ID:

ssc-mir-27b

Coordinate:

chr10:31340880-31340959 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.6 -46.5 -46.4

Sense Strand Reads

CGGAAGACGCTCACCGGCCCTCTCATTATGCCCAGCCGACGACCTCTCTGACGAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGACTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGGACAGTTAAGTTGGAGCCGCTGGGGCGGAGGCCGC

********************************************(((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))))....*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR1274764

testes
SRR1274763

ovary
SRR066810

testes
SRR139075

testes
SRR139076

testes
.....................................................................................................TTCACAGTGGCTAAGTTCTGC.......................................................... 21 0 1 99456.00 99456 53196 11310 11463 17313 5683 491
.....................................................................................................TTCACAGTGGCTAAGTTCTG........................................................... 20 0 1 32358.00 32358 2089 15241 13590 634 762 42
.....................................................................................................TTCACAGTGGCTAAGTTCTGCA......................................................... 22 0 1 10154.00 10154 6593 478 611 2195 255 22
.....................................................................................................TTCACAGTGGCTAAGTTCTGCT......................................................... 22 1 1 8384.00 8384 3876 1226 1458 1802 22 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGA.......................................................... 21 1 1 8036.00 8036 5794 117 177 1465 454 29
.....................................................................................................TTCACAGTGGCTAAGTTCT............................................................ 19 0 1 6015.00 6015 751 324 175 228 4332 205
.....................................................................................................TTCACAGTGGCTAAGTTC............................................................. 18 0 2 4474.00 8948 1643 126 140 1194 5573 272
.....................................................................................................TTCACAGTGGCTAAGTTCTGT.......................................................... 21 1 1 1974.00 1974 997 228 272 372 99 6
.....................................................................................................TTCACAGTGGCTAAGTTCCGCA......................................................... 22 1 2 1573.00 3146 1685 4 9 1422 22 4
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAA........................................................ 23 1 1 1457.00 1457 846 97 106 277 118 13
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAT........................................................ 23 1 1 905.00 905 432 75 147 144 95 12
........................................................................................................ACAGTGGCTAAGTTCTGC.......................................................... 18 0 1 824.00 824 393 31 34 150 206 10
.....................................................................................................TTCACAGTGGCTAAGTT.............................................................. 17 0 2 820.00 1640 49 5 3 39 1491 53
.....................................................................................................TTCACAGTGGCTAAGTTCTGAA......................................................... 22 1 1 755.00 755 377 34 25 103 201 15
...........................................................AGAGCTTAGCTGATTGGTGAAC................................................................................................... 22 0 1 445.00 445 182 48 9 145 55 6
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAA........................................................ 23 2 1 406.00 406 236 40 22 85 20 3
......................................................................................................TCACAGTGGCTAAGTTCTGC.......................................................... 20 0 1 381.00 381 246 13 14 78 29 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAT....................................................... 24 2 1 332.00 332 220 15 15 73 9 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTT........................................................ 23 2 1 291.00 291 180 29 31 45 5 1
....................................................................................................GTTCACAGTGGCTAAGTTCTGC.......................................................... 22 0 1 259.00 259 151 7 10 80 10 1
...........................................................AGAGCTTAGCTGATTGGTGAACA.................................................................................................. 23 0 1 178.00 178 46 1 1 34 94 2
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAG........................................................ 23 1 1 160.00 160 91 19 30 15 5 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAA....................................................... 24 2 1 139.00 139 94 4 4 34 3 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCG......................................................... 22 1 1 137.00 137 89 15 20 7 4 2
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTA........................................................ 23 2 1 133.00 133 93 8 10 21 1 0
....................................................................................................CTTCACAGTGGCTAAGTTCTGC.......................................................... 22 1 1 130.00 130 82 2 0 36 9 1
........................................................................................................ACAGTGGCTAAGTTCTG........................................................... 17 0 1 117.00 117 20 26 32 7 31 1
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAT........................................................ 23 2 2 108.50 217 106 0 3 80 25 3
.....................................................................................................TTCACAGTGGCTAAGTTTTGC.......................................................... 21 1 1 102.00 102 30 2 2 5 60 3
........................................................................................................ACAGTGGCTAAGTTCT............................................................ 16 0 2 96.00 192 8 1 0 2 175 6
.....................................................................................................TTCACAGTGGCTAAGTTCTGCATT....................................................... 24 2 1 92.00 92 42 9 18 19 3 1
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAA........................................................ 23 2 2 85.50 171 79 0 1 77 11 3
.....................................................................................................TTCACAGTGGCTAAGT............................................................... 16 0 2 80.00 160 29 1 1 12 114 3
........................................................................................................ACAGTGGCTAAGTTCTGCA......................................................... 19 0 1 76.00 76 48 3 1 11 13 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAGT....................................................... 24 2 1 75.00 75 54 3 5 13 0 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTGC.......................................................... 21 1 1 75.00 75 37 11 15 4 7 1
....................................................................................................GTTCACAGTGGCTAAGTTCTG........................................................... 21 0 1 71.00 71 7 25 25 9 5 0
.....................................................................................................TCCACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 65.00 65 33 4 3 19 6 0
...........................................................AGAGCTTAGCTGATTGGTGAA.................................................................................................... 21 0 1 62.00 62 0 0 0 0 55 7
.....................................................................................................TTCATAGTGGCTAAGTTCTGC.......................................................... 21 1 1 59.00 59 35 1 0 8 14 1
......................................................................................................TCACAGTGGCTAAGTTCTGCT......................................................... 21 1 1 55.00 55 33 0 1 20 1 0
.....................................................................................................TTCACAGTGGCTAAGCTCTGC.......................................................... 21 1 1 55.00 55 30 4 1 11 9 0
........................................................................................................ACAGTGGCTAAGTTCTGCT......................................................... 19 1 1 54.00 54 34 2 3 15 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGTA......................................................... 22 1 1 53.00 53 22 7 3 4 15 2
.....................................................................................................TTCACAGTGGCTAAGTTCTTC.......................................................... 21 1 1 51.00 51 27 0 3 8 12 1
.....................................................................................................TTCACAGTGGCTAAGTTCTA........................................................... 20 1 1 51.00 51 6 5 4 2 31 3
.....................................................................................................TTCACAGTGGCTAAGTTCTGCGA........................................................ 23 2 1 51.00 51 41 2 0 6 2 0
......................................................................................................TCACAGTGGCTAAGTTCTGCA......................................................... 21 0 1 50.00 50 35 0 0 10 5 0
.....................................................................................................TTCACAGTGGTTAAGTTCTGC.......................................................... 21 1 1 49.00 49 29 0 3 7 10 0
.....................................................................................................CTCACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 48.00 48 21 3 4 9 10 1
.....................................................................................................TTTACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 48.00 48 29 1 2 6 7 3
.....................................................................................................TTCACAGTGGCTAAGTTCCGAA......................................................... 22 2 2 47.50 95 49 0 0 35 10 1
......................................................................................................TCACAGTGGCTAAGTTCTG........................................................... 19 0 1 46.00 46 6 21 16 1 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAC........................................................ 23 0 1 43.00 43 15 8 16 4 0 0
.....................................................................................................TTCACGGTGGCTAAGTTCTGC.......................................................... 21 1 1 43.00 43 20 8 2 8 4 1
.....................................................................................................TTCACAGTGGCTAAGGTCTGC.......................................................... 21 1 1 39.00 39 17 0 0 5 16 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGCC......................................................... 22 1 2 38.50 77 42 8 9 17 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGAAA........................................................ 23 3 2 38.00 76 41 1 0 29 5 0
.....................................................................................................ATCACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 37.00 37 25 0 1 9 1 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAGA....................................................... 24 2 1 36.00 36 27 2 3 4 0 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTG........................................................... 20 1 1 36.00 36 1 18 15 0 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAT........................................................ 23 2 2 35.00 70 47 1 6 14 2 0
...........................................................AGAGCTTAGCTGATTGGTGA..................................................................................................... 20 0 1 35.00 35 0 0 0 0 35 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCGT........................................................ 23 2 1 35.00 35 22 2 3 5 3 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAG........................................................ 23 2 2 34.50 69 38 0 0 31 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGTAA........................................................ 23 2 1 34.00 34 16 2 0 6 10 0
..........................................................CAGAGCTTAGCTGATTGGTGAAC................................................................................................... 23 0 1 34.00 34 14 1 1 13 3 2
.......................................................................................................CACAGTGGCTAAGTTCTGC.......................................................... 19 0 1 31.00 31 6 6 6 0 13 0
.....................................................................................................TTCACAGTGGCTAATTTCTGC.......................................................... 21 1 1 29.00 29 17 0 1 4 7 0
.....................................................................................................TTCACAGTGACTAAGTTCTGC.......................................................... 21 1 1 29.00 29 18 3 2 5 1 0
..................................................................................GTGACTGGTTTCCGCTTTG............................................................................... 19 0 1 28.00 28 0 0 0 0 26 2
.....................................................................................................TTCACAGTGGCTAAGTTCA............................................................ 19 1 4 26.25 105 37 4 5 18 40 1
.....................................................................................................TTCACAGTGGCTAAGTTCCGTA......................................................... 22 2 4 25.75 103 63 0 0 38 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTT........................................................... 20 1 3 25.33 76 3 5 4 2 59 3
.....................................................................................................TTCACAATGGCTAAGTTCTGC.......................................................... 21 1 1 25.00 25 20 1 1 3 0 0
.....................................................................................................TACACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 25.00 25 13 0 1 4 7 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCATT....................................................... 24 3 2 25.00 50 26 0 0 23 1 0
......................................................................................................TCACAGTGGCTAAGTTCTGA.......................................................... 20 1 1 25.00 25 16 0 0 7 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCATA....................................................... 24 2 1 25.00 25 11 2 3 5 3 1
......................................................................................................TCACAGTGGCTAAGTTCT............................................................ 18 0 1 24.00 24 0 1 0 0 23 0
.....................................................................................................TTCACAGTGGCTAAGTCCTGC.......................................................... 21 1 1 24.00 24 13 1 1 6 3 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGG.......................................................... 21 1 1 24.00 24 17 1 2 3 1 0
.....................................................................................................TTCACAGTAGCTAAGTTCTGC.......................................................... 21 1 1 24.00 24 19 0 0 5 0 0
........................................................................................................ACAGTGGCTAAGTTC............................................................. 15 0 6 23.50 141 10 0 1 5 119 6
.........................................................................................................CAGTGGCTAAGTTCTG........................................................... 16 0 5 23.40 117 1 76 40 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAG........................................................ 23 2 1 23.00 23 15 1 2 3 2 0
.....................................................................................................TTCACAGTGGCTAAATTCTGC.......................................................... 21 1 1 22.00 22 12 1 3 5 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAATT...................................................... 25 2 1 22.00 22 13 3 3 0 3 0
..........................................................CAGAGCTTAGCTGATTGGTGAACA.................................................................................................. 24 0 1 22.00 22 9 0 0 9 3 1
......................................................................................................TCACAGTGGCTAAGTTCTGCTT........................................................ 22 2 1 22.00 22 12 1 3 6 0 0
....................................................................................................GTTCACAGTGGCTAAGTTCTGT.......................................................... 22 1 1 21.00 21 9 1 2 9 0 0
......................................................................................................TCACAGTGGCTAAGTTCTGCAT........................................................ 22 1 1 20.00 20 11 0 1 2 6 0
......................................................................................................TCACAGTGGCTAAGTTC............................................................. 17 0 2 20.00 40 3 0 0 4 30 3
...........................................................................................................GTGGCTAAGTTCTGC.......................................................... 15 0 3 19.67 59 4 38 16 1 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGAAC........................................................ 23 2 2 19.50 39 18 0 1 17 3 0
.....................................................................................................TTCACAGTGGCTCAGTTCTGC.......................................................... 21 1 1 19.00 19 3 0 1 1 14 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCACT....................................................... 24 1 1 19.00 19 8 6 3 2 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAT......................................................... 22 2 3 18.67 56 33 3 6 8 6 0
.....................................................................................................TTCACAGGGGCTAAGTTCTGC.......................................................... 21 1 1 18.00 18 3 0 0 3 12 0
.....................................................................................................TTCACAGTGGCTAAGTTCTCC.......................................................... 21 1 1 18.00 18 10 0 0 5 3 0
....................................................................................................CTTCACAGTGGCTAAGTTCTG........................................................... 21 1 1 18.00 18 4 5 6 1 1 1
........................................................................................................ACAGTGGCTAAGTTCTGCAT........................................................ 20 1 1 18.00 18 5 0 0 1 12 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGTT......................................................... 22 2 4 17.50 70 29 1 4 16 19 1
.....................................................................................................TTCACAGTGGCTAAGTTCTAC.......................................................... 21 1 1 17.00 17 13 1 0 3 0 0
..................................................................................................ATTTTCACAGTGGCTAAGTTCTGC.......................................................... 24 2 1 17.00 17 12 0 0 5 0 0
.....................................................................................................TTCATAGTGGCTAAGTTCT............................................................ 19 1 1 17.00 17 1 0 0 0 12 4
....................................................................................................CTTCACAGTGGCTAAGTTCTGCA......................................................... 23 1 1 16.00 16 12 0 1 3 0 0
.....................................................................................................TTCACATTGGCTAAGTTCTGC.......................................................... 21 1 1 16.00 16 6 2 1 3 3 1
.....................................................................................................TTCACAGTGCCTAAGTTCTGC.......................................................... 21 1 1 16.00 16 9 2 1 2 2 0
.....................................................................................................TTCACAGCGGCTAAGTTCTGC.......................................................... 21 1 3 16.00 48 29 2 3 6 7 1
.....................................................................................................TTCACAGAGGCTAAGTTCTGC.......................................................... 21 1 1 16.00 16 7 0 1 5 2 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGGA......................................................... 22 1 1 15.00 15 8 1 3 3 0 0
.....................................................................................................TTCACAGTGGCTGAGTTCTGC.......................................................... 21 1 2 14.50 29 23 0 1 5 0 0
.....................................................................................................TTCACAGTGGCCAAGTTCTGC.......................................................... 21 1 2 14.50 29 16 2 0 8 2 1
.....................................................................................................TTCACAGTGGCTAAGATCTGC.......................................................... 21 1 1 14.00 14 9 0 0 4 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAAA...................................................... 25 3 1 13.00 13 9 0 2 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAG....................................................... 24 2 1 13.00 13 8 1 2 2 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTC........................................................... 20 1 1 13.00 13 4 3 2 1 3 0
.....................................................................................................TTCACAGTGGGTAAGTTCTGC.......................................................... 21 1 1 13.00 13 6 2 0 5 0 0
.....................................................................................................TTTACAGTGGCTAAGTTCTGCA......................................................... 22 1 1 12.00 12 8 0 0 2 1 1
.....................................................................................................TTCACAGTGGCTTAGTTCTGC.......................................................... 21 1 1 12.00 12 8 0 1 1 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAAT...................................................... 25 2 1 12.00 12 5 3 1 3 0 0
....................................................................................................GTTCACAGTGGCTAAGTTCTGCA......................................................... 23 0 1 12.00 12 5 2 2 1 2 0
......................................................................................................TTACAGTGGCTAAGTTCTGC.......................................................... 20 1 1 11.00 11 3 1 0 3 4 0
.....................................................................................................TTCACAGTGTCTAAGTTCTGC.......................................................... 21 1 1 11.00 11 5 0 0 0 6 0
.....................................................................................................TTCACAGTGGTTAAGTTCTG........................................................... 20 1 2 11.00 22 3 10 5 0 3 1
.....................................................................................................TTCTCAGTGGCTAAGTTCTGC.......................................................... 21 1 1 11.00 11 8 0 0 3 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCATTT...................................................... 25 2 1 11.00 11 6 1 0 3 1 0
....................................................................................................GTTCACAGTGGCTAAGTTCTGA.......................................................... 22 1 1 11.00 11 6 1 0 3 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAGA....................................................... 24 3 2 10.50 21 11 0 0 10 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCAGC.......................................................... 21 1 2 10.50 21 12 0 0 5 4 0
.....................................................................................................TTCCCAGTGGCTAAGTTCTGC.......................................................... 21 1 1 10.00 10 1 1 0 1 7 0
....................................................................................................CTTCACAGTGGCTAAGTTCTGCT......................................................... 23 2 1 10.00 10 9 0 1 0 0 0
.....................................................................................................TCCACAGTGGCTAAGTTCTGCA......................................................... 22 1 1 10.00 10 10 0 0 0 0 0
...........................................................AGAGCTTAGCTGATTGGTGAACT.................................................................................................. 23 1 1 10.00 10 2 1 3 3 0 1
.......................................................................................................CACAGTGGCTAAGTTCTG........................................................... 18 0 1 10.00 10 0 6 3 0 1 0
.....................................................................................................TTCACAGTGGCTAGGTTCTGC.......................................................... 21 1 1 10.00 10 7 0 0 2 1 0
.....................................................................................................TTCACAGTGGCTACGTTCTGC.......................................................... 21 1 1 10.00 10 0 0 0 1 8 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTTT....................................................... 24 3 3 10.00 30 19 1 1 8 0 1
.....................................................................................................TTCGCAGTGGCTAAGTTCT............................................................ 19 1 1 9.00 9 0 1 0 0 8 0
.....................................................................................................TTCACAGTGGCTAAGCTCTG........................................................... 20 1 1 9.00 9 0 5 3 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTG........................................................ 23 2 1 9.00 9 5 1 3 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTAT....................................................... 24 3 1 9.00 9 8 0 0 1 0 0
.....................................................................................................TTGACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 9.00 9 3 0 0 2 4 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTGA.......................................................... 21 2 1 9.00 9 6 0 0 3 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAAT....................................................... 24 3 2 9.00 18 11 0 0 7 0 0
.....................................................................................................TTCACGGTGGCTAAGTTCTG........................................................... 20 1 1 8.00 8 3 1 3 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAC........................................................ 23 1 1 8.00 8 6 1 0 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTATGC.......................................................... 21 1 1 8.00 8 5 0 0 0 3 0
.....................................................................................................TTCACAGTGGCTAAGTTTTG........................................................... 20 1 3 8.00 24 2 2 0 0 19 1
....................................................................................................GTTCACAGTGGCTAAGTTCTGCT......................................................... 23 1 1 8.00 8 1 0 2 5 0 0
..................................................................................................TTATTCACAGTGGCTAAGTTCTGC.......................................................... 24 1 1 8.00 8 7 0 0 1 0 0
.....................................................................................................TTCACGGTGGCTAAGTTCT............................................................ 19 1 1 8.00 8 0 0 0 0 7 1
.....................................................................................................TTCACAGTGGCTACGTTCTG........................................................... 20 1 1 8.00 8 0 1 5 0 2 0
.....................................................................................................TTCACGGTGGCTAAGTTCTGCA......................................................... 22 1 1 8.00 8 2 1 0 5 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGTAA........................................................ 23 3 4 8.00 32 14 0 0 17 1 0
......................................................................................................TCACAGTGGCTAAGTTCTGCAA........................................................ 22 1 1 8.00 8 4 0 0 3 1 0
.....................................................................................................TTCGCAGTGGCTAAGTTC............................................................. 18 1 2 8.00 16 0 0 0 0 16 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGAAT........................................................ 23 3 6 7.67 46 23 1 3 17 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAG......................................................... 22 2 2 7.50 15 10 0 0 3 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGGA......................................................... 22 2 2 7.50 15 8 0 0 4 3 0
.....................................................................................................TTCACAGTGGCTAAGTTA............................................................. 18 1 5 7.40 37 13 0 1 6 17 0
.....................................................................................................TTCACAGTGGCTAAGTTTT............................................................ 19 1 3 7.33 22 0 0 0 0 20 2
.....................................................................................................TTCACAGTGGCTAAGTTCTTA.......................................................... 21 2 4 7.25 29 7 0 0 2 20 0
............................................................GAGCTTAGCTGATTGGTGAACA.................................................................................................. 22 0 1 7.00 7 1 0 0 1 5 0
.....................................................................................................TTCACCGTGGCTAAGTTCTGC.......................................................... 21 1 1 7.00 7 0 2 0 0 5 0
....................................................................................................GTTCACAGTGGCTAAGTTCT............................................................ 20 0 1 7.00 7 0 0 0 3 4 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTGCA......................................................... 22 1 1 7.00 7 3 2 1 1 0 0
.....................................................................................................TTCAAAGTGGCTAAGTTCTGC.......................................................... 21 1 1 7.00 7 3 2 0 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTCT.......................................................... 21 2 3 7.00 21 10 0 0 11 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAGT....................................................... 24 3 1 7.00 7 5 0 1 1 0 0
........................................................................................................ACAGTGGCTAAGTTCTGCAA........................................................ 20 1 2 7.00 14 5 0 0 1 8 0
.....................................................................................................TTCACAGTGGCTACGTTCT............................................................ 19 1 1 7.00 7 0 0 0 0 7 0
.....................................................................................................TTCATAGTGGCTAAGTTCTGCT......................................................... 22 2 1 7.00 7 3 1 0 3 0 0
........................................................................................................ACAGTGGCTAAGTTCCGCA......................................................... 19 1 2 6.50 13 9 0 0 4 0 0
....................................................................................................CTTCACAGTGGCTAAGTTC............................................................. 19 1 2 6.50 13 2 0 0 1 10 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAGT....................................................... 24 3 2 6.50 13 6 0 0 7 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCATTTT..................................................... 26 3 1 6.00 6 3 1 0 2 0 0
.....................................................................................................TTCACCGTGGCTAAGTTCTG........................................................... 20 1 1 6.00 6 0 3 3 0 0 0
.....................................................................................................TTCATAGTGGCTAAGTTCTG........................................................... 20 1 1 6.00 6 1 0 2 0 3 0
....................................................................................................CTTCACAGTGGCTAAGTTCTGA.......................................................... 22 2 2 6.00 12 11 0 0 1 0 0
.....................................................................................................TTCACACTGGCTAAGTTCTG........................................................... 20 1 1 6.00 6 1 2 3 0 0 0
.....................................................................................................TTCACAATGGCTAAGTTCTGCA......................................................... 22 1 1 6.00 6 5 0 0 0 1 0
.....................................................................................................GTCACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 6.00 6 3 1 0 0 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCCT........................................................ 23 2 2 6.00 12 3 6 3 0 0 0
.....................................................................................................TTCACAGTCGCTAAGTTCTGC.......................................................... 21 1 1 6.00 6 3 0 0 3 0 0
.....................................................................................................TCCACAGTGGCTAAGTTCTGCT......................................................... 22 2 1 6.00 6 5 0 0 1 0 0
.....................................................................................................CTCACAGTGGCTAAGTTCTG........................................................... 20 1 1 6.00 6 0 1 3 2 0 0
.....................................................................................................TTCACAGTGGCTAAGCTCTGCA......................................................... 22 1 1 6.00 6 3 0 0 1 2 0
......................................................................................................TCACAGTGGCTAAGTTCTGT.......................................................... 20 1 1 6.00 6 1 0 0 2 2 1
.....................................................................................................TTCACAGTGGCTAAGTTCGG........................................................... 20 1 2 6.00 12 0 7 3 2 0 0
.....................................................................................................TTCACAGGGGCTAAGTTCTG........................................................... 20 1 1 6.00 6 0 0 1 0 5 0
.....................................................................................................TTCACGGTGGCTAAGTTCTGCT......................................................... 22 2 1 6.00 6 5 0 0 1 0 0
.....................................................................................................TTCACTGTGGCTAAGTTCTGC.......................................................... 21 1 1 6.00 6 4 0 0 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTACTGC.......................................................... 21 1 1 6.00 6 3 0 1 2 0 0
.....................................................................................................TTCACAGTGGCTAACTTCTG........................................................... 20 1 1 6.00 6 0 3 2 0 1 0
.....................................................................................................TTCATAGTGGCTAAGTTC............................................................. 18 1 3 5.67 17 0 0 0 2 15 0
..................................................................................................TTATTCACAGTGGCTAAGTTCCG........................................................... 23 2 2 5.50 11 9 0 0 2 0 0
........................................................................................................ACAGTGGCTAAGTTCTGT.......................................................... 18 1 4 5.25 21 10 0 2 3 6 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAGTT...................................................... 25 2 1 5.00 5 3 0 1 1 0 0
.....................................................................................................TTCACAGTGGCTATGTTCTGC.......................................................... 21 1 1 5.00 5 3 0 0 0 2 0
.....................................................................................................TTCACAGCGGCTAAGTTCTGCA......................................................... 22 1 1 5.00 5 4 0 0 1 0 0
..................................................................................................ATTTTCACAGTGGCTAAGTTCTGCA......................................................... 25 2 1 5.00 5 2 0 0 3 0 0
.....................................................................................................CTCACAGTGGCTAAGTTCTGCA......................................................... 22 1 1 5.00 5 2 1 0 2 0 0
.....................................................................................................TTTACAGTGGCTAAGTTC............................................................. 18 1 3 5.00 15 0 0 0 0 14 1
....................................................................................................GTTCACAGTGGCTAAGTTCTGAA......................................................... 23 1 1 5.00 5 1 0 1 1 2 0
.....................................................................................................TTCACAGTGGATAAGTTCTGC.......................................................... 21 1 1 5.00 5 3 0 0 0 2 0
...........................................................AGAGCTTAGCTGATTGGTGAACAG................................................................................................. 24 0 1 5.00 5 2 0 0 0 3 0
......................................................................................................TCACAGTGGCTAAGTTCCGCA......................................................... 21 1 2 5.00 10 6 0 0 4 0 0
.....................................................................................................TTCACAGTGGTTAAGTTCTGCA......................................................... 22 1 1 5.00 5 4 0 0 1 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAC....................................................... 24 1 1 5.00 5 2 0 1 2 0 0
......................................................................................................TCACAGTGGCTAAGTTCTGAA......................................................... 21 1 1 5.00 5 1 0 0 2 2 0
.....................................................................................................TTCACAGTGGCTGAGTTCTGCA......................................................... 22 1 1 5.00 5 4 0 0 1 0 0
......................................................................................................TCACAGTGGCTAAGTTCTGCG......................................................... 21 1 1 5.00 5 3 1 0 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAC........................................................ 23 1 2 5.00 10 6 0 0 4 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCGGC....................................................... 24 2 1 5.00 5 0 0 0 0 5 0
..........................................................................................................AGTGGCTAAGTTCTGC.......................................................... 16 0 1 5.00 5 1 3 1 0 0 0
....................................................................................................GTTCACAGTGGCTAAGTTC............................................................. 19 0 2 5.00 10 0 0 0 1 8 1
........................................................................................................ACAGTGGCTAAGTTCTGA.......................................................... 18 1 17 4.82 82 57 0 2 12 11 0
.....................................................................................................TTCACAGTGGCTAAGTTCTAT.......................................................... 21 2 3 4.67 14 4 0 1 2 7 0
.....................................................................................................TTTACAGTGGCTAAGTTCT............................................................ 19 1 2 4.50 9 0 0 0 0 9 0
......................................................................................................TCACAGTGGCTAAGTT.............................................................. 16 0 2 4.50 9 0 0 0 0 9 0
.....................................................................................................TTCACAGTGGTTAAGTTCT............................................................ 19 1 4 4.25 17 0 0 0 0 14 3
.....................................................................................................TTCACAGTGGCTAAGTTTTGCAT........................................................ 23 2 1 4.00 4 0 0 0 0 4 0
...........................................................AGAGCTTAGCTGATTGGTGAACAGT................................................................................................ 25 0 1 4.00 4 1 0 0 0 3 0
.....................................................................................................TTCACAGTGGCTAAGCTCT............................................................ 19 1 1 4.00 4 0 0 0 0 4 0
.....................................................................................................CTCACAGTGGCTAAGTTCT............................................................ 19 1 1 4.00 4 0 0 0 0 4 0
.....................................................................................................TTCACAGTGGCTAATTTCTG........................................................... 20 1 1 4.00 4 2 1 0 0 1 0
..........................................................CAGAGCTTAGCTGATTGGTGA..................................................................................................... 21 0 1 4.00 4 1 0 0 0 2 1
.....................................................................................................TTCACAGTGGCTAACTTCTGC.......................................................... 21 1 1 4.00 4 2 0 2 0 0 0
.........................................................................................................CAGTGGCTAAGTTCTGC.......................................................... 17 0 1 4.00 4 1 1 2 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTTA....................................................... 24 3 1 4.00 4 3 0 0 1 0 0
.....................................................................................................TTCACAGTGACTAAGTTCTG........................................................... 20 1 1 4.00 4 0 1 1 1 1 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTGCT......................................................... 22 2 1 4.00 4 2 1 0 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTTTGCA......................................................... 22 1 1 4.00 4 2 0 0 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTAAA......................................................... 22 2 1 4.00 4 1 0 1 0 2 0
.....................................................................................................TTCAGAGTGGCTAAGTTCTGC.......................................................... 21 1 1 4.00 4 3 0 1 0 0 0
............................................................GAGCTTAGCTGATTGGTGAAC................................................................................................... 21 0 1 4.00 4 2 0 0 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTTT............................................................. 18 1 7 4.00 28 3 1 0 0 23 1
.....................................................................................................TTCACAGTGGCTAAGTTCTACA......................................................... 22 1 1 4.00 4 3 0 0 1 0 0
.....................................................................................................TTCACAGTGGCTACGTTC............................................................. 18 1 3 3.67 11 0 0 0 0 11 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGGAT........................................................ 23 3 5 3.60 18 11 0 0 7 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGCAAA....................................................... 24 3 4 3.50 14 6 0 0 8 0 0
.......................................................................................................CACAGTGGCTAAGTTC............................................................. 16 0 2 3.50 7 0 0 0 0 7 0
.....................................................................................................CTCACAGTGGCTAAGTTCTGCT......................................................... 22 2 2 3.50 7 3 0 0 4 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCGGC.......................................................... 21 1 2 3.50 7 2 0 0 3 2 0
.....................................................................................................TTCACAGCGGCTAAGTTCTG........................................................... 20 1 3 3.33 10 0 5 5 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGTAG........................................................ 23 3 4 3.25 13 9 0 0 4 0 0
.....................................................................................................TTCACAGTGGCTAAGGTCTG........................................................... 20 1 1 3.00 3 1 0 0 0 2 0
......................................................................................................TCACAGTGGCTAAGTTCTGCAAT....................................................... 23 2 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTATGCA......................................................... 22 1 1 3.00 3 1 0 0 1 1 0
.....................................................................................................TTCGCAGTGGCTAAGTTCTGAA......................................................... 22 2 1 3.00 3 2 0 0 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTTCA......................................................... 22 1 1 3.00 3 1 0 0 0 2 0
.....................................................................................................TTCACAGTGGCAAAGTTCTG........................................................... 20 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................ATTCACAGTGGCTAAGTTCT............................................................ 20 1 1 3.00 3 0 0 0 0 3 0
.....................................................................................................TTCACAGTCGCTAAGTTCTGCA......................................................... 22 1 1 3.00 3 0 0 1 0 2 0
.....................................................................................................TTCACATTGGCTAAGTTCTG........................................................... 20 1 1 3.00 3 0 0 0 0 3 0
.......................................................................................................CACAGTGGCTAAGTTCT............................................................ 17 0 1 3.00 3 0 0 0 0 3 0
........................................................ATTAGAGCTTAGCTGATTGGTGAAC................................................................................................... 25 3 1 3.00 3 0 0 0 3 0 0
.....................................................................................................TGCACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 3.00 3 1 0 1 1 0 0
.....................................................................................................TTCACAGTGGCTAAGTCCTGCA......................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTC........................................................ 23 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCCATT...................................................... 25 3 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTAACAGTGGCTAAGTTCTGC.......................................................... 21 1 1 3.00 3 1 1 0 1 0 0
.....................................................................................................TTCATAGTGGCTAAGTTCTGCA......................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TCCACAGTGGCTAAGTTCTG........................................................... 20 1 2 3.00 6 0 4 1 0 1 0
.....................................................................................................ATCACAGTGGCTAAGTTCTG........................................................... 20 1 1 3.00 3 1 1 1 0 0 0
......................................................................................................TTACAGTGGCTAAGTTCTGCA......................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTCACAGTTGCTAAGTTCTGC.......................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTATT...................................................... 25 3 1 3.00 3 1 2 0 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTGTGCA......................................................... 22 1 1 3.00 3 2 0 0 0 1 0
.....................................................................................................TTCACAGTGGCGAAGTTCTGC.......................................................... 21 1 1 3.00 3 1 0 0 1 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGTAG........................................................ 23 2 1 3.00 3 1 0 0 2 0 0
.....................................................................................................TTCACAGTGGCTAATTTCTGCA......................................................... 22 1 1 3.00 3 2 0 0 1 0 0
.....................................................................................................TTCACAGTGGCTAGGTTCTGCA......................................................... 22 1 1 3.00 3 1 1 0 1 0 0
....................................................................................................CTTCACAGTGGCTAAGTTCT............................................................ 20 1 1 3.00 3 1 0 0 0 2 0
.....................................................................................................TTCACAGTGGCTAAGTTCAGCA......................................................... 22 1 1 3.00 3 2 0 0 1 0 0
.....................................................................................................TTCACAGTGGCTAAGATCTGCA......................................................... 22 1 1 3.00 3 2 1 0 0 0 0
...........................................................AGAGCTTAGCTGATTGGTGAACAT................................................................................................. 24 1 1 3.00 3 0 0 0 0 3 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAATA...................................................... 25 3 1 3.00 3 2 0 0 1 0 0
..........................................................CAGAGCTTAGCTGATTGGTGAA.................................................................................................... 22 0 1 3.00 3 2 0 0 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCTTTT...................................................... 25 3 2 3.00 6 5 0 0 1 0 0
.....................................................................................................TCCACAGTGGCTAAGTTCT............................................................ 19 1 2 3.00 6 0 0 0 0 6 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAC......................................................... 22 2 2 3.00 6 4 0 1 0 1 0
.....................................................................................................TTCACAGTGGCTAAGTTCTAA.......................................................... 21 2 5 2.80 14 5 0 0 0 8 1
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAAA....................................................... 24 3 7 2.71 19 13 0 1 5 0 0
.....................................................................................................TTCACAGTGGCTAAG................................................................ 15 0 7 2.57 18 5 1 3 1 8 0
.....................................................................................................TTCACAGTGGCTAAGTCCTG........................................................... 20 1 2 2.50 5 0 3 2 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCCGAAG........................................................ 23 3 3 2.33 7 6 0 0 1 0 0
.....................................................................................................TTCACGGTGGCTAAGTTC............................................................. 18 1 3 2.33 7 0 0 0 1 6 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAAAT....................................................... 24 3 3 2.33 7 4 0 0 2 1 0
.....................................................................................................TTCACAGTGGCTCAGTTCT............................................................ 19 1 4 2.25 9 0 0 0 0 9 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGAGA........................................................ 23 3 10 2.20 22 11 1 1 9 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGATA........................................................ 23 3 6 2.17 13 9 1 1 1 1 0
...................................................................................................CGTTCACAGTGGCTAAGTTCTGC.......................................................... 23 1 1 2.00 2 1 0 0 1 0 0
.....................................................................................................TACACAGTGGCTAAGTTCTGCT......................................................... 22 2 1 2.00 2 1 0 1 0 0 0
.....................................................................................................TTCACAGTGGCTAAGTTCTGCAAGA...................................................... 25 3 1 2.00 2 1 0 0 1 0 0
.....................................................................................................TACACAGTGGCTAAGTTCTG........................................................... 20 1 1 2.00 2 1 0 1 0 0 0
.....................................................................................................TTCACAGTGGCTAACTTCTGCT......................................................... 22 2 1 2.00 2 1 0 0 1 0 0
.....................................................................................................TTCACAGAGGCTAAGTTCTG........................................................... 20 1 1 2.00 2 0 1 0 0 1 0
.....................................................................................................TTCACAGTGGCAAAGTTCTGC.......................................................... 21 1 1 2.00 2 0 0 0 1 1 0

Anti-sense strand reads

GCCTTCTGCGAGTGGCCGGGAGAGTAATACGGGTCGGCTGCTGGAGAGACTGCTCCACGTCTCGAATCGACTAACCACTTGTCACTGACCAAAGGCGAAACAAGTGTCACCGATTCAAGACGTGGACTTCTCTTCCACTCTACCCCTGTCAATTCAACCTCGGCGACCCCGCCTCCGGCG

*******************************************(((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))))....********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:22 AM