ID:ssc-mir-18a |
Coordinate:chr11:66610195-66610286 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -26.7 | -26.6 | -26.5 |
 |
 |
 |
|
GCCTCGGGAAGCCAAGGTGGGCTTGAAAGCGCAGGGTCTGCTGGTGTTGAGTGCTTTTTGTTCTAAGGTGCATCTAGTGCAGATAGTGAAGTAGATTAGCATCTACTGCCCTAAGTGCTCCTTCTGGCATAAGAAGTTATGTTTTCATCCAATAATCCAAGCCAAGCAAGTATATAGGTGTTTTAATACTTT
************************************************....(((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).))))))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR066810 testes |
SRR139075 testes |
SRR1274763 ovary |
SRR1274764 testes |
SRR139076 testes |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................TAAGGTGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 1 | 1 | 1312.00 | 1312 | 612 | 699 | 0 | 0 | 1 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAG.......................................................................................................... | 23 | 0 | 1 | 618.00 | 618 | 317 | 267 | 13 | 9 | 10 | 2 |
| ...............................................................TAAGGTGCATCTAGTGCAGATA........................................................................................................... | 22 | 0 | 1 | 613.00 | 613 | 288 | 278 | 33 | 5 | 6 | 3 |
| ...............................................................TAAGGTGCATCTAGTGCAGAT............................................................................................................ | 21 | 0 | 1 | 448.00 | 448 | 134 | 118 | 172 | 7 | 3 | 14 |
| ...............................................................TAAGGTGCATCTAGTGCAGA............................................................................................................. | 20 | 0 | 1 | 315.00 | 315 | 143 | 142 | 28 | 2 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGG................................................................. | 23 | 0 | 1 | 275.00 | 275 | 134 | 135 | 0 | 6 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCT................................................................... | 21 | 0 | 1 | 154.00 | 154 | 80 | 69 | 4 | 1 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTG.................................................................. | 22 | 0 | 1 | 149.00 | 149 | 94 | 54 | 0 | 1 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGT......................................................................................................... | 24 | 0 | 1 | 123.00 | 123 | 46 | 65 | 2 | 2 | 6 | 2 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGT................................................................. | 23 | 1 | 1 | 79.00 | 79 | 45 | 34 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGT................................................................ | 24 | 1 | 1 | 40.00 | 40 | 22 | 18 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGC................................................................ | 24 | 0 | 1 | 27.00 | 27 | 15 | 11 | 0 | 1 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTC.................................................................... | 20 | 0 | 1 | 26.00 | 26 | 11 | 15 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATT........................................................................................................... | 22 | 1 | 1 | 19.00 | 19 | 10 | 8 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATG........................................................................................................... | 22 | 1 | 1 | 16.00 | 16 | 7 | 3 | 2 | 2 | 2 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGA................................................................. | 23 | 1 | 1 | 16.00 | 16 | 10 | 5 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAA............................................................................................................ | 21 | 1 | 1 | 10.00 | 10 | 2 | 0 | 8 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGAAGTAGATTAGCATCTACTGCCCTAAGTGCTCCTTCTGGC................................................................ | 65 | 0 | 1 | 9.00 | 9 | 0 | 0 | 0 | 8 | 1 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGG......................................................................................................... | 24 | 1 | 1 | 9.00 | 9 | 5 | 4 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAA.......................................................................................................... | 23 | 1 | 1 | 8.00 | 8 | 3 | 1 | 2 | 0 | 1 | 1 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTCT................................................................... | 22 | 0 | 1 | 7.00 | 7 | 6 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTT.................................................................. | 22 | 1 | 1 | 7.00 | 7 | 3 | 4 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTT..................................................................... | 19 | 0 | 1 | 7.00 | 7 | 3 | 4 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCA............................................................................................................... | 18 | 0 | 2 | 6.50 | 13 | 8 | 5 | 0 | 0 | 0 | 0 |
| ...............................................................TGAGGTGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 6.00 | 6 | 3 | 3 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAAA........................................................................................................... | 22 | 1 | 1 | 5.00 | 5 | 1 | 1 | 2 | 0 | 0 | 1 |
| ....................................................................TGCATCTAGTGCAGATAG.......................................................................................................... | 18 | 0 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGTT............................................................... | 25 | 2 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAT.......................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 2 | 1 | 0 | 0 | 1 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCA............................................................... | 25 | 0 | 1 | 4.00 | 4 | 0 | 3 | 1 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGATA........................................................................................................... | 21 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGAA........................................................................................................ | 25 | 2 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................TCTACTGCCCTAAGTGCTCCTT..................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TCTACTGCCCTAAGTGCTCCTTC.................................................................... | 23 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGATAG.......................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 1 | 1 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCGGATAGA......................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TAAAGTGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGATAGT......................................................................................................... | 23 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTA........................................................................................................ | 25 | 1 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TGAGGTGCATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGCGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGAT............................................................................................................ | 20 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTC.................................................................... | 21 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGC................................................................................................................ | 17 | 0 | 2 | 2.00 | 4 | 3 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TGAGGTGCATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTT................................................................ | 24 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGA....................................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTTT................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GTGCATCTAGTGCAGATAG.......................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGC................................................................. | 23 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TACGGTGCATCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTCTGT................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGACCTAAGTGCTCCTTCTG.................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAG.............................................................................................................. | 19 | 0 | 2 | 2.00 | 4 | 1 | 1 | 2 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGC......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGAAGTA................................................................................................... | 30 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .........................................................................................................CTGCCCTAAGTGCTCCTTCTGG................................................................. | 22 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................TGAGGTGCATCTAGTGCAGA............................................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGA............................................................................................................. | 19 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .................................................................AGGTGCATCTAGTGCAGATA........................................................................................................... | 20 | 0 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .................................................................AGGTGCATTTAGTGCAGATA........................................................................................................... | 20 | 1 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGTAGATA........................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATTTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTGCTTCT................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTA.................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCACCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCACCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCCGG................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAAAA........................................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................AAAGGTGCATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCTT.............................................................. | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAG............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGTATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGAAT.............................................................. | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGTAGATT........................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGATCCTTCAGGT................................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGCGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGATGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCGGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCGTCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TATGGTGCATCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CAAGGTGCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TGAGGTGCATCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTT.................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCGGATAGT......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GTGCATCTAGTGCAGATAGTAAG...................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCCGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGATGCATCTAGTGCAGATAGT......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................TGCCCTAAGTGCTCCTTCT................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTCTTT................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTCAA.................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................GTGAAGTAGACTAGCATCT........................................................................................ | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGGATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GTGCATCTAGTGCAGATA........................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................GCATCTAGTGCAGATAG.......................................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................CTAAGGTGCATCTAGTGCAGATAG.......................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................AAAGGTGCATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................CTGCCCTAAGTGCTCCTTCTGT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATGA.......................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCACA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGGGCATCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCT...................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................CACGGCCCTAAGTGCTCCTTCTGT................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGTAGA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGAA................................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGGA........................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAGA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................TCTACTGCCCTAAGTGCTCCTTCT................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTT........................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAATGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGAGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTTTGG................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAAGTGCATCTAGTGCAGA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGCGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................ATTTAAGGTGCATCTAGTGCAGATAGT......................................................................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCTTA............................................................. | 27 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCC................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGCGCAGA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGCGCATCTAGTGCAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGAGCATCTAGTGCAGATAGT......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATC........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCAGATAGA......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................TAGCATCTACTGCCCTAAGTGCTCCTTCT................................................................... | 29 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATTTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTGGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGAAGTT................................................................................................... | 30 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGAAGT.................................................................................................... | 29 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTC........................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGACA....................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAAGTGCATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGA................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCTCTAAGTGCTCCTTCTG.................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCATATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTAAA.............................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGTTGCATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTACATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGGGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTTCATCTAGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CAAGGTGCATCTAGTGCAGA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCCAGTGCAGA............................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................TACTGCCCTAAGTGCTCCTTCCGT................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ATTGCCCTAAGTGCTCCTTCTGT................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGATAGTGAAGTAT.................................................................................................. | 31 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGAGCATCTAGTGCAGATAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................CTAAGGTGCATCTAGTGCAGATT........................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCCTCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAAAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCCTCTG.................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGCGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................CTGCCCTAAGTGCTCCTTCTGGC................................................................ | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCG............................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGTAGAT............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCCGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TCAGGTGCATCTAGTGCAGATAGT......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTTGTGCAGATAGA......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................ACTAAGGTGCATCTAGTGCAGA............................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGAGCATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................CTACTGCCCTAAGTGCTCCTTCT................................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................CTACTGCCCTAAGTGCTCCTTC.................................................................... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAGGGTGCATCTAGTGCAGATA........................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GTGCATCTAGTGCAGA............................................................................................................. | 16 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAATGCTCCTTCTT.................................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGGGCAGA............................................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................AAGGTGCATCTAGTGCATAT............................................................................................................ | 20 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGGT............................................................................................................ | 21 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .....................................................................GCATCTAGTGCAGAT............................................................................................................ | 15 | 0 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTG................................................................................................................. | 16 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGCAGAAAAA......................................................................................................... | 24 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................................TGAAGTAGACTAGCATCT........................................................................................ | 18 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................GCTGCCCTAAGTGCTCCT...................................................................... | 18 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGGGCATCTAGTGC................................................................................................................ | 17 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................ATCTAGTGCAGATAG.......................................................................................................... | 15 | 0 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................ACTGCCCTAAGTGCT......................................................................... | 15 | 0 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............AATGTCGGCTTGATAGCGCA............................................................................................................................................................... | 20 | 3 | 17 | 0.06 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................TAAGGTGCATCTAGTGAAA.............................................................................................................. | 19 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
|
CGGAGCCCTTCGGTTCCACCCGAACTTTCGCGTCCCAGACGACCACAACTCACGAAAAACAAGATTCCACGTAGATCACGTCTATCACTTCATCTAATCGTAGATGACGGGATTCACGAGGAAGACCGTATTCTTCAATACAAAAGTAGGTTATTAGGTTCGGTTCGTTCATATATCCACAAAATTATGAAA
**************************************************....(((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).))))))))).....************************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 11:23 AM