ID:

ssc-mir-181a-1

 Coordinate:

chr10:26427018-26427121 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.2 -28.9 -28.9
mature

  1. ssc-mir-181a-2  chr1:299322161-299322183 +
  2. ssc-mir-181a-1  chr10:26427077-26427099 -
star

Sense Strand Reads

CCCCCGCCCCTTTCAGATTCTCACAGATACTGTAAAGTCAGCGGAATTCTGAGTTTAGAGGTTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTCAAATCAAAACCATCGACCGTTGATTGTACCCTATGGCCAACCATCAGCTCCACAATGGCTTTCCGGATTTGCTGAAGACAGGAAACCACAGCAGGACCTT

*********************************************************..(((((((..((...(((.((((((..(((((((.((((.((.......)).))))))))))))))))).)))...))..)).)))))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR1274763

ovary		 SRR066809

ovary		 SRR066810

testes		 SRR1274764

testes		 SRR139075

testes		 SRR139076

testes
........................................................................AACATTCAACGCTGTCGGTGAGT............................................................................................................. 23 0 2 29430.50 58861 17663 14401 14903 8039 3662 193
........................................................................AACATTCAACGCTGTCGGTGAG.............................................................................................................. 22 0 2 14438.00 28876 14602 1015 1035 9120 2966 138
........................................................................AACATTCAACGCTGTCGGTGA............................................................................................................... 21 0 2 3443.50 6887 1846 894 871 1154 2029 93
........................................................................AACATTCAACGCTGTCGGTGAGTT............................................................................................................ 24 0 2 2105.00 4210 911 793 810 193 1398 105
........................................................................AACATTCAACGCTGTCGGTG................................................................................................................ 20 0 2 2016.50 4033 222 935 845 106 1862 63
........................................................................AACATTCAACGCTGTCGGTGAGA............................................................................................................. 23 1 2 1992.00 3984 1017 708 604 820 775 60
................................................................................................................ACCATCGACCGTTGATTGTACC...................................................................... 22 0 1 1273.00 1273 86 569 520 41 53 4
........................................................................AACATTCAACGCTGTCGGTGAGTTT........................................................................................................... 25 0 2 1121.50 2243 221 429 402 41 1048 102
........................................................................AACATTCAACGCTGTCGGT................................................................................................................. 19 0 2 1075.00 2150 113 804 653 61 507 12
........................................................................AACATTCAACGCTGTCGGTGT............................................................................................................... 21 1 2 390.50 781 315 88 59 180 134 5
........................................................................AACATTCAACGCTGTCGGGGAGT............................................................................................................. 23 1 2 331.50 663 5 302 295 2 57 2
........................................................................AACATTCAACGCTGTCGGTGAA.............................................................................................................. 22 1 2 291.00 582 229 27 26 251 47 2
........................................................................AACATTCAACGCTGTCGGGGA............................................................................................................... 21 1 2 200.50 401 1 197 147 1 53 2
........................................................................AACATTCAACGCTGTCGGTA................................................................................................................ 20 1 2 183.00 366 9 130 82 7 134 4
........................................................................AACATTCAACGCTGTCGGTGG............................................................................................................... 21 1 2 153.50 307 194 0 1 108 4 0
................................................................................................................ACCATCGACCGTTGATTGTAC....................................................................... 21 0 1 133.00 133 2 44 31 0 53 3
........................................................................AACATTCAACGCTGTCGGTGAGG............................................................................................................. 23 1 2 121.50 243 16 122 68 11 25 1
........................................................................AACATTCAACGCTGTCGATGAGT............................................................................................................. 23 1 2 108.00 216 0 154 59 1 2 0
........................................................................AACATTCAACGCTGTCGGTAA............................................................................................................... 21 1 2 95.50 191 6 35 21 5 115 9
........................................................................AACATTCAACGCTGTCGGTGAT.............................................................................................................. 22 1 2 85.00 170 88 6 9 51 15 1
........................................................................AACATTCAACGCTGTCGGTGAGTTTT.......................................................................................................... 26 1 2 74.50 149 18 47 42 5 28 9
................................................................................................................ACCATCGACCGTTGATTGTACT...................................................................... 22 1 1 74.00 74 5 35 31 0 1 2
........................................................................AACATTCAACGCTGTCGGTGAAA............................................................................................................. 23 2 2 72.50 145 59 2 1 57 22 4
.........................................................................ACATTCAACGCTGTCGGTGAGT............................................................................................................. 22 0 2 63.50 127 5 50 54 5 11 2
........................................................................AACATTCAACGCTGTCGG.................................................................................................................. 18 0 2 56.50 113 19 17 11 9 56 1
........................................................................AACATTCAACGCTGTCGGGG................................................................................................................ 20 1 2 52.00 104 1 45 26 0 32 0
........................................................................AACATTCAACGCTGTCGGTGAGTA............................................................................................................ 24 1 2 46.00 92 8 13 10 6 51 4
........................................................................AACATTCAACGCTGTCGGGGAGTT............................................................................................................ 24 1 2 44.50 89 0 31 27 0 29 2
................................................................................................................ACCATCGACCGTTGATTGTACCT..................................................................... 23 1 1 43.00 43 3 17 20 3 0 0
........................................................................AACATTCAACGCTGTCGGGGAG.............................................................................................................. 22 1 2 40.00 80 2 9 9 4 55 1
........................................................................AACATTCAACGCTGTCGGCGAGT............................................................................................................. 23 1 2 36.00 72 12 25 22 4 9 0
........................................................................AACATTCAACGTTGTCGGTGAGT............................................................................................................. 23 1 2 35.00 70 10 31 20 7 1 1
........................................................................AACATTCAACGCTGTCGGTT................................................................................................................ 20 1 2 33.00 66 3 18 17 0 26 2
........................................................................AACATTCAACGCTGT..................................................................................................................... 15 0 4 32.25 129 0 1 0 0 126 2
........................................................................AACATTCAACGCTGTCGGTGAGAA............................................................................................................ 24 2 2 29.50 59 14 10 10 18 6 1
................................................................................................................ACCATCGACCGTTGATTGTA........................................................................ 20 0 1 27.00 27 2 10 9 1 5 0
................................................................................................................ACCATCGACCGTTGATTGT......................................................................... 19 0 1 27.00 27 1 6 7 2 10 1
........................................................................AACATTCAACGCTGTCGGTGAGC............................................................................................................. 23 1 2 25.50 51 5 9 13 4 17 3
........................................................................AACATTCAACGCTGTCGGTGAGTTA........................................................................................................... 25 1 2 25.00 50 1 13 8 0 26 2
........................................................................AACATTCAACGCTGTC.................................................................................................................... 16 0 2 24.50 49 0 0 0 0 48 1
........................................................................AACATTCAACGCTGTTGGTGAGT............................................................................................................. 23 1 2 24.50 49 6 22 17 0 4 0
........................................................................AACATTCAACGCTGTCGGTGAGGTT........................................................................................................... 25 1 2 24.50 49 0 23 10 0 16 0
........................................................................AACATTCAACGCTGTCGGGGAGTTT........................................................................................................... 25 1 2 23.50 47 0 17 15 0 15 0
........................................................................AACATTCAACGCTGTCGGGGAGA............................................................................................................. 23 2 2 23.00 46 0 20 15 0 10 1
........................................................................AACATTCAATGCTGTCGGTGAGT............................................................................................................. 23 1 2 22.50 45 5 12 11 4 13 0
........................................................................AACATTCAACGCTGTCGGTGAGGT............................................................................................................ 24 1 2 20.00 40 0 13 11 0 13 3
........................................................................AACATTCAACGCTGTCGGA................................................................................................................. 19 1 2 19.50 39 1 19 5 0 14 0
........................................................................AACATTCAACGCTGTCGGTGATT............................................................................................................. 23 1 2 19.00 38 1 1 3 1 27 5
.........................................................................ACATTCAACGCTGTCGGTGAG.............................................................................................................. 21 0 2 18.00 36 16 2 4 9 5 0
.......................................................................GAACATTCAACGCTGTCGGTGAG.............................................................................................................. 23 0 2 17.50 35 24 0 0 10 1 0
........................................................................AACATTTAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 17.00 34 3 9 8 0 14 0
........................................................................AACATTCAACGCTGTCGGTGAAT............................................................................................................. 23 1 2 17.00 34 17 5 4 7 1 0
.......................................................................GAACATTCAACGCTGTCGGTGA............................................................................................................... 22 0 2 16.00 32 13 1 0 8 9 1
.......................................................................CAACATTCAACGCTGTCGGTGAGT............................................................................................................. 24 1 2 15.50 31 2 12 13 1 3 0
...............................................................................................................AACCATCGACCGTTGATTGTAC....................................................................... 22 0 1 15.00 15 0 4 5 0 6 0
........................................................................AACATTCAACGCTGTCGGTGGGT............................................................................................................. 23 1 2 14.50 29 4 7 14 0 4 0
................................................................................................................ACCATCGACCGTTGATTGTAA....................................................................... 21 1 1 14.00 14 1 4 4 0 5 0
........................................................................AACATTCAACGCTGTCGGGGT............................................................................................................... 21 2 2 13.50 27 0 15 10 0 2 0
........................................................................AACATTCAACGCTATCGGTGAGT............................................................................................................. 23 1 2 13.50 27 4 10 13 0 0 0
........................................................................AACATTCAACGCTGTCGGCGAG.............................................................................................................. 22 1 2 13.00 26 2 3 3 7 11 0
........................................................................GACATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 13.00 26 5 11 6 2 2 0
........................................................................AACATTCAACGCTGTCGGTAT............................................................................................................... 21 2 4 12.75 51 1 3 6 0 41 0
................................................................................................................ACCATCGACCGTTGATTGTACA...................................................................... 22 1 1 12.00 12 0 3 4 1 4 0
........................................................................AACATTCAACGCTGTCGGTGGG.............................................................................................................. 22 1 2 12.00 24 9 2 3 9 1 0
........................................................................AACATTCAATGCTGTCGGTGA............................................................................................................... 21 1 2 12.00 24 0 1 2 2 19 0
........................................................................AACATTCAACGCTGTCAGTGAGT............................................................................................................. 23 1 2 11.50 23 4 7 9 1 2 0
........................................................................AACATTCAGCGCTGTCGGTGAGT............................................................................................................. 23 1 2 11.50 23 1 10 7 2 2 1
........................................................................AGCATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 11.00 22 7 5 7 2 1 0
........................................................................AACATTCAACGCTGCCGGTGAGT............................................................................................................. 23 1 2 10.50 21 5 6 5 1 4 0
........................................................................AACATTCAACGTTGTCGGTGAG.............................................................................................................. 22 1 2 10.50 21 6 0 0 9 5 1
........................................................................AACATTCAACGCCGTCGGTGAGT............................................................................................................. 23 1 2 10.00 20 1 7 10 1 1 0
........................................................................AACACTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 9.50 19 2 9 5 2 1 0
........................................................................AACATTCAATGCTGTCGGTGAG.............................................................................................................. 22 1 2 9.50 19 5 3 1 3 7 0
...........................................................................ATTCAACGCTGTCGGTGAGT............................................................................................................. 20 0 2 9.00 18 0 9 7 2 0 0
........................................................................AACATTCAACGCTGTCGGTTAGT............................................................................................................. 23 1 2 9.00 18 0 3 2 1 12 0
........................................................................AACATTCAACGCTGTCGATGA............................................................................................................... 21 1 2 9.00 18 0 15 2 0 1 0
.......................................................................GAACATTCAACGCTGTCGGTGAGT............................................................................................................. 24 0 2 9.00 18 11 1 1 5 0 0
........................................................................AACATTCAACGCTGTCGGAA................................................................................................................ 20 2 2 9.00 18 1 9 3 2 3 0
........................................................................AACATTCAACGCTGTCGGTGCGT............................................................................................................. 23 1 2 9.00 18 4 1 2 2 9 0
........................................................................AACATTCAACGCTGTCGGGGAGG............................................................................................................. 23 2 2 8.50 17 0 9 7 0 1 0
........................................................................AACATTCAACGCTGTCGGTTA............................................................................................................... 21 1 2 8.50 17 0 1 0 0 16 0
........................................................................AACATTCAACGCTGTCGGTGAC.............................................................................................................. 22 1 2 8.50 17 7 3 0 7 0 0
........................................................................AATATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 8.50 17 1 5 4 0 7 0
........................................................................AACGTTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 8.50 17 6 5 4 2 0 0
........................................................................AACATTCAACGCTGTCGGTGAGTTTTT......................................................................................................... 27 2 2 8.00 16 0 3 8 0 4 1
........................................................................AACATTCAACGCTGTCGGTGAGAT............................................................................................................ 24 1 2 8.00 16 5 1 1 1 8 0
........................................................................AACATTCAACGCTGTCGGAGAGT............................................................................................................. 23 1 2 8.00 16 1 3 3 1 5 3
........................................................................AACATTCAACGTTGTCGGTGA............................................................................................................... 21 1 2 8.00 16 3 4 3 1 5 0
........................................................................AACATTCAACGCTGTCG................................................................................................................... 17 0 2 7.50 15 4 3 1 1 6 0
........................................................................AACATTCAACGCTGTCGGCGA............................................................................................................... 21 1 2 7.50 15 2 0 0 2 9 2
........................................................................AACATTCAACGCTGTTGGTGAG.............................................................................................................. 22 1 2 7.50 15 6 0 1 3 5 0
........................................................................AACCTTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 7.50 15 3 0 0 0 12 0
...............................................................................AACGCTGTCGGTGAGT............................................................................................................. 16 0 2 7.50 15 0 5 3 0 7 0
........................................................................AACATTCAACACTGTCGGTGAGT............................................................................................................. 23 1 2 7.50 15 3 3 6 1 2 0
........................................................................AACCTTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 7.00 14 2 0 0 0 11 1
........................................................................AACATTCAACGCTGTCGGG................................................................................................................. 19 1 2 7.00 14 1 10 1 0 2 0
........................................................................AACATTCAACGCTGTCGGCGAGTT............................................................................................................ 24 1 2 7.00 14 0 3 3 1 6 1
........................................................................AACCTTCAACGCTGTCGGTG................................................................................................................ 20 1 2 7.00 14 0 0 0 0 13 1
................................................................................................................ACCATCGACCGTTGATTGTAT....................................................................... 21 1 1 7.00 7 0 1 3 0 3 0
.................................................................................................................CCATCGACCGTTGATTGTACC...................................................................... 21 0 1 7.00 7 0 4 1 0 2 0
........................................................................AACATTCAACGCTGTCGGTGAGTAT........................................................................................................... 25 1 2 7.00 14 0 1 2 0 7 4
.........................................................................ACATTCAACGCTGTCGGTGAGA............................................................................................................. 22 1 2 6.50 13 1 2 5 2 3 0
........................................................................AACATTGAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 6.50 13 2 2 3 0 6 0
........................................................................AACATTCAACGCTGTCGATGAGTT............................................................................................................ 24 1 2 6.00 12 0 10 2 0 0 0
........................................................................AACATTCAACGCTGTCGATGAGA............................................................................................................. 23 2 2 6.00 12 0 8 4 0 0 0
........................................................................AACATTCAACGCTGTCGGTAAGT............................................................................................................. 23 1 2 6.00 12 1 4 7 0 0 0
.....................................................................ATTAACATTCAACGCTGTCGGTGA............................................................................................................... 24 2 2 6.00 12 0 9 3 0 0 0
...............................................................................................................AACCATCGACCGTTGATTGTACC...................................................................... 23 0 1 6.00 6 2 2 1 1 0 0
........................................................................TACATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 6.00 12 0 8 4 0 0 0
........................................................................AACATTCAACCCTGTCGGTGAG.............................................................................................................. 22 1 2 5.50 11 3 0 0 5 3 0
.........................................................................ACATTCAACGCTGTCGGT................................................................................................................. 18 0 2 5.50 11 0 5 3 0 3 0
.........................................................................ACATTCAACGCTGTCGGTGAGTT............................................................................................................ 23 0 2 5.50 11 0 1 5 0 3 2
........................................................................AACATTCAACGCTGTCGGTGCG.............................................................................................................. 22 1 2 5.50 11 1 0 1 1 7 1
........................................................................AACATTCAACGCTGCCGGTGAG.............................................................................................................. 22 1 2 5.50 11 5 0 1 3 2 0
........................................................................AACATTTAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 5.00 10 2 2 2 0 4 0
.....................................................................ATTAACATTCAACGCTGTCGGTGAGT............................................................................................................. 26 2 2 5.00 10 0 5 5 0 0 0
........................................................................AACATTCAACGCTGTCGGTGTGT............................................................................................................. 23 1 2 5.00 10 2 1 4 0 3 0
.........................................................................ACATTCAACGCTGTCGGTGA............................................................................................................... 20 0 2 5.00 10 1 0 0 0 9 0
........................................................................AACATTCAACGCTATCGGTGAG.............................................................................................................. 22 1 2 5.00 10 5 0 0 2 3 0
........................................................................AACATTCAACGCTCTCGGTGAGT............................................................................................................. 23 1 2 5.00 10 3 0 5 0 2 0
........................................................................AACATCCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 5.00 10 1 6 2 0 1 0
.......................................................................GAACATTCAACGCTGTCGGTG................................................................................................................ 21 0 2 5.00 10 2 0 0 0 8 0
........................................................................AACATTCAACGCTGTCGGTGAGAAA........................................................................................................... 25 3 2 4.50 9 3 3 0 3 0 0
........................................................................AACATTCAACGCTGTCGGGAA............................................................................................................... 21 2 2 4.50 9 0 4 4 0 1 0
........................................................................AACATTCGACGCTGTCGGTGAGT............................................................................................................. 23 1 2 4.50 9 2 2 5 0 0 0
........................................................................AACATTCAACGCTGTCGGCG................................................................................................................ 20 1 2 4.50 9 2 0 0 0 7 0
........................................................................AACATTCAACGCTGTCGGTGAGTTTA.......................................................................................................... 26 1 2 4.50 9 0 3 2 0 0 4
........................................................................AACATTCAACGCTGTCGATGAG.............................................................................................................. 22 1 2 4.50 9 0 5 3 0 1 0
.......................................................................TAACATTCAACGCTGTCGGTGAGT............................................................................................................. 24 1 2 4.50 9 1 5 3 0 0 0
........................................................................AACATTCAACGCTGTCGGAAA............................................................................................................... 21 2 2 4.50 9 0 5 2 0 1 1
........................................................................AACATTCAACGCTGTCGGTGACT............................................................................................................. 23 1 2 4.00 8 3 0 2 1 2 0
................................................................................................................ACCATCGACCGTTGATTGTATT...................................................................... 22 2 1 4.00 4 0 2 1 1 0 0
...........................................................................ATTCAACGCTGTCGGTGAG.............................................................................................................. 19 0 2 4.00 8 3 1 1 1 1 1
........................................................................AACATTCAACGCTGTCGGTGCGTTT........................................................................................................... 25 1 2 4.00 8 0 0 0 0 8 0
........................................................................AACATTCAACGCTGTCGGTGAGCT............................................................................................................ 24 1 2 4.00 8 0 1 0 0 5 2
........................................................................AACATTCAACGCTGTCGGTGGGTT............................................................................................................ 24 1 2 4.00 8 0 1 3 0 3 1
........................................................................AACATTCAACGCTGACGGTGAGT............................................................................................................. 23 1 2 4.00 8 0 3 5 0 0 0
........................................................................AACATTCAACGCTGTCGGTGAGTTC........................................................................................................... 25 1 2 4.00 8 0 3 3 0 2 0
................................................................................................................ACCATCGACCGTTGATTGTACCAAC................................................................... 25 3 1 4.00 4 0 0 0 0 3 1
........................................................................AACATTCAACGCTGTCGGTGTA.............................................................................................................. 22 2 2 4.00 8 4 0 1 1 2 0
........................................................................AACATTCAACGCTGTCGGTGAGTTAT.......................................................................................................... 26 2 2 4.00 8 2 1 3 0 1 1
.........................................................................ACATTCAACGCTGTCGGTG................................................................................................................ 19 0 2 4.00 8 0 2 3 0 3 0
........................................................................AACATTCAACGCTGTCGGC................................................................................................................. 19 1 2 4.00 8 0 3 4 0 1 0
................................................................................................................ACCATCGACCGTTGATTG.......................................................................... 18 0 1 4.00 4 0 1 0 0 3 0
........................................................................AACATTCAACGCTGTCGGTGAAAA............................................................................................................ 24 3 2 3.50 7 1 0 0 2 4 0
........................................................................AACATTCAACGCTGTCGGAG................................................................................................................ 20 1 2 3.50 7 0 0 0 0 7 0
.......................................................................CAACATTCAACGCTGTCGGTGAG.............................................................................................................. 23 1 2 3.50 7 2 1 0 3 1 0
........................................................................AACATTCAACGCTTTCGGTGAGT............................................................................................................. 23 1 2 3.50 7 0 5 1 0 0 1
........................................................................AACATTCAACGCTGTAGGTGAGT............................................................................................................. 23 1 2 3.50 7 1 2 3 1 0 0
........................................................................AACATTCAACGCAGTCGGTGAGT............................................................................................................. 23 1 2 3.50 7 0 2 3 0 2 0
........................................................................AACATTCAACGCTGTCGGTAG............................................................................................................... 21 2 2 3.50 7 0 0 1 0 6 0
........................................................................AACATTCAACGCTGTCGGTGAGTC............................................................................................................ 24 1 2 3.50 7 1 0 0 1 5 0
........................................................................AACATCCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 3.50 7 3 0 0 3 1 0
........................................................................AACATTCAACGCTGTCGGTGCGTT............................................................................................................ 24 1 2 3.50 7 1 0 0 0 4 2
........................................................................AACATTCAACGCTATCGGTGAGTT............................................................................................................ 24 1 2 3.50 7 1 1 3 0 2 0
........................................................................AACATTCAACGCTGTCTGTGAGT............................................................................................................. 23 1 2 3.50 7 1 2 3 0 1 0
........................................................................AACATTCTACGCTGTCGGTGAGT............................................................................................................. 23 1 2 3.50 7 1 2 3 0 1 0
........................................................................AACATTTAACGCTGTCGGTGA............................................................................................................... 21 1 2 3.50 7 1 0 2 0 4 0
........................................................................AACATTCAACGCTGTCGGTGACA............................................................................................................. 23 2 2 3.50 7 1 0 0 0 6 0
........................................................................AACATTCAACGCTGTCGGTGAGTAA........................................................................................................... 25 2 2 3.50 7 0 1 4 0 1 1
.........................................................................ACATTCAACGCTGTCGGTGAGTTT........................................................................................................... 24 0 2 3.50 7 0 1 1 0 5 0
........................................................................AACATTCAACGCTGTCGGTTAG.............................................................................................................. 22 1 2 3.50 7 0 0 0 0 7 0
........................................................................AACATTCAACGCTGTCAGTGAG.............................................................................................................. 22 1 2 3.00 6 2 0 1 0 3 0
........................................................................AACATTCAACGCTGTCGGTAAA.............................................................................................................. 22 2 2 3.00 6 1 1 1 0 3 0
........................................................................AACCTTCAACGCTGTCGGTGA............................................................................................................... 21 1 2 3.00 6 1 0 0 0 5 0
................................................................................................................ACCATCGACCGTTGATTGCACC...................................................................... 22 1 1 3.00 3 0 2 1 0 0 0
........................................................................AATATTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 3.00 6 1 0 1 1 3 0
........................................................................AACATTCAACGCTGTCCGTGAGT............................................................................................................. 23 1 2 3.00 6 1 0 2 2 1 0
........................................................................AACATTCAACGCTGTCGGGA................................................................................................................ 20 2 2 3.00 6 0 1 4 0 1 0
........................................................................AAAATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 3.00 6 1 3 1 0 1 0
................................................................................ACGCTGTCGGTGAGT............................................................................................................. 15 0 2 3.00 6 0 3 2 0 1 0
................................................................................................................ATCATCGACCGTTGATTGTACC...................................................................... 22 1 1 3.00 3 0 2 0 0 1 0
........................................................................AACATTCAACGCTGTCGGTGAGCTT........................................................................................................... 25 1 2 3.00 6 0 0 0 0 6 0
................................................................................................................ACCATCGACCGTTGATTGTACCGAAC.................................................................. 26 3 1 3.00 3 0 0 0 0 3 0
................................................................................................................ACCATCGACCGTTGATTATACC...................................................................... 22 1 1 3.00 3 0 1 2 0 0 0
................................................................................................................ACCATCGACCGTTGATTGTGAAC..................................................................... 23 3 1 3.00 3 0 0 0 0 1 2
........................................................................AACAATCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 3.00 6 1 3 2 0 0 0
........................................................................AACATTCAACCCTGTCGGTGAGT............................................................................................................. 23 1 2 3.00 6 1 3 0 0 2 0
................................................................................................................ACCATCGACCGTTGATTGTACCCGAAC................................................................. 27 3 1 3.00 3 0 0 0 0 3 0
........................................................................AACATTCAACGCCGTCGGTGAG.............................................................................................................. 22 1 2 3.00 6 3 0 1 0 2 0
........................................................................AACATTCAACGCTGTCGGTGATA............................................................................................................. 23 2 2 3.00 6 1 1 0 0 4 0
................................................................................................................ATCATCGACCGTTGATTGTAC....................................................................... 21 1 1 3.00 3 0 0 0 0 3 0
................................................................................................................ACCATCGACTGTTGATTGTACC...................................................................... 22 1 1 3.00 3 0 2 1 0 0 0
................................................................................................................ACCATCAACCGTTGATTGTACC...................................................................... 22 1 1 3.00 3 0 0 3 0 0 0
........................................................................AACGTTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 3.00 6 1 1 2 1 1 0
........................................................................AACATTCAACGTTGTCGGTGAGA............................................................................................................. 23 2 2 3.00 6 0 1 1 2 2 0
........................................................................AACATTCAACGCTGTCGGGGAGTTTT.......................................................................................................... 26 2 2 3.00 6 0 2 3 0 1 0
........................................................................AACATTCAACGCTGTCGGTGTG.............................................................................................................. 22 1 2 3.00 6 1 0 0 2 3 0
........................................................................AACATTCAACGCTGTCGGTGAGTTGT.......................................................................................................... 26 2 2 3.00 6 2 4 0 0 0 0
........................................................................AACATTCAATGCTGTCGGTGAGTT............................................................................................................ 24 1 2 3.00 6 0 1 3 0 2 0
........................................................................ATCATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 3.00 6 0 3 2 0 1 0
........................................................................AACATTTAACGCTGTCGGTGAGA............................................................................................................. 23 2 2 2.50 5 0 1 0 0 4 0
........................................................................AACATTCAGCGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.50 5 2 1 0 1 1 0
........................................................................AGCATTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.50 5 0 1 0 2 2 0
...........................................................................ATTCAACGCTGTCGGTGAGTT............................................................................................................ 21 0 2 2.50 5 0 2 1 0 2 0
........................................................................AACATTCAACGCTGTCGGCGAGA............................................................................................................. 23 2 2 2.50 5 2 0 1 0 2 0
........................................................................AACATTCACCGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.50 5 1 0 0 3 1 0
........................................................................AACATTCAACGCTGTCGGAGAG.............................................................................................................. 22 1 2 2.50 5 0 0 1 0 4 0
........................................................................AACATTCAACGATGTCGGTGAGT............................................................................................................. 23 1 2 2.50 5 2 0 3 0 0 0
........................................................................AACATTCAACGCTGTCGCTGAGT............................................................................................................. 23 1 2 2.50 5 2 1 2 0 0 0
........................................................................AACATTCAACGCTGTTGGTGAGTT............................................................................................................ 24 1 2 2.50 5 0 3 0 0 2 0
........................................................................AACATTCAACGCTCTCGGTGAG.............................................................................................................. 22 1 2 2.50 5 3 0 0 2 0 0
........................................................................AACATTCAACTCTGTCGGTGAGT............................................................................................................. 23 1 2 2.50 5 0 1 3 0 1 0
........................................................................AACATTCAACGCTGTCGGTCAG.............................................................................................................. 22 1 2 2.50 5 1 0 0 1 3 0
........................................................................AACATTCAACGCTGTTGGTG................................................................................................................ 20 1 2 2.50 5 0 3 1 0 1 0
........................................................................AACATTCAACGCTGTCGA.................................................................................................................. 18 1 2 2.50 5 0 4 0 0 1 0
........................................................................AACATACAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.50 5 0 4 1 0 0 0
........................................................................AACATTCAACGCTGTCGGTAAT.............................................................................................................. 22 2 2 2.50 5 0 2 0 0 3 0
........................................................................AACATTCAACGCTGTCGGTAAG.............................................................................................................. 22 1 2 2.50 5 2 0 1 1 1 0
........................................................................AACATTCAACGCTGTCGGTGC............................................................................................................... 21 1 2 2.50 5 0 1 0 0 4 0
.......................................................................CAACATTCAACGCTGTCGGTG................................................................................................................ 21 1 2 2.50 5 0 1 1 0 3 0
................................................................................................................ACCATCGACCGTTGGTTGTACC...................................................................... 22 1 1 2.00 2 0 0 0 0 2 0
........................................................................AACATTCAACGCTGTCGTTGAG.............................................................................................................. 22 1 2 2.00 4 0 0 0 0 4 0
.......................................................................GAACATTCAACGCTGTCGGTA................................................................................................................ 21 1 2 2.00 4 0 0 0 0 4 0
........................................................................AACATTCAACGCTATCGGTGAGA............................................................................................................. 23 2 2 2.00 4 1 2 0 1 0 0
........................................................................AACATTCAACGCTGTCAGTGA............................................................................................................... 21 1 2 2.00 4 0 1 1 0 2 0
.......................................................................GAACATTCAACGCTGTCGGT................................................................................................................. 20 0 2 2.00 4 2 0 0 0 2 0
........................................................................AACATCCAACGCTGTCGG.................................................................................................................. 18 1 2 2.00 4 0 0 0 0 4 0
........................................................................AATATTCAACGCTGTCGGTGAGTT............................................................................................................ 24 1 2 2.00 4 2 0 0 0 2 0
........................................................................AACATTCAACGCTGTCGGTCAGT............................................................................................................. 23 1 2 2.00 4 1 1 0 2 0 0
........................................................................ACCATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.00 4 1 0 0 2 1 0
................................................................................................................ACCATCGACCGTTGATTGTACCA..................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
........................................................................AACATTAAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.00 4 0 1 3 0 0 0
..................................................................................................................CATCGACCGTTGATTGTACC...................................................................... 20 0 1 2.00 2 0 1 1 0 0 0
........................................................................AACATTCAACGCTGTCGATG................................................................................................................ 20 1 2 2.00 4 0 3 1 0 0 0
........................................................................AACATTCAACGCTGTCGGTGAGTTTTGA........................................................................................................ 28 1 1 2.00 2 0 0 0 0 2 0
........................................................................AACATTCGACGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.00 4 3 0 0 0 1 0
....................................GTCAGTGGAATTCCGAGTGTAGAGG............................................................................................................................................... 25 3 1 2.00 2 0 0 0 0 0 2
........................................................................AGCATTCAACGCTGTCGGTGA............................................................................................................... 21 1 2 2.00 4 2 1 1 0 0 0
........................................................................AACATTCAACGCTGTCGGGGAT.............................................................................................................. 22 2 2 2.00 4 0 2 2 0 0 0
................................................................................................................ATCATCGACCGTTGATTGTAT....................................................................... 21 2 1 2.00 2 0 0 0 0 2 0
........................................................................AACATTCAACGCTGTCGGTGATTT............................................................................................................ 24 1 2 2.00 4 0 0 0 0 4 0
........................................................................AACATTCACCGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.00 4 4 0 0 0 0 0
........................................................................CACATTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.00 4 1 1 0 1 1 0
....................................GTCAGTGGAATTCCGAGTGTAGAGGT.............................................................................................................................................. 26 3 1 2.00 2 0 0 0 0 0 2
........................................................................AACATTCAACGCTGTCGGAGA............................................................................................................... 21 1 2 2.00 4 0 0 0 0 4 0
........................................................................AACATTCACCGCTGTCGGTG................................................................................................................ 20 1 2 2.00 4 0 0 0 0 4 0
........................................................................AACATTTAACGCTGTCGGTG................................................................................................................ 20 1 2 2.00 4 0 2 0 0 2 0
................................................................................................................ACCATCGACCGTTGATTGTACCGC.................................................................... 24 2 1 2.00 2 0 0 0 0 2 0
........................................................................AACATTCCACGCTGTCGGTGAGT............................................................................................................. 23 1 2 2.00 4 1 1 0 2 0 0
........................................................................ACCATTCAACGCTGTCGGTG................................................................................................................ 20 1 2 2.00 4 0 0 0 0 4 0
................................................................................................................ACCATCGACCGTTGATT........................................................................... 17 0 1 2.00 2 0 0 0 0 2 0
........................................................................AACATTCAACGCTGTCGGTGAGTTAA.......................................................................................................... 26 2 2 2.00 4 1 0 1 0 2 0
...............................................................GCATGGGTGAACATTCAACGCTGTCGGT................................................................................................................. 28 3 1 2.00 2 0 0 2 0 0 0
........................................................................AACATTCAACGCTGTCGGTGTAA............................................................................................................. 23 3 2 2.00 4 1 0 0 0 3 0
................................................................................................................ACCATCGACCGTTGATTGTACCTCT................................................................... 25 3 1 2.00 2 0 2 0 0 0 0
........................................................................AACATTCAACGTTGTCGGTGAGTTT........................................................................................................... 25 1 2 2.00 4 0 1 1 0 2 0
...........................................................................ATTCAACGCTGTCGGTGAGA............................................................................................................. 20 1 2 2.00 4 0 1 2 1 0 0
........................................................................ACCATTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.00 4 1 0 0 1 1 1
........................................................................AACATCCAACGCTGTCGGTG................................................................................................................ 20 1 2 2.00 4 0 1 0 0 3 0
........................................................................AACATTCAGCGCTGTCGGTGAGTT............................................................................................................ 24 1 2 2.00 4 0 1 1 0 1 1
........................................................................AACATTCAACGCTGTCGATGAGTTT........................................................................................................... 25 1 2 2.00 4 0 3 1 0 0 0
........................................................................AACATTCAACGCTTTCGGTGAGTTT........................................................................................................... 25 1 2 2.00 4 0 0 0 0 3 1
........................................................................AACATTCAGCGCTGTCGGTGAGA............................................................................................................. 23 2 2 2.00 4 0 1 2 0 0 1
................................................................................................................ACCATCTACCGTTGATTGTACC...................................................................... 22 1 1 2.00 2 0 0 0 0 2 0
........................................................................AACACTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 2.00 4 2 0 0 2 0 0
........................................................................AACATTCAACGCTGTCGTTGAGT............................................................................................................. 23 1 2 2.00 4 1 1 0 0 2 0
...................................................................................................................ATCGACCGTTGATTGTACC...................................................................... 19 0 1 2.00 2 0 0 1 0 1 0
........................................................................AACATTCAACGCTGCCGGTG................................................................................................................ 20 1 2 2.00 4 1 0 1 0 2 0
...............................................................................AACGCTGTCGGTGAG.............................................................................................................. 15 0 3 1.67 5 0 1 0 0 4 0
........................................................................AACATTCAACGCTGTCGGGGAGGTT........................................................................................................... 25 2 2 1.50 3 0 2 1 0 0 0
........................................................................AACATTCAACGCTGTCGGTGCGA............................................................................................................. 23 2 2 1.50 3 2 0 0 0 0 1
........................................................................AATATTCAACGCTGTCGGTGAGA............................................................................................................. 23 2 2 1.50 3 0 0 1 0 2 0
.......................................................................CAACATTCAACGCTGTCGGT................................................................................................................. 20 1 2 1.50 3 0 2 1 0 0 0
........................................................................AACATTCAACGCTGTCGGTGGGTTT........................................................................................................... 25 1 2 1.50 3 0 0 1 0 2 0
........................................................................AACATTCAACGCTGACGGTGAG.............................................................................................................. 22 1 2 1.50 3 1 0 0 0 2 0
........................................................................AACATTCATCGCTGTCGGTGAGT............................................................................................................. 23 1 2 1.50 3 0 3 0 0 0 0
........................................................................AACATTCAACGCTGTCGGGGAGGT............................................................................................................ 24 2 2 1.50 3 0 2 1 0 0 0
........................................................................AACATTTAACGCTGTCGGTGAGTT............................................................................................................ 24 1 2 1.50 3 0 1 0 0 2 0
.............................................................................TCAACGCTGTCGGTGAGT............................................................................................................. 18 0 2 1.50 3 1 0 1 0 1 0
........................................................................AACATTCAACGCTGTCGGTGAGGTTT.......................................................................................................... 26 2 2 1.50 3 0 0 2 0 1 0
........................................................................AACATTCAACGCTGTCGGTGAGAG............................................................................................................ 24 2 2 1.50 3 1 0 0 0 2 0
........................................................................AACACTCAACGCTGTCGGTGA............................................................................................................... 21 1 2 1.50 3 0 1 1 0 1 0
........................................................................GACATTCAACGCTGTCGGTGAG.............................................................................................................. 22 1 2 1.50 3 1 0 0 2 0 0
........................................................................AACATTCAACGCTGTCGGTGAGTTTTTT........................................................................................................ 28 3 2 1.50 3 0 1 2 0 0 0
.....................................................................ATTAACATTCAACGCTGTCGGGGAGT............................................................................................................. 26 3 2 1.50 3 0 3 0 0 0 0
.......................................................................GAACATTCAACGCTGTCGGTGT............................................................................................................... 22 1 2 1.50 3 2 0 0 0 1 0
........................................................................AACATTCAACGTTGTCGGTGAA.............................................................................................................. 22 2 2 1.50 3 2 1 0 0 0 0
........................................................................AACATTCATCGCTGTCGGTGA............................................................................................................... 21 1 2 1.50 3 2 1 0 0 0 0
........................................................................AACATTCAACGCTGTCGGTGAGAC............................................................................................................ 24 2 2 1.50 3 0 0 1 0 2 0
........................................................................AACATCCAACGCTGTCGGTGAGTT............................................................................................................ 24 1 2 1.50 3 0 2 0 0 1 0
........................................................................AACATTCAACGCTGTCGGTGGGA............................................................................................................. 23 2 2 1.50 3 0 1 1 0 1 0
........................................................................AACTTTCAACGCTGTCGGTGAGT............................................................................................................. 23 1 2 1.50 3 0 0 3 0 0 0
........................................................................AACATTCAATGCTGTCGGTGAGA............................................................................................................. 23 2 2 1.50 3 1 0 0 2 0 0
........................................................................AACATTCAACTCTGTCGGTGA............................................................................................................... 21 1 2 1.50 3 0 0 1 1 1 0
........................................................................AACATTCAACGCTGTCGGCGT............................................................................................................... 21 2 2 1.50 3 0 0 1 0 2 0
........................................................................AACATTCAAAGCTGTCGGTGAGT............................................................................................................. 23 1 2 1.50 3 0 2 0 1 0 0
........................................................................AACATTCAACGTTGTCGGTGT............................................................................................................... 21 2 2 1.50 3 0 2 0 0 1 0
........................................................................AACATTCAACGCTGTCGGTGAGTAGT.......................................................................................................... 26 3 2 1.50 3 0 2 1 0 0 0
........................................................................AACATTCAACGCTGTCGGCGAGTTT........................................................................................................... 25 1 2 1.50 3 1 2 0 0 0 0
........................................................................AACATTCAACGCTGTCGGTGAGATT........................................................................................................... 25 1 2 1.50 3 0 1 1 0 1 0
........................................................................AACATTCAACGCTGTCGGTGAAAT............................................................................................................ 24 2 2 1.50 3 0 0 1 0 2 0
.........................................................................ACATTCAACGCTGTCGATGAGT............................................................................................................. 22 1 2 1.50 3 0 3 0 0 0 0
........................................................................AACATTCAACGCTGTCGGTTAGTT............................................................................................................ 24 1 2 1.50 3 0 0 0 0 2 1
........................................................................AACATTCAACGCTGTCGGTGAGTG............................................................................................................ 24 1 2 1.50 3 2 1 0 0 0 0
...............................................................................AACGCTGTCGGTGAGTTT........................................................................................................... 18 0 2 1.50 3 0 1 0 0 2 0
........................................................................AACATTCAACACTGTCGGTGAG.............................................................................................................. 22 1 2 1.50 3 2 0 0 0 1 0
........................................................................AACATTCGACGCTGTCGGTGAGTT............................................................................................................ 24 1 2 1.50 3 0 0 1 0 2 0
........................................................................GACATTCAACGCTGTCGGTGA............................................................................................................... 21 1 2 1.50 3 0 0 1 1 1 0
.......................................................................CAACATTCAACGCTGTCGGTGAGTT............................................................................................................ 25 1 2 1.50 3 1 2 0 0 0 0
........................................................................TACATTCAACGCTGTCGGTGAGTTT........................................................................................................... 25 1 2 1.50 3 0 0 2 0 1 0

Anti-sense strand reads

GGGGGCGGGGAAAGTCTAAGAGTGTCTATGACATTTCAGTCGCCTTAAGACTCAAATCTCCAACGAAGTCACTTGTAAGTTGCGACAGCCACTCAAACCTTAAGTTTAGTTTTGGTAGCTGGCAACTAACATGGGATACCGGTTGGTAGTCGAGGTGTTACCGAAAGGCCTAAACGACTTCTGTCCTTTGGTGTCGTCCTGGAA

*******************************************************..(((((((..((...(((.((((((..(((((((.((((.((.......)).))))))))))))))))).)))...))..)).)))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR1274764

testes
.........................................................................TGTAAGTTGCGACAGCCACTCA............................................................................................................. 22 0 2 1.00 2 2 0 0
.........................................................................TGTAAGTTGCGACAGCCACTC.............................................................................................................. 21 0 2 0.50 1 0 0 1
........................................................................TTGTAAGTTGCGACAGCCACTCA............................................................................................................. 23 0 2 0.50 1 0 1 0

Generated: 09/01/2015 at 11:23 AM