
.........................................................TGTAAACATCCCCGACTGGAGG.................................................................................................... 22 1 2 2.00 4 2 1 0 1 0 0
..................................................................................................TTTCAGTCAGATGTTTGCT.............................................................. 19 0 1 2.00 2 1 1 0 0 0 0
.................................................................................................CTTTCAGTCAGATGTTTGCTGTT........................................................... 23 2 1 2.00 2 0 1 1 0 0 0
.........................................................TGTAAACATGCCCGACTGGAAGCT.................................................................................................. 24 1 2 2.00 4 1 2 0 0 1 0
.........................................................TGTAAACATTCCCGACTGGAAGCTTT................................................................................................ 26 2 2 2.00 4 4 0 0 0 0 0
.........................................................TGTAAACATCCCCGAATGGAAGC................................................................................................... 23 1 2 2.00 4 0 2 2 0 0 0
..........................................................GTAAACATTCCCGACTGGAAGCT.................................................................................................. 23 1 2 2.00 4 4 0 0 0 0 0
.........................................................TGTAAACATCCCCGACTGCAAGCT.................................................................................................. 24 1 2 2.00 4 1 0 1 1 1 0
.........................................................TGTAAACATTCCCGACTGGAAGT................................................................................................... 23 2 2 2.00 4 2 0 0 1 0 1
.........................................................TGTAAACATCCCCGACTGGAAGCTGTA............................................................................................... 27 0 2 2.00 4 1 0 0 3 0 0
..........................................................GTAAACATCCCCGACTGGAAGCTA................................................................................................. 24 1 2 2.00 4 4 0 0 0 0 0
........................................................TTGTAAACATCCCCGACTGGAAGCT.................................................................................................. 25 0 2 2.00 4 3 0 1 0 0 0
..........................................................GTAAACATCCCCGACTGGAAA.................................................................................................... 21 1 2 2.00 4 2 1 0 1 0 0
........................................................CTGTAAACATCCCCGACTGGAA..................................................................................................... 22 1 4 2.00 8 2 2 0 3 1 0
.........................................................TGTAAACATCCCCAACTGGAAG.................................................................................................... 22 1 2 2.00 4 2 0 1 1 0 0
.........................................................TGTAAACATCCCCGACTGGG...................................................................................................... 20 1 2 2.00 4 0 0 0 0 2 2
.........................................................TGTAAACATCCCCGACTCGAAG.................................................................................................... 22 1 2 2.00 4 1 0 3 0 0 0
.........................................................TGTAAACATTCCCGACTGGAAGCTA................................................................................................. 25 2 2 2.00 4 2 0 0 2 0 0
................................................................ATCCCCGACTGGAAGC................................................................................................... 16 0 2 2.00 4 0 3 1 0 0 0
.........................................................TGTAAACATCTCCGACTGGAAGT................................................................................................... 23 2 3 2.00 6 5 0 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTGTAAGA............................................................................................ 30 0 2 2.00 4 0 0 0 4 0 0
......................................................TTATGTAAACATCCCCGACTGGAAGCT.................................................................................................. 27 2 2 2.00 4 0 2 2 0 0 0
.........................................................TGTAAACATCCCCGCCTGGAA..................................................................................................... 21 1 2 2.00 4 3 0 0 1 0 0
.........................................................CGTAAACATCCCCGACTGGAA..................................................................................................... 21 1 2 2.00 4 1 0 2 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTAAA............................................................................................... 27 2 2 2.00 4 1 0 1 1 1 0
.........................................................TGTAAACATCCCCGATTGGAAGCTT................................................................................................. 25 2 2 2.00 4 3 0 1 0 0 0
.........................................................TGTAAACATCCCTGACTGGA...................................................................................................... 20 1 4 2.00 8 1 0 0 0 2 5
......................................................ATTTGTAAACATCCCCGACTGGAAGCT.................................................................................................. 27 2 2 2.00 4 0 3 1 0 0 0
.........................................................TGTAAACATCCCTGACTGGAA..................................................................................................... 21 1 4 1.75 7 5 2 0 0 0 0
.........................................................TGTAAACATCCCTGACTGGAAGCA.................................................................................................. 24 2 3 1.67 5 5 0 0 0 0 0
.........................................................CGTAAACATCCCCGACTGGAAGCA.................................................................................................. 24 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACACCCCCGACTGGAAG.................................................................................................... 22 1 2 1.50 3 0 1 1 1 0 0
.........................................................TGTAAACATCCCCGACTGGCAA.................................................................................................... 22 2 2 1.50 3 2 0 0 1 0 0
.........................................................CGTAAACATCCCCGACTGGAAGA................................................................................................... 23 2 2 1.50 3 1 0 1 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCCA................................................................................................. 25 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACATCCCCGCCTGGAAGT................................................................................................... 23 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAATATCCCCGACTGGAAGT................................................................................................... 23 2 2 1.50 3 1 2 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGAC.................................................................................................. 24 2 2 1.50 3 0 2 0 1 0 0
.........................................................TGTAAATATCCCCGACTGGAAGCTT................................................................................................. 25 2 2 1.50 3 2 1 0 0 0 0
..........................................................GTAAACATCCCCGACTGGAAGCC.................................................................................................. 23 1 2 1.50 3 2 1 0 0 0 0
.........................................................TGTAAACATCTCCGACTGGAAGCTAT................................................................................................ 26 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTGT............................................................................................... 27 3 2 1.50 3 0 2 1 0 0 0
......................................TGTCTAGAAAGTCTGTTGT.......................................................................................................................... 19 0 2 1.50 3 0 1 1 1 0 0
.........................................................TGTAACCATCCCCGACTGGA...................................................................................................... 20 1 2 1.50 3 1 0 0 1 1 0
.........................................................TGTAAACATCCCCGACTGGGAGCTT................................................................................................. 25 2 2 1.50 3 2 1 0 0 0 0
.........................................................TGTAAGCATCCCCGACTGGAAG.................................................................................................... 22 1 2 1.50 3 1 0 2 0 0 0
.........................................................TGTAAACATCCCCGACTGGAATCTAT................................................................................................ 26 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGACA.................................................................................................... 22 2 2 1.50 3 2 0 0 1 0 0
.........................................................CGTAAACATCCCCGACTGGA...................................................................................................... 20 1 2 1.50 3 1 0 0 0 2 0
..........................................................GTAAACATCCCCGACTGGAAT.................................................................................................... 21 1 2 1.50 3 0 2 1 0 0 0
.........................................................TGTAAACATCCCCGACTGGATGC................................................................................................... 23 1 2 1.50 3 0 3 0 0 0 0
.........................................................TGTAAACATCCCCGACAGGAAGC................................................................................................... 23 1 2 1.50 3 0 3 0 0 0 0
.........................................................TGTAAACATCCCCGCCTGGCAGCT.................................................................................................. 24 2 2 1.50 3 2 0 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGCA..................................................................................................... 21 1 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACATCCCCGATTGGAA..................................................................................................... 21 1 2 1.50 3 1 0 1 1 0 0
.........................................................TGCAAACATCCCCGACTGGAA..................................................................................................... 21 1 2 1.50 3 1 1 0 0 1 0
..........................................................GTAAACATCCCCGACTGGACGCT.................................................................................................. 23 1 2 1.50 3 2 0 0 1 0 0
.........................................................TGTTAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 1.50 3 1 0 2 0 0 0
.........................................................TGTAAAAATCCCCGACTGGAAGC................................................................................................... 23 1 2 1.50 3 2 1 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGACGCTTT................................................................................................ 26 2 2 1.50 3 3 0 0 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTTAA............................................................................................... 27 2 2 1.50 3 0 0 0 3 0 0
.........................................................TGTAAACATCCCCGGCTGGAA..................................................................................................... 21 1 2 1.50 3 2 0 1 0 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTGTAG.............................................................................................. 28 1 2 1.50 3 0 1 0 2 0 0
.........................................................TGTAAACATCCCCGATTGGAAG.................................................................................................... 22 1 2 1.50 3 2 0 0 1 0 0
.........................................................TGTAAACATCCCCGACTGGAAGCTGT................................................................................................ 26 0 2 1.50 3 2 0 0 1 0 0
..........................................................TTAAACATCCCCGACTGGAAGC................................................................................................... 22 1 2 1.50 3 0 1 2 0 0 0
................................................................ATCCCCGACTGGAAGCT.................................................................................................. 17 0 2 1.50 3 2 1 0 0 0 0
.........................................................TTTAAACATCCCCGACTGGAAGC................................................................................................... 23 1 2 1.50 3 0 1 2 0 0 0
.........................................................TGTAAACATCCCCGACTGGAGGCTT................................................................................................. 25 2 2 1.50 3 1 0 0 2 0 0

Anti-sense strand reads

ACTGACCGTCGTAAACAGTAAAGGAGGACAATTAAACAACAGATCTTTCAGACAACAACATTTGTAGGGGCTGACCTTCGACATTCTGTATCGATTCGAAAGTCAGTCTACAAACGACGGTGGCTGAGAAGTGTCCGTAGTAAAGCCATATTAATATAGATTCTTCACCTTAACCCCCC

*********************************************..(((((((.((.((.(((((((((...(((((((((((..............))))))))))).))))))))).)).)).)))).)))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:36 AM