ID:

ssc-mir-181b-1

 Coordinate:

chr10:26426857-26426936 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.2 -32.7
mature

  1. ssc-mir-181b-2  chr1:299324026-299324048 +
  2. ssc-mir-181b-1  chr10:26426904-26426926 -
star

Sense Strand Reads

GAAACCACAGCAGGACCTTCTCCTCCCTGTGCAGAGATTCCTTCTTAAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCCGCATTTTGCAATCACAATTGAGAGATAGGCCGTCCTTGAAAGAGGTGCT

*********************************************.....(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....))))))).......******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR139075

testes		 SRR1274763

ovary		 SRR1274764

testes		 SRR139076

testes
............................................................AACATTCATTGCTGTCGGTGGGT................................................................................................. 23 0 2 4177.50 8355 2818 3260 1016 889 325 47
............................................................AACATTCATTGCTGTCGGTGGGTT................................................................................................ 24 0 2 2264.50 4529 1032 1338 1497 484 100 78
............................................................AACATTCATTGCTGTCGGTG.................................................................................................... 20 0 2 1553.50 3107 1240 1236 561 43 15 12
............................................................AACATTCATTGCTGTCGGTGGG.................................................................................................. 22 0 2 1356.00 2712 474 470 870 551 309 38
............................................................AACATTCATTGCTGTCGGT..................................................................................................... 19 0 2 746.00 1492 589 496 373 12 12 10
............................................................AACATTCATTGCTGTCGGTGGGA................................................................................................. 23 1 2 518.50 1037 188 179 404 173 73 20
............................................................AACATTCATTGCTGTCGGTGGGGT................................................................................................ 24 1 2 516.50 1033 603 375 54 0 1 0
............................................................AACATTCATTGCTGTCGGTGGGG................................................................................................. 23 1 2 351.50 703 445 213 23 18 3 1
............................................................AACATTCATTGCTGTCGGTGG................................................................................................... 21 0 2 294.00 588 45 49 427 31 18 18
............................................................AACATTCATTGCTGTCGGTGGA.................................................................................................. 22 1 2 224.50 449 79 42 49 173 100 6
............................................................AACATTCATTGCTGTCGGTGT................................................................................................... 21 1 2 182.50 365 130 151 55 16 11 2
............................................................AACATTCATTGCTGTCGGTA.................................................................................................... 20 1 2 118.00 236 113 80 40 1 1 1
............................................................AACATTCATTGCTGTCGGTGGGTA................................................................................................ 24 1 2 115.50 231 25 43 134 19 4 6
............................................................AACATTCATTGCTGTCGGGGGGT................................................................................................. 23 1 2 104.50 209 84 102 20 2 0 1
............................................................AACATTCATTGCTGTCGGGGGGGT................................................................................................ 24 2 2 96.50 193 126 66 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGA................................................................................................... 21 1 2 96.50 193 50 45 20 43 34 1
............................................................AACATTCATTGCTGTCGGGGGGTT................................................................................................ 24 1 2 75.00 150 63 56 31 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTT................................................................................................ 23 0 2 67.50 135 14 13 72 20 6 10
............................................................AACATTCATTGCTGTCGGGG.................................................................................................... 20 1 2 66.00 132 80 41 11 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGT................................................................................................. 22 0 2 63.00 126 31 27 44 12 10 2
............................................................AACATTCATTGCTGTCGGTGGGAT................................................................................................ 24 1 2 57.00 114 9 21 72 10 0 2
............................................................AACATTCATTGCTGTCGGTGGGTTA............................................................................................... 25 1 2 52.50 105 15 14 70 2 0 4
............................................................AACATTCATTGCTGTCGGGGGGG................................................................................................. 23 2 2 46.00 92 54 36 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGAA................................................................................................ 24 2 2 42.50 85 27 27 9 9 12 1
....................................................................................................CTCACTGAACAATGAATGCAA........................................................... 21 0 1 42.00 42 18 9 15 0 0 0
............................................................AACATTCATTGCTGTCGGTGAGT................................................................................................. 23 1 2 40.50 81 32 49 0 0 0 0
............................................................AACATTCATTGCTGTCGGGGGG.................................................................................................. 22 1 2 39.00 78 25 33 20 0 0 0
............................................................AACATTCATTGCTGTCGG...................................................................................................... 18 0 2 37.50 75 13 14 43 4 1 0
............................................................AACATTCATTGCTGTCGGGGG................................................................................................... 21 1 2 32.50 65 28 21 15 0 0 1
............................................................AACATTCATTGCTGTCGGTGGGTAA............................................................................................... 25 2 2 29.00 58 10 9 33 5 0 1
............................................................AACATTCATTGCTGTCGGGGT................................................................................................... 21 2 2 28.00 56 38 17 1 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGA................................................................................................. 23 2 2 25.00 50 22 17 10 0 0 1
............................................................AACATTCATTGCTGTCGGTGGGTTAT.............................................................................................. 26 2 3 24.33 73 14 17 39 1 2 0
............................................................AACATTCATTGCTGTCGGTGGGGA................................................................................................ 24 2 2 23.00 46 25 20 1 0 0 0
............................................................AACATTCATTGCTGTCGGTT.................................................................................................... 20 1 2 23.00 46 15 7 24 0 0 0
............................................................AACATTCATTGCTGTCGGTGGAA................................................................................................. 23 2 2 22.00 44 3 4 15 12 10 0
............................................................AACATTCATTGCTGT......................................................................................................... 15 0 8 18.13 145 1 0 142 0 0 2
............................................................AACATTCATTGCTGTCGGA..................................................................................................... 19 1 2 18.00 36 14 10 11 1 0 0
............................................................AACATTCATTGCTGTCGGTGGT.................................................................................................. 22 1 2 17.50 35 0 4 18 7 5 1
.............................................................ACATTCATTGCTGTCGGTGGG.................................................................................................. 21 0 2 17.00 34 3 7 10 5 7 2
............................................................AACATTCATTGCTGTCGGTGGGC................................................................................................. 23 1 2 16.50 33 9 11 12 1 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTAA.............................................................................................. 26 1 1 15.00 15 6 3 5 0 1 0
............................................................AACATTCATTGCTGTCGGTAA................................................................................................... 21 2 4 14.00 56 4 11 24 11 3 3
............................................................AACATTCATTGCTGTCGGTGGAT................................................................................................. 23 1 2 13.00 26 10 3 1 8 4 0
.............................................................ACATTCATTGCTGTCGGTG.................................................................................................... 19 0 2 12.00 24 6 8 9 0 1 0
....................................................................................................CTCACTGAACAATGAATGCA............................................................ 20 0 1 12.00 12 0 4 6 1 0 1
............................................................AACATTCATTGCTGTCGGTGGGCT................................................................................................ 24 1 2 9.50 19 4 3 11 0 0 1
.............................................................ACATTCATTGCTGTCGGTGGGA................................................................................................. 22 1 2 9.00 18 3 3 7 1 3 1
............................................................AACATTCATTGCTGTCGGTGGGTTGAAC............................................................................................ 28 0 1 9.00 9 0 2 6 0 0 1
....................................................................................................CTCACTGAACAATGAATGCAT........................................................... 21 1 1 9.00 9 4 1 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTTA.............................................................................................. 26 1 2 8.50 17 3 1 12 1 0 0
...........................................................CAACATTCATTGCTGTCGGTGGGT................................................................................................. 24 0 2 8.00 16 2 9 1 4 0 0
............................................................AACATTCATTGCTGTCGGCGGGT................................................................................................. 23 1 2 7.50 15 4 4 6 1 0 0
............................................................AACATTCATTGCTGTC........................................................................................................ 16 0 5 6.60 33 0 0 32 0 0 1
....................................................................................................CTCACTGAACAATGAATGCAAT.......................................................... 22 1 1 6.00 6 1 2 2 0 1 0
............................................................AACATTCATTGCTGTTGGTGGGT................................................................................................. 23 1 2 6.00 12 3 5 4 0 0 0
.............................................................ACATTCATTGCTGTCGGTGG................................................................................................... 20 0 2 6.00 12 0 0 9 2 1 0
............................................................AACATTCATTGTTGTCGGTGGGTTAA.............................................................................................. 26 2 2 5.50 11 0 3 2 1 0 5
............................................................AACATTCATTGCTGTCGGCGGGTT................................................................................................ 24 1 2 5.50 11 2 0 7 0 1 1
............................................................AACATTCATTGCTGTCGGTGGGTG................................................................................................ 24 1 2 5.50 11 0 0 0 10 1 0
...........................................................CAACATTCATTGCTGTCGGTG.................................................................................................... 21 0 2 5.00 10 3 1 6 0 0 0
............................................................AACATTCATTGCTGTCGGG..................................................................................................... 19 1 2 4.50 9 3 2 3 1 0 0
............................................................AACATTCATTGCTGTCGGCG.................................................................................................... 20 1 2 4.50 9 2 5 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAAT.............................................................................................. 26 3 3 4.33 13 7 5 1 0 0 0
............................................................AACATTCATTGCTGTCGGGGGA.................................................................................................. 22 2 3 4.33 13 4 7 2 0 0 0
............................................................AACATTCATTGCTGTCGGCGGG.................................................................................................. 22 1 2 4.00 8 1 3 3 1 0 0
.............................................................ACATTCATTGCTGTCGGTGGGGT................................................................................................ 23 1 2 4.00 8 4 2 1 0 0 1
............................................................AACATTCATTGCTGTCG....................................................................................................... 17 0 2 4.00 8 2 1 4 1 0 0
............................................................AACATTCATTGCTGTCGTTGGGT................................................................................................. 23 1 2 4.00 8 2 1 5 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTAAT............................................................................................. 27 2 1 4.00 4 2 2 0 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGTA................................................................................................ 24 2 2 4.00 8 0 2 5 0 0 1
............................................................AACATTCATTGCTGTCGGTGGGTTGT.............................................................................................. 26 1 2 4.00 8 4 0 1 3 0 0
............................................................AACATTCATTGCTGTCGGTGAA.................................................................................................. 22 2 3 4.00 12 1 1 0 3 7 0
...........................................................CAACATTCATTGCTGTCGGTGG................................................................................................... 22 0 2 4.00 8 0 0 8 0 0 0
............................................................AACATTCATTGCTGTCGGGGA................................................................................................... 21 2 7 3.57 25 15 10 0 0 0 0
...........................................................CAACATTCATTGCTGTCGGTGGGTT................................................................................................ 25 0 2 3.50 7 2 2 1 2 0 0
............................................................AATATTCATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 3.50 7 0 0 5 0 0 2
.............................................................ACATTCATTGCTGTCGGT..................................................................................................... 18 0 2 3.50 7 5 2 0 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTA................................................................................................ 23 1 2 3.50 7 0 0 6 1 0 0
.............................................................ACATTCATTGCTGTCGGTGGGG................................................................................................. 22 1 2 3.50 7 3 2 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGAG.................................................................................................. 22 1 2 3.50 7 2 1 0 3 1 0
............................................................AACATTCATTGCTGTCGGTGGGAAA............................................................................................... 25 3 4 3.50 14 5 2 6 0 1 0
............................................................AACATTCATTGCTGTCGGAGGGT................................................................................................. 23 1 2 3.50 7 2 0 4 0 0 1
....................................................................................................CTCACTGAACAATGAATGC............................................................. 19 0 1 3.00 3 1 0 2 0 0 0
............................................................AACATTCATTGTTGTCGGTGGGTTGAAC............................................................................................ 28 1 1 3.00 3 0 0 1 0 0 2
............................................................AACATTCATTGCTGTCGGTGGGTAGA.............................................................................................. 26 1 1 3.00 3 0 0 2 1 0 0
.........................................................ATTAACATTCATTGCTGTCGGTGG................................................................................................... 24 1 1 3.00 3 2 1 0 0 0 0
...............................................................ATTCATTGCTGTCGGTGGGTT................................................................................................ 21 0 2 3.00 6 2 0 3 0 0 1
............................................................AACATTCATTGCTGTCGGTAT................................................................................................... 21 2 3 3.00 9 1 1 7 0 0 0
............................................................AACATTCATTGCTGTCGATGGGT................................................................................................. 23 1 2 3.00 6 5 1 0 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGA.................................................................................................. 21 1 2 3.00 6 1 1 0 3 1 0
.........................................................ATTAACATTCATTGCTGTCGGTGGGTT................................................................................................ 27 1 1 3.00 3 1 2 0 0 0 0
............................................................AACATTCATTGCTGTTGGTG.................................................................................................... 20 1 2 3.00 6 4 1 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTC................................................................................................ 24 1 2 3.00 6 1 1 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGAT.................................................................................................. 22 2 2 3.00 6 0 0 0 2 4 0
............................................................AACATTCATTGCTGTCGGTGGGTTTAT............................................................................................. 27 2 2 3.00 6 1 3 2 0 0 0
............................................................AACATTCATTGCCGTCGGTGGGT................................................................................................. 23 1 2 3.00 6 1 4 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTATT............................................................................................. 27 3 3 2.67 8 2 2 2 2 0 0
............................................................AACATTCATTGTTGTCGGTGGGTTTA.............................................................................................. 26 2 3 2.67 8 1 1 5 0 0 1
...........................................................CAACATTCATTGCTGTCGGT..................................................................................................... 20 0 2 2.50 5 1 1 3 0 0 0
............................................................AACATTCATTGCTGTCGGTGGTTT................................................................................................ 24 1 2 2.50 5 0 0 5 0 0 0
............................................................AACATTCATTGCTGTCGGCGGGA................................................................................................. 23 2 2 2.50 5 1 0 3 0 0 1
............................................................AACATTCATTGCTGTCGGC..................................................................................................... 19 1 2 2.50 5 2 2 0 0 0 1
............................................................AACATTTATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 2.50 5 2 0 3 0 0 0
............................................................AACATTCATTGCTGTCGGTGTA.................................................................................................. 22 2 2 2.50 5 1 4 0 0 0 0
............................................................AACGTTCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 2.50 5 1 2 2 0 0 0
............................................................AACATTCATTGCTGTCGGAGGGTT................................................................................................ 24 1 2 2.50 5 3 0 1 0 0 1
............................................................AACATTCATTGCTGTCGGAGGG.................................................................................................. 22 1 2 2.50 5 1 0 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGGC.................................................................................................. 22 1 2 2.50 5 0 1 0 3 1 0
............................................................AACATTCATTGCTGTCGGTGAGTT................................................................................................ 24 1 2 2.50 5 3 1 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAGT.............................................................................................. 26 2 2 2.50 5 2 1 0 1 1 0
............................................................AACATTCATTGCTGTCGGTGGTT................................................................................................. 23 1 2 2.50 5 0 0 4 0 1 0
............................................................AACATTCTTTGCTGTCGGTGGGT................................................................................................. 23 1 2 2.50 5 2 2 1 0 0 0
............................................................AACATTTATTGCTGTCGGTGGGT................................................................................................. 23 1 2 2.50 5 0 3 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGCT................................................................................................. 23 1 2 2.50 5 2 2 1 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGGA................................................................................................ 24 3 2 2.50 5 4 1 0 0 0 0
............................................................AACATTCATTGCTGTCAGTGGGTT................................................................................................ 24 1 2 2.00 4 3 0 1 0 0 0
............................................................AACCTTCATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 2.00 4 0 2 2 0 0 0
............................................................AACATTCATTCCTGTCGGTGGGT................................................................................................. 23 1 2 2.00 4 2 0 0 2 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAGAAC............................................................................................ 28 1 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGTAA................................................................................................ 24 3 2 2.00 4 0 0 0 0 4 0
............................................................AACATTCATTGCTGTCGGTGGTA................................................................................................. 23 2 2 2.00 4 0 0 1 2 1 0
.............................................................ACATTCATTGCTGTCGGTGA................................................................................................... 20 1 2 2.00 4 1 1 0 1 1 0
....................................................................................................CTCACTGAACAATGAATGCAAC.......................................................... 22 0 1 2.00 2 2 0 0 0 0 0
............................................................AACATTCATTGCTGTCGGCGG................................................................................................... 21 1 2 2.00 4 0 0 3 0 0 1
............................................................AACATTCATTGTTGTCGGTGGGTTTAT............................................................................................. 27 3 3 2.00 6 1 1 3 0 0 1
............................................................AACATTCATTGCTGTCGGTGTGT................................................................................................. 23 1 2 2.00 4 1 1 1 0 0 1
............................................................AACATTCATTGCTGTCGGTGAGA................................................................................................. 23 2 2 2.00 4 2 1 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTGAAC............................................................................................. 27 3 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGCGT................................................................................................. 23 1 2 2.00 4 1 1 1 0 1 0
............................................................AACATTCATTGTTGTCGGTGGGTAAA.............................................................................................. 26 3 2 2.00 4 0 0 4 0 0 0
...........................................................CAACATTCATTGCTGT......................................................................................................... 16 0 3 2.00 6 0 0 6 0 0 0
............................................................AACATTCATTGCTATCGGTGGGTT................................................................................................ 24 1 2 2.00 4 1 0 3 0 0 0
................................................................................................................TGAATGCAACTGTGGCCCCGCAT............................................. 23 0 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGAAA................................................................................................ 24 3 2 2.00 4 2 0 0 0 2 0
....................................................................................................CTCACTGAACAATGAATGCAAA.......................................................... 22 1 2 2.00 4 0 2 2 0 0 0
.........................................................ATTAACATTCATTGCTGTCGGTGA................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................................................................AGCTCACTGAACAATGAATGCAA........................................................... 23 0 1 2.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTTTCGGTGGGTT................................................................................................ 24 1 2 2.00 4 0 0 4 0 0 0
...........................................................CAACATTCATTGCTGTCGGTGT................................................................................................... 22 1 2 2.00 4 2 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGGGGT.................................................................................................. 22 2 2 2.00 4 2 0 2 0 0 0
............................................................AACATTCATTGCTGTTGGTGGGTT................................................................................................ 24 1 2 2.00 4 3 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAG............................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
............................................................AACATTCAACGCTGTCGGTGAGTTGAAC............................................................................................ 28 3 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGTTGGGTT................................................................................................ 24 1 2 2.00 4 0 3 1 0 0 0
.....................................................................................................TCACTGAACAATGAATGCAACT......................................................... 22 0 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCAGTGGGT................................................................................................. 23 1 2 2.00 4 1 3 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGAC................................................................................................ 24 2 2 2.00 4 0 0 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGTT.................................................................................................. 22 2 2 2.00 4 1 2 1 0 0 0
............................................................AACATTCATTGCTGTCGGTTGG.................................................................................................. 22 1 2 2.00 4 0 1 3 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGGAAA.............................................................................................. 26 3 1 2.00 2 2 0 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTGAGC............................................................................................ 28 1 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGCCGGTGGGT................................................................................................. 23 1 2 2.00 4 1 2 0 1 0 0
.............................................................................................AGACAAGCTCACTGAACAATGAATGCAT........................................................... 28 1 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGAT................................................................................................ 24 2 2 2.00 4 2 2 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAAA.............................................................................................. 26 2 1 2.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTGA.............................................................................................. 26 0 1 2.00 2 1 0 0 1 0 0
.....................................................................................................TCACTGAACAATGAATGCA............................................................ 19 0 1 2.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGTTGGGA................................................................................................. 23 2 3 1.67 5 0 1 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTTAA............................................................................................. 27 1 2 1.50 3 1 2 0 0 0 0
............................................................AACACTCATTGCTGTCGGTG.................................................................................................... 20 1 2 1.50 3 1 2 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGGTA............................................................................................... 25 2 2 1.50 3 1 1 1 0 0 0
............................................................AACATCCATTGCTGTCGGTG.................................................................................................... 20 1 2 1.50 3 1 0 2 0 0 0
.............................................................AACATCATTGCTGTCGGTGGGTT................................................................................................ 23 3 2 1.50 3 0 0 3 0 0 0
............................................................AACATTCATCGCTGTCGGTGGGT................................................................................................. 23 1 2 1.50 3 1 2 0 0 0 0
............................................................AACATTCCTTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.50 3 1 1 1 0 0 0
............................................................AATATTCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.50 3 1 1 1 0 0 0
............................................................AACATTCATTGCTGTCGCTGGGT................................................................................................. 23 1 2 1.50 3 1 0 2 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTTGT.............................................................................................. 25 1 2 1.50 3 2 0 1 0 0 0
............................................................AACATTCATTGCTGTCTGTGGGT................................................................................................. 23 1 2 1.50 3 3 0 0 0 0 0
............................................................AACATCCATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.50 3 2 0 1 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGGA................................................................................................ 23 2 2 1.50 3 1 2 0 0 0 0
............................................................AACATTCATTGCTGCCGGTGGGTT................................................................................................ 24 1 2 1.50 3 1 0 2 0 0 0
............................................................AACATTCACTGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.50 3 1 1 1 0 0 0
.............................................................ACATTCATTGCTGTCGGTGT................................................................................................... 20 1 2 1.50 3 1 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTC............................................................................................... 25 1 2 1.50 3 0 2 1 0 0 0
...............................................................ATTCATTGCTGTCGGTGGGT................................................................................................. 20 0 2 1.50 3 2 1 0 0 0 0
............................................................AACCTTCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.50 3 0 1 0 2 0 0
............................................................GACATTCATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.50 3 0 1 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTTATT............................................................................................ 28 3 2 1.50 3 1 0 2 0 0 0
............................................................AACATTCATTGCTGTCGTTGGG.................................................................................................. 22 1 2 1.50 3 0 1 2 0 0 0
............................................................AACATTCATTGCTGTCGGAA.................................................................................................... 20 2 5 1.40 7 1 0 5 1 0 0
............................................................AACATTCATTGCTGTCGGTTT................................................................................................... 21 2 3 1.33 4 1 2 0 0 0 1
............................................................AACATTCATTGCTGTCGGTGGGGAA............................................................................................... 25 3 3 1.33 4 2 1 1 0 0 0
.......................................................................................................ACTGAACAATGAATGCA............................................................ 17 0 3 1.33 4 0 0 4 0 0 0
............................................................AACATTCAATGCTGTCGGTG.................................................................................................... 20 1 4 1.25 5 1 2 2 0 0 0
............................................................AACATTCATTGCTGTTGGT..................................................................................................... 19 1 4 1.25 5 1 0 4 0 0 0
............................................................AACATTCATTGCTGTCGGTGTTT................................................................................................. 23 2 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCGTTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 0 1 1 0 0 0
............................................................AACATTCATTGCTATCGGTGGGA................................................................................................. 23 2 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTTG................................................................................................... 21 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGGCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 0 2 0 0 0
....................................................................................................CTCACTAAACAATGAATGCAA........................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGAAGAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACGTTCATTGCTGTCGGT..................................................................................................... 19 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATCGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATCCATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGTTA............................................................................................... 25 2 2 1.00 2 1 0 1 0 0 0
.............................................................ACATTCATTGCTGTCGGTA.................................................................................................... 19 1 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTG............................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................ACATTCATTGTTGTCGGTGGGTTAA.............................................................................................. 25 2 2 1.00 2 2 0 0 0 0 0
...............................................................ATTCATTGCTGTCGGTGGG.................................................................................................. 19 0 2 1.00 2 1 0 1 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTTA............................................................................................... 24 1 2 1.00 2 0 0 2 0 0 0
.....................................................................................................TCACTGAACAATGAATGCAA........................................................... 20 0 1 1.00 1 0 0 1 0 0 0
............................................................AACCTTCATTGCTGTCGGTG.................................................................................................... 20 1 3 1.00 3 0 0 3 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTCA.............................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
............................................................AACATTCACTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGTTGTCGGTGGGTTAAT............................................................................................. 27 3 2 1.00 2 0 2 0 0 0 0
............................................................AACATTCATTGCTGTCGTTGGA.................................................................................................. 22 2 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTAGGT................................................................................................. 23 1 2 1.00 2 0 1 1 0 0 0
............................................................AACACTCATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 0 1 0 1 0
............................................................AACATTCATTGCTGACGGTGGGT................................................................................................. 23 1 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGCGGGGT................................................................................................ 24 2 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTGTCGCTGGG.................................................................................................. 22 1 2 1.00 2 0 0 0 1 0 1
............................................................AACATTCATTGCTGTCGGTGGGTTGAACTGT......................................................................................... 31 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................ACAAGCTCACTGAACAATGAATGCAT........................................................... 26 1 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGGGGGTTAA.............................................................................................. 26 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAACATTCATTGCTGTCGGTGGG.................................................................................................. 23 0 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTATCGGTG.................................................................................................... 20 1 2 1.00 2 0 2 0 0 0 0
............................................................AACATTCATTGCCGTCGGTG.................................................................................................... 20 1 2 1.00 2 1 1 0 0 0 0
..............................................................CATTCATTGCTGTCGGTGGGTAA............................................................................................... 23 2 2 1.00 2 0 0 1 0 0 1
...........................................................CAACATTCATTGCTGTCGGGG.................................................................................................... 21 1 2 1.00 2 1 0 1 0 0 0
............................................................GACATTCATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 1 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTAC.............................................................................................. 26 2 2 1.00 2 1 1 0 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTTAA.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
.........................................................ATTAACATTCATTGCTGTCGGGGGGT................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
.............................................................ATATTCATTGCTGTCGGTGGGTTAAAC............................................................................................ 27 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTTATTGCTGTCGGTG.................................................................................................... 20 1 3 1.00 3 2 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTGGAC............................................................................................ 28 1 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTGAACT........................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0
............................................................AACATTCATTTCTGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 1 0 0 0 0 1
..................................................................................................AGCTCACTGAACAATGAATGCA............................................................ 22 0 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGTG.................................................................................................. 22 1 2 1.00 2 1 0 0 0 1 0
............................................................AACATTCATTGCTGTCGGTGGGTGAAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................GTAGACAAGCTCACTGAACAATGACTGCA............................................................ 29 1 1 1.00 1 0 0 1 0 0 0
............................................................AATATTCATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 0 0 2 0 0 0
..................................................................CATTGCTGTCGGTGGGT................................................................................................. 17 0 2 1.00 2 1 1 0 0 0 0
............................................................AACGTTCATTGCTGTCGGTGG................................................................................................... 21 1 2 1.00 2 0 1 1 0 0 0
............................................................AACCTTCATTGCTGTCGGTGG................................................................................................... 21 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTACTGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
..................................................................................................AGCTCACTGAACAATGAATGCAT........................................................... 23 1 1 1.00 1 0 0 0 0 0 1
............................................................AACATTCATTGCTGTCGGTGGATT................................................................................................ 24 1 2 1.00 2 2 0 0 0 0 0
...........................................................CAACATTCATTGCTGTCGGTGGA.................................................................................................. 23 1 2 1.00 2 0 0 0 1 1 0
............................................................AACATTTATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 2 0 0 0 0 0
............................................................AACACTCATTGCTGTCGGT..................................................................................................... 19 1 2 1.00 2 0 2 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAGGAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTTATTGCTGTCGGTGGGA................................................................................................. 23 2 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGTGTT................................................................................................ 24 1 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTATCGGTGGG.................................................................................................. 22 1 2 1.00 2 1 0 0 0 1 0
............................................................AACATTCATTGCTGTCGGTGGGAG................................................................................................ 24 2 2 1.00 2 1 0 0 1 0 0
............................................................AACATTCATTGCTGTCGGGGGGCT................................................................................................ 24 2 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTCTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 1 1 0 0 0 0
............................................................GACATTCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 0 0 0 1 1 0
............................................................AACATTCATTGCTGTCGGTGGGTAGAA............................................................................................. 27 1 1 1.00 1 0 0 0 0 1 0
............................................................AACATTCATTGCTGTCGGTGGGGAGT.............................................................................................. 26 3 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTTGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGGAGC.............................................................................................. 26 3 1 1.00 1 0 0 0 0 0 1
............................................................AACATTCATTGCTTTCGGTGGGTAA............................................................................................... 25 3 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGCTT................................................................................................ 24 1 2 1.00 2 0 1 1 0 0 0
............................................................AACATTCATTGCTATCGGTGGGT................................................................................................. 23 1 2 1.00 2 1 1 0 0 0 0
.............................................................ATATTCATTGCTGTCGGTGGGTT................................................................................................ 23 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGATGTCGGTGGGT................................................................................................. 23 1 3 1.00 3 3 0 0 0 0 0
............................................................AACATTCATTGCTGTCGGCGGGG................................................................................................. 23 2 2 1.00 2 1 1 0 0 0 0
............................................................TACATTCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 0 1 1 0 0 0
............................................................AACATCCATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 1 1 0 0 0 0
............................................................AACGTTCATTGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
............................................................AACCTTCATTGCTGTCGGTGGGA................................................................................................. 23 2 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAGGGC............................................................................................ 28 3 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGTTGTCGGTGGGTCGAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
.............................................................ACATTCATTGCTGTCGGTGGGTTG............................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
............................................................AACATTCATTGCTGGCGGTGGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
.........................................................ATTAACATTCATTGCTGTCGGTGGGA................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
............................................................AACATTCATTGTTGTCGGTGGGTAGAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGATA................................................................................................ 24 2 2 1.00 2 0 1 0 0 0 1
............................................................AACACTCATTGCTGTCGGTGGGGT................................................................................................ 24 2 2 1.00 2 1 1 0 0 0 0
.........................................................ATTAACATTCATTGCTGTCGGTG.................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................AACATTCCTTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 0 0 1 0 0 1
..............................................................CATTCATTGCTGTCGGTGGGTT................................................................................................ 22 0 2 1.00 2 0 0 1 1 0 0
............................................................AACATTCGTTGCTGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTAG................................................................................................... 21 1 2 1.00 2 0 1 1 0 0 0
............................................................AACATTCATTGTTGTCGGTGGGACGAAC............................................................................................ 28 3 1 1.00 1 0 0 1 0 0 0
............................................................AACCTTCATTGCTGTCGGTGGG.................................................................................................. 22 1 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCGTTGCTGTCGGTGGA.................................................................................................. 22 2 2 1.00 2 1 0 1 0 0 0
............................................................AACATTGATTGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCAATGCTGTCGGTGGGT................................................................................................. 23 1 2 1.00 2 1 1 0 0 0 0
.............................................................ACATTCATTGCTGTCGGGGGGT................................................................................................. 22 1 2 1.00 2 1 1 0 0 0 0
..........................................................TCAACATTCATTGCTGTCGGTGGGT................................................................................................. 25 0 2 1.00 2 0 1 0 0 1 0
............................................................AACATTCATTGCTGTCGGTGGGACGAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGC................................................................................................... 21 1 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTATCGGTGG................................................................................................... 21 1 2 1.00 2 0 0 2 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGGAGAAC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGAGGGGT................................................................................................ 24 2 2 1.00 2 0 0 1 0 0 1
............................................................AACATTCATTGCTGTTGGTGGG.................................................................................................. 22 1 2 1.00 2 1 0 1 0 0 0
.........................................................ATTAACATTCATTGCTGTCGGTGGG.................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
............................................................AACATTCATTGCTGTCGGAGGGTA................................................................................................ 24 2 2 1.00 2 1 1 0 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTAGAGC............................................................................................ 28 2 1 1.00 1 0 0 1 0 0 0
............................................................AACATTCATTGCTGTCGGTGGGTTAAA............................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0
.............................................................ACATTCATTGCTGTCGGGGGGTT................................................................................................ 23 1 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCCGTCGGTGGGTT................................................................................................ 24 1 2 1.00 2 1 1 0 0 0 0
............................................................AACCTTCATTGCTGTCGGTGGGTA................................................................................................ 24 2 2 1.00 2 1 0 1 0 0 0
............................................................AACATTCATTGCTGGCGGTGGGT................................................................................................. 23 1 2 1.00 2 0 0 2 0 0 0

Anti-sense strand reads

CTTTGGTGTCGTCCTGGAAGAGGAGGGACACGTCTCTAAGGAAGAATTTTCCAGTGTTAGTTGTAAGTAACGACAGCCACCCAACTTGACACATCTGTTCGAGTGACTTGTTACTTACGTTGACACCGGGGCGTAAAACGTTAGTGTTAACTCTCTATCCGGCAGGAACTTTCTCCACGA

********************************************.....(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....))))))).......********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:23 AM