ID:

ssc-mir-24-2

 Coordinate:

chr10:31340334-31340413 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.1 -29.0 -28.1
mature

  1. ssc-mir-24-2  chr10:31340341-31340362 -
  2. ssc-mir-24-1  chr2:65582223-65582244 +
star

Sense Strand Reads

GGGCCGCGCCAGCTCCCAGCGGAGGCACTGCTTCTCCGGGCTGTCGATTGGACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTTACACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGCCCTCGAGCAAAGCCTTCCTGCTTGTAAGTGCCCAGAGGCTCGGGAGCT

************************************************.((...((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))...))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR139075

testes		 SRR1274764

testes		 SRR1274763

ovary		 SRR139076

testes
.....................................................................................................TGGCTCAGTTCAGCAGGAACAG......................................................... 22 0 2 135238.00 270476 140489 126974 2530 83 201 199
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGT........................................................ 23 1 2 70284.00 140568 70250 63857 5279 241 564 377
.....................................................................................................TGGCTCAGTTCAGCAGGAAC........................................................... 20 0 2 46768.00 93536 46587 44081 562 1425 804 77
.....................................................................................................TGGCTCAGTTCAGCAGGAACA.......................................................... 21 0 2 10114.50 20229 10705 8831 383 137 134 39
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGA........................................................ 23 1 2 9318.50 18637 12395 6004 84 60 87 7
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTT....................................................... 24 2 2 6314.50 12629 6312 5886 388 10 13 20
......................................................................................................GGCTCAGTTCAGCAGGAACAGT........................................................ 22 1 2 2485.00 4970 2274 2490 196 0 2 8
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTA....................................................... 24 1 2 2413.50 4827 2493 2092 228 0 8 6
.....................................................................................................TGGCTCAGTTCAGCAGGAA............................................................ 19 0 2 1753.50 3507 1852 1531 89 9 17 9
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGC........................................................ 23 1 2 1363.50 2727 1393 1310 18 1 3 2
......................................................................................................GGCTCAGTTCAGCAGGAACAG......................................................... 21 0 2 1294.00 2588 1258 1238 85 0 1 6
.....................................................................................................TGGCTCAGTTCAGCAGGAAA........................................................... 20 1 2 1011.00 2022 1020 837 94 26 18 27
.....................................................................................................TGGCTCAGTTCAGCAGGA............................................................. 18 0 2 991.00 1982 1070 865 39 4 3 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACAC......................................................... 22 1 2 549.50 1099 514 561 21 0 1 2
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGG........................................................ 23 0 2 526.50 1053 724 296 20 4 7 2
....................................................................................................ATGGCTCAGTTCAGCAGGAACAG......................................................... 23 1 2 478.50 957 466 489 2 0 0 0
....................................................................................................CTGGCTCAGTTCAGCAGGAACAG......................................................... 23 0 2 462.50 925 509 379 30 2 0 5
......................................................................................................GGCTCAGTTCAGCAGGAAC........................................................... 19 0 2 347.50 695 337 338 16 3 1 0
....................................................................................................CTGGCTCAGTTCAGCAGGAAC........................................................... 21 0 2 307.50 615 356 192 4 26 34 3
.....................................................................................................TGGCTCAGTTCAGCAGGAACAA......................................................... 22 1 2 221.50 443 165 132 128 1 2 15
.....................................................................................................TGGCTCAGTTCAGCAGGAACACT........................................................ 23 2 2 217.00 434 192 202 22 6 11 1
....................................................................................................ATGGCTCAGTTCAGCAGGAACAGT........................................................ 24 2 2 215.00 430 212 215 2 0 0 1
....................................................................................................CTGGCTCAGTTCAGCAGGA............................................................. 19 0 2 189.00 378 240 136 2 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGTT....................................................... 22 2 2 182.00 364 179 166 18 0 0 1
......................................................................................................GGCTCAGTTCAGCAGGAACAGTT....................................................... 23 2 2 164.50 329 140 172 16 0 0 1
....................................................................................................CTGGCTCAGTTCAGCAGGAACAGT........................................................ 24 1 2 141.00 282 147 119 11 1 2 2
.....................................................................................................TGACTCAGTTCAGCAGGAACAG......................................................... 22 1 2 134.50 269 126 140 3 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAT......................................................... 22 1 2 130.00 260 120 113 24 0 2 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACT.......................................................... 21 1 2 128.50 257 110 106 4 32 2 3
.....................................................................................................TGGCTCAGTTCAGCAGG.............................................................. 17 0 3 125.00 375 240 126 9 0 0 0
.....................................................................................................TGGCTCAGTTTAGCAGGAACAG......................................................... 22 1 2 112.00 224 140 83 1 0 0 0
....................................................................................................ATGGCTCAGTTCAGCAGGAAC........................................................... 21 1 2 99.50 199 87 112 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTAT...................................................... 25 2 2 95.50 191 105 75 10 0 1 0
.....................................................................................................TGGCTTAGTTCAGCAGGAACAG......................................................... 22 1 2 90.00 180 93 77 9 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAT............................................................ 19 1 3 90.00 270 124 118 3 12 13 0
.....................................................................................................CGGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 86.00 172 100 71 1 0 0 0
.....................................................................................................TAGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 83.00 166 84 77 5 0 0 0
...............................................................GTGCCTACTGAGCTGATATCAGT.............................................................................................. 23 0 1 78.00 78 42 29 3 3 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAAT........................................................... 20 1 5 78.00 390 202 147 18 13 6 4
.....................................................................................................TGGCTCAGTTCAGCAGGAACACA........................................................ 23 2 2 74.50 149 71 65 13 0 0 0
......................................................................................................GGCTCAGTTCAGCAGGAACA.......................................................... 20 0 2 72.00 144 64 69 11 0 0 0
.....................................................................................................TGGCTCAGTTCGGCAGGAACAG......................................................... 22 1 2 71.00 142 81 60 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGAA....................................................... 24 1 2 70.50 141 88 46 1 0 5 1
.......................................................................................................GCTCAGTTCAGCAGGAACAGT........................................................ 21 1 2 67.50 135 49 54 30 1 0 1
......................................................................................................GGCTCAGTTCAGCAGGAACAGTA....................................................... 23 1 2 66.50 133 69 53 11 0 0 0
....................................................................................................CTGGCTCAGTTCAGCAGGAACA.......................................................... 22 0 2 65.50 131 82 36 8 0 3 2
.....................................................................................................TGGCTCAGCTCAGCAGGAACAG......................................................... 22 1 2 64.00 128 62 62 4 0 0 0
.....................................................................................................TGGCTCGGTTCAGCAGGAACAG......................................................... 22 1 2 62.00 124 63 60 1 0 0 0
.....................................................................................................TGGCTCAGTTTAGCAGGAACAGT........................................................ 23 2 2 61.50 123 72 44 6 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGAT....................................................... 24 2 2 61.00 122 68 45 5 2 2 0
......................................................................................................GGCTCAGTTCAGCAGGAACAGA........................................................ 22 1 2 58.50 117 63 40 11 0 0 3
.....................................................................................................CGGCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 58.00 116 53 56 7 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTTT...................................................... 25 3 2 57.00 114 58 45 9 0 0 2
.....................................................................................................TGGCTCAGTTCAGCAGGAACGG......................................................... 22 1 2 57.00 114 74 34 5 1 0 0
.....................................................................................................TGGTTCAGTTCAGCAGGAACAG......................................................... 22 1 2 54.00 108 63 42 3 0 0 0
.....................................................................................................TGGCTCAGTTCAGTAGGAACAG......................................................... 22 1 2 53.00 106 60 37 7 1 0 1
.....................................................................................................TGGCTTAGTTCAGCAGGAACAGT........................................................ 23 2 2 53.00 106 54 38 13 0 0 1
.....................................................................................................TGGCTCAGTCCAGCAGGAACAG......................................................... 22 1 2 51.00 102 59 42 0 0 0 1
.....................................................................................................TGGCTCAGTTCAGCGGGAACAG......................................................... 22 1 2 50.00 100 54 46 0 0 0 0
.....................................................................................................TAGCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 49.00 98 44 45 9 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAAA.......................................................... 21 1 2 49.00 98 49 29 13 3 2 2
.....................................................................................................TGGCTCAGTTCAGCAGGAATAG......................................................... 22 1 2 47.50 95 46 44 5 0 0 0
.....................................................................................................TGGCCCAGTTCAGCAGGAACAG......................................................... 22 1 2 47.50 95 51 44 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGAAACAG......................................................... 22 1 2 46.50 93 58 33 2 0 0 0
.....................................................................................................AGGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 46.00 92 49 42 1 0 0 0
.....................................................................................................TGGCTCCGTTCAGCAGGAACAG......................................................... 22 1 2 45.50 91 50 35 5 0 0 1
....................................................................................................ATGGCTCAGTTCAGCAGGAACA.......................................................... 22 1 2 43.50 87 38 49 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAG........................................................... 20 1 3 43.33 130 71 34 10 7 8 0
...............................................................GTGCCTACTGAGCTGATATCA................................................................................................ 21 0 1 43.00 43 0 2 35 0 1 5
.....................................................................................................TGGCTCAGTTCAGCAGGGACAG......................................................... 22 1 2 43.00 86 48 35 2 0 0 1
.....................................................................................................TGGCTCAGTTTAGCAGGAAC........................................................... 20 1 2 43.00 86 42 43 0 1 0 0
.....................................................................................................TGACTCAGTTCAGCAGGAACAGT........................................................ 23 2 3 40.33 121 56 61 3 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAGCAG......................................................... 22 1 3 38.00 114 57 53 4 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTG....................................................... 24 2 2 38.00 76 41 29 6 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACACC........................................................ 23 2 4 37.00 148 82 66 0 0 0 0
.....................................................................................................AGGCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 35.00 70 35 28 7 0 0 0
.....................................................................................................TGGCTTAGTTCAGCAGGAAC........................................................... 20 1 2 34.00 68 34 32 0 0 2 0
.....................................................................................................TGGCTCGGTTCAGCAGGAACAGT........................................................ 23 2 2 34.00 68 36 26 5 0 1 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACATT........................................................ 23 2 2 33.50 67 27 21 14 1 1 3
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTC....................................................... 24 2 2 33.00 66 32 33 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGGT....................................................... 24 1 2 32.50 65 31 25 7 1 1 0
......................................................................................................GGCTCAGTTCAGCAGGAACAGC........................................................ 22 1 2 32.50 65 33 32 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACGGT........................................................ 23 2 2 32.50 65 31 26 7 0 1 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTAA...................................................... 25 2 2 32.50 65 31 24 9 0 0 1
.....................................................................................................TGGTTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 32.00 64 34 25 5 0 0 0
.....................................................................................................TGACTCAGTTCAGCAGGAAC........................................................... 20 1 3 31.00 93 47 44 0 1 1 0
.....................................................................................................TGGCTCAGTTCAGCAGGCAC........................................................... 20 1 2 30.50 61 34 23 3 0 0 1
.....................................................................................................TGGCTCAATTCAGCAGGAACAG......................................................... 22 1 2 30.00 60 28 31 1 0 0 0
.....................................................................................................TGGCTCCGTTCAGCAGGAACAGT........................................................ 23 2 2 29.50 59 19 23 15 0 0 2
.....................................................................................................TGGCTCAGTTCCGCAGGAACAG......................................................... 22 1 2 29.00 58 36 21 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGCACAGT........................................................ 23 2 2 28.50 57 19 26 11 0 0 1
.....................................................................................................TGGCTCAGTTCAACAGGAACAG......................................................... 22 1 2 28.50 57 27 28 2 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGG........................................................ 21 0 2 28.50 57 29 17 10 0 0 1
.....................................................................................................TGGCTCAGTTCGGCAGGAAC........................................................... 20 1 2 27.50 55 34 21 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACCG......................................................... 22 1 2 27.00 54 24 23 6 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACG.......................................................... 21 1 2 27.00 54 39 13 2 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACCGT........................................................ 23 2 2 26.50 53 18 13 21 0 0 1
.......................................................................................................GCTCAGTTCAGCAGGAACAG......................................................... 20 0 2 26.50 53 27 24 2 0 0 0
....................................................................................................CTGGCTCAGTTCAGCAGGAA............................................................ 20 0 2 26.00 52 34 13 5 0 0 0
...........................................TCGATTGGACCCGCCCTCCG..................................................................................................................... 20 0 1 26.00 26 19 4 1 0 2 0
.....................................................................................................TGGCTCAGTTCAGCAGGAGCAGT........................................................ 23 2 3 25.67 77 43 31 3 0 0 0
.....................................................................................................TGGCTCAGTTCGGCAGGAACAGT........................................................ 23 2 2 25.50 51 25 22 4 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAATAGT........................................................ 23 2 2 25.50 51 26 23 2 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGCACAG......................................................... 22 1 2 25.00 50 25 22 3 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGGACAGT........................................................ 23 2 3 24.00 72 36 31 5 0 0 0
.....................................................................................................TGGCTCAGTTCAGCCGGAACAGT........................................................ 23 2 2 24.00 48 19 12 17 0 0 0
.....................................................................................................CGGCTCAGTTCAGCAGGAAC........................................................... 20 1 2 23.50 47 22 23 0 1 0 1
.....................................................................................................TGGCTCAGTTCAGCAGAAACAGT........................................................ 23 2 2 23.50 47 32 15 0 0 0 0
.....................................................................................................TGGCTCATTTCAGCAGGAACAG......................................................... 22 1 2 23.00 46 28 18 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGTAGGAAC........................................................... 20 1 2 22.00 44 31 12 1 0 0 0
.....................................................................................................TGGCTCAGTACAGCAGGAACAG......................................................... 22 1 2 22.00 44 23 21 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAAGAACAG......................................................... 22 1 2 21.50 43 21 22 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAAAG......................................................... 22 1 2 20.50 41 32 9 0 0 0 0
.....................................................................................................TGGCTCAGCTCAGCAGGAACAGT........................................................ 23 2 4 20.25 81 36 40 4 1 0 0
.....................................................................................................TGGTTCAGTTCAGCAGGAAC........................................................... 20 1 2 20.00 40 21 17 1 1 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGGA....................................................... 24 0 2 20.00 40 26 13 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCGGGAACAGT........................................................ 23 2 3 19.67 59 28 24 7 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGCA....................................................... 24 1 2 19.50 39 20 16 3 0 0 0
.....................................................................................................TGGCTCCGTTCAGCAGGAAC........................................................... 20 1 2 19.00 38 20 17 0 0 1 0
.....................................................................................................TGGCTCAGTTCAACAGGAACAGT........................................................ 23 2 2 19.00 38 20 17 0 0 1 0
.....................................................................................................TGGCTCAGTTCAGTAGGAACAGT........................................................ 23 2 3 18.67 56 33 13 10 0 0 0
.....................................................................................................TGGCTCAGTTTAGCAGGAACAGA........................................................ 23 2 2 18.50 37 27 10 0 0 0 0
.....................................................................................................TGGCTCAGTTCATCAGGAACAG......................................................... 22 1 2 18.50 37 20 15 2 0 0 0
.....................................................................................................TAGCTCAGTTCAGCAGGAAC........................................................... 20 1 3 18.33 55 33 22 0 0 0 0
..............................................................GGTGCCTACTGAGCTGATATCA................................................................................................ 22 0 1 18.00 18 8 2 7 0 0 1
.....................................................................................................TGGCACAGTTCAGCAGGAACAG......................................................... 22 1 2 18.00 36 21 14 1 0 0 0
.....................................................................................................TGGCTCAGATCAGCAGGAACAG......................................................... 22 1 2 18.00 36 20 16 0 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGGT....................................................... 22 1 2 17.50 35 16 2 15 0 1 1
...................................................................................................CATGGCTCAGTTCAGCAGGAACAG......................................................... 24 2 2 17.50 35 19 16 0 0 0 0
.....................................................................................................TGGGTCAGTTCAGCAGGAACAG......................................................... 22 1 2 17.50 35 14 20 1 0 0 0
.....................................................................................................TGGCCCAGTTCAGCAGGAAC........................................................... 20 1 3 17.00 51 30 20 1 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGTA....................................................... 22 1 2 16.50 33 15 8 10 0 0 0
.....................................................................................................TGTCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 16.50 33 18 14 0 0 0 1
.....................................................................................................TGGCTCAATTCAGCAGGAACAGT........................................................ 23 2 2 16.50 33 19 12 1 0 0 1
...............................................................GTGCCTACTGAGCTGATATCAG............................................................................................... 22 0 1 16.00 16 8 3 5 0 0 0
.....................................................................................................TGGCCCAGTTCAGCAGGAACAGT........................................................ 23 2 3 16.00 48 19 23 5 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGTAACAG......................................................... 22 1 2 15.50 31 15 14 1 0 0 1
.....................................................................................................TGGCTAAGTTCAGCAGGAACAG......................................................... 22 1 2 15.50 31 16 15 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCCGGAACAG......................................................... 22 1 2 15.50 31 17 10 4 0 0 0
....................................................................................................ATGGCTCAGTTCAGCAGGAACAGTT....................................................... 25 3 2 15.00 30 14 16 0 0 0 0
.....................................................................................................TTGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 15.00 30 21 8 1 0 0 0
.....................................................................................................TGGGTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 14.50 29 12 13 4 0 0 0
.....................................................................................................TCGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 14.50 29 13 15 1 0 0 0
.....................................................................................................TGGCTCAGTTCAACAGGAAC........................................................... 20 1 2 14.50 29 17 12 0 0 0 0
.....................................................................................................AGGCTCAGTTCAGCAGGAAC........................................................... 20 1 2 14.00 28 15 13 0 0 0 0
.....................................................................................................TGGCTCAGTTCTGCAGGAACAG......................................................... 22 1 2 14.00 28 16 12 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACTG......................................................... 22 1 2 14.00 28 19 9 0 0 0 0
.....................................................................................................TGGCTCAGTTGAGCAGGAACAG......................................................... 22 1 2 14.00 28 15 11 2 0 0 0
.....................................................................................................TGGCTCGGTTCAGCAGGAAC........................................................... 20 1 2 13.50 27 14 13 0 0 0 0
.....................................................................................................TGGCTGAGTTCAGCAGGAACAG......................................................... 22 1 2 13.50 27 11 16 0 0 0 0
.....................................................................................................TGCCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 13.00 26 14 12 0 0 0 0
.....................................................................................................TGGCTCAGTCCAGCAGGAACAGT........................................................ 23 2 3 12.67 38 25 9 3 0 0 1
.....................................................................................................TGGCTCAGTACAGCAGGAACAGT........................................................ 23 2 2 12.50 25 14 10 1 0 0 0
..........................................................................................................CAGTTCAGCAGGAACAG......................................................... 17 0 2 12.50 25 20 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTTA...................................................... 25 3 2 12.50 25 12 12 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAGA.......................................................... 21 1 2 12.50 25 14 9 2 0 0 0
..................................................................................................ATTTGGCTCAGTTCAGCAGGAACAG......................................................... 25 3 2 12.50 25 14 11 0 0 0 0
....................................................................................................CTGGCTCAGTTCAGCAGGAACAGA........................................................ 24 1 2 12.50 25 17 8 0 0 0 0
.....................................................................................................TGGCTCAGTCCAGCAGGAAC........................................................... 20 1 2 12.50 25 13 12 0 0 0 0
.........................................TGTCGATTGGACCCGCCCTCCG..................................................................................................................... 22 0 1 12.00 12 7 2 3 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAGC........................................................... 20 1 3 12.00 36 16 20 0 0 0 0
.....................................................................................................TGGCTCTGTTCAGCAGGAACAG......................................................... 22 1 2 12.00 24 17 7 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAG............................................................ 19 1 4 11.75 47 25 17 3 1 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACAAT........................................................ 23 2 4 11.75 47 23 15 7 0 1 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGCT....................................................... 24 2 2 11.50 23 10 12 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGAAAC........................................................... 20 1 3 11.33 34 18 16 0 0 0 0
.....................................................................................................GGGCTCAGTTCAGCAGGAACAG......................................................... 22 1 2 11.00 22 12 9 0 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGATCAG......................................................... 22 1 2 11.00 22 10 11 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCACGAACAG......................................................... 22 1 2 11.00 22 8 14 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGGAC........................................................... 20 1 3 10.67 32 14 16 2 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAAG........................................................ 23 1 2 10.50 21 11 8 0 0 1 1
.....................................................................................................TGGCTCAGTTCAGCAGGACCAG......................................................... 22 1 2 10.50 21 13 6 2 0 0 0
.....................................................................................................TGTCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 10.50 21 14 7 0 0 0 0
......................................................................................................GGCTCAGTTCAGCAGGAACAGG........................................................ 22 0 2 10.50 21 16 4 1 0 0 0
.....................................................................................................TGGCTCAGTTCCGCAGGAACAGT........................................................ 23 2 3 10.33 31 17 8 5 0 0 1
...............................................................GTGCCTACTGAGCTGATATC................................................................................................. 20 0 1 10.00 10 1 1 7 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGCAACAG......................................................... 22 1 2 10.00 20 13 7 0 0 0 0
.....................................................................................................TGGCTCAGTTAAGCAGGAACAG......................................................... 22 1 2 10.00 20 12 7 0 1 0 0
.....................................................................................................TGGCTCAGTTCAGCAAGAACAGT........................................................ 23 2 2 10.00 20 11 9 0 0 0 0
.....................................................................................................TGGCTCAGTTCCGCAGGAAC........................................................... 20 1 2 9.50 19 9 9 1 0 0 0
....................................................................................................ATGGCTCAGTTCAGCAGGAACAGA........................................................ 24 2 2 9.50 19 9 10 0 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGA........................................................ 21 1 2 9.50 19 9 3 6 1 0 0
.....................................................................................................TGACTCAGTTCAGCAGGAACA.......................................................... 21 1 2 9.50 19 9 10 0 0 0 0
.....................................................................................................TGGCACAGTTCAGCAGGAACAGT........................................................ 23 2 2 9.50 19 8 11 0 0 0 0
......................................................................................................GGCTCAGTTCAGCAGGAA............................................................ 18 0 2 9.50 19 8 10 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAAGAAC........................................................... 20 1 2 9.00 18 9 9 0 0 0 0
................................................................TGCCTACTGAGCTGATATCAGT.............................................................................................. 22 0 1 9.00 9 6 2 0 1 0 0
......................................................................................................TGCTCAGTTCAGCAGGAACAGT........................................................ 22 2 2 9.00 18 8 9 0 0 0 1
....................................................................................................CTGGCTCAGTTCAGCAGGAACAGTT....................................................... 25 2 2 9.00 18 8 10 0 0 0 0
.....................................................................................................TGGCTCAGTTCATCAGGAACAGT........................................................ 23 2 2 9.00 18 9 6 3 0 0 0
.....................................................................................................TGGCTCAGTTCAGGAGGAACAG......................................................... 22 1 2 9.00 18 9 7 2 0 0 0
.....................................................................................................TGGCTCAGTTTAGCAGGAACA.......................................................... 21 1 2 9.00 18 12 6 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCACGAACAGT........................................................ 23 2 2 9.00 18 9 9 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCTGGAACAG......................................................... 22 1 3 9.00 27 12 14 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGATC........................................................... 20 1 2 9.00 18 5 12 0 0 0 1
.....................................................................................................TGGCTCAGTTCAGCGGGAAC........................................................... 20 1 3 8.67 26 15 11 0 0 0 0
.....................................................................................................TTGCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 8.50 17 11 6 0 0 0 0
.....................................................................................................TGGCTCAGATCAGCAGGAACAGT........................................................ 23 2 2 8.50 17 8 9 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCATGAACAG......................................................... 22 1 4 8.50 34 17 14 2 0 0 1
.....................................................................................................TGGCTCAGTTGAGCAGGAAC........................................................... 20 1 2 8.50 17 11 6 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACATA........................................................ 23 2 2 8.50 17 6 3 7 0 0 1
.....................................................................................................TGGATCAGTTCAGCAGGAACAG......................................................... 22 1 2 8.50 17 11 6 0 0 0 0
.....................................................................................................TGGCTCATTTCAGCAGGAACAGT........................................................ 23 2 2 8.50 17 13 4 0 0 0 0
........................................................................................................CTCAGTTCAGCAGGAAC........................................................... 17 0 3 8.33 25 14 7 0 4 0 0
...........................................................................................................AGTTCAGCAGGAACAG......................................................... 16 0 6 8.33 50 27 12 9 0 0 2
....................................................................................................TTGGCTCAGTTCAGCAGGAACAG......................................................... 23 1 2 8.00 16 7 5 4 0 0 0
....................................................................................................ATGGCTCAGTTCAGCAGGAACAGTA....................................................... 25 2 2 8.00 16 4 12 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGAAGGAACAG......................................................... 22 1 2 8.00 16 8 7 1 0 0 0
.....................................................................................................TGTCTCAGTTCAGCAGGAAC........................................................... 20 1 2 8.00 16 12 4 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTTAT..................................................... 26 3 2 8.00 16 10 5 1 0 0 0
.....................................................................................................TGGCTCCGTTCAGCAGGAACA.......................................................... 21 1 2 8.00 16 12 3 0 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAACAAA........................................................ 23 2 6 8.00 48 26 10 11 0 1 0
.....................................................................................................TGGCTCAGCTCAGCAGGAAC........................................................... 20 1 8 7.63 61 24 33 1 3 0 0
.....................................................................................................TGGCTCAGATCAGCAGGAAC........................................................... 20 1 2 7.50 15 6 9 0 0 0 0
.....................................................................................................TGGCTCAGTTGAGCAGGAACAGT........................................................ 23 2 2 7.50 15 5 8 2 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAATA.......................................................... 21 1 2 7.50 15 8 4 1 1 1 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGGA....................................................... 22 0 2 7.50 15 6 1 7 0 0 1
......................................................................................................GGCTCAGTTCAGCAGGA............................................................. 17 0 2 7.50 15 13 1 1 0 0 0
.....................................................................................................TGGCTCAGTTCACCAGGAACAG......................................................... 22 1 4 7.25 29 16 12 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCCGGAAC........................................................... 20 1 2 7.00 14 4 7 3 0 0 0
.....................................................................................................TGGCTCAGTACAGCAGGAAC........................................................... 20 1 2 7.00 14 10 4 0 0 0 0
.....................................................................................................CGGCTCAGTTCAGCAGGAACA.......................................................... 21 1 2 7.00 14 8 5 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGTACAGT........................................................ 23 2 2 7.00 14 6 6 1 0 0 1
.....................................................................................................TGGCTCAGTTAAGCAGGAACAGT........................................................ 23 2 2 7.00 14 8 6 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGACC........................................................... 20 1 2 7.00 14 5 8 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCACGAAC........................................................... 20 1 2 7.00 14 5 9 0 0 0 0
.....................................................................................................TGGCTCTGTTCAGCAGGAACAGT........................................................ 23 2 2 7.00 14 5 9 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGTACAG......................................................... 22 1 2 6.50 13 6 7 0 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGTC....................................................... 22 2 2 6.50 13 6 5 1 0 1 0
.....................................................................................................TGGCTTAGTTCAGCAGGAACA.......................................................... 21 1 2 6.50 13 5 7 1 0 0 0
......................................................................................................TGCTCAGTTCAGCAGGAACAG......................................................... 21 1 2 6.50 13 6 7 0 0 0 0
.....................................................................................................TGGGTCAGTTCAGCAGGAAC........................................................... 20 1 2 6.50 13 6 7 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGTAACAGT........................................................ 23 2 3 6.33 19 8 7 3 0 0 1
.....................................................................................................TGGCTCAGTTCAGCAGGAAAAA......................................................... 22 2 3 6.33 19 7 5 5 0 1 1
.....................................................................................................TGGCTCAGTTCAGCAGGAC............................................................ 19 1 4 6.25 25 10 9 0 6 0 0
.....................................................................................................TGGCTCAATTCAGCAGGAAC........................................................... 20 1 2 6.00 12 5 7 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGAAT...................................................... 25 2 2 6.00 12 9 3 0 0 0 0
..........................................GTCGATTGGACCCGCCCTCCG..................................................................................................................... 21 0 1 6.00 6 6 0 0 0 0 0
...................................................................................................CATGGCTCAGTTCAGCAGGAACAGT........................................................ 25 3 2 6.00 12 7 5 0 0 0 0
....................................................................................................ATGGCTCAGTTCAGCAGGAACAGC........................................................ 24 2 2 6.00 12 4 8 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACGGA........................................................ 23 2 2 6.00 12 8 4 0 0 0 0
.....................................................................................................TGGCTCATTTCAGCAGGAAC........................................................... 20 1 4 5.75 23 12 11 0 0 0 0
.....................................................................................................TGCCTCAGTTCAGCAGGAACAGT........................................................ 23 2 3 5.67 17 6 10 1 0 0 0
.....................................................................................................TGACTCAGTTCAGCAGGAACAGTT....................................................... 24 3 4 5.50 22 4 18 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGAAC...................................................... 25 2 2 5.50 11 5 6 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGCAACAGT........................................................ 23 2 2 5.50 11 5 4 0 1 0 1
....................................................................................................CTGGCTCAGTTCAGCAGGAAA........................................................... 21 1 2 5.50 11 6 2 1 2 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAGAG......................................................... 22 1 2 5.50 11 6 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTAAT..................................................... 26 2 2 5.50 11 7 4 0 0 0 0
.....................................................................................................TGGCTCACTTCAGCAGGAACAG......................................................... 22 1 2 5.50 11 5 6 0 0 0 0
.....................................................................................................GGGCTCAGTTCAGCAGGAAC........................................................... 20 1 2 5.50 11 3 8 0 0 0 0
.....................................................................................................TGGCTCAGTTCGGCAGGAACAGA........................................................ 23 2 2 5.50 11 7 4 0 0 0 0
.....................................................................................................TGGCTTAGTTCAGCAGGAACAGA........................................................ 23 2 2 5.50 11 9 2 0 0 0 0
......................................................................................................GGCTCAGTTCAGCAGG.............................................................. 16 0 4 5.25 21 16 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGAAGGAACAGT........................................................ 23 2 2 5.00 10 6 3 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCTGGAACAGT........................................................ 23 2 3 5.00 15 4 11 0 0 0 0
.....................................................................................................TGGCTCAGTTCACCAGGAACAGT........................................................ 23 2 4 5.00 20 12 7 1 0 0 0
..............................................................GGTGCCTACTGAGCTGATATCAG............................................................................................... 23 0 1 5.00 5 4 0 0 1 0 0
.......................................................................................................GCTCAGTTCAGCAGGAACAGC........................................................ 21 1 2 5.00 10 6 3 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAGAGT........................................................ 23 2 2 5.00 10 2 8 0 0 0 0
.....................................................................................................TGGATCAGTTCAGCAGGAACAGT........................................................ 23 2 2 5.00 10 6 3 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGATCAGT........................................................ 23 2 2 5.00 10 4 6 0 0 0 0
.....................................................................................................TAGCTCAGTTCAGCAGGAACAGA........................................................ 23 2 2 5.00 10 7 3 0 0 0 0
....................................................................................................CTGGCTCAGTTCAGCAGGAACAC......................................................... 23 1 2 5.00 10 7 3 0 0 0 0
........................................................................................................CTCAGTTCAGCAGGAACAG......................................................... 19 0 2 5.00 10 7 3 0 0 0 0
..............................................................GGTGCCTACTGAGCTGATATCAGT.............................................................................................. 24 0 1 5.00 5 2 1 2 0 0 0
.....................................................................................................TGGCTCAGTTCAGTAGGAACA.......................................................... 21 1 2 5.00 10 6 2 1 1 0 0
.....................................................................................................TGGATCAGTTCAGCAGGAAC........................................................... 20 1 3 4.67 14 7 7 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAAAAGT........................................................ 23 2 3 4.67 14 9 3 0 2 0 0
.....................................................................................................TGGTTCAGTTCAGCAGGAACAGA........................................................ 23 2 2 4.50 9 7 2 0 0 0 0
.....................................................................................................TGGCTCAGGTCAGCAGGAACAG......................................................... 22 1 2 4.50 9 3 4 2 0 0 0
.....................................................................................................TGGCTCGGTTCAGCAGGAACAGA........................................................ 23 2 2 4.50 9 6 2 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGGACA.......................................................... 21 1 2 4.50 9 7 2 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGGAGGAACAGT........................................................ 23 2 2 4.50 9 4 5 0 0 0 0
.....................................................................................................TAGCTCAGTTCAGCAGGAACA.......................................................... 21 1 2 4.50 9 4 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTAG...................................................... 25 1 2 4.50 9 4 5 0 0 0 0
.....................................................................................................TCGCTCAGTTCAGCAGGAAC........................................................... 20 1 2 4.50 9 4 5 0 0 0 0
.....................................................................................................TGGCTCCGTTCAGCAGGAACAGA........................................................ 23 2 2 4.50 9 8 1 0 0 0 0
.....................................................................................................CGGCTCAGTTCAGCAGGAACAGA........................................................ 23 2 2 4.50 9 7 1 1 0 0 0
.......................................................................................................GCTCAGTTCAGCAGGAAC........................................................... 18 0 2 4.50 9 4 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGACCAGT........................................................ 23 2 2 4.50 9 2 3 4 0 0 0
.....................................................................................................TGGTTCAGTTCAGCAGGAACA.......................................................... 21 1 2 4.50 9 7 2 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAGCA.......................................................... 21 1 3 4.33 13 4 8 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACGA......................................................... 22 2 3 4.33 13 8 4 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACTGT........................................................ 23 2 3 4.33 13 4 8 1 0 0 0
.....................................................................................................TGACTCAGTTCAGCAGGAACAGA........................................................ 23 2 2 4.00 8 6 2 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACC.......................................................... 21 1 2 4.00 8 3 2 3 0 0 0
..............................................................GGTGCCTACTGAGCTGATATC................................................................................................. 21 0 1 4.00 4 2 0 2 0 0 0
.....................................................................................................AGGCTCAGTTCAGCAGGAACA.......................................................... 21 1 2 4.00 8 6 1 1 0 0 0
......................................................................................................GGCTCAGTTCAGCAGGAACAA......................................................... 21 1 2 4.00 8 1 0 7 0 0 0
.....................................................................................................TGGCGCAGTTCAGCAGGAACAG......................................................... 22 1 2 4.00 8 2 6 0 0 0 0
.....................................................................................................TCGCTCAGTTCAGCAGGAACAGT........................................................ 23 2 2 4.00 8 5 3 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGTATT..................................................... 26 2 2 4.00 8 3 4 1 0 0 0
.....................................................................................................TGGCTCAGTTCAGCAGGAACAGGTT...................................................... 25 2 2 4.00 8 7 1 0 0 0 0
........................................CTGTCGATTGGACCCGCCCTCCG..................................................................................................................... 23 0 1 4.00 4 2 0 1 0 1 0
.....................................................................................................TGGCTCAGTTCGGCAGGAACA.......................................................... 21 1 2 4.00 8 3 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCGGGAACAGA........................................................ 23 2 2 4.00 8 3 5 0 0 0 0
..................................................................................................ATTTGGCTCAGTTCAGCAGGAAC........................................................... 23 3 6 3.83 23 13 10 0 0 0 0
.....................................................................................................TGGCTCAGGTCAGCAGGAACAGT........................................................ 23 2 4 3.75 15 5 4 5 0 0 1
.....................................................................................................TGGCTAAGTTCAGCAGGAACAGT........................................................ 23 2 3 3.67 11 6 5 0 0 0 0
.....................................................................................................TGGCTCAGTTCAGCACGAACA.......................................................... 21 1 2 3.50 7 2 4 1 0 0 0

Anti-sense strand reads

CCCGGCGCGGTCGAGGGTCGCCTCCGTGACGAAGAGGCCCGACAGCTAACCTGGGCGGGAGGCCACGGATGACTCGACTATAGTCAAGAGTAAAATGTGTGACCGAGTCAAGTCGTCCTTGTCCTCAGCTCGGGAGCTCGTTTCGGAAGGACGAACATTCACGGGTCTCCGAGCCCTCGA

******************************************.((...((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))...))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes
...................................................................................................TGACCGAGTCAAGTCGTCCTTG........................................................... 22 0 2 2.00 4 3 1
....................................................................................................GACCGAGTCAAGTCGTCCTTGT.......................................................... 22 0 2 1.50 3 1 2
....................................................................................................GACCGAGTCAAGTCGTCCTTG........................................................... 21 0 2 0.50 1 0 1

Generated: 09/01/2015 at 11:23 AM