ID:

ssc-mir-29c

Coordinate:

chr9:148552997-148553084 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.7

Sense Strand Reads

TGCCTCCTGCAGTGCCATGGTGCTGGACCCCACCGAGCCCCGCTGGACCCATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGAAAAGCAGCAGCTTCGAGGCCTCATGCCAAGTCTGGTCAGCGCAGCCTGTG

****************************************************((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))....************************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR139076

testes
SRR066809

ovary
SRR066810

testes
SRR1274764

testes
SRR1274763

ovary
.......................................................................................................TAGCACCATTTGAAATCGGTTA............................................................... 22 0 1 8165.00 8165 5643 1817 278 199 125 103
.......................................................................................................TAGCACCATTTGAAATCGGTT................................................................ 21 0 1 1828.00 1828 353 166 708 378 122 101
.......................................................................................................TAGCACCATTTGAAATCGGT................................................................. 20 0 1 267.00 267 10 7 116 79 30 25
.......................................................................................................TAGCACCATTTGAAATCGGTTAA.............................................................. 23 1 1 259.00 259 106 44 18 4 48 39
.......................................................................................................TAGCACCATTTGAAATCGGTTT............................................................... 22 1 1 177.00 177 105 43 9 11 3 6
.......................................................................................................TAGCACCATTTGAAATCGGTTAT.............................................................. 23 0 1 111.00 111 59 15 5 7 10 15
.......................................................................................................TAGCACCATTTGAAATCGG.................................................................. 19 0 1 100.00 100 16 3 55 23 2 1
...................................................................ACCGATTTCTCCTGGTGTTCAGA.................................................................................................. 23 0 1 70.00 70 5 2 26 29 2 6
.................................................................TGACCGATTTCTCCTGGTGTT...................................................................................................... 21 0 1 62.00 62 13 13 20 13 2 1
...................................................................ACCGATTTCTCCTGGTGTTCAG................................................................................................... 22 0 1 61.00 61 3 1 37 18 0 2
.................................................................TGACCGATTTCTCCTGGTGTTCT.................................................................................................... 23 1 1 58.00 58 0 2 25 25 5 1
.......................................................................................................TAGCACTATTTGAAATCGGTTA............................................................... 22 1 1 57.00 57 49 8 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTC..................................................................................................... 22 0 1 54.00 54 2 3 15 32 1 1
.......................................................................................................TAGCATCATTTGAAATCGGTTA............................................................... 22 1 1 51.00 51 39 12 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCA.................................................................................................... 23 0 1 49.00 49 1 1 16 29 0 2
...................................................................ACCGATTTCTCCTGGTGTTCA.................................................................................................... 21 0 1 46.00 46 5 1 25 15 0 0
........................................................................................................AGCACCATTTGAAATCGGTTA............................................................... 21 0 1 35.00 35 25 6 3 1 0 0
.......................................................................................................TAGCACCATTTGAAATCGGA................................................................. 20 1 1 33.00 33 0 0 19 1 3 10
.................................................................TGACCGATTTCTCCTGGTGTTA..................................................................................................... 22 1 1 27.00 27 3 4 15 5 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTA................................................................ 21 1 1 27.00 27 4 6 11 6 0 0
..................................................................GACCGATTTCTCCTGGTGTTCA.................................................................................................... 22 0 1 26.00 26 3 3 9 11 0 0
......................................................................................................CTAGCACCATTTGAAATCGGTTA............................................................... 23 0 1 25.00 25 8 14 1 1 0 1
.......................................................................................................TAGCACCATTTGAAATTGGTTA............................................................... 22 1 1 25.00 25 19 6 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTAA............................................................... 22 1 1 24.00 24 8 8 1 1 2 4
.......................................................................................................TAGCACCATTTGAAATCGGGTA............................................................... 22 1 1 24.00 24 22 2 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAC.............................................................. 23 1 1 24.00 24 0 1 2 0 17 4
.......................................................................................................TAGCACCATTTGACATCGGTTA............................................................... 22 1 1 23.00 23 16 7 0 0 0 0
.......................................................................................................TAGTACCATTTGAAATCGGTTA............................................................... 22 1 1 23.00 23 14 7 2 0 0 0
.......................................................................................................TAGCACCATTTGAACTCGGTTA............................................................... 22 1 1 23.00 23 20 3 0 0 0 0
.........................................................................................................GCACCATTTGAAATCGGTTA............................................................... 20 0 1 22.00 22 14 8 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTG............................................................... 22 1 1 21.00 21 3 6 3 0 2 7
.......................................................................................................TAGCACCATTTGAAATCGGTTC............................................................... 22 1 1 21.00 21 16 2 0 0 0 3
..................................................................GACCGATTTCTCCTGGTGTT...................................................................................................... 20 0 1 20.00 20 12 4 3 1 0 0
.......................................................................................................TAGCACCATTTGAAATCG................................................................... 18 0 1 18.00 18 1 0 14 3 0 0
.......................................................................................................TAGCACTATTTGAAATCGGTT................................................................ 21 1 1 17.00 17 9 5 2 1 0 0
..................................................................GACCGATTTCTCCTGGTGTTC..................................................................................................... 21 0 1 17.00 17 2 3 4 8 0 0
.......................................................................................................TAGCACCATTTGAAATCGTTTA............................................................... 22 1 1 17.00 17 15 2 0 0 0 0
.......................................................................................................TAGCACCATTTGCAATCGGTTA............................................................... 22 1 1 16.00 16 13 3 0 0 0 0
.......................................................................................................TAGCATCATTTGAAATCGGTT................................................................ 21 1 1 15.00 15 12 2 0 1 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAG.............................................................. 23 1 1 15.00 15 0 2 0 1 5 7
......................................................................................................CTAGCACCATTTGAAATCGGTT................................................................ 22 0 1 15.00 15 1 2 8 4 0 0
.......................................................................................................TAGCACCATATGAAATCGGTT................................................................ 21 1 2 14.50 29 3 0 16 10 0 0
.......................................................................................................TAGCACCATTTGAAATCGGCTA............................................................... 22 1 1 14.00 14 7 7 0 0 0 0
.......................................................................................................TAGCACCATATGAAATCGGTTA............................................................... 22 1 2 13.00 26 12 1 9 4 0 0
...........................................................................................................ACCATTTGAAATCGGTTA............................................................... 18 0 1 13.00 13 9 4 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTCA............................................................... 22 1 1 11.00 11 5 5 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGAAA............................................................... 22 2 2 10.00 20 0 1 1 0 14 4
...................................................................ACCGATTTCTCCTGGTGTTCAGT.................................................................................................. 23 1 1 10.00 10 0 0 6 3 1 0
.................................................................TGACCGATTTCTCCTGGTGT....................................................................................................... 20 0 1 10.00 10 3 3 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAG............................................................. 24 2 2 9.50 19 1 0 2 3 5 8
.................................................................TGACCGATTTCTCCTGGTGTTT..................................................................................................... 22 1 1 9.00 9 1 2 1 4 1 0
.......................................................................................................TAGCAGCATTTGAAATCGGTTA............................................................... 22 1 1 9.00 9 6 2 0 1 0 0
.......................................................................................................TAGCACCATGTGAAATCGGTT................................................................ 21 1 2 8.50 17 1 0 9 7 0 0
.......................................................................................................TAGCATTATTTGAAATCGGTTA............................................................... 22 2 3 8.33 25 21 4 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGATA............................................................... 22 1 1 8.00 8 6 2 0 0 0 0
..................................................................GACCGATTTCTCCTGGTGTTCAG................................................................................................... 23 0 1 8.00 8 1 1 3 2 1 0
...................................................................ACCGATTTCTCCTGGTGTTC..................................................................................................... 20 0 1 8.00 8 3 1 1 3 0 0
.......................................................................................................TAGCACCATTTGAAATCTGTTA............................................................... 22 1 1 8.00 8 8 0 0 0 0 0
.......................................................................................................TCGCACCATTTGAAATCGGTTA............................................................... 22 1 1 8.00 8 6 2 0 0 0 0
......................................................................................................ATAGCACCATTTGAAATCGGTTA............................................................... 23 1 1 8.00 8 5 3 0 0 0 0
.......................................................................................................TAGCACCATTTGGAATCGGTTA............................................................... 22 1 1 8.00 8 4 3 1 0 0 0
.......................................................................................................TAGCCCCATTTGAAATCGGTTA............................................................... 22 1 1 8.00 8 4 4 0 0 0 0
.......................................................................................................TGGCACCATTTGAAATCGGTTA............................................................... 22 1 1 8.00 8 7 0 0 0 0 1
........................................................................................................AGCACCATTTGAAATCGGTT................................................................ 20 0 1 8.00 8 2 1 1 4 0 0
.......................................................................................................TAGCACCATGTGAAATCGGTTA............................................................... 22 1 2 7.50 15 7 2 1 5 0 0
.......................................................................................................TAGTACCATTTGAAATCGGTT................................................................ 21 1 1 7.00 7 6 0 1 0 0 0
.......................................................................................................TAGCACCGTTTGAAATCGGTTA............................................................... 22 1 1 7.00 7 6 0 0 0 0 1
.................................................................TGACCGATTTCTCCTGGTGTTCAGA.................................................................................................. 25 0 1 7.00 7 0 0 3 4 0 0
.......................................................................................................TACCACCATTTGAAATCGGTTA............................................................... 22 1 1 7.00 7 6 1 0 0 0 0
..................................................................GACCGATTTCTCCTGGTGTTA..................................................................................................... 21 1 1 6.00 6 0 4 0 2 0 0
.......................................................................................................TAGCGCCATTTGAAATCGGTTA............................................................... 22 1 1 6.00 6 6 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCAGTTA............................................................... 22 1 1 5.00 5 3 1 1 0 0 0
.......................................................................................................TAGCACCATTTAAAATCGGTTA............................................................... 22 1 1 5.00 5 4 0 0 1 0 0
.......................................................................................................AAGCACCATTTGAAATCGGTTA............................................................... 22 1 1 5.00 5 3 2 0 0 0 0
.......................................................................................................TAGCACCATTTGAACTCGGTT................................................................ 21 1 1 5.00 5 3 2 0 0 0 0
.......................................................................................................TATCACCATTTGAAATCGGTTA............................................................... 22 1 1 5.00 5 3 2 0 0 0 0
.......................................................................................................TAGCACCACTTGAAATCGGTTA............................................................... 22 1 1 5.00 5 4 1 0 0 0 0
.......................................................................................................TAGCACCATTCGAAATCGGTTA............................................................... 22 1 1 5.00 5 4 1 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCAG................................................................................................... 24 0 1 5.00 5 0 0 1 3 0 1
.......................................................................................................TAGCACCTTTTGAAATCGGTTA............................................................... 22 1 1 4.00 4 4 0 0 0 0 0
.......................................................................................................TAGCACTATTTGAAATCGGTTAA.............................................................. 23 2 1 4.00 4 3 1 0 0 0 0
.......................................................................................................CAGCACCATTTGAAATCGGTTA............................................................... 22 1 1 4.00 4 3 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTATT............................................................. 24 1 1 4.00 4 0 0 2 0 1 1
.......................................................................................................TAGCACCATTTGAAATCGGTTACT............................................................. 24 2 1 4.00 4 0 1 0 0 2 1
.......................................................................................................TAGCACCATTTGAAATCGGTTAAA............................................................. 24 2 2 4.00 8 1 1 0 0 5 1
.........................................................................................................GCACCATTTGAAATCGGTTATT............................................................. 22 1 1 4.00 4 2 0 1 0 1 0
.......................................................................................................TAGCACCATTTGAAATCGGTAAA.............................................................. 23 2 1 4.00 4 0 0 0 0 1 3
.......................................................................................................TAGCACCATTTGAAATCGGAT................................................................ 21 1 1 4.00 4 1 0 1 0 1 1
...................................................................ACCGATTTCTCCTGGTGTTCAGAA................................................................................................. 24 1 1 4.00 4 0 0 2 1 1 0
.......................................................................................................TAGCACCATTTGAAATCGGAA................................................................ 21 2 2 3.50 7 4 0 3 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAGA............................................................. 24 2 2 3.50 7 0 0 5 1 1 0
.............................................................................................................CATTTGAAATCGGTTA............................................................... 16 0 3 3.33 10 0 0 0 0 4 6
.............................................................................................................CATTTGAAATCGGTT................................................................ 15 0 4 3.25 13 0 0 0 0 8 5
.......................................................................................................TAGCACCATTTGAAATCGGTTAAG............................................................. 24 1 1 3.00 3 0 0 0 0 1 2
......................................................................................................CTAGCACCATTTGAAATCGGTTT............................................................... 23 1 1 3.00 3 2 0 0 0 0 1
.......................................................................................................TAGCACCATTTGAGATCGGTTA............................................................... 22 1 1 3.00 3 2 0 1 0 0 0
.......................................................................................................TAGCACCATTTGAAACCGGTTA............................................................... 22 1 1 3.00 3 2 1 0 0 0 0
.......................................................................................................TAGCACCATTTGACATCGGTT................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTTT.............................................................. 23 1 1 3.00 3 2 0 0 0 0 1
.................................................................TGACCGATTTCTCCTGGTGTTG..................................................................................................... 22 1 1 3.00 3 0 0 2 1 0 0
.......................................................................................................TAGCACCATTTCAAATCGGTTA............................................................... 22 1 1 3.00 3 2 1 0 0 0 0
......................................................................................................CTAGCACCATTTGAAATCGGT................................................................. 21 0 1 3.00 3 0 0 1 2 0 0
.......................................................................................................TAGCACCATTTTAAATCGGTTA............................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................................TAGCACCATTTGGAATCGGTT................................................................ 21 1 1 3.00 3 1 0 1 1 0 0
..........................................................................................................CAGCATTTGAAATCGGTTA............................................................... 19 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAGTCGGTTA............................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................................TAGCAGCATTTGAAATCGGTT................................................................ 21 1 1 3.00 3 0 2 0 0 0 1
.......................................................................................................TAACACCATTTGAAATCGGTTA............................................................... 22 1 1 3.00 3 1 1 1 0 0 0
.......................................................................................................TAGCACCATTTGCAATCGGTT................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAAT............................................................. 24 2 1 3.00 3 2 0 0 0 0 1
......................................................................................................CTAGCACCATTTGAAATCGGTTAA.............................................................. 24 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAGT............................................................. 24 2 1 3.00 3 0 0 1 1 0 1
.......................................................................................................TAGCACCCTTTGAAATCGGTTA............................................................... 22 1 1 3.00 3 1 2 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTTA.............................................................. 23 2 1 3.00 3 0 2 0 1 0 0
..................................................................GACCGATTTCTCCTGGTGTTCAGA.................................................................................................. 24 0 1 3.00 3 0 0 1 1 0 1
............................................................................................................CCATTTGAAATCGGTT................................................................ 16 0 2 2.50 5 0 0 0 0 2 3
.................................................................TGACCGATTTCTCCTGGTGTTCTA................................................................................................... 24 2 1 2.00 2 0 0 0 1 0 1
.......................................................................................................TAGCACCATTTGAACTCGGTTAA.............................................................. 23 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................................CACCATTTGAAATCGGTTACT............................................................. 21 2 2 2.00 4 0 1 0 0 1 2
.................................................................TGACCGATTTCTCCTGGTGTTCAGT.................................................................................................. 25 1 1 2.00 2 0 0 1 0 1 0
.........................................................................................................GCACCATTTGAAATCGGTTACT............................................................. 22 2 1 2.00 2 0 0 0 0 1 1
.......................................................................................................TAGCACCATTTGAAATCGGATT............................................................... 22 2 1 2.00 2 0 0 1 0 1 0
.......................................................................................................TAGCACCATTTGAAATAGGTTA............................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGTT................................................................. 20 1 1 2.00 2 1 1 0 0 0 0
.......................................................................................................TAGCACCATTTGTAATCGGTTA............................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAGATCGGTT................................................................ 21 1 1 2.00 2 0 1 1 0 0 0
.........................................................................................................TCACCATTTGAAATCGGTTA............................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................TAGCACCATTAGAAATCGGTT................................................................ 21 1 1 2.00 2 0 0 0 2 0 0
.......................................................................................................TAGCATCATTTGAAATCGGTTAT.............................................................. 23 1 1 2.00 2 0 1 0 1 0 0
..........................................................................................................CACCATTTGAAATCGGTTAC.............................................................. 20 1 1 2.00 2 0 1 0 0 1 0
.........................................................................................................GCACCATTTGACATCGGTTA............................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGT......................................................................................................... 18 0 1 2.00 2 0 0 1 1 0 0
.......................................................................................................TAGCACCATTTGAAATCAGTT................................................................ 21 1 4 2.00 8 3 1 1 3 0 0
............................................................................................................CCATTTGAAATCGGTTA............................................................... 17 0 2 2.00 4 0 0 0 0 0 4
..................................................................GACCGATTTCTCCTGGTGTTT..................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0
.........................................................................................................GCACCATTTGAAATCGGTTATG............................................................. 22 0 1 2.00 2 0 0 0 0 1 1
.......................................................................................................TAGCGCCATTTGAAATCGGTT................................................................ 21 1 1 2.00 2 0 0 2 0 0 0
.......................................................................................................TAGCACTATTTGAAATCGGTTT............................................................... 22 2 1 2.00 2 1 1 0 0 0 0
...................................................................................................CGACTAGCACCATCTGAAATCGGTTA............................................................... 26 3 2 2.00 4 4 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATC.................................................................... 17 0 4 1.75 7 3 1 1 0 1 1
..........................................................................................................TAGCATTTGAAATCGGTTA............................................................... 19 2 20 1.55 31 28 3 0 0 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAGA............................................................ 25 2 2 1.50 3 0 0 0 3 0 0
......................................................................................................CTAGCACCATATGAAATCGGTT................................................................ 22 1 2 1.50 3 0 0 2 1 0 0
..............................................................................................................ATTTGAAATCGGTTA............................................................... 15 0 4 1.50 6 2 1 1 0 1 1
.......................................................................................................TAGCATTATTTGAAATCGGTT................................................................ 21 2 3 1.33 4 1 3 0 0 0 0
......................................................................................................CTAGCACCATTTGAAATCAGTT................................................................ 22 1 3 1.33 4 1 0 0 2 0 1
.......................................................................................................TAGCACCATTTGAAA...................................................................... 15 0 18 1.28 23 17 4 1 1 0 0
.........................................................................................................GCACCATTTGAAATCGGTTAA.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGGTAT.............................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCAGTTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................CTAGCACCATTTGAAATCGGTA................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATCAGTTAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................ATAGCACCATTTGAAATCGGTTAA.............................................................. 24 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................AAGCACCATTTGAAATCGGCTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..................................................................GACCGATTTCTCCTGGTGTTCAGAT................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1
.......................................................................................................TAGCCCCAATTGAAATCGGTTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCGTTTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
...................................................................ACCGATTTCTCCTGGTGTTCAGAGTC............................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCAAT.................................................................................................. 25 2 1 1.00 1 0 0 1 0 0 0
......................................................................................................CTAGCACCATGTGAAATCGGTT................................................................ 22 1 2 1.00 2 0 0 0 2 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTC................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................GTAGCACCATTTGAAATCGGTTAT.............................................................. 24 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAGT............................................................ 25 3 2 1.00 2 1 0 1 0 0 0
........................................CGCTGGACCCATCTCTTACACAGGCA.......................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
........................................................................................................AGCACCATTTGAAATCGGTTAA.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACAATTTGAAATCGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAACCGGGTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................TTAGCACCATTTGAAATCGGTTA............................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGCTAA.............................................................. 23 2 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATTGGTT................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGG................................................................. 20 1 1 1.00 1 0 0 0 0 0 1
.......................................................................................................TAGCACCATTTGAAATCGGTTACGAAA.......................................................... 27 3 1 1.00 1 1 0 0 0 0 0
...................................................................................................AGACTAGCACCATCTGAAATCGGTTA............................................................... 26 3 2 1.00 2 0 2 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCAGAG................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATTTGAAGTCGGTT................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
..................................................................GACCGATTTCTCCTGGTGT....................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.....................................................................CGATTTCTCTTGGTGTTCAGA.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAAGAGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................TGACCGATTTTTCCTGGTGTTC..................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................................GCACCATTTGAAATCGGTTAT.............................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TCGCCCCATTTGAAATCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGGT............................................................ 25 3 2 1.00 2 0 0 2 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCAT................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATTTGCAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACTATTTGAACTCGGTTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACAATTTTAAATCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAATTCGGTT................................................................ 21 1 1 1.00 1 0 0 0 0 1 0
..................................................................GACCGATTTCTCCTGGTGTTCAGAGT................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0
...................................................................ACCGATTTCTCCTGGTGTTCAGAT................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 1
.......................................................................................................TAGCGCCATTTGCAATCGGTTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..................................................................GACCGATTTCTCCTGGTGTTCAGT.................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATATGAAATCGGT................................................................. 20 1 2 1.00 2 0 0 2 0 0 0
.................................................................TGACCGATTTCTCCTGGCGTT...................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
...................................................................ACCGATTTCTCCTGGTGTTA..................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATTTGAAATCGTTA................................................................ 21 2 4 1.00 4 3 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCTGTT................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................ACCGATTTCTCCTGGCGTTCAA................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAAACGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTTG.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGA....................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................................GACCGATTTCTCCTGGTGTTCAGG.................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGTATCATTTGAAATCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................GAGCACCATTTGAAATCGGTTA............................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGTACCATTCGAAATCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGACCTCGGTT................................................................ 21 2 1 1.00 1 0 1 0 0 0 0
.................................................................................................TTTGTCTAGCACCATTTGAAATCGGTTACT............................................................. 30 2 1 1.00 1 0 0 0 0 1 0
...................................................................ATCGATTTCTCCTGGTGTTCAGA.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................AGCACCATTTGAAATCGGTTT............................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................AAGCACCATTTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................................ACCATTTGAAATCGGT................................................................. 16 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATTTAAAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTACGGA........................................................... 26 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACTATTTGAAATCGGT................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGTACCATTTGACATCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................ACCGATTTCTCCTGGTGCTCAGA.................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCATCATTTGAAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCGGA.................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTTT.................................................................................................... 23 2 2 1.00 2 0 1 0 1 0 0
.................................................................TGACCGATTTCTCCTGGTGTTGA.................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TCGCACCATTTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATTTGACATCGGTTT............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................ATTTAGCACCATTTGAAATCGGTT................................................................ 24 2 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TTGCACCATTTGAAATCGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................CGACCGATTTCTCCTGGTGTTT..................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................ACCGATTTCTCCTAGTGTTCA.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCCTTTGAAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TGGCACCATTTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGTTT................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................ATAGCACCATTTGAAATCGGTAA............................................................... 23 2 1 1.00 1 0 1 0 0 0 0
................................................................CTGACCGATTTCTCCTGGTGTT...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATATGAAATCGG.................................................................. 19 1 2 1.00 2 0 0 2 0 0 0
.......................................................................................................TAGCACCATTTGAATTCGGTTA............................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCGCCATTTGAAATCGG.................................................................. 19 1 1 1.00 1 0 0 1 0 0 0
.................................................................TGACCGATTTCCCCTGGTGTTCT.................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGGACCATTTGAAATCGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................AAGCACCATTTGAGATCGGTTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCAGAGT................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................ACTAGCACCATTTGAAATCGGTTAA.............................................................. 25 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................CAGCATCATTTGAAATCGGTTAT.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTGA.............................................................. 23 2 1 1.00 1 0 0 0 0 0 1
...................................................................ACCGATTCCTCCTGGTGTTCA.................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................ATTTAGCACCATTTGAAATCGGTTA............................................................... 25 2 1 1.00 1 0 0 1 0 0 0
.................................................................TGACCGATTTCTTCTGGTGTT...................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCAATTGAAATCGGTT................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATGGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................CAGCATCATTTGAAATCGGTTA............................................................... 22 2 1 1.00 1 0 1 0 0 0 0
......................................................................................................CTAGCACCATTTGAAATCGGATT............................................................... 23 2 1 1.00 1 0 0 0 0 1 0
.................................................................TGACCGATTTCTCCTGGGGTTC..................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................................GACCGATTTCTCCTGGCGTT...................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTGTTCC.................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCAATTGAAATCGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................ACCGATTTCTCCTGGTCTTCA.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TCGCACCATTTGAACTCGGTTA............................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................AATAGCACCATTTGAAATCGGTTA............................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...................................................................................................CGGCTAGCACCATCTGAAATCGGTTA............................................................... 26 3 2 1.00 2 1 1 0 0 0 0
............................................................................................................CCATTTGAAATCGGT................................................................. 15 0 3 1.00 3 0 0 0 0 1 2
......................................................................................................ATAGCACCATTTGAAATCGGTT................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CATTTGAAATCGGTTAT.............................................................. 17 0 1 1.00 1 0 0 0 0 1 0
.......................................................................................................TAGCACCATTTGAAATCGGTTCT.............................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGTG........................................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0
.......................................................................................................TAGCACCATTTGAAATCGGTTATA............................................................. 24 1 2 1.00 2 2 0 0 0 0 0
........................................................................................................TGCACCATTTGAAATCGGTTA............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................AGATAGCACCATTTGAAATCGGTTA............................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTGT.............................................................. 23 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGA.................................................................. 19 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGCT................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGGA............................................................ 25 2 2 1.00 2 0 1 1 0 0 0
.......................................................................................................TAGCACCAGTTGAAATCGGTTA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTAG............................................................... 22 2 1 1.00 1 0 0 0 0 0 1
..................................................................GACCGATTTCTCTTGGTGTTA..................................................................................................... 21 2 3 0.67 2 2 0 0 0 0 0
............................................................................................................CCATTTGAAATCGGTTAA.............................................................. 18 1 6 0.67 4 1 0 0 0 2 1
.......................................................................................................TAGCACCATTTGAAATCGGTAT............................................................... 22 2 3 0.67 2 1 1 0 0 0 0
......................................................................................................CTAGCACCATGTGAAATCGGT................................................................. 21 1 2 0.50 1 0 0 0 0 0 1
.......................................................................................................TAGCACTATTTGAAATCAGTTA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCCTGGAG........................................................................................................ 19 1 2 0.50 1 0 0 1 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGTTTTT............................................................. 24 2 2 0.50 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATTTGAAATCGGAAAA.............................................................. 23 3 6 0.50 3 0 0 0 0 3 0
.......................................................................................................TAGCACCATGTGAAATCGGTTAG.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................GTGTAGCACCATCTGAAATCGGTT................................................................ 24 2 2 0.50 1 0 0 1 0 0 0
......................................................................................................CTAGCACCATGTGAAATCGGTTA............................................................... 23 1 2 0.50 1 0 0 0 1 0 0
.......................................................................................................TAGCACCATATGAACTCGGTTA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.......................................................................................................TAGCACCGTATGAAATCGGTTA............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
.......................................................................................................TAGCACTATTTGAGATCGGTT................................................................ 21 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TAGCACAATATGAAATCGGTTA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.................................................................TGACCGATTTCTCTTGGTGTTCT.................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0
..........................................................................................................TACCATTTGAAATCGGTTA............................................................... 19 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................TAGCACCACTTGAAATCGGTTT............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TAGACTAGCACCATCTGAAATCGGTTA............................................................... 27 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................GACTAGCACCATCTGAAATCGGTTA............................................................... 25 2 2 0.50 1 1 0 0 0 0 0
........................................................................................................TACACCATTTGAAATCGGTTA............................................................... 21 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATGTGAAATCGGTTAA.............................................................. 23 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTGGAATCTGTTA............................................................... 22 2 2 0.50 1 0 1 0 0 0 0
...................................................................................................GGCCTAGCACCATCTGAAATCGGTTA............................................................... 26 3 2 0.50 1 1 0 0 0 0 0
.......................................................................................................TAGCACCATGTGGAATCGGTTA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................GGTGTAGCACCATCTGAAATCGGTTA............................................................... 26 3 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TCGCACCATTTGAACGCGGTT................................................................ 21 3 2 0.50 1 0 0 0 1 0 0
.................................................................TGACCGATTTCTCTTGGTGT....................................................................................................... 20 1 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATTTCAAATCGGTTT............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.......................................................................................................TAGCCCCATATGAAATCGGTTA............................................................... 22 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGG............................................................. 24 2 2 0.50 1 0 0 1 0 0 0
.......................................................................................................TAGCATCATTTGAAATCGGTA................................................................ 21 2 2 0.50 1 0 0 1 0 0 0

Anti-sense strand reads

ACGGAGGACGTCACGGTACCACGACCTGGGGTGGCTCGGGGCGACCTGGGTAGAGAATGTGTCCGACTGGCTAAAGAGGACCACAAGTCTCAGACAAAAACAGATCGTGGTAAACTTTAGCCAATACTACATCCCCCTTTTCGTCGTCGAAGCTCCGGAGTACGGTTCAGACCAGTCGCGTCGGACAC

************************************************((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))....****************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:43 AM