ID:

ssc-mir-23b

Coordinate:

chr10:31341114-31341193 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.4 -37.8 -37.7

Sense Strand Reads

GTCCGAGGAACCCGCGGCGTGCGATGTGGGCAGCGGCGCTGCCCCGAGTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTAAGATTAAAATCACATTGCCAGGGATTACCACGCAGCCACGACCCTGGCTGCTCCTCCAGAAGCCATAGTTACCCTCTCTCTGCAGTGCG

**********************************************.....(((((((((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))))))).))....********************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR139075

testes
SRR066810

testes
SRR1274763

ovary
SRR139076

testes
SRR1274764

testes
...................................................................................................ATCACATTGCCAGGGATTACCACT......................................................... 24 1 1 15736.00 15736 9029 2499 2817 904 268 219
...................................................................................................ATCACATTGCCAGGGATTACCA........................................................... 22 0 1 13012.00 13012 4948 5065 1801 290 829 79
...................................................................................................ATCACATTGCCAGGGATTACC............................................................ 21 0 1 9263.00 9263 3762 2093 1645 846 321 596
...................................................................................................ATCACATTGCCAGGGATTACCAC.......................................................... 23 0 1 7015.00 7015 3212 2129 989 320 327 38
...................................................................................................ATCACATTGCCAGGGATTAC............................................................. 20 0 1 1887.00 1887 236 1339 130 22 135 25
...................................................................................................ATCACATTGCCAGGGATTACCAT.......................................................... 23 1 1 1182.00 1182 153 830 73 20 103 3
...................................................................................................ATCACATTGCCAGGGATTA.............................................................. 19 0 1 961.00 961 34 800 27 2 94 4
....................................................................................................TCACATTGCCAGGGATTACCACT......................................................... 23 1 1 886.00 886 412 188 175 72 14 25
.............................................................TGGGTTCCTGGCATGCTGATTT................................................................................................. 22 0 1 883.00 883 3 804 2 1 72 1
...................................................................................................ATCACATTGCCAGGGATTACCACA......................................................... 24 1 1 598.00 598 262 203 72 36 21 4
...................................................................................................ATCACATTGCCAGGGATT............................................................... 18 0 2 405.00 810 277 308 177 16 14 18
..............................................................GGGTTCCTGGCATGCTGATTT................................................................................................. 21 0 1 330.00 330 1 319 0 0 10 0
...................................................................................................ATCACATTGCCAGGGATTACCATT......................................................... 24 2 2 319.00 638 297 147 161 14 17 2
......................................................................................................ACATTGCCAGGGATTACCA........................................................... 19 0 1 292.00 292 48 198 16 10 20 0
...................................................................................................ATCACATTGCCAGGGATTACA............................................................ 21 1 1 276.00 276 31 181 24 4 34 2
......................................................................................................ACATTGCCAGGGATTACCACT......................................................... 21 1 1 247.00 247 83 103 27 16 17 1
...................................................................................................ATCACATTGCCAGGGATTAA............................................................. 20 1 1 204.00 204 8 160 6 3 26 1
.............................................................TGGGTTCCTGGCATGCTGATT.................................................................................................. 21 0 1 167.00 167 1 150 0 1 15 0
......................................................................................................ACATTGCCAGGGATTACC............................................................ 18 0 1 162.00 162 35 94 10 14 6 3
..............................................................GGGTTCCTGGCATGCTGATT.................................................................................................. 20 0 1 159.00 159 2 150 0 1 6 0
......................................................................................................ACATTGCCAGGGATTACCAC.......................................................... 20 0 1 145.00 145 29 93 9 8 6 0
...................................................................................................ATCACATTGCCAGGGATTACCACC......................................................... 24 1 1 143.00 143 98 11 29 3 0 2
...................................................................................................ATCACATTGCCAGGGATTACT............................................................ 21 1 1 126.00 126 19 73 7 8 13 6
....................................................................................................TCACATTGCCAGGGATTACCA........................................................... 21 0 1 121.00 121 48 45 19 4 4 1
....................................................................................................TCACATTGCCAGGGATTACCAC.......................................................... 22 0 1 118.00 118 39 47 20 8 2 2
...................................................................................................ATCACATTGCCAGGGATTATC............................................................ 21 1 1 113.00 113 3 89 1 0 19 1
...................................................................................................ATCACATTGCCAGGGATTACCACTT........................................................ 25 2 1 108.00 108 42 37 22 5 1 1
...................................................................................................ATCACATTGCCAGGGATTAT............................................................. 20 1 1 105.00 105 10 74 5 2 14 0
...................................................................................................ATCACATTGCCAGGGATTACCT........................................................... 22 1 1 86.00 86 21 26 14 12 9 4
...................................................................................................ATCACATTGCCAGGGATTACCACG......................................................... 24 0 1 73.00 73 31 24 8 6 3 1
....................................................................................................TCACATTGCCAGGGATTACC............................................................ 20 0 1 69.00 69 24 15 14 6 0 10
....................................................................................................TCACATTGCCAGGGATTACCACA......................................................... 23 1 1 67.00 67 25 28 3 8 2 1
.............................................................TGGGTTCCTGGCATGCTGATTTT................................................................................................ 23 1 1 60.00 60 0 57 0 0 3 0
...................................................................................................ATCACATTGCCAGGGATTACCAA.......................................................... 23 1 2 59.50 119 15 90 3 4 7 0
......................................................................................................ACATTGCCAGGGATTACCAT.......................................................... 20 1 1 54.00 54 1 50 2 1 0 0
...................................................................................................ATCACATTGCCAGGGATTATCA........................................................... 22 1 1 54.00 54 1 39 0 0 14 0
...................................................................................................ATCACATTGCCAGGGATTACTA........................................................... 22 1 1 53.00 53 3 41 1 0 8 0
......................................................................................................ACATTGCCAGGGATTAC............................................................. 17 0 1 50.00 50 3 42 1 0 4 0
...................................................................................................ATCACATTGCCAGGGATTTCCAC.......................................................... 23 1 2 46.00 92 40 27 17 0 8 0
.............................................................TGGGTTCCTGGCATGCTGATTTA................................................................................................ 23 1 1 45.00 45 0 41 0 0 4 0
....................................................................................................TCACATTGCCAGGGATTACCACTT........................................................ 24 2 1 42.00 42 23 10 7 1 1 0
......................................................................................................ACATTGCCAGGGATTA.............................................................. 16 0 1 40.00 40 2 33 0 0 5 0
...................................................................................................ATCACATTGCCAGGGA................................................................. 16 0 2 35.00 70 41 9 18 1 1 0
............................................................TTGGGTTCCTGGCATGCTGATT.................................................................................................. 22 0 1 35.00 35 0 31 0 0 4 0
...................................................................................................ATCACATTGCCAGGGAT................................................................ 17 0 2 34.50 69 24 19 21 3 1 1
.............................................................TGGGTTCCTGGCATGCTGAT................................................................................................... 20 0 1 34.00 34 1 30 0 0 3 0
...................................................................................................ATCACATTGTCAGGGATTACC............................................................ 21 1 1 33.00 33 5 7 0 5 2 14
..................................................................................................AATCACATTGCCAGGGATTACC............................................................ 22 0 1 33.00 33 11 13 6 1 1 1
....................................................................................................TCACATTGCCAGGGATTACCATT......................................................... 23 2 2 28.00 56 31 13 11 1 0 0
...................................................................................................ATCACATTGCCAGGGATTCCA............................................................ 21 2 3 26.33 79 15 51 11 1 1 0
...................................................................................................ATCACATTGCCAGGGATTCC............................................................. 20 1 2 26.00 52 9 31 7 0 5 0
...................................................................................................ATCACATTGCCAGGG.................................................................. 15 0 2 26.00 52 32 2 18 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCACTA........................................................ 25 2 1 24.00 24 12 9 0 1 2 0
...................................................................................................ATCACATTGCTAGGGATTACC............................................................ 21 1 1 24.00 24 6 13 4 0 0 1
....................................................................................................TCACATTGCCAGGGATTAC............................................................. 19 0 1 24.00 24 1 20 1 0 1 1
..................................................................................................CATCACATTGCCAGGGATTACCACT......................................................... 25 2 1 23.00 23 14 6 3 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCG........................................................... 22 1 1 23.00 23 8 8 3 3 1 0
...................................................................................................ATCACATTGCCAGGGATA............................................................... 18 1 2 22.00 44 12 22 9 0 1 0
...................................................................................................ATTACATTGCCAGGGATTACCACT......................................................... 24 2 1 22.00 22 6 12 3 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACAA........................................................... 22 1 1 22.00 22 1 12 1 0 7 1
..................................................................................................AATCACATTGCCAGGGATTACCA........................................................... 23 0 1 22.00 22 5 14 1 0 2 0
...................................................................................................ATCACATTGCCAGGGATTACCATA......................................................... 24 2 1 21.00 21 7 6 8 0 0 0
...................................................................................................ATCACATTGCCAGGGATTCCCA........................................................... 22 1 2 21.00 42 17 14 10 0 1 0
...................................................................................................ATCACATTGCCAGGGATAA.............................................................. 19 1 1 21.00 21 1 15 0 0 5 0
...................................................................................................ATTACATTGCCAGGGATTACCA........................................................... 22 1 1 21.00 21 3 12 0 0 6 0
..............................................................GGGTTCCTGGCATGCTGAT................................................................................................... 19 0 1 19.00 19 1 17 0 0 1 0
..................................................................................................AATCACATTGCCAGGGATTAC............................................................. 21 0 1 19.00 19 0 18 0 0 1 0
...................................................................................................ATCACATTGCCCGGGATTACCACT......................................................... 24 2 1 19.00 19 9 6 2 0 2 0
....................................................................................................TCACATTGCCAGGGATTACCAT.......................................................... 22 1 1 18.00 18 6 7 3 1 1 0
...................................................................................................ATCACATTGCCAGGGATTACCACAT........................................................ 25 2 1 17.00 17 3 13 1 0 0 0
............................................................TTGGGTTCCTGGCATGCTGATTT................................................................................................. 23 0 1 17.00 17 0 16 0 0 1 0
......................................................................................................ACATTGCCAGGGATTACCACA......................................................... 21 1 1 16.00 16 3 9 1 2 1 0
..............................................................GGGTTCCTGGCATGCTGATTTA................................................................................................ 22 1 1 16.00 16 0 15 0 0 1 0
...................................................................................................ATCACATTGCCAGGGCTTACCA........................................................... 22 1 1 15.00 15 4 5 1 0 5 0
...................................................................................................ATCACATTGCCCGGGATTAC............................................................. 20 1 1 14.00 14 2 11 0 0 1 0
.............................................................TGGGTTCCTGGCATGCTGATTA................................................................................................. 22 1 1 14.00 14 0 13 0 0 1 0
...................................................................................................ATCACATTGCTAGGGATTACCA........................................................... 22 1 1 14.00 14 5 4 5 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCCCT......................................................... 24 2 1 13.00 13 6 3 2 0 1 1
...................................................................................................ATCACATTGCCAGGGATTACCGCT......................................................... 24 2 1 13.00 13 9 3 1 0 0 0
...................................................................................................ATCACATTGTCAGGGATTACCA........................................................... 22 1 1 13.00 13 4 8 1 0 0 0
...................................................................................................ATCACATTGCCCGGGATTACCA........................................................... 22 1 1 13.00 13 0 12 0 0 1 0
...................................................................................................ATCACATTGCCAGGGCTTACC............................................................ 21 1 1 13.00 13 2 4 0 1 5 1
..................................................................................................CATCACATTGCCAGGGATTACCA........................................................... 23 1 1 13.00 13 7 5 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCCC.......................................................... 23 1 1 13.00 13 4 5 3 0 1 0
...................................................................................................ATTACATTGCCAGGGATTACC............................................................ 21 1 1 13.00 13 4 8 1 0 0 0
...................................................................................................ATCACATTGCCCGGGATTACC............................................................ 21 1 1 12.00 12 2 9 0 0 1 0
..............................................................GGGTTCCTGGCATGCTGATTTT................................................................................................ 22 1 1 12.00 12 0 12 0 0 0 0
...................................................................................................ATCACATTGCCCGGGATTACCAC.......................................................... 23 1 1 12.00 12 2 7 2 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACTAC.......................................................... 23 1 1 12.00 12 3 8 0 0 1 0
...................................................................................................ATCACATTACCAGGGATTACCA........................................................... 22 1 1 12.00 12 5 4 2 0 1 0
...................................................................................................ATCACATCGCCAGGGATTACCACT......................................................... 24 2 1 12.00 12 9 2 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACTT........................................................... 22 2 1 11.00 11 3 5 1 0 1 1
...................................................................................................ACCACATTGCCAGGGATTACCACT......................................................... 24 2 1 11.00 11 10 1 0 0 0 0
...................................................................................................ATCACATTGCTAGGGATTACCACT......................................................... 24 2 1 11.00 11 7 3 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCATC......................................................... 24 2 1 11.00 11 5 0 5 1 0 0
...................................................................................................ATCACATTGCCAGGGCTTACCACT......................................................... 24 2 1 11.00 11 6 3 0 0 2 0
...................................................................................................GTCACATTGCCAGGGATTACCACT......................................................... 24 2 1 11.00 11 6 2 2 0 1 0
...................................................................................................ATCACATTGTCAGGGATTACCACT......................................................... 24 2 1 10.00 10 4 3 2 0 1 0
...................................................................................................ATCACATTGCCGGGGATTACCACT......................................................... 24 2 1 10.00 10 6 0 3 0 1 0
...................................................................................................GTCACATTGCCAGGGATTACCA........................................................... 22 1 1 10.00 10 2 4 3 0 1 0
...................................................................................................ATCACATTGCCAGGGACTACCACT......................................................... 24 2 1 10.00 10 6 4 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACG............................................................ 21 1 1 10.00 10 3 4 0 1 1 1
...................................................................................................ATCATATTGCCAGGGATTACCAC.......................................................... 23 1 1 10.00 10 3 7 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCC........................................................... 22 1 1 10.00 10 1 7 1 0 1 0
...................................................................................................ATCACATTGCCAGTGATTACCA........................................................... 22 1 1 10.00 10 0 8 1 0 1 0
...................................................................................................ATCACATTGCCAGGGATTCCC............................................................ 21 1 2 10.00 20 8 7 4 0 1 0
...................................................................................................ATCACATTGCCAGGGATTATCAC.......................................................... 23 1 1 10.00 10 1 6 1 0 2 0
...................................................................................................ATCACATTGCCAGGGACTACCA........................................................... 22 1 1 9.00 9 1 5 2 0 1 0
...................................................................................................TTCACATTGCCAGGGATTACCA........................................................... 22 1 1 9.00 9 6 1 1 0 1 0
..................................................................................................CATCACATTGCCAGGGATTACC............................................................ 22 1 1 9.00 9 4 2 3 0 0 0
...................................................................................................ATCACATTGCCAGGGCTTAC............................................................. 20 1 1 9.00 9 0 6 0 0 3 0
...................................................................................................ATCACATTGCCAGGGATTATCACT......................................................... 24 2 1 9.00 9 1 7 0 0 1 0
...................................................................................................ATCATATTGCCAGGGATTACCA........................................................... 22 1 1 9.00 9 2 7 0 0 0 0
...............................................................GGTTCCTGGCATGCTGATTT................................................................................................. 20 0 1 9.00 9 0 9 0 0 0 0
...................................................................................................ATCGCATTGCCAGGGATTACCAC.......................................................... 23 1 1 9.00 9 3 4 1 0 1 0
...................................................................................................ATCACATTGCCAGGGATTCCCAC.......................................................... 23 1 1 9.00 9 2 7 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTGCCA........................................................... 22 1 2 8.50 17 1 12 2 0 2 0
...................................................................................................ATCACATTGCCAGGGGTTACC............................................................ 21 1 1 8.00 8 3 3 1 0 0 1
...................................................................................................ATCACATTGCCAGGGATTC.............................................................. 19 1 2 8.00 16 3 10 0 0 3 0
...................................................................................................ATCACATTGCCAGGGATTACCACAA........................................................ 25 2 1 8.00 8 1 4 1 1 1 0
...................................................................................................ATCACATTGCCAGGGATTACCTT.......................................................... 23 2 1 8.00 8 2 3 2 0 1 0
..................................................................................................AATCACATTGCCAGGGATT............................................................... 19 0 2 8.00 16 5 10 1 0 0 0
...................................................................................................ATCACATTGCTAGGGATTACCAC.......................................................... 23 1 1 8.00 8 1 6 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACCACTTT....................................................... 26 3 1 8.00 8 2 2 2 0 2 0
..................................................................................................CATCACATTGCCAGGGATTACCAC.......................................................... 24 1 1 8.00 8 3 4 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCAG.......................................................... 23 1 1 8.00 8 4 3 0 1 0 0
...................................................................................................TTCACATTGCCAGGGATTACCACT......................................................... 24 2 1 8.00 8 5 1 2 0 0 0
...................................................................................................ATCACCTTGCCAGGGATTACCA........................................................... 22 1 1 8.00 8 0 7 0 0 1 0
...................................................................................................ATCACGTTGCCAGGGATTACCACT......................................................... 24 2 1 8.00 8 4 1 3 0 0 0
...................................................................................................ATCACATTTCCAGGGATTACCA........................................................... 22 1 1 8.00 8 2 5 0 0 1 0
...................................................................................................ATCACGTTGCCAGGGATTACC............................................................ 21 1 1 8.00 8 2 3 3 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCACGT........................................................ 25 1 1 8.00 8 3 3 1 1 0 0
...................................................................................................ATCGCATTGCCAGGGATTACCA........................................................... 22 1 1 8.00 8 4 4 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTTCCATG......................................................... 24 2 2 7.50 15 8 1 6 0 0 0
......................................................................................................ACATTGCCAGGGATTACCATT......................................................... 21 2 2 7.50 15 2 11 2 0 0 0
....................................................................................................TCACATTGCCAGGGATTACCACC......................................................... 23 1 1 7.00 7 5 1 1 0 0 0
...................................................................................................ATCACATTGCCAGGGGTTACCA........................................................... 22 1 1 7.00 7 3 4 0 0 0 0
...................................................................................................ATCACATTGCCAGGTATTACCA........................................................... 22 1 1 7.00 7 3 4 0 0 0 0
..............................................................GGGTTCCTGGCATGCTGATTTG................................................................................................ 22 0 1 7.00 7 0 7 0 0 0 0
...................................................................................................ATCACGTTGCCAGGGATTACCA........................................................... 22 1 1 7.00 7 2 3 0 0 2 0
...................................................................................................ATCACATTGTCAGGGATTAC............................................................. 20 1 1 7.00 7 1 3 0 1 2 0
..................................................................................................AATCACATTGCCAGGGATTACCAC.......................................................... 24 0 1 7.00 7 0 5 2 0 0 0
...................................................................................................ATCACATTACCAGGGATTACCACT......................................................... 24 2 1 7.00 7 3 4 0 0 0 0
....................................................................................................TCACATTGCCAGGGATTACA............................................................ 20 1 2 6.50 13 2 9 0 0 1 1
..................................................................................................AATCACATTGCCAGGGATTACCACT......................................................... 25 1 1 6.00 6 4 0 2 0 0 0
...................................................................................................ATCACATTGCCAGGGACTACC............................................................ 21 1 1 6.00 6 2 1 0 1 1 1
...................................................................................................ATCACATTGCCAGGTATTACCACT......................................................... 24 2 1 6.00 6 3 2 1 0 0 0
...................................................................................................ATCACATTGCCAAGGATTACCACT......................................................... 24 2 1 6.00 6 4 1 1 0 0 0
...................................................................................................ATCACATTGCCAGGGCTTACCAC.......................................................... 23 1 1 6.00 6 2 1 0 0 3 0
..............................................................GGGTTCCTGGCATGCTGATTTTT............................................................................................... 23 1 1 6.00 6 0 6 0 0 0 0
...................................................................................................ATCCCATTGCCAGGGATTACCACT......................................................... 24 2 1 6.00 6 1 4 0 0 1 0
.............................................................TGGGTTCCTGGCATGCTGCTTT................................................................................................. 22 1 1 6.00 6 0 6 0 0 0 0
...................................................................................................ATCCCATTGCCAGGGATTACCA........................................................... 22 1 1 6.00 6 0 5 0 0 1 0
...................................................................................................ATCATATTGCCAGGGATTACCACT......................................................... 24 2 1 6.00 6 2 4 0 0 0 0
...................................................................................................ATTACATTGCCAGGGATTAC............................................................. 20 1 1 6.00 6 0 6 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATCACCA........................................................... 22 1 1 6.00 6 1 5 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTTCCACC......................................................... 24 2 2 5.50 11 2 1 7 1 0 0
......................................................................................................ACATTGCCAGGGATT............................................................... 15 0 4 5.00 20 4 15 1 0 0 0
...................................................................................................ATCACATTGCCCGGGATTA.............................................................. 19 1 1 5.00 5 0 4 0 0 1 0
...................................................................................................ATCACATTTCCAGGGATTACCACT......................................................... 24 2 1 5.00 5 2 1 0 0 2 0
..............................................................GGGCTCCTGGCATGCTGATTT................................................................................................. 21 1 1 5.00 5 0 5 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCACTAT....................................................... 26 3 1 5.00 5 3 1 1 0 0 0
...................................................................................................AACACATTGCCAGGGATTACCACT......................................................... 24 2 1 5.00 5 4 0 1 0 0 0
...................................................................................................ATCACCTTGCCAGGGATTACC............................................................ 21 1 1 5.00 5 0 4 0 0 1 0
..................................................................................................CATCACATTGCCAGGGATTAC............................................................. 21 1 1 5.00 5 2 3 0 0 0 0
...................................................................................................ATCACATTGCCGGGGATTACCAC.......................................................... 23 1 1 5.00 5 1 2 0 0 2 0
...................................................................................................ATCACATTGGCAGGGATTACCA........................................................... 22 1 1 5.00 5 1 3 0 0 1 0
.............................................................TGGGGTCCTGGCATGCTGATTT................................................................................................. 22 1 1 5.00 5 0 5 0 0 0 0
..................................................................................................TATCACATTGCCAGGGATTACCAC.......................................................... 24 1 1 5.00 5 0 5 0 0 0 0
...................................................................................................ATCACATTGCCATGGATTACCA........................................................... 22 1 1 5.00 5 1 3 0 0 1 0
...................................................................................................ATCACATTGCCAGTGATTACCAC.......................................................... 23 1 1 5.00 5 0 4 0 0 1 0
...................................................................................................ATCACATTTCCAGGGATTACC............................................................ 21 1 1 5.00 5 0 3 1 0 1 0
...................................................................................................ATCACATTGCCGGGGATTACCA........................................................... 22 1 1 5.00 5 1 4 0 0 0 0
..........................................CCCGAGTGCTCTGGCTGCTT...................................................................................................................... 20 0 1 5.00 5 0 0 0 5 0 0
...................................................................................................ACCACATTGCCAGGGATTACCA........................................................... 22 1 1 5.00 5 2 3 0 0 0 0
.............................................................TGGGTTTCTGGCATGCTGATTT................................................................................................. 22 1 1 5.00 5 0 4 0 0 1 0
...................................................................................................GTCACATTGCCAGGGATTACC............................................................ 21 1 1 5.00 5 2 1 1 1 0 0
..............................................................GGGTTCCTGGCATGCTGATTTGT............................................................................................... 23 0 1 5.00 5 0 5 0 0 0 0
...................................................................................................ATTACATTGCCAGGGATTACCAC.......................................................... 23 1 1 5.00 5 2 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACTACT......................................................... 24 2 1 5.00 5 3 2 0 0 0 0
...................................................................................................ATCACATTGTTAGGGATTACCA........................................................... 22 2 1 5.00 5 1 2 0 0 2 0
...................................................................................................ATCACATCGCCAGGGATTACC............................................................ 21 1 1 5.00 5 2 2 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCATTT........................................................ 25 3 3 4.67 14 3 5 4 0 2 0
....................................................................................................TCACATTGCCAGGGATTACCAA.......................................................... 22 1 2 4.50 9 2 6 0 0 1 0
...................................................................................................ATCACATTGCCAGGGTTTACCAC.......................................................... 23 1 1 4.00 4 1 0 1 0 2 0
...................................................................................................ATCACATTGTTAGGGATTACC............................................................ 21 2 1 4.00 4 2 2 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTAG............................................................. 20 1 1 4.00 4 3 1 0 0 0 0
...................................................................................................ATCACATTGCCGGGGATTACC............................................................ 21 1 1 4.00 4 3 0 1 0 0 0
...................................................................................................ATCACATTGCCAGGGGTTACCACT......................................................... 24 2 1 4.00 4 3 1 0 0 0 0
...................................................................................................ATTACATTGCCAGGGATTACCAT.......................................................... 23 2 1 4.00 4 1 3 0 0 0 0
................................................................................................TTAATCACATTGCCAGGGATTACCACT......................................................... 27 3 1 4.00 4 4 0 0 0 0 0
......................................................................................................ACATTGCCAGGGATTACT............................................................ 18 1 1 4.00 4 0 3 0 0 1 0
...................................................................................................ACCACATTGCCAGGGATTACC............................................................ 21 1 1 4.00 4 2 1 1 0 0 0
...................................................................................................ATCACATTGCCGGGGATTAC............................................................. 20 1 1 4.00 4 0 2 2 0 0 0
...................................................................................................ATCACATCGCCAGGGATTACCAC.......................................................... 23 1 1 4.00 4 1 3 0 0 0 0
...................................................................................................ATCACCTTGCCAGGGATTACCACT......................................................... 24 2 1 4.00 4 2 1 0 0 1 0
..............................................................GGGGTCCTGGCATGCTGATTT................................................................................................. 21 1 1 4.00 4 0 4 0 0 0 0
...................................................................................................ATCACATTGCCAGTGATTACCACT......................................................... 24 2 1 4.00 4 2 2 0 0 0 0
...................................................................................................ATCACACTGCCAGGGATTACCACT......................................................... 24 2 1 4.00 4 2 0 2 0 0 0
...................................................................................................ATCACATTGCCAGAGATTACCA........................................................... 22 1 1 4.00 4 2 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGAATTACCACT......................................................... 24 2 1 4.00 4 4 0 0 0 0 0
...................................................................................................ATCTCATTGCCAGGGATTACCA........................................................... 22 1 1 4.00 4 1 2 0 0 1 0
.....................................................................................................CACATTGCCAGGGATTACCACT......................................................... 22 1 1 4.00 4 2 0 1 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACCACTAA....................................................... 26 2 1 4.00 4 1 3 0 0 0 0
...................................................................................................ATCGCATTGCCAGGGATTACCACT......................................................... 24 2 1 4.00 4 1 2 1 0 0 0
...................................................................................................ATCACATTGCCAGCGATTACCACT......................................................... 24 2 1 4.00 4 3 1 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTGCCAC.......................................................... 23 1 1 4.00 4 1 3 0 0 0 0
...................................................................................................ATCCCATTGCCAGGGATTACC............................................................ 21 1 1 4.00 4 0 3 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACCTCT......................................................... 24 2 1 4.00 4 3 1 0 0 0 0
...................................................................................................ATCACATTACCAGGGATTACC............................................................ 21 1 1 4.00 4 2 0 1 0 0 1
...................................................................................................ATCACATTGCCAGGCATTACCA........................................................... 22 1 1 4.00 4 0 3 1 0 0 0
...................................................................................................ATCGCATTGCCAGGGATTACC............................................................ 21 1 1 4.00 4 0 3 0 1 0 0
...................................................................................................CTCACATTGCCAGGGATTACCACT......................................................... 24 2 1 4.00 4 1 2 1 0 0 0
...................................................................................................ACCACATTGCCAGGGATTACCAC.......................................................... 23 1 1 4.00 4 1 1 2 0 0 0
......................................................................................................ACATTGCCAGGGATTATC............................................................ 18 1 3 4.00 12 0 8 0 0 4 0
...................................................................................................ATCACATTGTCAGGGATTACCAC.......................................................... 23 1 1 4.00 4 2 2 0 0 0 0
...................................................................................................ATCACATCGCCAGGGATTACCA........................................................... 22 1 1 4.00 4 1 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATCACCACT......................................................... 24 2 1 4.00 4 1 2 1 0 0 0
...................................................................................................ATCCCATTGCCAGGGATTAC............................................................. 20 1 1 4.00 4 0 4 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTG.............................................................. 19 1 2 4.00 8 0 6 1 1 0 0
......................................................................................................ACATTGTCAGGGATTACCACT......................................................... 21 2 1 4.00 4 0 4 0 0 0 0
............................................................TTGGGTTCCTGGCATGCTGAT................................................................................................... 21 0 1 4.00 4 0 3 0 0 1 0
...................................................................................................ATCACATTGCTAGGGATTAC............................................................. 20 1 1 4.00 4 1 2 1 0 0 0
...................................................................................................ATCTCATTGCCAGGGATTACCACT......................................................... 24 2 1 4.00 4 2 0 1 1 0 0
....................................................................................................TCACATTGCCAGGGATTAT............................................................. 19 1 1 4.00 4 1 2 1 0 0 0
.............................................................TGGGTTCCTGGCATGCTGATA.................................................................................................. 21 1 2 3.50 7 0 7 0 0 0 0
......................................................................................................ACATTGCCAGGGATTACCAA.......................................................... 20 1 2 3.50 7 0 7 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTATT............................................................ 21 2 6 3.33 20 0 14 1 0 5 0
.........................................CCCCGAGTGCTCTGGCTGCTT...................................................................................................................... 21 0 1 3.00 3 1 0 0 2 0 0
.............................................................TGGGTTCTTGGCATGCTGATTT................................................................................................. 22 1 1 3.00 3 0 2 0 0 1 0
...................................................................................................ATCACATTGCTAGGGATTACCAT.......................................................... 23 2 1 3.00 3 0 3 0 0 0 0
...................................................................................................GTCACATTGCCAGGGATTACCAC.......................................................... 23 1 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACACTGCCAGGGATTACCA........................................................... 22 1 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACATTGCGAGGGATTACC............................................................ 21 1 1 3.00 3 0 1 0 0 2 0
......................................................................................................ACATTGCCAGGGATTACTAC.......................................................... 20 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCACCT........................................................ 25 2 1 3.00 3 0 1 1 1 0 0
...................................................................................................ATCACATAGCCAGGGATTACCA........................................................... 22 1 1 3.00 3 2 1 0 0 0 0
......................................................................................................ACATTGCCAGGGATTACTA........................................................... 19 1 1 3.00 3 0 3 0 0 0 0
..............................................................GGGTTCCTGGCCTGCTGATTT................................................................................................. 21 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCAAA......................................................... 24 2 2 3.00 6 2 4 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCACTC........................................................ 25 1 1 3.00 3 2 1 0 0 0 0
...................................................................................................TTCACATTGCCAGGGATTACCAC.......................................................... 23 1 1 3.00 3 2 0 1 0 0 0
...................................................................................................ATCACAATGCCAGGGATTACCACT......................................................... 24 2 1 3.00 3 1 0 2 0 0 0
....................................................................................................TCACATTGCCAGGGATTACCACTA........................................................ 24 2 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACATTCCCAGGGATTACC............................................................ 21 1 1 3.00 3 2 0 0 0 0 1
..............................................................GGGTTCCTGGCATGCTGATTTAA............................................................................................... 23 2 1 3.00 3 0 3 0 0 0 0
..............................................................GGGGTCCTGGCATGCTGATT.................................................................................................. 20 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGTTTACCA........................................................... 22 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGCATTACC............................................................ 21 1 1 3.00 3 1 1 0 0 1 0
...................................................................................................ATCACATTGCCATGGATTACC............................................................ 21 1 1 3.00 3 0 2 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTAGT............................................................ 21 2 2 3.00 6 3 3 0 0 0 0
...................................................................................................CTCACATTGCCAGGGATTACC............................................................ 21 1 1 3.00 3 0 3 0 0 0 0
.....................................................................................................CACATTGCCAGGGATTACCAT.......................................................... 21 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTGCCACT......................................................... 24 2 2 3.00 6 3 1 2 0 0 0
...................................................................................................ATCACATGGCCAGGGATTACC............................................................ 21 1 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACATTGACAGGGATTACCA........................................................... 22 1 1 3.00 3 1 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGGCTTACCAT.......................................................... 23 2 1 3.00 3 1 1 0 0 1 0
......................................................................................................ACATTGCCAGGGATTACCACTT........................................................ 22 2 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACGA........................................................... 22 1 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCTGGGATTACCA........................................................... 22 1 1 3.00 3 1 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTATCAT.......................................................... 23 2 1 3.00 3 0 3 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACGACT......................................................... 24 2 1 3.00 3 1 1 0 0 1 0
...................................................................................................ATCACATTGCCTGGGATTACCACT......................................................... 24 2 1 3.00 3 3 0 0 0 0 0
...................................................................................................ATCTCATTGCCAGGGATTACC............................................................ 21 1 1 3.00 3 2 0 0 0 1 0
...................................................................................................ATCACATTGCCAGGCATTACCAC.......................................................... 23 1 1 3.00 3 1 1 1 0 0 0
...................................................................................................ATCACATTGCCAGGAATTACCA........................................................... 22 1 1 3.00 3 1 1 1 0 0 0
...................................................................................................ATCACATAGCCAGGGATTACCACT......................................................... 24 2 1 3.00 3 2 1 0 0 0 0
...................................................................................................ATCACATTGCAAGGGATTACCA........................................................... 22 1 1 3.00 3 1 1 0 0 1 0
................................................................................................ATTATCACATTGCCAGGGATTTCCA........................................................... 25 3 3 3.00 9 3 0 6 0 0 0
...................................................................................................ATCACATTCCCAGGGATTACCA........................................................... 22 1 1 3.00 3 2 0 1 0 0 0
...................................................................................................ATCACATTGCCCGGGATTACCAT.......................................................... 23 2 1 3.00 3 1 2 0 0 0 0
...................................................................................................ATCACATTTCCAGGGATTACCAC.......................................................... 23 1 1 3.00 3 1 2 0 0 0 0
......................................................................................................ACATTGCCAGGGATTACA............................................................ 18 1 4 2.75 11 0 11 0 0 0 0
....................................................................................................TCACATTGCCAGGGATTACCATTT........................................................ 24 3 3 2.67 8 1 6 1 0 0 0
...................................................................................................ATCACATTGCCAGGGATTGCC............................................................ 21 1 2 2.50 5 2 1 1 0 1 0
...................................................................................................ATCACATTGCCAGGGATTCCAA........................................................... 22 2 2 2.50 5 1 3 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTATTA........................................................... 22 2 2 2.50 5 0 5 0 0 0 0
.............................................................TGGGTTCTTGGCATGCTGATT.................................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
..............................................................GGGTTCCTGGCATGCTGCTTT................................................................................................. 21 1 1 2.00 2 0 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACCACCA........................................................ 25 2 1 2.00 2 2 0 0 0 0 0
...................................................................................................ATCACATTGCCAGGGATTACCAGT......................................................... 24 2 2 2.00 4 2 1 1 0 0 0
......................................................................................................ACATTGCCCGGGATTACCAC.......................................................... 20 1 1 2.00 2 0 2 0 0 0 0
...................................................................................................ATCACTTTGCCAGGGATTACC............................................................ 21 1 1 2.00 2 0 1 0 0 1 0
..................................................................................................AATCACATTGCCAGGGATA............................................................... 19 1 2 2.00 4 0 4 0 0 0 0
.................................................................................................CTATCACATTGCCAGGGATTACCA........................................................... 24 2 1 2.00 2 0 2 0 0 0 0
.....................................................................................................CACATTGCCAGGGATTACCA........................................................... 20 0 1 2.00 2 0 0 0 0 2 0
.............................................................TGGGTCCCTGGCATGCTGATTT................................................................................................. 22 1 1 2.00 2 0 1 0 0 1 0
............................................................TTGGGTTCCTGGCATGCTGATTA................................................................................................. 23 1 1 2.00 2 0 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTACCGT.......................................................... 23 2 1 2.00 2 0 2 0 0 0 0
...................................................................................................GTCACATTGCCAGGGATTACCACA......................................................... 24 2 1 2.00 2 1 1 0 0 0 0
...................................................................................................ATCACATTGCCATGGATTACCAC.......................................................... 23 1 1 2.00 2 0 1 1 0 0 0
...................................................................................................ATCACATAGCCAGGGATTACCAC.......................................................... 23 1 1 2.00 2 2 0 0 0 0 0
......................................................................................................ACATTGCCAGGGATTACCACG......................................................... 21 0 1 2.00 2 0 2 0 0 0 0
....................................................................................................TCATATTGCCAGGGATTACCACT......................................................... 23 2 1 2.00 2 1 1 0 0 0 0
...................................................................................................ATCACAATGCCAGGGATTACCA........................................................... 22 1 1 2.00 2 1 1 0 0 0 0
...................................................................................................ATCACATTCCCAGGGATTAC............................................................. 20 1 1 2.00 2 0 1 0 0 1 0
...................................................................................................ATCACATTGCCAGGGATTCCCAT.......................................................... 23 2 2 2.00 4 1 2 1 0 0 0
......................................................................................................ACATTGCCAGGGATTACCATA......................................................... 21 2 1 2.00 2 0 0 1 0 1 0
...................................................................................................ATCACATTGCCAGCGATTACCA........................................................... 22 1 1 2.00 2 0 2 0 0 0 0
.........................................................................................................TTGCCAGGGATTACCAC.......................................................... 17 0 1 2.00 2 1 1 0 0 0 0
......................................................................................................ACATTGCCAGGGATCACCAC.......................................................... 20 1 1 2.00 2 0 2 0 0 0 0

Anti-sense strand reads

CAGGCTCCTTGGGCGCCGCACGCTACACCCGTCGCCGCGACGGGGCTCACGAGACCGACGAACCCAAGGACCGTACGACTAAACACTGAATTCTAATTTTAGTGTAACGGTCCCTAATGGTGCGTCGGTGCTGGGACCGACGAGGAGGTCTTCGGTATCAATGGGAGAGAGACGTCACGC

********************************************.....(((((((((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))))))).))....**********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:22 AM