ID:

ssc-mir-296

 Coordinate:

chr17:66288704-66288780 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.0 -43.0 -42.8

Sense Strand Reads

TTCGGCTGGGAGGGGCGGCAGGTACAGCCCTGTGGGCAGTGACCATGAAGGACCCTTCCGGAGGGCCCCCCCCAATCCTGTTGTGCTGGATTCAGAGGGTTGGGCGGAGGCTTTCCTGAAGGCTCTGAGGAGAGCTGCGCCCACAGGCTGTGTGGTCAGGAGGCAGGGCGTGGGGAG

*********************************************....(((.(((((.((((((((.(((((((((((.(((.........)))))))))))).)).)))))))).))))).)))......********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR1274763

ovary		 SRR066810

testes		 SRR139076

testes		 SRR1274764

testes
...............................................................................................AGGGTTGGGCGGAGGCTTTCCT............................................................ 22 0 1 1101.00 1101 631 87 239 23 77 44
...............................................................................................AGGGTTGGGCGGAGGCTTTCC............................................................. 21 0 1 314.00 314 145 57 52 19 18 23
..............................................................................................GAGGGTTGGGTGGAGGCTCTCC............................................................. 22 2 1 235.00 235 0 122 0 113 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTT........................................................... 23 1 1 108.00 108 68 6 12 0 16 6
...............................................................................................AGGGTTGGGCGGAGGCTTTC.............................................................. 20 0 1 81.00 81 52 15 2 5 6 1
...............................................................................................AGGGTTGGGCGGAGGCTTTCCC............................................................ 22 1 1 47.00 47 29 5 4 2 4 3
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTT.......................................................... 24 2 1 47.00 47 33 5 1 4 3 1
............................................................GAGGGCCCCCCCCAATCCTGT................................................................................................ 21 0 1 42.00 42 15 13 2 7 5 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTA........................................................... 23 1 1 42.00 42 36 4 1 0 0 1
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAT.......................................................... 24 2 1 39.00 39 34 2 1 1 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCA............................................................ 22 1 1 35.00 35 28 3 1 1 2 0
...............................................................................................AGGGTTGGGCGGAGGCTTT............................................................... 19 0 1 30.00 30 18 6 3 1 0 2
...............................................................................................AGGGTTGGGTGGAGGCTCTCC............................................................. 21 2 2 23.00 46 0 25 0 21 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCA............................................................. 21 1 1 22.00 22 16 2 1 0 3 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCT............................................................. 21 1 1 20.00 20 10 4 3 0 1 2
...............................................................................................AGGGTTGGGCGGAGGCTTTA.............................................................. 20 1 1 19.00 19 14 2 2 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAA.......................................................... 24 1 1 17.00 17 12 0 1 0 4 0
...............................................................................................AGGGTTGGGCGGAGGCTTTT.............................................................. 20 1 1 16.00 16 11 3 1 0 1 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCCT............................................................ 22 1 1 15.00 15 13 0 0 0 2 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTC.............................................................. 21 2 9 14.56 131 0 75 0 56 0 0
...............................................................................................AGGGTTGGGCGGAGGCTT................................................................ 18 0 1 14.00 14 13 0 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTAA............................................................. 21 2 1 13.00 13 10 1 0 0 2 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAA........................................................... 23 2 1 12.00 12 7 2 1 2 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAAA......................................................... 25 1 1 8.00 8 4 1 1 0 2 0
..............................................................................................GAGGGTTGGGTGGAGGCTTT............................................................... 20 1 1 8.00 8 0 4 0 4 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAAA.......................................................... 24 2 1 8.00 8 5 0 1 0 2 0
............................................................GAGGGCCCCCCCCAATCCTGA................................................................................................ 21 1 1 8.00 8 6 1 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTA.......................................................... 24 1 1 8.00 8 6 2 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGTTTTCCT............................................................ 22 1 1 7.00 7 7 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAT........................................................... 23 2 2 6.50 13 12 0 0 0 1 0
............................................................GAGGGCCCCCCCCAATCCTG................................................................................................. 20 0 1 6.00 6 4 0 1 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTTT......................................................... 25 3 1 6.00 6 2 3 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTGA.......................................................... 24 0 1 6.00 6 0 5 1 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTCCT............................................................ 23 2 1 5.00 5 0 1 0 4 0 0
...............................................................................................AGGGCTGGGCGGAGGCTTTCCT............................................................ 22 1 1 4.00 4 2 0 0 0 2 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTG........................................................... 23 0 1 4.00 4 3 1 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 4.00 4 4 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCA........................................................... 23 2 1 4.00 4 1 2 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGGTTTCCT............................................................ 22 1 1 4.00 4 4 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCT................................................................. 17 0 1 4.00 4 3 0 1 0 0 0
...............................................................................................TGGGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 4.00 4 3 0 0 0 1 0
............................................................GAGGGCCCCCCCCAATCCTGC................................................................................................ 21 1 1 3.00 3 2 0 0 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCG............................................................ 22 1 1 3.00 3 2 0 1 0 0 0
.............................................................AGGGCCCCCCCCAATCCTGTTG.............................................................................................. 22 0 1 3.00 3 1 2 0 0 0 0
...............................................................................................AGGGTTTGGCGGAGGCTTTCCT............................................................ 22 1 1 3.00 3 3 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTT............................................................. 21 2 1 3.00 3 3 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCTA............................................................ 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................CGGAGGGCCCCCCCCAATCCTG................................................................................................. 22 0 1 3.00 3 2 0 0 0 0 1
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAGA.......................................................... 24 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGTAGGCTTTCCT............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................GAGGGCCTCCCCCAATCCT.................................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTATA......................................................... 25 2 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCTTT........................................................... 23 2 1 2.00 2 1 0 0 0 0 1
...............................................................................................AGGGTTGGGCGGAGGCTTTTCT............................................................ 22 1 1 2.00 2 1 0 0 0 1 0
...............................................................................................AGGGTTGTGCGGAGGCTTTCA............................................................. 21 2 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGTGCGGAGGCTTTCCT............................................................ 22 1 1 2.00 2 0 0 0 0 2 0
.............................................................AGGGCCCCCCCCAATCCTGT................................................................................................ 20 0 1 2.00 2 1 0 1 0 0 0
...............................................................................................AGGGATGGGCGGAGGCTTTCCT............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCCTTCCT............................................................ 22 1 1 2.00 2 1 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTAT......................................................... 25 2 1 2.00 2 0 0 0 0 2 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTATT......................................................... 25 3 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCTT............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................GAGGGCCCCCCCCAATCCTGTA............................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
............................................................GAGGGCCCCCCCCAATCCT.................................................................................................. 19 0 1 2.00 2 1 0 0 0 1 0
............................................................GAGGGCTCCCCCCAATCCTGT................................................................................................ 21 1 1 2.00 2 1 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTAT............................................................. 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................CGGAGGGCCCCCCCCAATCCT.................................................................................................. 21 0 1 2.00 2 0 1 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTAT............................................................... 19 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTAA......................................................... 25 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................GAGGGTTGGGCGGAGGCTTTCC............................................................. 22 0 1 2.00 2 1 0 0 1 0 0
...............................................................................................AGGGTTGGGTGGAGGCTCTCCT............................................................ 22 2 1 2.00 2 0 1 0 1 0 0
...............................................................................................AGGGTTGAGCGGAGGCTTTCCT............................................................ 22 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................AGGGTTGGGCTGAGGCTTTCCT............................................................ 22 1 1 2.00 2 1 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTA............................................................. 21 2 2 2.00 4 4 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAG.......................................................... 24 2 1 2.00 2 0 1 1 0 0 0
...............................................................................................AGGGTTGGGCGGCGGCTTTCCC............................................................ 22 2 1 2.00 2 1 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAAT.......................................................... 24 3 2 2.00 4 3 1 0 0 0 0
..........................................................CGGAGGGCCCCCCCCAATCCTGT................................................................................................ 23 0 1 2.00 2 0 1 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCGAA........................................................... 23 3 1 2.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTCCT............................................................. 21 2 9 1.78 16 12 0 0 0 4 0
............................................................GAGGGCCCCCCCCAATCCTGTAA.............................................................................................. 23 2 2 1.50 3 3 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTCCTT............................................................ 22 2 3 1.33 4 4 0 0 0 0 0
................................................................................................GGGTTGGGCGGAGGCTTTCCT............................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGCCTTTCC............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTAGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTAAA........................................................ 26 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTAT............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCTTAT.......................................................... 24 3 1 1.00 1 0 0 0 0 1 0
...............................................................................................AGGGCTGGGCGGAGGCTTTC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
............................................................GACGGCCCCCCCCAATCCTGT................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCAGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTC........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................AGGGCCCCTCCCAATCCTGTT............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................GAGGGCCTCCCCCAATCCTGT................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCTAT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGCGGAGGCTTTCCT............................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCAATAA......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
............................................................GAGGGCTCCCCCCAATCCTGTTA.............................................................................................. 23 2 2 1.00 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGTCGGAGGCTTT............................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAAGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCAT............................................................ 22 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCCTAA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGATTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGTGGCTTTCCTTA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................GAAGGCTCTGAGGAGAGCTGCGCC.................................... 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTAGT............................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTGA......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTTT............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGAGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAGAA......................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTC............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTCGGGCGGAGGCTTTCCTAAT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCAA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGGGTTGGGCGGAGGCTTTCCTAT.......................................................... 24 3 1 1.00 1 0 0 0 0 1 0
............................................................GAGCGCCCCCCCCAATCCTGT................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTGC.......................................................... 24 1 1 1.00 1 0 0 1 0 0 0
............................................................AAGGGCCCCCCCCAATCCTGT................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCCTTCC............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................ATGGTTGGGCGGAGGCTTTCCTT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTCCTAT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTTGGCGGAGGCTTTC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCCTAG.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGTGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................GAGGGCCCCCCCCAATCCTGTTTTT............................................................................................ 25 2 1 1.00 1 0 0 0 0 1 0
...............................................................................................AGGGTTGGGCGCAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.....................................AGTGACCATGAAGGACCCTTCCG..................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTT................................................................ 19 1 4 1.00 4 0 1 0 3 0 0
...............................................................................................AGGGTTGGGCGGATGCTTTCCC............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCATA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTGCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGCGGAGGCTCTCC............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGGTTGTGCGGAGGCTTTC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TGGGTTGGGCGGAGGCTTTC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................AGAGGGTTGGGCGGAGGCTTTCC............................................................. 23 0 1 1.00 1 0 0 0 0 0 1
...............................................................................................AGGGTTGGGCGGAGGCTTTCG............................................................. 21 1 1 1.00 1 0 0 0 0 1 0
............................................................GAGGGCCCCCCCCAATCCTGTT............................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCATAA......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTATT............................................................ 22 2 1 1.00 1 0 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAGA......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
.................................................................................TGTGCTCGCTTCAGAGGGTTGG.......................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
................................................................................................AGGTTGGGCGGAGGCTTTCCT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGACGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTCTAT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AAGGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCGA............................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................CAGGGTTGGGCGGAGGCTTTCCTT........................................................... 24 2 1 1.00 1 0 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTAAGT........................................................ 26 3 1 1.00 1 0 0 0 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTGAT......................................................... 25 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGGGTTTGGCGGAGGCTTTCCTA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGTTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGGGTTGGGCGGAGGCTTTCCTAA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTCCC............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTCT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTCCTTT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCT........................................................... 23 2 3 1.00 3 1 0 1 0 0 1
............................................................GAGGGCCCCCCCCAATCC................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGGGTTGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTC............................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTGCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGCTGGGCGGAGGCTTTCCTA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGCGCGGAGGCTTTCCA............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTTA......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTATCCTT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGCCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GGGTTGGGCGGAGGCTTTCC............................................................. 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCC........................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGGGTCGGGCGGAGGCTTTCCT............................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGGTTGTGCGGAGGCTTTCCTAT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCTTGT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTCTCC............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTGA............................................................. 21 2 4 0.75 3 2 1 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCT................................................................. 18 1 16 0.69 11 0 6 0 5 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTCCA............................................................ 23 3 11 0.64 7 0 4 0 3 0 0
................................................................................................AGGTTTGGCGGAGGCTTTCCT............................................................ 21 2 2 0.50 1 0 0 0 0 1 0
...............................................................................................AGGGTTGGGCGGAGGGTTTCCTAT.......................................................... 24 3 2 0.50 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCAAAA.......................................................... 24 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTA............................................................... 19 1 4 0.50 2 0 0 2 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCATT.......................................................... 24 3 4 0.50 2 2 0 0 0 0 0
...............................................................................................AGGGCTGGGCGGCGGCTTTCCT............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGGGGCTTTCCA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..........................................................CGGAGGGCCCCCCCCCATCCTGA................................................................................................ 23 2 2 0.50 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGC.................................................................. 16 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCTAA........................................................... 23 3 2 0.50 1 1 0 0 0 0 0
............................................................GAGGGCCCCCCCCCATCCTGT................................................................................................ 21 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTA................................................................ 18 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGATGCTTTCCT............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
...........................................................CGAGGGCCCCCCCCAATCCTGC................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTTTT.............................................................. 21 2 5 0.40 2 0 1 0 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCAAA........................................................... 23 3 5 0.40 2 2 0 0 0 0 0
...............................................................................................AGGGTTGGGTGGAGGCTTT............................................................... 19 1 3 0.33 1 0 1 0 0 0 0
................................................................................................AGGTTGGGCGGAGGCTTT............................................................... 18 1 6 0.33 2 2 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCC............................................................. 21 1 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCAAG.......................................................... 24 3 3 0.33 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTCT............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGTGGCTTTCCT............................................................ 22 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGTAGGCTTTCCTT........................................................... 23 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTATA............................................................ 22 3 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTAG............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTCCCAT.......................................................... 24 3 3 0.33 1 1 0 0 0 0 0
............................................................GAGGGCCCCCCCCAATCCTGAA............................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGCTTGCCT............................................................ 22 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTCCTT........................................................... 24 3 3 0.33 1 0 0 0 1 0 0
...............................................................................................ATGGTTAGGCGGAGGCTTTCCTT........................................................... 23 3 4 0.25 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGCGGCTTTCC............................................................. 21 2 4 0.25 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGGGGCTTT............................................................... 19 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................CGAGGGTTGGGTGGAGGCTCTCC............................................................. 23 3 4 0.25 1 0 1 0 0 0 0
...............................................................................................AGGGTTGTGCGGAGGCTTT............................................................... 19 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................AGGGTAGGGCGGAGGCTTTCT............................................................. 21 2 5 0.20 1 1 0 0 0 0 0
...............................................................................................AGGGATGGGCGGAGGCTTTCA............................................................. 21 2 5 0.20 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTAAA............................................................ 22 3 15 0.20 3 3 0 0 0 0 0
.................................................................................................GGTTGGGCGGAGGCTTTCCTTTT......................................................... 23 3 5 0.20 1 1 0 0 0 0 0
................................................................................................GGGTTGGGCGGAGGCTTTAT............................................................. 20 2 5 0.20 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGTTTTCCTT........................................................... 23 3 5 0.20 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTTTA........................................................... 23 3 5 0.20 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTCA.............................................................. 20 2 11 0.18 2 2 0 0 0 0 0
...............................................................................................AGGGTTGTGCGGAGGCTTTCCCT........................................................... 23 3 6 0.17 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCCTCT.......................................................... 24 3 6 0.17 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTGT............................................................. 21 2 6 0.17 1 1 0 0 0 0 0
...............................................................................................AGGGGTGGGCGGAGGCTTTCCTTT.......................................................... 24 3 6 0.17 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGTTTTCCCA........................................................... 23 3 6 0.17 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTAA............................................................... 19 2 20 0.15 3 3 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTGT.............................................................. 20 2 7 0.14 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTAG.............................................................. 20 2 8 0.13 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTCTT.............................................................. 20 2 8 0.13 1 0 1 0 0 0 0
..............................................................................................GAGGGTTAGGTGGAGGCTCTCC............................................................. 22 3 10 0.10 1 0 0 0 1 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTAGAT............................................................ 22 3 10 0.10 1 1 0 0 0 0 0
............................................................GAGGGCTCCCCCCAATCCTGA................................................................................................ 21 2 10 0.10 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTCCTA............................................................ 22 3 20 0.10 2 2 0 0 0 0 0
...............................................................................................AGGGTTGTGGGGAGGCTTTCC............................................................. 21 2 12 0.08 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTCT.............................................................. 20 2 14 0.07 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTTTTAG............................................................ 22 3 14 0.07 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTAC............................................................. 22 3 17 0.06 1 0 1 0 0 0 0
............................................................GAGGGCTCCCCCCAATC.................................................................................................... 17 1 18 0.06 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTTAA............................................................. 21 3 19 0.05 1 1 0 0 0 0 0
...............................................................................................CGGGTTGGGCGGAGGCTTCCT............................................................. 21 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................GCAGGGCGTGGGGAG 15 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................GAGGGTTGGGTGGAGGCTCTCCC............................................................ 23 3 20 0.05 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCTAG............................................................... 19 2 20 0.05 1 0 1 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCA................................................................. 17 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGCGGAGGCGAT............................................................... 19 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................AGGGTTGGGTGGAGGCTCTCCA............................................................ 22 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AAGCCGACCCTCCCCGCCGTCCATGTCGGGACACCCGTCACTGGTACTTCCTGGGAAGGCCTCCCGGGGGGGGTTAGGACAACACGACCTAAGTCTCCCAACCCGCCTCCGAAAGGACTTCCGAGACTCCTCTCGACGCGGGTGTCCGACACACCAGTCCTCCGTCCCGCACCCCTC

*********************************************....(((.(((((.((((((((.(((((((((((.(((.........)))))))))))).)).)))))))).))))).)))......********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:29 AM