ID:

ssc-mir-202

 Coordinate:

chr14:153169585-153169664 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

ACCTGGCCCGACCGTCCTGGCACCTGCGCCTCGTGGGCCCCGCAGCCGCTCGCCGTTCCGCCTTCCTATGCATATACTTCTTTGAGGGTCTGGCCTGAAGAGGTGTAGGCATGGGAAACCGGGGCGACGAGGTCTTCCCACGCCGCAGAGCCCGCCACGGCCTCCACCGCGCCTGGACCT

***********************************************.((((.(((((((..(((((((((.(((((((((((.(((......)))))))))))))).)))))))))..))))))).))))...********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR139076

testes		 SRR066810

testes		 SRR066809

ovary		 SRR1274764

testes		 SRR1274763

ovary
..............................................................TTCCTATGCATATACTTCTTT................................................................................................. 21 0 1 357806.00 357806 282565 57670 10241 6528 484 318
..............................................................TTCCTATGCATATACTTCTT.................................................................................................. 20 0 1 39495.00 39495 31121 6250 1234 701 113 76
..................................................................................................AGAGGTGTAGGCATGGGAAAC............................................................. 21 0 1 22839.00 22839 20751 1828 28 60 93 79
.............................................................CTTCCTATGCATATACTTCTTT................................................................................................. 22 0 1 22071.00 22071 14688 4981 1234 1019 75 74
..................................................................................................AGAGGTGTAGGCATGGGAAA.............................................................. 20 0 1 21101.00 21101 19573 1427 6 12 48 35
..................................................................................................AGAGGTGTAGGCATGGGAA............................................................... 19 0 1 8700.00 8700 8154 494 3 9 15 25
.................................................................CTATGCATATACTTCTTT................................................................................................. 18 0 1 8501.00 8501 7146 1240 50 65 0 0
..............................................................TTCTTATGCATATACTTCTTT................................................................................................. 21 1 1 8316.00 8316 6889 1413 3 11 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACC............................................................ 22 0 1 7525.00 7525 5507 1806 9 7 160 36
..............................................................TTCCTATGCATATACTTCTTTA................................................................................................ 22 1 1 6320.00 6320 5330 799 121 57 11 2
...............................................................TCCTATGCATATACTTCTTT................................................................................................. 20 0 1 6103.00 6103 5354 648 57 43 1 0
...............................................................TCTTATGCATATACTTCTTT................................................................................................. 20 1 1 4578.00 4578 4053 523 2 0 0 0
..............................................................TTCCTATGCATATACTTCT................................................................................................... 19 0 1 4490.00 4490 3420 403 486 93 68 20
.............................................................CTTCCTATGCATATACTTCTT.................................................................................................. 21 0 1 3277.00 3277 2082 712 223 209 24 27
............................................................CCTTCCTATGCATATACTTCTT.................................................................................................. 22 0 1 2790.00 2790 1600 532 219 398 11 30
..............................................................TTCCTATGCATATACTTCTTTT................................................................................................ 22 1 1 2753.00 2753 2273 368 69 30 6 7
...............................................................................................TGAAGAGGTGTAGGCATGGGAA............................................................... 22 0 1 2699.00 2699 2493 192 0 7 3 4
..................................................................................................AGAGGTGTAGGCATGGGAAT.............................................................. 20 1 1 2622.00 2622 2423 184 4 2 7 2
..................................................................................................AGAGGTGTAGGCATGGGA................................................................ 18 0 1 2189.00 2189 2121 57 0 2 5 4
..................................................................................................AGAGGTGTAGGCATGGGAAACA............................................................ 22 1 1 1899.00 1899 1813 79 1 3 0 3
..................................................................................................AGAGGTGTAGGCATGGGAAAA............................................................. 21 1 1 1814.00 1814 1746 61 0 0 2 5
..................................................................................................AGAGGTGTAGGCATGGGAAACT............................................................ 22 1 1 1618.00 1618 1429 118 1 0 20 50
..................................................................................................AGAGGTGTAGGCATGGGAAACCA........................................................... 23 1 1 1475.00 1475 879 529 4 1 55 7
.................................................................................................AAGAGGTGTAGGCATGGGAAA.............................................................. 21 0 1 1440.00 1440 1360 73 1 0 3 3
.................................................................................................AAGAGGTGTAGGCATGGGAA............................................................... 20 0 1 1397.00 1397 1302 89 1 2 1 2
...............................................................................................TGAAGAGGTGTAGGCATGGGA................................................................ 21 0 1 1348.00 1348 1265 72 2 4 5 0
..............................................................TTCCTATGTATATACTTCTTT................................................................................................. 21 1 1 1343.00 1343 1123 203 11 3 2 1
...............................................................................................TGAAGAGGTGTAGGCATGGGAAA.............................................................. 23 0 1 1325.00 1325 1189 132 0 1 1 2
..............................................................TTTCTATGCATATACTTCTTT................................................................................................. 21 1 3 1223.00 3669 3074 583 6 6 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAAT............................................................. 21 1 1 1193.00 1193 1101 85 1 0 2 4
............................................................CCTTCCTATGCATATACTTCTTT................................................................................................. 23 0 1 1132.00 1132 537 409 83 92 3 8
..............................................................TTCTTATGCATATACTTCTT.................................................................................................. 20 1 1 1127.00 1127 911 215 0 1 0 0
..............................................................TTCCTATGCATATACTTCCTT................................................................................................. 21 1 1 1090.00 1090 914 151 17 7 0 1
..............................................................TTCCTATGCATATACTT..................................................................................................... 17 0 1 1015.00 1015 925 90 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAAC............................................................. 22 0 1 912.00 912 863 45 0 0 1 3
.................................................................CTATGCATATACTTCTT.................................................................................................. 17 0 1 897.00 897 735 140 6 16 0 0
..............................................................TTCCTATGCATATACTTCTTTG................................................................................................ 22 0 1 821.00 821 694 79 26 18 2 2
..............................................................TTCCTATGCATATACTTCTTA................................................................................................. 21 1 2 806.50 1613 1248 267 65 26 4 3
..............................................................TTCCTATGCATATACTTT.................................................................................................... 18 1 20 805.95 16119 14698 1419 1 1 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAAT.............................................................. 23 1 1 766.00 766 712 44 3 6 1 0
..............................................................TTCCTATGCATATCCTTCTTT................................................................................................. 21 1 1 763.00 763 647 115 1 0 0 0
............................................................CCTTCCTATGCATATACTTCT................................................................................................... 21 0 1 695.00 695 345 134 99 106 7 4
..............................................................TTCCTATGCATATACTTCTTTAA............................................................................................... 23 1 1 691.00 691 566 105 14 5 1 0
...............................................................TCCTATGCATATACTTCTT.................................................................................................. 19 0 1 683.00 683 606 62 9 6 0 0
..............................................................TTCCTATGCACATACTTCTTT................................................................................................. 21 1 2 658.00 1316 1079 232 4 1 0 0
..............................................................TTCCTATGCATATACTTTTTT................................................................................................. 21 1 2 628.00 1256 1046 204 2 4 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACAA........................................................... 23 2 1 628.00 628 604 23 0 0 0 1
..............................................................CTCCTATGCATATACTTCTTT................................................................................................. 21 1 1 512.00 512 377 124 8 3 0 0
.............................................................ATTCCTATGCATATACTTCTTT................................................................................................. 22 1 1 495.00 495 276 218 1 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGA................................................................ 19 0 1 461.00 461 435 24 0 0 1 1
.............................................................CTTCCTATGCATATACTTCT................................................................................................... 20 0 1 443.00 443 247 76 91 17 6 6
..............................................................TTCCTCTGCATATACTTCTTT................................................................................................. 21 1 1 428.00 428 356 71 1 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAT............................................................... 19 1 1 420.00 420 404 13 1 0 0 2
..............................................................TTCCTATGCATCTACTTCTTT................................................................................................. 21 1 1 418.00 418 347 69 1 1 0 0
..............................................................TTCCTATGCATATACTTTT................................................................................................... 19 1 11 404.82 4453 3965 485 3 0 0 0
..............................................................TTCCTATGCATATACTTCTCT................................................................................................. 21 1 1 391.00 391 320 68 1 2 0 0
..................................................................TATGCATATACTTCTTT................................................................................................. 17 0 3 371.67 1115 1051 63 1 0 0 0
..............................................................ATCCTATGCATATACTTCTTT................................................................................................. 21 1 1 339.00 339 235 86 12 6 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCG........................................................... 23 0 1 321.00 321 297 20 1 0 0 3
...............................................................................................TGAAGAGGTGTAGGCATGGGAT............................................................... 22 1 1 315.00 315 294 20 0 1 0 0
..............................................................TTCCTATGCATATACTTTTT.................................................................................................. 20 1 4 307.00 1228 1051 175 1 1 0 0
..............................................................TTCCTATGCATATATTTCTTT................................................................................................. 21 1 3 299.00 897 740 149 4 4 0 0
..............................................................TTCCTATGCATATACTTCTTTGA............................................................................................... 23 0 1 290.00 290 170 23 40 52 1 4
..............................................................TTCCTATGCCTATACTTCTTT................................................................................................. 21 1 1 280.00 280 220 60 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAG.............................................................. 20 1 1 275.00 275 264 7 0 0 0 4
..............................................................TTCCTATGCGTATACTTCTTT................................................................................................. 21 1 1 267.00 267 206 53 4 4 0 0
..............................................................TTCCTATGCATATACCTCTTT................................................................................................. 21 1 1 266.00 266 209 49 4 4 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCAT.......................................................... 24 2 1 265.00 265 169 94 0 1 0 1
..............................................................TCCCTATGCATATACTTCTTT................................................................................................. 21 1 1 262.00 262 228 25 4 4 1 0
...................................................................................................GAGGTGTAGGCATGGGAAACCG........................................................... 22 0 1 261.00 261 251 10 0 0 0 0
..............................................................TTCCTATGCATATACTTC.................................................................................................... 18 0 1 254.00 254 224 19 2 5 4 0
.............................................................CTTCTTATGCATATACTTCTTT................................................................................................. 22 1 1 253.00 253 197 55 0 1 0 0
..............................................................TTCCTACGCATATACTTCTTT................................................................................................. 21 1 1 248.00 248 206 39 2 0 0 1
................................................................CTTATGCATATACTTCTTT................................................................................................. 19 1 4 243.50 974 824 148 1 1 0 0
..............................................................TTCCTATGCATATACTACTTT................................................................................................. 21 1 2 225.00 450 379 65 6 0 0 0
..............................................................TTCCTATGCATATACTCCTTT................................................................................................. 21 1 1 221.00 221 177 36 5 3 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAT.............................................................. 21 1 1 217.00 217 203 14 0 0 0 0
...............................................................TCTTATGCATATACTTCTT.................................................................................................. 19 1 3 216.33 649 583 65 0 1 0 0
...................................................................................................GAGGTGTAGGCATGGGAAA.............................................................. 19 0 1 212.00 212 205 7 0 0 0 0
.............................................................CTTCCTATGCATATACTTCTTTA................................................................................................ 23 1 1 207.00 207 129 53 12 11 1 1
...................................................................................................GAGGTGTAGGCATGGGAAAC............................................................. 20 0 1 190.00 190 178 12 0 0 0 0
...............................................................TTCTATGCATATACTTCTTT................................................................................................. 20 1 5 189.40 947 825 120 1 1 0 0
................................................................................................GAAGAGGTGTAGGCATGGGAA............................................................... 21 0 1 182.00 182 173 9 0 0 0 0
..............................................................TTCCTGTGCATATACTTCTTT................................................................................................. 21 1 1 181.00 181 147 31 1 2 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAAA............................................................. 22 1 1 180.00 180 173 5 0 1 0 1
..............................................................TTCCCATGCATATACTTCTTT................................................................................................. 21 1 1 179.00 179 145 30 4 0 0 0
.............................................................CTTTCTATGCATATACTTCTTT................................................................................................. 22 1 1 178.00 178 130 46 0 2 0 0
.................................................................TTATGCATATACTTCTTT................................................................................................. 18 1 20 175.70 3514 3514 0 0 0 0 0
..............................................................TACCTATGCATATACTTCTTT................................................................................................. 21 1 1 174.00 174 160 13 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAAAA............................................................ 22 2 2 173.50 347 335 11 0 0 0 1
..............................................................TTCCTATGCATGTACTTCTTT................................................................................................. 21 1 1 167.00 167 138 19 7 3 0 0
..............................................................TTCCTATGCATACACTTCTTT................................................................................................. 21 1 1 158.00 158 131 24 2 1 0 0
..................................................................................................AGCGGTGTAGGCATGGGAAAC............................................................. 21 1 1 152.00 152 142 10 0 0 0 0
..................................................................................................AGAGGTGGAGGCATGGGAAAC............................................................. 21 1 1 152.00 152 148 4 0 0 0 0
..............................................................TTCCTATTCATATACTTCTTT................................................................................................. 21 1 2 141.50 283 233 48 1 0 1 0
...............................................................................................TGAAGAGGTGTAGGCATGGG................................................................. 20 0 1 141.00 141 132 9 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCT........................................................... 23 1 1 136.00 136 94 26 0 0 9 7
..................................................................................................AGAGGTGTAGGCATGGGACAC............................................................. 21 1 1 133.00 133 119 14 0 0 0 0
.............................................................TTTCCTATGCATATACTTCTTT................................................................................................. 22 1 2 133.00 266 218 40 6 2 0 0
..................................................................................................AGCGGTGTAGGCATGGGAAA.............................................................. 20 1 1 129.00 129 126 3 0 0 0 0
..............................................................TTCCTATGCATATACTCCTT.................................................................................................. 20 1 2 126.00 252 212 40 0 0 0 0
................................................................CCTATGCATATACTTCTTT................................................................................................. 19 0 1 125.00 125 105 18 1 1 0 0
..............................................................TTCCTATGCATATGCTTCTTT................................................................................................. 21 1 1 123.00 123 95 26 1 1 0 0
..............................................................TTCCTATGCATATACTTCTTC................................................................................................. 21 1 2 115.50 231 176 40 12 3 0 0
.............................................................CTTCCTATGCATATACTTT.................................................................................................... 19 1 7 114.29 800 682 118 0 0 0 0
................................................................................................GAAGAGGTGTAGGCATGGGAAA.............................................................. 22 0 1 110.00 110 103 7 0 0 0 0
..............................................................GTCCTATGCATATACTTCTTT................................................................................................. 21 1 1 108.00 108 97 7 3 1 0 0
.............................................................CTTCCTATGCATATACTTCTTTT................................................................................................ 23 1 1 104.00 104 73 19 7 4 0 1
..................................................................................................AGAGGTGTAGGCATGGGAAACTT........................................................... 23 2 1 103.00 103 99 4 0 0 0 0
..............................................................TTTCTATGCATATACTTCTT.................................................................................................. 20 1 4 101.00 404 310 92 0 2 0 0
..............................................................TTCCTATGCATATAGTTCTTT................................................................................................. 21 1 1 100.00 100 85 15 0 0 0 0
..................................................................................................AGAGGCGTAGGCATGGGAAAC............................................................. 21 1 1 94.00 94 80 14 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGG................................................................. 17 0 1 93.00 93 91 1 0 0 1 0
..............................................................TTCCTATGCATATCCTTCTT.................................................................................................. 20 1 1 93.00 93 77 16 0 0 0 0
...................................................................................................GAGGTGTAGGCATGGGAA............................................................... 18 0 1 91.00 91 87 4 0 0 0 0
...............................................................TCCTATGCATATACTTCTTTA................................................................................................ 21 1 1 90.00 90 80 8 1 1 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAT............................................................... 20 1 1 87.00 87 84 3 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACTA........................................................... 23 2 1 87.00 87 84 2 0 1 0 0
............................................................CCTTCCTATGCATATACTTT.................................................................................................... 20 1 1 86.00 86 74 12 0 0 0 0
..............................................................TTCCTATGCATATACTTCTA.................................................................................................. 20 1 1 84.00 84 62 20 0 1 1 0
..............................................................TTCCTATGGATATACTTCTTT................................................................................................. 21 1 1 84.00 84 68 15 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAATT............................................................. 21 2 3 83.67 251 213 37 0 0 0 1
..............................................................TTCTTATGCATATACTTCTTTA................................................................................................ 22 2 3 83.33 250 216 34 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACG............................................................ 22 1 1 79.00 79 74 2 0 1 0 2
.............................................................CTTCCTATGCACATACTTCTTT................................................................................................. 22 1 1 77.00 77 59 17 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAC.............................................................. 20 1 1 77.00 77 69 5 1 2 0 0
..............................................................TTCCTAAGCATATACTTCTTT................................................................................................. 21 1 1 75.00 75 59 14 0 2 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAAT............................................................. 22 1 1 75.00 75 72 3 0 0 0 0
..............................................................TTCCTATGCATATACCTCTT.................................................................................................. 20 1 2 74.50 149 129 20 0 0 0 0
.............................................................CTTCCTATGCATATACTTTTTT................................................................................................. 22 1 1 74.00 74 52 20 1 1 0 0
..............................................................TTCCTATGCATATACTTCTTG................................................................................................. 21 1 1 73.00 73 59 9 3 1 1 0
..................................................................................................AGAGGCGTAGGCATGGGAAA.............................................................. 20 1 1 71.00 71 52 19 0 0 0 0
..............................................................TTCCTATGCATTTACTTCTTT................................................................................................. 21 1 1 71.00 71 47 21 2 1 0 0
..............................................................TTCGTATGCATATACTTCTTT................................................................................................. 21 1 1 70.00 70 56 13 1 0 0 0
.............................................................CTTCCTATGTATATACTTCTTT................................................................................................. 22 1 1 70.00 70 55 13 2 0 0 0
...................................................................................................GAGGTGTAGGCATGGGAAACC............................................................ 21 0 1 70.00 70 54 15 0 0 1 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCAA.......................................................... 24 2 1 69.00 69 47 22 0 0 0 0
............................................................AATTCCTATGCATATACTTCTTT................................................................................................. 23 2 1 67.00 67 41 25 0 1 0 0
..................................................................................................AGAGGTGGAGGCATGGGAAA.............................................................. 20 1 2 66.50 133 131 2 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGATA.............................................................. 20 1 1 66.00 66 65 1 0 0 0 0
..............................................................TTCCTATGCATATACTTCTTAA................................................................................................ 22 2 3 65.33 196 145 42 8 1 0 0
.............................................................CTTCCTATGCATATACTTCCTT................................................................................................. 22 1 1 64.00 64 46 18 0 0 0 0
...............................................................TCCTATGCATATACTTCT................................................................................................... 18 0 1 63.00 63 55 7 0 1 0 0
................................................................................................GAAGAGGTGTAGGCATGGGA................................................................ 20 0 1 62.00 62 58 4 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAACA............................................................ 23 1 1 61.00 61 61 0 0 0 0 0
.............................................................CTTCCTATGCATATACTT..................................................................................................... 18 0 1 61.00 61 49 11 0 1 0 0
..............................................................CTCCTATGCATATACTTCTT.................................................................................................. 20 1 1 61.00 61 42 19 0 0 0 0
...............................................................TCCTATGCATATACTTCTTTT................................................................................................ 21 1 1 61.00 61 53 7 0 1 0 0
..............................................................TTCCTATCCATATACTTCTTT................................................................................................. 21 1 2 60.50 121 98 19 1 2 1 0
................................................................TCTATGCATATACTTCTTT................................................................................................. 19 1 7 60.29 422 378 42 1 1 0 0
..............................................................TTGCTATGCATATACTTCTTT................................................................................................. 21 1 1 60.00 60 45 11 3 1 0 0
.............................................................CTTCCTATGCATATCCTTCTTT................................................................................................. 22 1 1 59.00 59 40 19 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACGA........................................................... 23 2 1 59.00 59 59 0 0 0 0 0
.............................................................CTTCCTATGCATATACTTTT................................................................................................... 20 1 4 58.25 233 194 39 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAAAT............................................................. 24 1 1 58.00 58 51 6 0 0 1 0
.............................................................CTTCCTATGCATATATTTCTTT................................................................................................. 22 1 1 58.00 58 41 15 1 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAAG............................................................. 21 1 1 58.00 58 55 3 0 0 0 0
..............................................................TTCCTATGCTTATACTTCTTT................................................................................................. 21 1 3 57.33 172 137 32 1 1 0 1
..............................................................TTCTTATGCATATACTTCT................................................................................................... 19 1 2 56.00 112 101 11 0 0 0 0
.................................................................CTATGCATATACTTCT................................................................................................... 16 0 2 54.50 109 97 10 1 1 0 0
.............................................................ATTCCTATGCATATACTTCTTTA................................................................................................ 23 2 1 54.00 54 32 22 0 0 0 0
..............................................................TTCCTATGCACATACTTCTT.................................................................................................. 20 1 3 53.00 159 119 38 1 1 0 0
..............................................................TTCCTATGCATAAACTTCTTT................................................................................................. 21 1 1 53.00 53 41 9 2 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAGA.............................................................. 20 1 1 53.00 53 51 2 0 0 0 0
..............................................................TTCCTATGCATATACTTATTT................................................................................................. 21 1 1 53.00 53 38 14 1 0 0 0
..............................................................TTCCTATGTATATACTTCTT.................................................................................................. 20 1 3 53.00 159 126 26 4 1 2 0
................................................................................................GAAGAGGTGTAGGCATGGGAAT.............................................................. 22 1 1 52.00 52 52 0 0 0 0 0
............................................................CCTTCCTATGCATATACTTC.................................................................................................... 20 0 1 51.00 51 20 11 11 9 0 0
.............................................................ATTCCTATGCATATACTTCTT.................................................................................................. 21 1 1 51.00 51 24 27 0 0 0 0
..............................................................TTCCTATGAATATACTTCTTT................................................................................................. 21 1 1 50.00 50 33 16 1 0 0 0
..............................................................TTCCTATGCATATACTTCCT.................................................................................................. 20 1 1 50.00 50 41 8 1 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAAG.............................................................. 23 1 1 50.00 50 47 3 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGG.................................................................. 19 0 1 50.00 50 49 1 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGAAA............................................................... 19 1 1 48.00 48 47 1 0 0 0 0
.............................................................CTTCCTCTGCATATACTTCTTT................................................................................................. 22 1 1 47.00 47 34 13 0 0 0 0
..................................................................................................AGCGGTGTAGGCATGGGAAACC............................................................ 22 1 1 47.00 47 38 9 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGCAA.............................................................. 20 1 1 47.00 47 35 12 0 0 0 0
..............................................................TTCCTATGCATATACTTCTTTAT............................................................................................... 23 2 1 47.00 47 36 5 2 3 0 1
..................................................................................................AGAGGTGTAGGCATGGGAAAAT............................................................ 22 2 2 46.50 93 90 2 0 1 0 0
............................................................CCTTCCTATGCATATACTT..................................................................................................... 19 0 1 46.00 46 30 9 5 1 1 0
................................................................CCTATGCATATACTTCTT.................................................................................................. 18 0 1 46.00 46 36 9 0 1 0 0
.............................................................CTTCCTATGCATATACTTCTTA................................................................................................. 22 1 2 45.50 91 59 22 8 1 1 0
...............................................................................................TGAAGAGGTGTAGGCATGGGATT.............................................................. 23 2 1 45.00 45 43 2 0 0 0 0
.............................................................CATCCTATGCATATACTTCTTT................................................................................................. 22 1 1 45.00 45 34 11 0 0 0 0
..................................................................................................AGCGGTGTAGGCATGGGAA............................................................... 19 1 1 45.00 45 45 0 0 0 0 0
..............................................................TTCCTATACATATACTTCTTT................................................................................................. 21 1 3 44.67 134 107 23 1 2 0 1
.................................................................CTATGCATATACTTCTTTA................................................................................................ 19 1 4 43.50 174 155 18 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCGT.......................................................... 24 1 1 43.00 43 40 3 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGCAAC............................................................. 21 1 1 43.00 43 31 12 0 0 0 0
..............................................................TTCCAATGCATATACTTCTTT................................................................................................. 21 1 1 43.00 43 36 7 0 0 0 0
.............................................................CTTCTTATGCATATACTTCTT.................................................................................................. 21 1 1 42.00 42 33 9 0 0 0 0
..............................................................TTCCTATGCATCTACTTCTT.................................................................................................. 20 1 1 42.00 42 37 5 0 0 0 0
................................................................................................GAAGAGGTGTAGGCATGGGAAAC............................................................. 23 0 1 41.00 41 35 5 0 0 0 1
..............................................................TTCCTATGCATATACTTCTC.................................................................................................. 20 1 1 41.00 41 27 11 2 1 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGATA.............................................................. 23 1 1 40.00 40 36 4 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAG............................................................... 19 1 2 40.00 80 78 1 0 0 0 1
............................................................CCTTCCTATGCATATACTTCTTA................................................................................................. 23 1 1 40.00 40 22 10 5 3 0 0
..............................................................TTCCTATGCATATACTTCTGT................................................................................................. 21 1 1 39.00 39 37 1 0 1 0 0
..................................................................................................ATAGGTGTAGGCATGGGAAA.............................................................. 20 1 1 39.00 39 36 3 0 0 0 0
..................................................................................................AGAGGTGCAGGCATGGGAAAC............................................................. 21 1 1 39.00 39 34 5 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGACA.............................................................. 20 1 2 38.50 77 71 6 0 0 0 0
..................................................................................................AGAGGTGGAGGCATGGGAAACC............................................................ 22 1 1 38.00 38 36 2 0 0 0 0
.............................................................CTTCCTATGCATATACTTTTT.................................................................................................. 21 1 2 38.00 76 61 15 0 0 0 0
.............................................................TTTCCTATGCATATACTTCTT.................................................................................................. 21 1 2 37.50 75 52 18 0 5 0 0
...............................................................CCCTATGCATATACTTCTTT................................................................................................. 20 1 1 37.00 37 28 8 1 0 0 0
..................................................................................................AGAGGTGTAGGCCTGGGAAAC............................................................. 21 1 1 37.00 37 35 2 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAAAA............................................................. 24 1 1 37.00 37 32 5 0 0 0 0
..............................................................TTCCTTTGCATATACTTCTTT................................................................................................. 21 1 3 36.67 110 91 17 1 1 0 0
..............................................................TTCCTATGCATATACTTCGTT................................................................................................. 21 1 1 36.00 36 34 2 0 0 0 0
..............................................................TTCTTATGCATATACTTCTTTG................................................................................................ 22 1 1 36.00 36 32 4 0 0 0 0
..................................................................................................AGAGGGGTAGGCATGGGAAAC............................................................. 21 1 1 35.00 35 24 11 0 0 0 0
..................................................................................................GGAGGTGTAGGCATGGGAAAC............................................................. 21 1 1 35.00 35 32 2 0 0 0 1
..............................................................TTCCGATGCATATACTTCTTT................................................................................................. 21 1 1 35.00 35 30 5 0 0 0 0
..............................................................ATCCTATGCATATACTTCTT.................................................................................................. 20 1 1 35.00 35 28 5 1 1 0 0
..............................................................TTCCTATGCATATAATTCTTT................................................................................................. 21 1 2 34.50 69 62 7 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAG............................................................... 22 1 1 34.00 34 32 2 0 0 0 0
..............................................................TGCCTATGCATATACTTCTTT................................................................................................. 21 1 1 34.00 34 29 5 0 0 0 0
..................................................................................................CGAGGTGTAGGCATGGGAAA.............................................................. 20 1 1 34.00 34 34 0 0 0 0 0
..................................................................................................AGAGGTGCAGGCATGGGAAA.............................................................. 20 1 1 33.00 33 31 2 0 0 0 0
..............................................................TTCCTATGCATATACTTCTTTTA............................................................................................... 23 1 1 33.00 33 26 6 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGG.................................................................. 16 0 1 33.00 33 31 2 0 0 0 0
..............................................................TTCCTACGCATATACTTCTT.................................................................................................. 20 1 1 33.00 33 23 9 1 0 0 0
..................................................................................................AGAGGTGTAGGCATGTGAAA.............................................................. 20 1 1 33.00 33 33 0 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAGAC............................................................. 21 1 1 32.00 32 29 3 0 0 0 0
..............................................................TCCCTATGCATATACTTCTT.................................................................................................. 20 1 1 32.00 32 25 7 0 0 0 0
..............................................................TTCCTATGCATATACT...................................................................................................... 16 0 6 32.00 192 185 7 0 0 0 0
..............................................................TTCCTAGGCATATACTTCTTT................................................................................................. 21 1 1 32.00 32 31 1 0 0 0 0
..............................................................TTCCTATGCATATTCTTCTTT................................................................................................. 21 1 3 31.33 94 84 9 0 0 1 0
..................................................................................................AGAGGTGTAGGCATGGGAACC............................................................. 21 1 1 31.00 31 23 8 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAACT............................................................ 23 1 1 31.00 31 30 0 0 0 0 1
............................................................CCTTCTTATGCATATACTTCTT.................................................................................................. 22 1 1 31.00 31 28 2 0 1 0 0
.............................................................CTCCCTATGCATATACTTCTTT................................................................................................. 22 1 1 31.00 31 25 5 0 1 0 0
..................................................................................................AGAGGGGTAGGCATGGGAAA.............................................................. 20 1 1 30.00 30 21 9 0 0 0 0
..................................................................................................AGAGGTGTAGGCATTGGAAAC............................................................. 21 1 1 30.00 30 28 1 0 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACAG........................................................... 23 1 1 30.00 30 29 0 0 0 0 1
..................................................................................................AGAGGTGTAGGCCTGGGAAA.............................................................. 20 1 1 30.00 30 29 1 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCGA.......................................................... 24 1 1 29.00 29 26 2 0 0 0 1
..................................................................................................AGAGGCGTAGGCATGGGAAACC............................................................ 22 1 1 29.00 29 13 16 0 0 0 0
............................................................TCTTCCTATGCATATACTTCTTT................................................................................................. 23 1 1 28.00 28 22 6 0 0 0 0
.................................................................CTATGCATATACTTCTTTG................................................................................................ 19 0 1 28.00 28 27 1 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAATA............................................................ 22 2 2 28.00 56 53 2 0 0 0 1
..............................................................TTCCTATGCATATACTCTTTT................................................................................................. 21 2 12 27.42 329 262 67 0 0 0 0
...................................................................................................GAGGTGTAGGCATGGGAAACCA........................................................... 22 1 1 27.00 27 21 6 0 0 0 0
..............................................................TTCCTATGCATATACTTCATT................................................................................................. 21 1 1 27.00 27 22 5 0 0 0 0
..............................................................TTCCTATGCATATACTTCTAT................................................................................................. 21 1 1 27.00 27 21 3 1 2 0 0
.............................................................CTTCCTATGCATCTACTTCTTT................................................................................................. 22 1 1 27.00 27 19 7 1 0 0 0
..............................................................TTACTATGCATATACTTCTTT................................................................................................. 21 1 1 27.00 27 22 5 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAAC.............................................................. 23 1 1 26.00 26 22 2 1 1 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACAT........................................................... 23 2 2 26.00 52 51 1 0 0 0 0
...............................................................CCCTATGCATATACTTCTT.................................................................................................. 19 1 1 26.00 26 19 7 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGT................................................................ 21 1 1 26.00 26 26 0 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGACACC............................................................ 22 1 1 26.00 26 19 7 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGTAA.............................................................. 20 1 1 26.00 26 26 0 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGG................................................................. 18 0 1 25.00 25 24 1 0 0 0 0
...............................................................TCTTATGCATATACTTCTTTG................................................................................................ 21 1 1 25.00 25 23 2 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGGAAC............................................................. 21 1 1 25.00 25 23 2 0 0 0 0
...................................................................................................GAGGTGTAGGCATGGGAAAA............................................................. 20 1 1 25.00 25 25 0 0 0 0 0
....................................................................................................AGGTGTAGGCATGGGAAACCG........................................................... 21 0 1 25.00 25 22 2 0 0 0 1
..................................................................................................AGAGGTGTAGGCATGGGATAA............................................................. 21 2 2 24.50 49 49 0 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGTGAAAC............................................................. 21 1 1 24.00 24 19 5 0 0 0 0
..............................................................TTCCTATGCATGTACTTCTT.................................................................................................. 20 1 1 24.00 24 20 3 0 1 0 0
....................................................................................................AGGTGTAGGCATGGGAAA.............................................................. 18 0 1 24.00 24 24 0 0 0 0 0
....................................................................................................AGGTGTAGGCATGGGAA............................................................... 17 0 1 24.00 24 24 0 0 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATG................................................................... 18 0 2 24.00 48 48 0 0 0 0 0
..............................................................TTCCTATGCGTATACTTCTT.................................................................................................. 20 1 1 24.00 24 15 9 0 0 0 0
..............................................................TTCCTATGCATATATTTCTT.................................................................................................. 20 1 4 23.50 94 77 14 2 1 0 0
..............................................................TTCCTATGCATATACATCTTT................................................................................................. 21 1 2 23.50 47 40 6 1 0 0 0
..................................................................................................CGAGGTGTAGGCATGGGAAAC............................................................. 21 1 1 23.00 23 23 0 0 0 0 0
.................................................................................................CAGAGGTGTAGGCATGGGAAA.............................................................. 21 1 1 23.00 23 18 5 0 0 0 0
...................................................................................................GAGGTGTAGGCATGGGAAACCGA.......................................................... 23 1 1 23.00 23 22 1 0 0 0 0
..............................................................TTCCTGTGCATATACTTCTT.................................................................................................. 20 1 1 23.00 23 16 5 2 0 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGA................................................................. 20 1 1 23.00 23 23 0 0 0 0 0
..............................................................TTCCTATGCATATACTACTT.................................................................................................. 20 1 2 22.50 45 40 5 0 0 0 0
..............................................................TTCCTATGCATATACGTCTTT................................................................................................. 21 1 1 22.00 22 19 3 0 0 0 0
..............................................................TTCCTATGCATATACTTGTTT................................................................................................. 21 1 2 22.00 44 31 11 2 0 0 0
..................................................................................................AGAGGTGTAGGCATGGAAAA.............................................................. 20 1 1 22.00 22 22 0 0 0 0 0
.............................................................GTTCCTATGCATATACTTCTTT................................................................................................. 22 1 1 22.00 22 15 7 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAACCTT.......................................................... 24 2 1 21.00 21 19 2 0 0 0 0
...................................................................................................GAGGTGTAGGCATGGGA................................................................ 17 0 1 21.00 21 21 0 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAG.............................................................. 21 1 1 21.00 21 19 2 0 0 0 0
..................................................................................................AGGGGTGTAGGCATGGGAAAC............................................................. 21 1 1 21.00 21 17 4 0 0 0 0
..................................................................................................AGAGGCGTAGGCATGGGAA............................................................... 19 1 1 21.00 21 16 5 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAATT............................................................ 22 2 3 20.67 62 58 4 0 0 0 0
..................................................................TATGCATATACTTCTT.................................................................................................. 16 0 7 20.57 144 135 9 0 0 0 0
..............................................................TTCATATGCATATACTTCTTT................................................................................................. 21 1 3 20.33 61 54 6 1 0 0 0
.............................................................TTTCTTATGCATATACTTCTTT................................................................................................. 22 2 8 20.13 161 125 36 0 0 0 0
..................................................................................................AGAGTTGTAGGCATGGGAAA.............................................................. 20 1 1 20.00 20 20 0 0 0 0 0
....................................................................................................AGGTGTAGGCATGGGAAACCGA.......................................................... 22 1 1 20.00 20 19 1 0 0 0 0
.............................................................CTTCCTATGCATATACTTC.................................................................................................... 19 0 1 20.00 20 17 1 1 0 0 1
...............................................................................................TGAAGAGGTGTAGGCATGGAA................................................................ 21 1 1 20.00 20 20 0 0 0 0 0
.............................................................CTTCCTATGCATATACTACTTT................................................................................................. 22 1 1 20.00 20 12 7 0 1 0 0
...............................................................................................TGAAGAGGTGTAGGCATGGGAATT............................................................. 24 2 1 20.00 20 12 7 0 0 0 1
..................................................................................................ATAGGTGTAGGCATGGGAAAC............................................................. 21 1 1 20.00 20 18 2 0 0 0 0
.............................................................CTTCCCATGCATATACTTCTTT................................................................................................. 22 1 1 20.00 20 17 3 0 0 0 0
.............................................................CTTCCTATGCGTATACTTCTTT................................................................................................. 22 1 1 20.00 20 13 7 0 0 0 0
..................................................................................................AGAGGTGTAGGCATGGGAAAGA............................................................ 22 2 2 19.50 39 37 1 0 0 0 1
...............................................................TCTTATGCATATACTTCTTTA................................................................................................ 21 2 9 19.33 174 159 15 0 0 0 0
..............................................................TTCCTATGCATATACTGCTTT................................................................................................. 21 1 1 19.00 19 16 3 0 0 0 0
.................................................................................................AAGAGGTGTAGGCATGGGAAAAA............................................................ 23 2 1 19.00 19 18 0 0 0 0 1
.................................................................................................TAGAGGTGTAGGCATGGGAAA.............................................................. 21 1 1 19.00 19 16 3 0 0 0 0
............................................................CCTTCCTATGCATATACTTTT................................................................................................... 21 1 1 19.00 19 10 9 0 0 0 0

Anti-sense strand reads

TGGACCGGGCTGGCAGGACCGTGGACGCGGAGCACCCGGGGCGTCGGCGAGCGGCAAGGCGGAAGGATACGTATATGAAGAAACTCCCAGACCGGACTTCTCCACATCCGTACCCTTTGGCCCCGCTGCTCCAGAAGGGTGCGGCGTCTCGGGCGGTGCCGGAGGTGGCGCGGACCTGGA

**********************************************.((((.(((((((..(((((((((.(((((((((((.(((......)))))))))))))).)))))))))..))))))).))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:27 AM