ID:

ssc-mir-30a

 Coordinate:

chr1:57750736-57750842 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.7 -52.7 -52.1
mature

  1. ssc-mir-30a  chr1:57750799-57750822 -
  2. GL895276-2:200566-200589 +
star

  1. ssc-mir-30a  chr1:57750760-57750781 -
  2. GL895276-2:200607-200628 +

Sense Strand Reads

CCTGTCCATCTCAGGGACCCTTCTCCAGGGTAACCAGACAGCAACAAGTGTCCCTGCGACAGTGAGCGGCTGTAAACATCCTCGACTGGAAGCTGTGAGGCTGAAGACGGGCTTTCAGTCGGATGTTTGCAGCCGCCGACTGCCTCCCGCATCAGGAGCTGCCGTAGGAGCAGTGGTCTCCTTAGCCCCGCTGGACACCTCACCCTC

*******************************************************....((((..((((((((((((((((..(((((((((((((..........)).)))))))))))))))))))))))))))..))))......*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR1274764

testes		 SRR1274763

ovary		 SRR139076

testes		 SRR066810

testes
......................................................................TGTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 0 2 21105.50 42211 20899 6788 3074 4721 4245 2484
......................................................................TGTAAACATCCTCGACTGGAAGC.................................................................................................................. 23 0 2 8365.50 16731 9175 3348 593 1019 1408 1188
......................................................................TGTAAACATCCTCGACTGGA..................................................................................................................... 20 0 2 5827.00 11654 768 324 6902 3232 167 261
......................................................................TGTAAACATCCTCGACTGGAAG................................................................................................................... 22 0 2 4475.00 8950 5269 1252 247 284 1311 587
......................................................................TGTAAACATCCTCGACTGGAA.................................................................................................................... 21 0 2 1556.00 3112 1015 567 410 475 241 404
......................................................................TGTAAACATCCTCGACTGGAAGA.................................................................................................................. 23 1 2 1549.00 3098 1669 171 339 273 518 128
......................................................................TGTAAACATCCTCGACTGGAAGCA................................................................................................................. 24 1 2 780.50 1561 1250 60 12 21 193 25
......................................................................TGTAAACATCCTCGACTGGAAA................................................................................................................... 22 1 2 471.00 942 306 218 104 57 108 149
......................................................................TGTAAACATCCTCGACTGGAAGT.................................................................................................................. 23 1 2 377.00 754 153 214 108 97 35 147
......................................................................TGTAAACATCCTCGACTGGAAGCTT................................................................................................................ 25 1 2 353.00 706 367 65 45 96 103 30
...............................................................................................................CTTTCAGTCGGATGTTTGCAGC.......................................................................... 22 0 2 317.00 634 191 148 108 100 25 62
......................................................................TGTAAACATCCTCGACTGG...................................................................................................................... 19 0 2 208.50 417 183 99 27 18 25 65
......................................................................TGTAAACATTCTCGACTGGAAGCT................................................................................................................. 24 1 2 156.00 312 240 5 0 0 64 3
.......................................................................GTAAACATCCTCGACTGGAAGCT................................................................................................................. 23 0 2 152.50 305 62 87 37 69 10 40
...............................................................................................................CTTTCAGTCGGATGTTTGCAG........................................................................... 21 0 2 146.00 292 101 39 37 68 15 32
...............................................................................................................CTTTCAGTCGGATGTTTGCAGCA......................................................................... 23 1 2 129.00 258 39 126 10 11 2 70
......................................................................TGTAAACATCTTCGACTGGAAGCT................................................................................................................. 24 1 2 92.00 184 148 3 0 2 30 1
......................................................................TGTAAACATCCTCGACTGGAAGCC................................................................................................................. 24 1 2 92.00 184 129 9 7 5 26 8
......................................................................TGTAAACATCCTCGACTGGAAGCTA................................................................................................................ 25 1 2 72.50 145 88 23 0 4 25 5
...............................................................................................................CTTTCAGTCGGATGTTTGCAGT.......................................................................... 22 1 2 66.50 133 15 68 7 9 5 29
................................................................................................................TTTCAGTCGGATGTTTGCAGC.......................................................................... 21 0 2 62.50 125 38 36 13 23 2 13
.......................................................................GTAAACATCCTCGACTGGAAGC.................................................................................................................. 22 0 2 59.50 119 61 36 3 4 6 9
......................................................................TGTAAACATCCTCGACTGGAAGCG................................................................................................................. 24 1 2 51.00 102 83 3 2 8 5 1
.......................................................................GTAAACATCCTCGACTGGAAG................................................................................................................... 21 0 2 51.00 102 70 11 1 2 15 3
......................................................................TGTAAACATCCTCGAC......................................................................................................................... 16 0 2 47.00 94 15 1 22 52 4 0
......................................................................TGTAAACATCCTCGACTGGCAGCT................................................................................................................. 24 1 2 40.50 81 59 2 0 1 19 0
......................................................................TGTAAACATCATCGACTGGAAGCT................................................................................................................. 24 1 2 35.50 71 44 10 0 0 6 11
......................................................................TGTAAACATCCTCGACTGGACGCT................................................................................................................. 24 1 2 34.50 69 47 1 1 0 20 0
...............................................................................................................CTTTCAGTCGGATGTTTGCA............................................................................ 20 0 2 33.50 67 19 27 1 2 3 15
................................................................................................................TTTCAGTCGGATGTTTGCAGT.......................................................................... 21 1 2 32.50 65 4 50 0 2 0 9
......................................................................TGTAAACATCCTCGACTGGAAT................................................................................................................... 22 1 2 32.50 65 37 9 1 4 7 7
......................................................................TGTAAACATCCTCGACTGGAAGAA................................................................................................................. 24 2 2 29.50 59 43 2 2 2 9 1
......................................................................TGTAAACATTCTCGACTGGAAGC.................................................................................................................. 23 1 2 29.00 58 43 3 1 1 5 5
......................................................................TGTAAACATCCTCGACTGGAAGCTTT............................................................................................................... 26 1 2 28.00 56 29 13 1 2 6 5
........................................................................TAAACATCCTCGACTGGAAGCT................................................................................................................. 22 0 2 28.00 56 21 11 13 5 2 4
......................................................................TGTAAACATCTTCGACTGGAAGC.................................................................................................................. 23 1 2 27.00 54 40 6 1 4 1 2
.....................................................................CTGTAAACATCCTCGACTGGAAGCT................................................................................................................. 25 0 2 23.50 47 15 14 1 3 12 2
......................................................................TGTAAACATTCTCGACTGGAA.................................................................................................................... 21 1 2 23.50 47 10 1 20 13 2 1
................................................................................................................TTTCAGTCGGATGTTTGCAGCT......................................................................... 22 1 2 22.00 44 1 24 2 10 0 7
......................................................................TGTAAACATCCTCGACTGGAAGCTAT............................................................................................................... 26 1 2 21.50 43 26 3 0 1 12 1
......................................................................TGTAAACATCCTCGCCTGGAAGCT................................................................................................................. 24 1 2 21.00 42 35 3 0 1 3 0
................................................................................................................TTTCAGTCGGATGTTTGCAGCA......................................................................... 22 1 2 21.00 42 10 25 1 1 0 5
.......................................................................GTAAACATCCTCGACTGGA..................................................................................................................... 19 0 2 19.00 38 3 2 21 9 2 1
......................................................................TGTAAACATTCTCGACTGGAAG................................................................................................................... 22 1 2 18.50 37 27 2 5 1 2 0
......................................................................TGTACACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 18.50 37 27 0 0 0 9 1
......................................................................TGTAACCATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 17.50 35 30 0 0 1 4 0
......................................................................TGTAAACATCCTCGACTGGCAG................................................................................................................... 22 1 2 17.50 35 21 0 0 1 13 0
......................................................................TGTAACCATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 17.50 35 28 1 1 0 5 0
......................................................................TGCAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 17.00 34 25 3 1 2 3 0
......................................................................TGTAAACATCCTCGACTGGAAGCCT................................................................................................................ 25 2 2 17.00 34 9 0 21 2 1 1
................................................................................................................TTTCAGTCGGATGTTTGCAG........................................................................... 20 0 2 16.50 33 13 11 0 3 0 6
......................................................................TGTAAACATCCTCGACTGGAAGTT................................................................................................................. 24 1 2 16.00 32 20 7 0 0 1 4
......................................................................TGTAAACATCCTCGACTGGACGC.................................................................................................................. 23 1 2 16.00 32 27 1 0 0 4 0
......................................................................TGTAAACATCCTCGACTGGAAAA.................................................................................................................. 23 2 3 15.67 47 17 8 8 0 7 7
................................................................................................................TTTCAGTCGGATGTTTGCAGCAT........................................................................ 23 2 2 15.50 31 6 22 0 0 0 3
.....................................................................CTGTAAACATCCTCGACTGGAAGC.................................................................................................................. 24 0 2 15.50 31 19 5 1 0 5 1
......................................................................TGTAAACATCCTCGACTGGGAGCT................................................................................................................. 24 1 2 15.50 31 18 5 1 1 6 0
......................................................................CGTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 14.50 29 16 2 1 0 5 5
......................................................................TGTAAACATCCTCGACTGGG..................................................................................................................... 20 1 2 14.00 28 0 0 20 8 0 0
.....................................................................CTGTAAACATCCCCGACTGGAAGC.................................................................................................................. 24 1 4 13.50 54 5 31 0 0 0 18
......................................................................TGTAAACATCTTCGACTGGAAG................................................................................................................... 22 1 2 13.50 27 16 0 0 4 7 0
......................................................................TGTAAACATCCTCGACTGA...................................................................................................................... 19 1 2 13.00 26 2 0 15 9 0 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAGA.......................................................................... 22 1 2 13.00 26 0 8 2 4 2 10
......................................................................TGTAAACATCCTCGACTGGT..................................................................................................................... 20 1 2 13.00 26 12 1 8 4 1 0
.....................................................................CTGTAAACATCCCCGACTGGAAGCT................................................................................................................. 25 1 4 12.75 51 17 14 0 1 7 12
...............................................................................................................CTTTCAGTCGGATGTTTGCAGCAT........................................................................ 24 2 2 12.50 25 12 7 0 0 1 5
......................................................................TGTAAACATCCTCGACTGGAT.................................................................................................................... 21 1 2 12.50 25 1 7 7 6 0 4
.....................................................................CTGTAAACATCCTCGACTGGAAG................................................................................................................... 23 0 2 11.50 23 16 1 0 0 5 1
..............................................................................................GTGAGGCTGAAGACGGG................................................................................................ 17 0 2 11.50 23 22 0 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGAAGCAA................................................................................................................ 25 2 2 11.00 22 17 3 0 0 2 0
......................................................................TATAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 11.00 22 15 2 0 1 4 0
......................................................................TGTAAATATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 11.00 22 15 5 0 0 2 0
......................................................................TGTAAACATCCTCGACTGGCAGC.................................................................................................................. 23 1 2 11.00 22 13 0 0 0 9 0
......................................................................TGTAAACATCCTCGACCGGAAGCT................................................................................................................. 24 1 2 10.50 21 11 4 1 1 3 1
......................................................................TGTAAACATCCTCGGCTGGAAGCT................................................................................................................. 24 1 2 10.50 21 14 4 0 0 2 1
......................................................................TGTAAACATCATCGACTGGAAGC.................................................................................................................. 23 1 2 10.50 21 5 9 0 0 1 6
......................................................................TGTGAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 10.00 20 14 1 1 0 3 1
......................................................................TGTAAACATCCTCGACTGGAGGCT................................................................................................................. 24 1 2 10.00 20 10 5 1 0 1 3
......................................................................TGTAAACATCCTCGACTGGAAGCTTA............................................................................................................... 26 2 2 9.50 19 3 8 2 2 2 2
......................................................................TGTAAACATCCTCGACTG....................................................................................................................... 18 0 2 9.50 19 11 4 1 2 1 0
......................................................................AGTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 9.00 18 12 2 0 0 4 0
......................................................................TGTAAACATTCTCGACTGGAAGCTT................................................................................................................ 25 2 2 9.00 18 18 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTTGAAGCT................................................................................................................. 24 1 2 8.50 17 12 0 0 0 5 0
......................................................................TGTAAACATTTTCGACTGGAAGCT................................................................................................................. 24 2 2 8.50 17 14 0 0 0 3 0
......................................................................TGTCAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 8.50 17 15 0 0 1 1 0
......................................................................TGTAAACATCCTCGACTGGAAGCAT................................................................................................................ 25 2 2 8.50 17 13 1 0 0 3 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAGCT......................................................................... 23 1 2 8.50 17 1 7 3 3 1 2
......................................................................TGTAAACATCCTCGACTGGAAGCCA................................................................................................................ 25 2 2 8.50 17 8 0 1 1 6 1
......................................................................TGTAAACATCCTCAACTGGAAGCT................................................................................................................. 24 1 2 8.00 16 11 2 0 0 2 1
......................................................................TGTAAATATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 8.00 16 9 4 0 0 2 1
.....................................................................CTGTAAACATCCTCGACTGGA..................................................................................................................... 21 0 2 8.00 16 7 2 4 1 1 1
......................................................................GGTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 8.00 16 13 0 1 1 0 1
......................................................................TGTAAACATTCTCGACTGGAAGA.................................................................................................................. 23 2 2 8.00 16 13 0 0 0 3 0
......................................................................TGTAAACATCCTCGACTGGGAAC.................................................................................................................. 23 2 2 8.00 16 10 0 0 0 6 0
...............................................................................................................CTTTCAGTCGGATGTTTGC............................................................................. 19 0 2 8.00 16 4 4 1 1 3 3
......................................................................TGTAGACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 7.50 15 9 1 1 0 2 2
......................................................................TGTAAACCTCCTCGACTGGAAGCT................................................................................................................. 24 1 2 7.50 15 14 1 0 0 0 0
......................................................................TGTAAACATCCTCGACTAGAAGCT................................................................................................................. 24 1 2 7.50 15 7 5 0 1 0 2
......................................................................TGTAAACATCCTCGATTGGAAGC.................................................................................................................. 23 1 2 7.00 14 11 2 0 1 0 0
......................................................................TGTCAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 7.00 14 13 0 0 0 1 0
......................................................................TGCAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 7.00 14 10 3 0 0 0 1
......................................................................TGTAAACATCCTCGATTGGAAGCT................................................................................................................. 24 1 2 6.50 13 6 3 0 1 2 1
.......................................................................GTAAACATCCTCGACTGGAA.................................................................................................................... 20 0 2 6.50 13 4 2 0 3 0 4
......................................................................TGTAATCATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 6.50 13 11 0 1 0 1 0
......................................................................TGTAAACATCTTCGACTGGAA.................................................................................................................... 21 1 2 6.50 13 12 0 0 0 0 1
......................................................................TGTAAACGTCCTCGACTGGAAGCT................................................................................................................. 24 1 2 6.50 13 10 0 1 1 0 1
...............................................................................................................CTTTCAGTCGGATGTTTGCAA........................................................................... 21 1 2 6.50 13 6 2 1 0 1 3
......................................................................TGTAAACATCCTCGCCTGGAAGC.................................................................................................................. 23 1 2 6.50 13 10 0 0 1 2 0
.....................................................................CTGTAAACATCCCCGACTGGAAG................................................................................................................... 23 1 4 6.00 24 12 7 0 0 3 2
......................................................................TGTAAACATCCTCGACCGGAAGC.................................................................................................................. 23 1 2 6.00 12 7 0 1 0 3 1
......................................................................TGTAAACACCCTCGACTGGAAGCT................................................................................................................. 24 1 2 6.00 12 6 2 0 1 3 0
......................................................................TGTAAACATTCTCGACTGGA..................................................................................................................... 20 1 2 6.00 12 1 2 2 5 1 1
......................................................................TGTAAACACCCTCGACTGGAAGC.................................................................................................................. 23 1 2 6.00 12 8 1 0 0 3 0
......................................................................TGTAAGCATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 6.00 12 5 3 0 1 3 0
......................................................................TGTAAACATCCTCGACTGGAAGG.................................................................................................................. 23 1 2 6.00 12 5 5 1 0 0 1
......................................................................TGTAAACATCCTCGACTGT...................................................................................................................... 19 1 2 6.00 12 1 3 2 3 0 3
......................................................................TGTAAACATCCTCGACTGGAG.................................................................................................................... 21 1 2 6.00 12 3 5 0 0 2 2
...............................................................................................................CTTTCAGTCGGATGTTTGCAGTA......................................................................... 23 2 2 5.50 11 1 6 0 1 0 3
......................................................................TGTAAACATCCTCGACTGGAAGGT................................................................................................................. 24 1 2 5.50 11 4 6 0 0 0 1
......................................................................TGAAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 5.50 11 5 3 0 0 2 1
......................................................................TGTAAACATCCTCGACTGGCAGA.................................................................................................................. 23 2 2 5.50 11 7 0 0 0 4 0
......................................................................TGTAAACATCCTCGACTGGAAGAT................................................................................................................. 24 1 2 5.00 10 8 1 0 0 1 0
......................................................................TGTAAACATTCTCGACTGGAAA................................................................................................................... 22 2 2 5.00 10 1 1 2 2 2 2
......................................................................TGTAAACATCCTCGACTGGAAC................................................................................................................... 22 1 2 5.00 10 2 0 1 0 2 5
......................................................................TGTAAACATCCTCGACTGGGAGC.................................................................................................................. 23 1 2 5.00 10 6 3 0 0 0 1
......................................................................TGTAAACATCTTCGACTGGAAGCTT................................................................................................................ 25 2 2 5.00 10 9 0 0 0 1 0
...............................................................................................................CTTTCAGTCGGATGTTTACAGCC......................................................................... 23 1 3 4.67 14 0 7 1 0 0 6
......................................................................AGTAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 4.50 9 5 1 0 0 3 0
......................................................................TGTAAACATCCTCGACTGGACG................................................................................................................... 22 1 2 4.50 9 8 0 0 0 1 0
......................................................................CGTAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 4.50 9 4 1 0 1 3 0
......................................................................TCTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 4.50 9 4 4 1 0 0 0
......................................................................TGTAAACATCCTCGGCTGGAAGC.................................................................................................................. 23 1 2 4.50 9 5 3 0 0 1 0
......................................................................AGTAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 4.50 9 8 0 0 0 1 0
.....................................................................CTGTAAACATCCCCGACTGGA..................................................................................................................... 21 1 4 4.25 17 9 2 0 1 2 3
......................................................................TGTAAACATCTTCGACTGGA..................................................................................................................... 20 1 2 4.00 8 2 1 2 1 2 0
......................................................................TGTAAACAACCTCGACTGGAAGCT................................................................................................................. 24 1 2 4.00 8 6 1 0 0 0 1
.......................................................................GTAAACATCCTCGACTGG...................................................................................................................... 18 0 2 4.00 8 5 2 0 0 0 1
......................................................................TGTAAACATCCTCGACTGGAGGC.................................................................................................................. 23 1 2 4.00 8 5 2 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGC..................................................................................................................... 20 1 2 4.00 8 1 0 5 0 2 0
......................................................................TGTAAACATCCACGACTGGAAGCT................................................................................................................. 24 1 4 4.00 16 8 4 0 0 2 2
.....................................................................CTGTAAACATCCTCGACTGGAAGA.................................................................................................................. 24 1 2 4.00 8 2 0 0 0 6 0
......................................................................TGTAAACATCCTCGACAGGAAGCT................................................................................................................. 24 1 2 4.00 8 4 3 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGAAGCTAA............................................................................................................... 26 2 2 4.00 8 5 1 0 0 2 0
......................................................................TGTAAACATCCACGACTGGAAGC.................................................................................................................. 23 1 4 3.75 15 4 6 0 0 3 2
......................................................................TGTAAACATCCTAGACTGGAAGCT................................................................................................................. 24 1 3 3.67 11 3 3 0 1 1 3
......................................................................TGTAAACATCCTCGACTGGAAGCTG................................................................................................................ 25 0 2 3.50 7 5 1 0 0 1 0
......................................................................TATAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.50 7 5 2 0 0 0 0
......................................................................TGTAAACATCTTCGACTGGAAGA.................................................................................................................. 23 2 2 3.50 7 4 0 0 0 2 1
......................................................................GGTAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.50 7 7 0 0 0 0 0
......................................................................TGTAAACATCCTCAACTGGAAGC.................................................................................................................. 23 1 2 3.50 7 6 1 0 0 0 0
.....................................................................CTGTAAACATCCTCGACTGGAA.................................................................................................................... 22 0 2 3.50 7 2 1 0 0 4 0
......................................................................TGTAAACGTCCTCGACTGGAAG................................................................................................................... 22 1 2 3.50 7 4 2 0 0 1 0
......................................................................TGTACACATCCTCGACTGGAAG................................................................................................................... 22 1 2 3.50 7 6 1 0 0 0 0
......................................................................TGTAAACATCCTCTACTGGAAGCT................................................................................................................. 24 1 2 3.50 7 5 0 0 0 2 0
......................................................................TGTAGACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.50 7 7 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAGCA................................................................................................................. 23 1 2 3.50 7 6 1 0 0 0 0
................................................................................................................TTTCAGTCGGATGTTTGCA............................................................................ 19 0 2 3.50 7 1 4 0 0 0 2
................................................................................................................TTTCAGTCGGATGTTTGCAGA.......................................................................... 21 1 2 3.50 7 1 4 0 1 0 1
......................................................................TGTAAACATCCTCGACTGAAAGCT................................................................................................................. 24 1 2 3.50 7 2 3 0 1 1 0
......................................................................TGTAAACATCTTCGACTGGAAGCA................................................................................................................. 24 2 2 3.50 7 5 0 0 0 2 0
......................................................................TGTAAACATCCTCGACTGGGAG................................................................................................................... 22 1 2 3.00 6 5 0 0 0 1 0
......................................................................TGCAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 3.00 6 5 1 0 0 0 0
......................................................................TGTAAGCATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.00 6 4 0 0 1 1 0
......................................................................TCTAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.00 6 5 1 0 0 0 0
......................................................................TTTAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 3.00 6 4 1 0 1 0 0
......................................................................TGTAAACATCCTCGACTTGAAGC.................................................................................................................. 23 1 2 3.00 6 4 1 0 0 0 1
.......................................................................GTAAACATCCTCGACTGGAAGCTT................................................................................................................ 24 1 2 3.00 6 0 3 1 2 0 0
......................................................................TGTACACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.00 6 6 0 0 0 0 0
......................................................................TGTAAACATTCTCGACTGGAAGCA................................................................................................................. 24 2 2 3.00 6 5 0 0 0 1 0
......................................................................TGTAAACAATTTCGACTGGAAGCT................................................................................................................. 24 3 2 3.00 6 4 0 0 0 2 0
......................................................................TGTAAACATCCTCGACTGGAAGAAC................................................................................................................ 25 3 2 3.00 6 6 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGACGA.................................................................................................................. 23 2 2 3.00 6 3 0 0 0 3 0
......................................................................TGTAAACATCCTCGACTGGATGCT................................................................................................................. 24 1 2 3.00 6 4 1 0 0 1 0
......................................................................TGTAAACGTCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.00 6 5 1 0 0 0 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAGTT......................................................................... 23 2 2 3.00 6 1 1 0 2 0 2
......................................................................TGTGAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 3.00 6 2 1 0 0 2 1
......................................................................TGTAAACATCCTCGACTGCA..................................................................................................................... 20 1 2 3.00 6 0 0 4 2 0 0
......................................................................TGTAAATATCCTCGACTGGAAG................................................................................................................... 22 1 2 3.00 6 4 1 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGAGA................................................................................................................... 22 2 2 3.00 6 0 1 3 1 0 1
......................................................................TGTAAGCATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.50 5 3 1 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGAAGTA................................................................................................................. 24 2 2 2.50 5 3 1 0 1 0 0
..............................................................................TCCTCGACTGGAAGCT................................................................................................................. 16 0 2 2.50 5 0 1 0 3 0 1
......................................................................TGTAAACATCCTCGACTGGAAACT................................................................................................................. 24 1 2 2.50 5 3 1 1 0 0 0
......................................................................TGTAAACATCCTCGACTCGAAGCT................................................................................................................. 24 1 2 2.50 5 3 0 0 1 1 0
................................................................................................................TTTCAGTCGGATGTTTGCAGTT......................................................................... 22 2 2 2.50 5 0 3 0 2 0 0
......................................................................TGTAAACATCCTCGACTGGCA.................................................................................................................... 21 1 2 2.50 5 3 0 0 0 2 0
......................................................................TATAAACATCCTCGACTGGA..................................................................................................................... 20 1 2 2.50 5 2 1 2 0 0 0
......................................................................TGTAAACATCCTCGACT........................................................................................................................ 17 0 2 2.50 5 1 1 1 2 0 0
......................................................................TGTAAACATCGTCGACTGGAAGCT................................................................................................................. 24 1 2 2.50 5 4 1 0 0 0 0
......................................................................TGTAAACATCCTCGACTGTAAGCT................................................................................................................. 24 1 2 2.50 5 3 0 1 0 0 1
......................................................................TGTAAACATCTTCGACTGGAAA................................................................................................................... 22 2 2 2.50 5 2 0 2 0 0 1
......................................................................TGTAAACATCCTCGACTGGTAGC.................................................................................................................. 23 1 2 2.50 5 4 1 0 0 0 0
.....................................................................CTGTAAACATCCTCGACTGGAAA................................................................................................................... 23 1 2 2.50 5 0 2 0 0 2 1
......................................................................TGTAAACATCCTCGACTGGAAGCGT................................................................................................................ 25 2 2 2.50 5 3 1 0 0 1 0
......................................................................TGTAAACATCCTCGACTAGAAGC.................................................................................................................. 23 1 2 2.50 5 2 1 0 0 1 1
......................................................................TGTAAACATCCTCGACTGGAAAC.................................................................................................................. 23 1 2 2.50 5 4 1 0 0 0 0
......................................................................TCTAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.50 5 5 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAGA.................................................................................................................. 22 1 2 2.50 5 3 0 2 0 0 0
......................................................................TGGAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 2.50 5 3 0 0 0 2 0
......................................................................CGTAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.50 5 3 1 0 0 1 0
......................................................................TGTAAACATCCTCTACTGGAAGC.................................................................................................................. 23 1 2 2.50 5 4 0 1 0 0 0
......................................................................TGTAAACATCCTCGACTGGAAGCTTTT.............................................................................................................. 27 2 2 2.50 5 4 1 0 0 0 0
......................................................................TTTAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.50 5 4 1 0 0 0 0
........................................................................TAAACATCCTCGACTGGAAGC.................................................................................................................. 21 0 2 2.50 5 3 1 0 0 0 1
......................................................................TGTAAACATCCTCGACTGGAAAT.................................................................................................................. 23 2 2 2.50 5 1 2 0 1 1 0
.......................................................................GTAAACATCCTCGACTGGAAGCC................................................................................................................. 23 1 2 2.50 5 4 0 0 0 1 0
......................................................................TGTAAACACTCTCGACTGGAAGCT................................................................................................................. 24 2 2 2.50 5 5 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAA................................................................................................................... 21 1 2 2.50 5 0 3 0 0 0 2
...............................................................................................................CTTTCAGTCGGATGTTT............................................................................... 17 0 3 2.33 7 3 1 0 0 0 3
...................................................................ATTTGTAAACATCCTCGACTGGAAGCT................................................................................................................. 27 3 4 2.25 9 0 6 0 0 0 3
......................................................................TGTATACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 2.00 4 3 0 0 0 1 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAGGAAC....................................................................... 25 3 2 2.00 4 2 0 0 0 2 0
......................................................................TGTAAACATCCTCGACTGGTAA................................................................................................................... 22 2 2 2.00 4 3 0 0 0 1 0
......................................................................TGTAAACATCCTCGCCTGGAAGA.................................................................................................................. 23 2 2 2.00 4 2 0 1 0 1 0
......................................................................TGTAAACATCCTCCACTGGAAGC.................................................................................................................. 23 1 2 2.00 4 2 1 0 0 1 0
.....................................................................CTGTAAACATCCCCGACTGGAA.................................................................................................................... 22 1 4 2.00 8 2 2 0 1 3 0
......................................................................TGTCAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.00 4 3 0 0 0 1 0
......................................................................TGTAAACATCCTCGACGGGAAGCT................................................................................................................. 24 1 2 2.00 4 4 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGAAGAC................................................................................................................. 24 2 2 2.00 4 1 0 0 0 3 0
.................................................................................................................TTCAGTCGGATGTTTGCAGC.......................................................................... 20 0 2 2.00 4 4 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGAATCT................................................................................................................. 24 1 2 2.00 4 3 0 0 0 1 0
......................................................................TATAAACATCCTCGACTGGAAGA.................................................................................................................. 23 2 2 2.00 4 3 0 0 0 1 0
......................................................................TGGAAACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 2.00 4 3 0 0 0 1 0
......................................................................TGCAAACATCCTCGACTGGAA.................................................................................................................... 21 1 2 2.00 4 1 2 0 0 1 0
......................................................................TATAAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.00 4 4 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAGCAT................................................................................................................ 24 2 2 2.00 4 2 0 0 0 2 0
......................................................................TGTAAACATCCTCAACTGGAAG................................................................................................................... 22 1 2 2.00 4 3 1 0 0 0 0
......................................................................TGTTAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.00 4 3 1 0 0 0 0
......................................................................TGTAAACATACTCGACTGGAAGCT................................................................................................................. 24 1 2 2.00 4 2 1 0 0 1 0
......................................................................TGTAAACATCCTCGCCTGGAAG................................................................................................................... 22 1 2 2.00 4 2 0 0 0 2 0
......................................................................TGTAAACATCATCGACTGGAAGCTT................................................................................................................ 25 2 2 2.00 4 4 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGAATC.................................................................................................................. 23 1 2 2.00 4 1 1 0 0 1 1
......................................................................TGTAAACGTCCTCGACTGGA..................................................................................................................... 20 1 2 2.00 4 1 0 3 0 0 0
......................................................................TGTAAACATCATCGACTGGAAG................................................................................................................... 22 1 2 2.00 4 1 0 0 0 2 1
......................................................................TGTAAACATGCTCGACTGGAAGCT................................................................................................................. 24 1 2 2.00 4 4 0 0 0 0 0
......................................................................TGTAAATATCCTCGACTGGAAGA.................................................................................................................. 23 2 2 2.00 4 3 0 0 0 0 1
......................................................................TGTAAACATCTTCGACTGGAAGCTA................................................................................................................ 25 2 2 2.00 4 4 0 0 0 0 0
...............................................................................................................TTTTCAGTCGGATGTTTGCAG........................................................................... 21 1 2 2.00 4 4 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAGCTA................................................................................................................ 24 1 2 2.00 4 0 1 1 0 1 1
......................................................................TGAAAACATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 2.00 4 2 1 0 0 1 0
......................................................................TGTAAACATCATCGACTGGAA.................................................................................................................... 21 1 2 2.00 4 0 1 1 0 0 2
......................................................................TGTAAACATCCTCAACTGGA..................................................................................................................... 20 1 2 2.00 4 1 0 2 1 0 0
......................................................................CGTAAACATCCTCGACTGGAAGCA................................................................................................................. 24 2 2 2.00 4 3 1 0 0 0 0
......................................................................TGTAAACATCCTCGACTGTAAGC.................................................................................................................. 23 1 2 2.00 4 2 0 0 0 0 2
......................................................................TGTAATCATCCTCGACTGGAAG................................................................................................................... 22 1 2 2.00 4 3 0 0 0 0 1
......................................................................TGTAAACATCCTCGAATGGAAGCT................................................................................................................. 24 1 2 2.00 4 3 0 0 0 1 0
................................................................................................................TTTCAGTCGGATGTTTACAGCC......................................................................... 22 1 3 1.67 5 1 2 0 1 0 1
......................................................................TGTAAACATCCTGGACTGGAAGCT................................................................................................................. 24 1 3 1.67 5 3 0 0 0 0 2
......................................................................TGTAAAGATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 1.50 3 1 1 0 0 1 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAT........................................................................... 21 1 2 1.50 3 0 1 0 0 0 2
......................................................................TGTAAACATCCTCGACCGGA..................................................................................................................... 20 1 2 1.50 3 1 0 1 0 1 0
......................................................................TGTAAACATCCTCGACTGGAGT................................................................................................................... 22 2 2 1.50 3 0 1 1 0 0 1
......................................................................TGTAAACATCCTCGACTGGAAGCGA................................................................................................................ 25 2 2 1.50 3 2 0 1 0 0 0
......................................................................TGTAAACTTCCTCGACTGGA..................................................................................................................... 20 1 2 1.50 3 0 0 2 1 0 0
......................................................................TGTAAACATCCTCGACTGGAGC................................................................................................................... 22 2 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAATCATCCTCGACTGGAAGC.................................................................................................................. 23 1 2 1.50 3 3 0 0 0 0 0
......................................................................TGTGAACATCCTCGACTGGAAG................................................................................................................... 22 1 2 1.50 3 3 0 0 0 0 0
.......................................................................GTAAACATTCTCGACTGGAAGCA................................................................................................................. 23 2 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACACCCTCGACTGGA..................................................................................................................... 20 1 2 1.50 3 1 0 2 0 0 0
......................................................................TGTAAACATCCTCGACTGGAAGCAG................................................................................................................ 25 1 2 1.50 3 2 1 0 0 0 0
...............................................................................................................CTTTCAGTCGGATGTTTG.............................................................................. 18 0 2 1.50 3 2 0 0 0 0 1
......................................................................TGTAAACATCCTCGACTGGACGCA................................................................................................................. 24 2 2 1.50 3 2 0 0 0 1 0
......................................................................TGTAAACAACCTCGACTGGAAGC.................................................................................................................. 23 1 2 1.50 3 2 0 0 0 1 0
......................................................................TGTAAACATCCGCGACTGGAAGCT................................................................................................................. 24 1 4 1.50 6 5 0 0 0 1 0
......................................................................TGTAAACATCCTCGTCTGGAAG................................................................................................................... 22 1 2 1.50 3 1 0 0 0 2 0
.......................................................................GTAAACATCCTCGACTGGAAGT.................................................................................................................. 22 1 2 1.50 3 0 0 1 1 0 1
......................................................................TGTAAACATCCTCGACTGGTA.................................................................................................................... 21 1 2 1.50 3 1 1 0 0 1 0
......................................................................TGTAAACATCCTCGACTCGAAGC.................................................................................................................. 23 1 2 1.50 3 2 1 0 0 0 0
......................................................................TGTAAACATCCTCGTCTGGAAGCT................................................................................................................. 24 1 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACACCCTCGACTGGAA.................................................................................................................... 21 1 2 1.50 3 1 0 0 1 0 1
......................................................................TGTAAACATCATCGACTGGA..................................................................................................................... 20 1 2 1.50 3 1 1 1 0 0 0
......................................................................TGTAAACACCCTCGACTGGAAGCA................................................................................................................. 24 2 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACATCGTCGACTGGA..................................................................................................................... 20 1 2 1.50 3 0 1 1 1 0 0
......................................................................TGTAAACATCATCGACTGGAAA................................................................................................................... 22 2 2 1.50 3 1 1 0 0 1 0
......................................................................TGCAAACATCCTCGACTGGA..................................................................................................................... 20 1 2 1.50 3 2 1 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGATGC.................................................................................................................. 23 1 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACATCCTCGACTGGAGG................................................................................................................... 22 1 2 1.50 3 1 0 0 0 2 0
......................................................................TGTAACCATCCTCGACTGGAAGA.................................................................................................................. 23 2 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACACCCTCGACTGGAAG................................................................................................................... 22 1 2 1.50 3 2 1 0 0 0 0
......................................................................TGTAAACATCCTCGGCTGGAAG................................................................................................................... 22 1 2 1.50 3 2 1 0 0 0 0
......................................................................TGTAAACATCCTCCACTGGAAGCT................................................................................................................. 24 1 2 1.50 3 2 0 0 0 0 1
......................................................................TGTAAACATTCTCGACTGGAAGT.................................................................................................................. 23 2 2 1.50 3 1 0 2 0 0 0
........................................................................TAAACATCCTCGACTGGAAG................................................................................................................... 20 0 2 1.50 3 3 0 0 0 0 0
.......................................................................GTAAACATCCTCGACTGGAAGCCT................................................................................................................ 24 2 2 1.50 3 1 0 1 1 0 0
......................................................................TGTAAACATCCTCGACTGGTAGCT................................................................................................................. 24 1 2 1.50 3 1 0 0 0 2 0
................................................................................................................TTTCAGTCGGATGTTTGCAGCAA........................................................................ 23 2 2 1.50 3 1 1 0 0 0 1
......................................................................TGTAAACATCCTCGACTGGTAG................................................................................................................... 22 1 2 1.50 3 1 0 0 0 1 1
......................................................................TGTAAACCTCCTCGACTGGAAGC.................................................................................................................. 23 1 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACATCCTCGGCTGGAAGCA................................................................................................................. 24 2 2 1.50 3 3 0 0 0 0 0
...............................................................................................................CTTTCAGTCGGATGTTTGCAGACA........................................................................ 24 2 2 1.50 3 0 2 0 0 0 1
......................................................................TGTAAACATCCTCGACTAGAAG................................................................................................................... 22 1 2 1.50 3 2 0 0 0 1 0
.....................................................................CTGTAAACATCCTCGACTGGAAGCA................................................................................................................. 25 1 2 1.50 3 3 0 0 0 0 0
......................................................................TGTAAACATCATCGACTGGAAGCA................................................................................................................. 24 2 2 1.50 3 1 1 0 0 1 0
......................................................................TGTAAACATCCTCGACTGGAAGAGC................................................................................................................ 25 3 2 1.50 3 2 0 0 0 1 0
......................................................................CGTAAACATCCTCGACTGGAA.................................................................................................................... 21 1 2 1.50 3 0 0 0 0 1 2
........................................................................TAAACATCCTCGACTGGAAGCTG................................................................................................................ 23 0 2 1.50 3 1 1 0 0 0 1
......................................................................TGTATACATCCTCGACTGGAAGCT................................................................................................................. 24 1 2 1.50 3 2 0 0 0 0 1
......................................................................TGTACACATCCTCGACTGGA..................................................................................................................... 20 1 2 1.50 3 2 0 1 0 0 0
......................................................................TGTAAACATCCTCGACTGGTAT................................................................................................................... 22 2 3 1.33 4 4 0 0 0 0 0
.......................................................................TGTAACATCCTCGACTGGAAGCT................................................................................................................. 23 3 3 1.33 4 4 0 0 0 0 0
...................................................................ATTTGTAAACATCCTCGACTGGAAGC.................................................................................................................. 26 3 4 1.25 5 0 5 0 0 0 0

Anti-sense strand reads

GGACAGGTAGAGTCCCTGGGAAGAGGTCCCATTGGTCTGTCGTTGTTCACAGGGACGCTGTCACTCGCCGACATTTGTAGGAGCTGACCTTCGACACTCCGACTTCTGCCCGAAAGTCAGCCTACAAACGTCGGCGGCTGACGGAGGGCGTAGTCCTCGACGGCATCCTCGTCACCAGAGGAATCGGGGCGACCTGTGGAGTGGGAG

***********************************************************....((((..((((((((((((((((..(((((((((((((..........)).)))))))))))))))))))))))))))..))))......******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes
.............................................................................................................CCGAAGGTCAGCCCACAAATGT............................................................................ 22 3 7 0.43 3 2 1

Generated: 09/01/2015 at 11:21 AM