ID:ssc-mir-212 |
Coordinate:chr12:50016151-50016232 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -43.3 | -42.7 |
 |
 |
|
AGAGCAGTGGTGCCCCCAGCTGCGGGAGATGGAGCCACCACGCCCGGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCCTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCCCGCCCCAGGACCGCGGACCCGGCCACCAGCCGCGCCCCCGGCCCAT
*********************************************((((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).)))).********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR1274763 ovary |
SRR139075 testes |
SRR066810 testes |
SRR139076 testes |
SRR1274764 testes |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................TAACAGTCTCCAGTCACGGCCA............................................................ | 22 | 0 | 1 | 126.00 | 126 | 73 | 19 | 21 | 7 | 5 | 1 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCC............................................................. | 21 | 0 | 1 | 93.00 | 93 | 35 | 43 | 3 | 5 | 1 | 6 |
| ............................................................ACCTTGGCTCTAGACTGCTTACT................................................................................................... | 23 | 0 | 1 | 70.00 | 70 | 47 | 6 | 7 | 6 | 3 | 1 |
| ....................................................................................................TAACAGTCTCCAGTCACGGC.............................................................. | 20 | 0 | 1 | 38.00 | 38 | 24 | 9 | 1 | 2 | 0 | 2 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAT........................................................... | 23 | 1 | 1 | 30.00 | 30 | 15 | 2 | 9 | 1 | 2 | 1 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCACT.......................................................... | 24 | 1 | 1 | 28.00 | 28 | 8 | 20 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCT............................................................ | 22 | 1 | 1 | 27.00 | 27 | 23 | 4 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCA............................................................. | 21 | 1 | 1 | 24.00 | 24 | 21 | 0 | 2 | 1 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAC........................................................... | 23 | 0 | 1 | 20.00 | 20 | 11 | 8 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGG............................................................... | 19 | 0 | 1 | 12.00 | 12 | 9 | 0 | 0 | 1 | 1 | 1 |
| ............................................................ACCTTGGCTCTAGACTGCTTACTG.................................................................................................. | 24 | 0 | 1 | 11.00 | 11 | 6 | 2 | 1 | 2 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCATT.......................................................... | 24 | 2 | 2 | 7.50 | 15 | 9 | 5 | 0 | 0 | 0 | 1 |
| ....................................................................................................TAACAGTCTCCAGTCACGGA.............................................................. | 20 | 1 | 1 | 7.00 | 7 | 6 | 0 | 0 | 0 | 0 | 1 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCAA............................................................ | 22 | 1 | 1 | 7.00 | 7 | 4 | 1 | 1 | 0 | 1 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAAA.......................................................... | 24 | 2 | 1 | 6.00 | 6 | 0 | 1 | 0 | 0 | 5 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAAT.......................................................... | 24 | 2 | 1 | 6.00 | 6 | 5 | 1 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTTAC.................................................................................................... | 22 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTTACTGT................................................................................................. | 25 | 1 | 1 | 5.00 | 5 | 2 | 0 | 1 | 0 | 2 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAA........................................................... | 23 | 1 | 1 | 3.00 | 3 | 2 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................GTAACAGTCTCCAGTCACGGCCA............................................................ | 23 | 0 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 |
| .............................................................CCTTGGCTCTAGACTGCTTACTG.................................................................................................. | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................AACAGTCTCCAGTCACGGCCA............................................................ | 21 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAGA.......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCACA.......................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGT.............................................................. | 20 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGTA............................................................. | 21 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTTATT................................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................GTAACAGTCTCCAGTCACGGCA............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTA...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCGTGGCC............................................................. | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTTACGGCCA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................CTAACAGTCTCCAGTCACGGCC............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCTT........................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTTACTA.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCAT............................................................ | 22 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGAA............................................................. | 21 | 2 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCACTT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAATT......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCCGTCACGGCCA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCATG.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGGCTGCTTACTG.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAGT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGTTCTAGACTGCTTACT................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............................................................ACCTTGGCCCTCGACTGCTTACT................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAAGA......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................GTAACAGTCTCCAGTCACGGCC............................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTTA..................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTTCAGTCACGGCC............................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAG........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACCTTGGCTCTAGACTGCTT...................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCCC........................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAAC.......................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCACTAA........................................................ | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CCTTGGCTCTAGACTGCTTACT................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................AACAGTCCCCAGTCACGGCCAT........................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................AGTCTCCAGTCACGGCA............................................................. | 17 | 1 | 4 | 0.50 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCTAT.......................................................... | 24 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCAATA......................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCAC................................................................. | 17 | 0 | 4 | 0.50 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCTAGTCACGGCCA............................................................ | 22 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGTCTCCAGTCACGGCCATTT......................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................CTCTAGACTGCTTAC.................................................................................................... | 15 | 0 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
TCTCGTCACCACGGGGGTCGACGCCCTCTACCTCGGTGGTGCGGGCCCGTCGCGCGGCCGTGGAACCGAGATCTGACGAATGACGGGCCCGGCGGGAGTCATTGTCAGAGGTCAGTGCCGGTGGCTGCGGACCGGGGCGGGGTCCTGGCGCCTGGGCCGGTGGTCGGCGCGGGGGCCGGGTA
*********************************************((((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).)))).********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139076 testes |
SRR066810 testes |
SRR066809 ovary |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................AGGCGGGAGTCATTGTCAGAGGTCAGT.................................................................. | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................................................................GGTGGTTGCGGACCGGG.............................................. | 17 | 1 | 20 | 0.15 | 3 | 0 | 2 | 1 |
| .............................................................................................................................................................CGGTGGTAGGCGCGAGGCCCGG... | 22 | 3 | 10 | 0.10 | 1 | 0 | 1 | 0 |
| ......................................................................................................................CGGTGGCTGCGGGCCGG............................................... | 17 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 09/01/2015 at 11:25 AM