ID:

ssc-mir-17

Coordinate:

chr11:66610060-66610136 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.4 -34.9 -34.7

Sense Strand Reads

AGCAGGAATAAAGAGACCATCACCTTGTAAACCTGAAGACTGACCAGTCAGAATAATGTCAAAGTGCTTACAGTGCAGGTAGTGATAATGTGCATCTACTGCAGTGAAGGCACTTGTAGCATTATGGTGACAGCTGCCTCGGGAAGCCAAGGTGGGCTTGAAAGCGCAGGGTCTGCT

********************************************..((((..(((((((..((((((((.((.(((((.(((((........)).)))))))).)).))))))))...)))))))..))))...*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
SRR139075

testes
SRR1274763

ovary
SRR139076

testes
SRR1274764

testes
...........................................................CAAAGTGCTTACAGTGCAGGTAG............................................................................................... 23 0 1 13173.00 13173 6227 5690 829 189 182 56
.................................................................................................ACTGCAGTGCAGGCACTTGTGG.......................................................... 22 2 2 5750.00 11500 5565 5935 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTA................................................................................................ 22 0 1 2958.00 2958 1382 1068 463 22 21 2
...........................................................CAAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 24 0 1 2082.00 2082 907 974 33 77 28 63
...........................................................CAAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 24 1 1 1536.00 1536 721 768 13 10 13 11
...........................................................CAAAGTGCTTACAGTGCAGGTAT............................................................................................... 23 1 1 1207.00 1207 512 394 256 15 27 3
...........................................................CAAAGTGCTTACAGTGCAGGT................................................................................................. 21 0 1 1083.00 1083 339 243 446 25 26 4
.................................................................................................ACTGCAGTGCAGGCACTTGTGGC......................................................... 23 2 1 366.00 366 169 197 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGG.................................................................................................. 20 0 1 314.00 314 127 111 59 10 6 1
...........................................................CAAAGTGCTTACAGTGCAGGTAA............................................................................................... 23 1 1 244.00 244 66 61 92 10 15 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAG.......................................................... 22 0 1 195.00 195 13 5 164 5 7 1
.................................................................................................ACTGCAGTGAAGGCACTTGT............................................................ 20 0 1 185.00 185 3 0 158 4 17 3
.................................................................................................ACTGCAGTGAAGGCACTTGTAGC......................................................... 23 0 1 168.00 168 98 33 27 4 4 2
...........................................................CAAAGTGCTTACAGTGCAGGA................................................................................................. 21 1 1 154.00 154 104 41 8 1 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAA............................................................................................. 25 2 1 100.00 100 43 49 2 3 2 1
.................................................................................................ACTGCAGTGAAGGCACTTGTA........................................................... 21 0 1 93.00 93 0 0 79 6 4 4
.................................................................................................ACTGCAGTGCAGGCACTTGTGGAA........................................................ 24 3 2 80.50 161 95 66 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGA......................................................... 23 1 1 63.00 63 42 13 6 0 2 0
..........................................................TCAAAGTGCTTACAGTGCAGGT................................................................................................. 22 0 1 63.00 63 21 9 20 8 3 2
..........................................................TCAAAGTGCTTACAGTGCAGGTA................................................................................................ 23 0 1 54.00 54 31 13 4 3 3 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAT............................................................................................ 26 3 3 51.33 154 76 77 1 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTAG............................................................................................... 22 0 2 51.00 102 32 35 31 0 4 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTT............................................................................................. 25 1 1 49.00 49 26 23 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTT................................................................................................ 22 1 1 47.00 47 13 9 21 1 2 1
.................................................................................................ACTGCAGTGAAGGCACTTG............................................................. 19 0 1 44.00 44 0 0 40 0 3 1
..........................................................TCAAAGTGCTTACAGTGCAGGTAT............................................................................................... 24 1 1 37.00 37 13 17 5 0 2 0
..........................................................TCAAAGTGCTTACAGTGCAGGTAG............................................................................................... 24 0 1 35.00 35 16 13 1 2 0 3
...........................................................TAAAGTGCTGACAGTGCAGATAGT.............................................................................................. 24 3 4 30.75 123 66 54 0 0 3 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTA............................................................................................. 25 1 1 29.00 29 12 14 0 3 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAA.......................................................... 22 1 1 28.00 28 1 1 24 0 2 0
...........................................................CAAAGTGCTTACAGTGCAG................................................................................................... 19 0 1 26.00 26 3 5 18 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTATT.............................................................................................. 24 1 1 26.00 26 8 14 0 2 0 2
...........................................................CAAAGTGCTTACAGTGCAGGTAAA.............................................................................................. 24 2 1 25.00 25 8 9 8 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGG.................................................................................................. 21 0 1 21.00 21 8 11 2 0 0 0
...............................................................GTGCTTACAGTGCAGGTAG............................................................................................... 19 0 2 21.00 42 23 19 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGAAT....................................................... 25 3 2 20.00 40 23 17 0 0 0 0
............................................................AAAGTGCTGACAGTGCAGATA................................................................................................ 21 2 8 19.25 154 73 75 6 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAC............................................................................................ 26 3 1 19.00 19 8 10 0 1 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCA........................................................ 24 2 1 19.00 19 15 4 0 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 23 0 1 18.00 18 4 8 3 1 1 1
...........................................................CAAAGTGCTTACAGTGCAGGTAGC.............................................................................................. 24 1 2 16.00 32 16 13 2 1 0 0
...........................................................CAAAGTGCTGACAGTGCAGATA................................................................................................ 22 2 2 16.00 32 18 13 1 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGAA........................................................ 24 1 1 15.00 15 4 8 3 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTA................................................................................................ 21 0 2 14.50 29 14 4 10 0 1 0
.......................................CTGACCAGTCAGAATAATGT...................................................................................................................... 20 0 1 14.00 14 0 0 11 0 3 0
...........................................................CAAAGTGCTTATAGTGCAGGTAG............................................................................................... 23 1 2 13.00 26 17 6 1 0 2 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGA.......................................................... 22 3 19 12.89 245 114 131 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAA............................................................................................ 26 2 1 12.00 12 2 7 0 0 1 2
...........................................................CAAAGTGCTTACAGCGCAGGTAG............................................................................................... 23 1 1 12.00 12 3 7 2 0 0 0
..........................................................CCAAAGTGCTTACAGTGCAGGTAG............................................................................................... 24 1 2 11.50 23 12 10 1 0 0 0
............................................................AAAGTGCTTACAGTGCAGGT................................................................................................. 20 0 2 11.00 22 2 0 20 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTAG.......................................................... 22 1 1 11.00 11 4 7 0 0 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAGC......................................................... 22 0 1 10.00 10 5 2 1 1 0 1
...........................................................TAAAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 3 10.00 30 6 22 2 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 25 1 1 10.00 10 4 6 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTG................................................................................................ 22 1 1 10.00 10 5 0 3 0 1 1
...........................................................CAAAGTGCTTACAGTGCAGGTAC............................................................................................... 23 1 1 10.00 10 6 4 0 0 0 0
................................................................TGCTTACAGTGCAGGTAG............................................................................................... 18 0 2 9.00 18 9 9 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGT......................................................... 23 3 7 8.57 60 33 27 0 0 0 0
...........................................................CAAAGTACTTACAGTGCAGGTAG............................................................................................... 23 1 1 8.00 8 5 3 0 0 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAG.......................................................... 21 0 1 8.00 8 0 0 7 0 0 1
................................................................................................TACTGCAGTGAAGGCACTTGTA........................................................... 22 0 1 8.00 8 0 0 6 1 1 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAG............................................................................................. 25 1 1 8.00 8 5 2 0 1 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGG.............................................................................................. 24 1 2 8.00 16 8 8 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCTGGTAG............................................................................................... 23 1 1 8.00 8 3 3 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCA.................................................................................................... 18 0 1 8.00 8 1 0 7 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGCA................................................................................................ 22 1 1 8.00 8 1 2 5 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTTT............................................................................................... 23 2 1 7.00 7 2 2 2 1 0 0
...........................................................CAAAGTGCTTACAGTGCAGGCAG............................................................................................... 23 1 1 7.00 7 1 3 2 0 1 0
...........................................................CTAAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 7.00 7 2 4 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCGGGTAG............................................................................................... 23 1 1 7.00 7 4 3 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTGA............................................................................................... 23 2 1 7.00 7 3 3 1 0 0 0
..........................................................ACAAAGTGCTTACAGTGCAGGTAG............................................................................................... 24 1 1 7.00 7 2 1 2 0 2 0
.................................................................................................ACTGCAGTGCAGGCACTTGTG........................................................... 21 2 7 6.57 46 23 23 0 0 0 0
...........................................................CAAAGTGCTCACAGTGCAGGTAGT.............................................................................................. 24 1 2 6.50 13 1 5 4 0 1 2
............................................................AAAGTGCTTACAGTGCAGGTAT............................................................................................... 22 1 2 6.50 13 3 1 7 0 2 0
................................................................................................TACTGCAGTGAAGGCACTTGTAG.......................................................... 23 0 1 6.00 6 0 0 4 0 1 1
...........................................................CGAAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 6.00 6 4 0 2 0 0 0
...........................................................CACAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 6.00 6 0 0 4 0 2 0
...................................................................................................TGCAGTGAAGGCACTTGTAGAC........................................................ 22 2 1 6.00 6 0 0 6 0 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAGA......................................................... 22 1 1 6.00 6 4 0 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGT.................................................................................................. 20 1 1 6.00 6 2 1 3 0 0 0
...............................................................GTGCTTACAGTGCAGGTAGT.............................................................................................. 20 0 1 6.00 6 1 5 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGAAA....................................................... 25 2 1 6.00 6 0 6 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAAT.............................................................................................. 24 1 1 6.00 6 3 1 0 2 0 0
........................................TGACCAGTCAGAATAATGT...................................................................................................................... 19 0 1 6.00 6 0 0 6 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGCT........................................................ 24 1 1 6.00 6 0 0 3 1 1 1
..................................................................................................CTGCAGTGCAGGCACTTGTGG.......................................................... 21 2 12 5.58 67 30 37 0 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 23 1 2 5.50 11 4 5 2 0 0 0
...........................................................CAAAGTGCTTACAGTACAGGTAG............................................................................................... 23 1 1 5.00 5 2 2 1 0 0 0
...........................................................CAAAGTGCTTACAGTGTAGGTAG............................................................................................... 23 1 1 5.00 5 0 3 2 0 0 0
...........................................................CAAAGTGCTTACAGTACAGGTA................................................................................................ 22 1 1 5.00 5 3 2 0 0 0 0
...........................................................CAAGGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 5.00 5 2 3 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGT............................................................ 20 1 1 5.00 5 3 1 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGGAG............................................................................................... 23 1 1 5.00 5 1 1 3 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGAA................................................................................................ 22 1 1 5.00 5 4 0 1 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGT......................................................... 23 1 1 5.00 5 2 0 1 1 1 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCT........................................................ 24 3 4 5.00 20 10 10 0 0 0 0
...........................................................CAAAGTGCTTACGGTGCAGGTAG............................................................................................... 23 1 1 5.00 5 3 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAAG.............................................................................................. 24 2 2 5.00 10 5 5 0 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTAA............................................................................................... 22 1 2 4.50 9 0 0 9 0 0 0
...........................................................TAAAGTGCTGACAGTGCAGGTA................................................................................................ 22 2 4 4.25 17 10 7 0 0 0 0
...........................................................CAAATTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................................................................CTGCAGTGCAGGCACTTGTGGCAT....................................................... 24 2 1 4.00 4 2 2 0 0 0 0
...........................................................CAGAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0
...........................................................CAAAGTGCTTACATTGCAGGTAG............................................................................................... 23 1 1 4.00 4 2 1 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGCAT............................................................................................... 23 2 1 4.00 4 0 1 2 0 1 0
...........................................................CAAAGTGCTTACAGTGCAGATAG............................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAGA............................................................................................ 26 1 1 4.00 4 2 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGGA................................................................................................ 22 1 1 4.00 4 2 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTCCAGGTAG............................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
...........................................................CACAGTGCTTACAGTGCAGGT................................................................................................. 21 1 1 4.00 4 0 0 3 0 1 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCTTT...................................................... 26 3 1 4.00 4 0 4 0 0 0 0
...........................................................CATAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 4.00 4 2 1 1 0 0 0
...........................................................CAAAGTGTTTACAGTGCAGGTAG............................................................................................... 23 1 1 4.00 4 0 0 4 0 0 0
...........................................................CAAAGTGCTTACAGTGCAAGTAG............................................................................................... 23 1 1 4.00 4 2 1 0 0 1 0
...........................................................CAAAGCGCTTACAGTGCAGGTA................................................................................................ 22 1 1 4.00 4 1 2 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTC................................................................................................ 22 1 1 4.00 4 0 1 3 0 0 0
...........................................................CAACGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 4.00 4 0 1 3 0 0 0
...........................................................CAAAGTGCTTATAGTGCAGGTA................................................................................................ 22 1 2 4.00 8 6 1 1 0 0 0
...........................................................CAAAGTGCTGTCCGTGCAGGTAG............................................................................................... 23 3 3 3.67 11 6 5 0 0 0 0
...........................................................CAAAGTGCTTACAGTGC..................................................................................................... 17 0 2 3.50 7 0 0 7 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAGC............................................................................................ 26 2 1 3.00 3 1 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTTCAGGTAG............................................................................................... 23 1 1 3.00 3 1 1 1 0 0 0
...........................................................CAAAGTGCCTACAGTGCAGGTAG............................................................................................... 23 1 1 3.00 3 1 1 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTAA............................................................................................ 26 1 1 3.00 3 1 2 0 0 0 0
...........................................................CAAAGTGCTTACAATGCAGGTAG............................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAT.......................................................... 22 1 1 3.00 3 2 0 1 0 0 0
...........................................................CAAAGTGCTTACAGGGCAGGT................................................................................................. 21 1 1 3.00 3 0 0 3 0 0 0
..........................................................CCAAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 25 1 1 3.00 3 0 3 0 0 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAGCA........................................................ 23 0 1 3.00 3 0 0 3 0 0 0
...........................................................CAAAGTGCTTGCAGTGCAGGTAG............................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
..................................................................................................CTGCAGTGCAGGCACTTGTGGCA........................................................ 23 2 3 3.00 9 3 6 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACT............................................................... 17 0 1 3.00 3 0 0 2 1 0 0
................................................................................................TACTGCAGTGCAGGCACTTGTGG.......................................................... 23 2 2 3.00 6 3 3 0 0 0 0
...........................................................CCAAGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 3.00 3 0 1 2 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTAA............................................................................................... 24 1 1 3.00 3 1 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGAAT............................................................................................... 23 2 1 3.00 3 0 1 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTATA.............................................................................................. 24 2 1 3.00 3 0 0 3 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGA................................................................................................. 22 1 1 3.00 3 2 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTC............................................................................................. 25 1 1 3.00 3 3 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTAT............................................................................................ 26 2 1 3.00 3 2 0 1 0 0 0
...........................................................CAAAGTGCTTGCAGTGCAGGTA................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGC................................................................................................. 21 1 1 3.00 3 1 1 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAG............................................................................................ 26 3 1 3.00 3 1 2 0 0 0 0
...........................................................CAAAGTGCTGTCCGTGCAGGTAGT.............................................................................................. 24 3 1 3.00 3 3 0 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCTT....................................................... 25 3 1 3.00 3 2 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGCAGA.............................................................................................. 24 2 1 3.00 3 1 2 0 0 0 0
...........................................................TAAAGTGCTGACAGTGCAGGTAG............................................................................................... 23 2 4 2.75 11 6 5 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAT............................................................................................. 25 2 3 2.67 8 4 4 0 0 0 0
...........................................................TAAAGTGCTTACAGTGCAGGTA................................................................................................ 22 1 3 2.67 8 3 2 3 0 0 0
.................................................................................................ACTGCAGTGTAGGCACTTGTGG.......................................................... 22 2 3 2.67 8 4 4 0 0 0 0
.............................................................AAGTGCTTACAGTGCAGGTAG............................................................................................... 21 0 2 2.50 5 2 2 0 0 1 0
...........................................................TAAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 24 1 2 2.50 5 2 3 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAGT............................................................................................ 26 2 1 2.00 2 2 0 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGAAT....................................................... 25 1 1 2.00 2 1 1 0 0 0 0
...........................................................CGAAGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAATGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
...........................................................CAAAGCGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................CAAAGAGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGCGCAGGTAGT.............................................................................................. 24 1 1 2.00 2 0 1 1 0 0 0
...........................................................CAAAGTGCATACAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
.........................................................CACAAAGTGCTTACAGTGCAGGTAG............................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCAAT...................................................... 26 3 1 2.00 2 1 1 0 0 0 0
...........................................................CAGAGTGCTTACAGTGCAGGT................................................................................................. 21 1 1 2.00 2 1 0 0 0 1 0
...........................................................CAAAGTGCTTATAGTGCAGGTAGA.............................................................................................. 24 2 2 2.00 4 1 3 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTAAT........................................................................................... 27 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAGGTGCTTACAGTGCAGGT................................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
...........................................................CAAAGTGCTTAAAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCATGTAGT.............................................................................................. 24 1 1 2.00 2 1 1 0 0 0 0
..........................................................ACAAAGTGCTTACAGTGCAGGTA................................................................................................ 23 1 1 2.00 2 1 0 1 0 0 0
...........................................................CAAAGTGCTTACACTGCAGGTAG............................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
...........................................................CAATGTGCTTACAGTGCAGGTAGT.............................................................................................. 24 1 1 2.00 2 1 1 0 0 0 0
..............................................................AGTGCTTACAGTGCAGGTAG............................................................................................... 20 0 2 2.00 4 1 2 1 0 0 0
.................................................................................................ACTGCAGCGAAGGCACTTGT............................................................ 20 1 1 2.00 2 0 0 1 0 1 0
..................................................................................................CTGCAGTGAAGGCACTTGTA........................................................... 20 0 1 2.00 2 1 0 1 0 0 0
...........................................................CAAAGTGCTAACAGTGCAGGTAGT.............................................................................................. 24 1 1 2.00 2 0 2 0 0 0 0
...........................................................CACAGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 2.00 2 0 0 1 0 1 0
...........................................................CAAAGTGTTTACAGTGCAGGTA................................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0
................................................................................................TACTGCAGTGAAGGCACTTGTAGA......................................................... 24 1 1 2.00 2 0 0 2 0 0 0
...................................................................................................TGCAGTGAAGGCACTTGTAGAAC....................................................... 23 2 1 2.00 2 1 0 1 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTT................................................................................................ 23 1 1 2.00 2 1 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCCGGTAG............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGG................................................................................................. 21 1 1 2.00 2 0 0 2 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTATT.............................................................................................. 25 1 1 2.00 2 2 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGCAGT.............................................................................................. 24 1 1 2.00 2 0 1 0 0 1 0
.................................................................................................ACTGCAGTGAAGGCACTTGA............................................................ 20 1 1 2.00 2 0 0 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGGAGT.............................................................................................. 24 1 1 2.00 2 1 0 0 0 1 0
...........................................................CAAAGTGCTTACAGGGCAGGTAT............................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGAAG............................................................................................... 23 1 1 2.00 2 0 1 1 0 0 0
...........................................................CAAAGTGCTTACAGGGCAGGTAG............................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTATT........................................................................................... 27 2 1 2.00 2 1 0 0 1 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAGCT........................................................ 23 1 1 2.00 2 0 0 0 1 0 1
...........................................................CAAAGTGCTTACAGTGCCGGTA................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTATAGTGCAGGTAGT.............................................................................................. 24 1 2 2.00 4 1 2 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTTA............................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0
.................................................................GCTTACAGTGCAGGTAG............................................................................................... 17 0 2 2.00 4 3 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGATA................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
............................................................CAAGTGCTTACAGTGCAGGTAG............................................................................................... 22 1 2 2.00 4 2 1 1 0 0 0
........................................................ATTCAAAGTGCTTACAGTGCAGGTAT............................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAAA........................................................................................... 27 3 1 2.00 2 0 0 0 1 0 1
...........................................................CAAAGTGCTTACGGTGCAGGTAT............................................................................................... 23 2 1 2.00 2 1 0 0 0 0 1
...........................................................CAAAGTGTTTACAGTGCAGGTAT............................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTT........................................................... 21 1 1 2.00 2 0 0 0 0 2 0
...........................................................CAAAGTGCTTACGGTGCAGGTA................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
........................................................TTACAAAGTGCTTACAGTGCAGGTAG............................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
................................................................................................TACTGCAGTGAAGGTACTTGTAG.......................................................... 23 1 1 2.00 2 0 0 2 0 0 0
...........................................................CAGAGTGCTTACAGTGCAGGTAGT.............................................................................................. 24 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGAT................................................................................................ 22 2 2 2.00 4 2 0 0 2 0 0
.................................................................................................ACTGCAGTGAAGGCACTT.............................................................. 18 0 1 2.00 2 0 0 1 0 1 0
...........................................................CAAAGTGCTTACAGTGCGGGTAGA.............................................................................................. 24 2 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTTCTTACAGTGCAGGTAA............................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
...........................................................CAAAGTCCTTACAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 1 0 1 0 0 0
.................................................................................................ACTTCAGTGAAGGCACTTGTAG.......................................................... 22 1 1 2.00 2 1 0 1 0 0 0
...........................................................CAAAGTGCGTACAGTGCAGGTAG............................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTGGA.............................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0
...........................................................CAAAGTGCTTACAGCGCAGGT................................................................................................. 21 1 1 2.00 2 0 1 1 0 0 0
...........................................................CAAAGTGCTTACACTGCAGGTA................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTTT............................................................................................ 26 2 3 1.67 5 2 2 0 1 0 0
........................................................................................................TGAAGGCACTTGTAGC......................................................... 16 0 3 1.67 5 3 1 0 0 0 1
...............................................................GTGCTTACAGTGCAGGTAGA.............................................................................................. 20 1 3 1.67 5 1 4 0 0 0 0
........................................................TTACAAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 27 3 2 1.50 3 2 1 0 0 0 0
...............................................................GTGCTTACAGTGCAGGTA................................................................................................ 18 0 2 1.50 3 2 1 0 0 0 0
...........................................................CAAAGTGCTGACAGTGCAGAT................................................................................................. 21 2 6 1.17 7 5 2 0 0 0 0
..................................................................................................CTGCAGTGCAGGCACTTGTGGAA........................................................ 23 3 6 1.17 7 3 4 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTCGTGG.......................................................... 22 3 8 1.13 9 3 6 0 0 0 0
..................................................................CTTACAGTGCAGGTAG............................................................................................... 16 0 2 1.00 2 2 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTTG............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACTGCAGTAAAGGCACTTGTAG.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................................................................CTGCAGTGAAGGCACTTGTAGT......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAACTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................GTGCTTACAGTGCAGG.................................................................................................. 16 0 2 1.00 2 2 0 0 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGAA................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................ACTGCAGTGAAGGCACTTGTAGCTT....................................................... 25 1 1 1.00 1 0 0 0 0 1 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTAAAT.......................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACTGCAGTGAAAGCACTTGTAGC......................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGCGCTTACAGTGCAGGTAGA.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTACTTACAGTGCAGGTAT............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................CCAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................GCAGTGAAGGCACTTGTAGC......................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGA.................................................................................................. 20 1 2 1.00 2 1 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCTGGTAA............................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTACAGGTAT............................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGGAGA.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
............................................................AAAGTGCTGACAGTGCAGATAG............................................................................................... 22 2 4 1.00 4 2 2 0 0 0 0
.......................................................AAAACAAAGTGCTTACAGTGCAGGT................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTAAC........................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTGCTTACAGAGCAGGT................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCATGT................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAC............................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTGCCTACAGTGCAGGTAT............................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
...........................................................CAAAGTGCTTACAGAGCAGGTAGT.............................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................CTAAGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAATGCTTACAGTGCAGGTA................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTCCTTACAGTGCAGGTAGT.............................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGGGCTTACAGTGCAGGTAA............................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAAAT........................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0
............................................................AAAGTGCTTACAGTGCAGG.................................................................................................. 19 0 2 1.00 2 0 0 2 0 0 0
...........................................................CAAAGTGCTTACAGTGCATGTA................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAAGTA................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAGTGCAGGCACTTGTGGCATT...................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................TCAAAGTGCTTACAGTGCAGGTAAT.............................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................CTGCAGTGCAGGCACTTGTGGCATT...................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGGGCAGGTA................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................CACCGTGCTTACAGTGCAGGTA................................................................................................ 22 2 1 1.00 1 0 0 0 0 1 0
................................................................................................TACTGCAGTGCAGGCACTTGT............................................................ 21 1 1 1.00 1 0 0 0 0 1 0
..........................................................ACAAAGCGCTTACAGTGCAGGTAG............................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0
...........................................................CAAAGTGCATACAGTGCAGGTA................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTCG............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACTGTAGTGAAGGCACTTGT............................................................ 20 1 2 1.00 2 0 0 2 0 0 0
...........................................................CACAGTGCTTACAGTGCAGGTAGT.............................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAAAG............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCACGTAG............................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
...........................................................CAAAGTGCTTACAGTGCTGGTAGT.............................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGATAA............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................CCAAAGTGCTTACAGTGCAGGTA................................................................................................ 23 1 2 1.00 2 1 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCCGGT................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAATGCAGGCAGT.............................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................CAACGTGCTTACAGTGCAGGT................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................ACAAAGTGCTTACAGTGCAGGTAGTA............................................................................................. 26 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGAGCAGGTA................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACTGCAGTGAAGGCCCTTGTAGC......................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................AAAGTGCTTACAGTGCAGGTAGCGCCA.......................................................................................... 27 3 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTCA............................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAGAGTGCTTACAGTGCAGGTAGA.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................CAACGTGCTTACAGTGCAGGTAG............................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAATGCAGGTA................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACTGCAGTGCAGGCACTTGTGGCAT....................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..........................................................ACAAAGTGCTTACAGTGCAGGTAGT.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCCGGTAGT.............................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGTTAT........................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
................................................................................................TACTGCAGTGAAGGCACTTGCAGA......................................................... 24 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCTGGT................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................AGTGAAGGCACTTGTAGCA........................................................ 19 0 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGTAA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAAAA............................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTGG............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAGGTGCTTACAGTGCAGGTA................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................CAAAGTGCTTACAGTGCAGGTAGAACT........................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
...........................................................TAAAGTGCTTACAGTGCAGGTAGA.............................................................................................. 24 2 3 1.00 3 0 3 0 0 0 0

Anti-sense strand reads

TCGTCCTTATTTCTCTGGTAGTGGAACATTTGGACTTCTGACTGGTCAGTCTTATTACAGTTTCACGAATGTCACGTCCATCACTATTACACGTAGATGACGTCACTTCCGTGAACATCGTAATACCACTGTCGACGGAGCCCTTCGGTTCCACCCGAACTTTCGCGTCCCAGACGA

*******************************************..((((..(((((((..((((((((.((.(((((.(((((........)).)))))))).)).))))))))...)))))))..))))...********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:23 AM