ID:ssc-mir-142 |
Coordinate:chr12:36203916-36203995 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -43.5 | -43.2 | -43.1 |
 |
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|
GGAGGAGGAGCGGGCGGCCTGAAGAGACCCCGCAGACGGACAGACAGACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTAGTGTTTCCTACTTTATGGATGAGTGTACTGTGGGCTTCGGAGACCGCGCCGCCGCCGCCCGCCACCGAAGTCCTCCGCG
**********************************************.((((((((.(((.(((((((((((.(((((((.......(((((....)))))))))))).))))))))))).))).))))))))..********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR139075 testes |
SRR1274763 ovary |
SRR066810 testes |
SRR1274764 testes |
SRR139076 testes |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................TGTAGTGTTTCCTACTTTATGG............................................................. | 22 | 0 | 1 | 1295.00 | 1295 | 1161 | 2 | 6 | 123 | 1 | 2 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGA............................................................ | 23 | 0 | 1 | 1146.00 | 1146 | 1034 | 2 | 18 | 79 | 13 | 0 |
| .............................................................CATAAAGTAGAAAGCACTACT.................................................................................................. | 21 | 0 | 1 | 519.00 | 519 | 186 | 91 | 119 | 27 | 84 | 12 |
| ...........................................................CCCATAAAGTAGAAAGCACT..................................................................................................... | 20 | 0 | 1 | 441.00 | 441 | 40 | 131 | 172 | 9 | 77 | 12 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGA............................................................ | 22 | 0 | 1 | 382.00 | 382 | 303 | 30 | 1 | 43 | 2 | 3 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGG............................................................. | 21 | 0 | 1 | 278.00 | 278 | 217 | 21 | 0 | 38 | 1 | 1 |
| ...........................................................CCCATAAAGTAGAAAGCACTA.................................................................................................... | 21 | 0 | 1 | 156.00 | 156 | 4 | 96 | 18 | 0 | 23 | 15 |
| ...........................................................CCCATAAAGTAGAAAGCACTAC................................................................................................... | 22 | 0 | 1 | 149.00 | 149 | 29 | 20 | 67 | 4 | 22 | 7 |
| .............................................................CATAAAGTAGAAAGCACTA.................................................................................................... | 19 | 0 | 1 | 87.00 | 87 | 2 | 77 | 3 | 1 | 1 | 3 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGAT........................................................... | 23 | 0 | 1 | 81.00 | 81 | 72 | 0 | 1 | 8 | 0 | 0 |
| .................................................................................................CGTAGTGTTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 70.00 | 70 | 64 | 0 | 0 | 6 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGAA........................................................... | 24 | 1 | 1 | 60.00 | 60 | 51 | 0 | 0 | 9 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTACTAA................................................................................................ | 22 | 0 | 1 | 58.00 | 58 | 2 | 48 | 0 | 0 | 0 | 8 |
| .............................................................CATAAAGTAGAAAGCACTACTA................................................................................................. | 22 | 0 | 1 | 56.00 | 56 | 6 | 42 | 4 | 1 | 1 | 2 |
| .............................................................CATAAAGTAGAAAGCACTAC................................................................................................... | 20 | 0 | 1 | 53.00 | 53 | 11 | 24 | 9 | 3 | 5 | 1 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGT............................................................ | 23 | 1 | 1 | 40.00 | 40 | 30 | 0 | 3 | 3 | 4 | 0 |
| ................................................................................................CTGTAGTGTTTCCTACTTTATGGA............................................................ | 24 | 1 | 1 | 38.00 | 38 | 34 | 0 | 0 | 4 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTAT................................................................................................... | 22 | 1 | 1 | 36.00 | 36 | 2 | 19 | 5 | 0 | 3 | 7 |
| ...........................................................CCCATAAAGTAGAAAGCAC...................................................................................................... | 19 | 0 | 1 | 35.00 | 35 | 1 | 23 | 4 | 0 | 5 | 2 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGAA........................................................... | 23 | 1 | 1 | 34.00 | 34 | 24 | 4 | 0 | 6 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGATG.......................................................... | 22 | 0 | 1 | 33.00 | 33 | 7 | 0 | 20 | 1 | 5 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGA............................................................. | 22 | 1 | 1 | 33.00 | 33 | 31 | 0 | 0 | 2 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACT..................................................................................................... | 18 | 0 | 2 | 23.00 | 46 | 4 | 25 | 8 | 1 | 7 | 1 |
| ..............................................................................................ATTTGTAGTGTTTCCTACTTTATGG............................................................. | 25 | 3 | 3 | 21.33 | 64 | 59 | 0 | 0 | 5 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTACT.................................................................................................. | 20 | 0 | 1 | 21.00 | 21 | 4 | 6 | 3 | 6 | 1 | 1 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGT............................................................ | 22 | 1 | 1 | 17.00 | 17 | 13 | 3 | 0 | 1 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATG.............................................................. | 20 | 0 | 1 | 17.00 | 17 | 8 | 6 | 0 | 2 | 0 | 1 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGAAA.......................................................... | 24 | 2 | 1 | 13.00 | 13 | 10 | 2 | 0 | 1 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATG.............................................................. | 21 | 0 | 1 | 12.00 | 12 | 11 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTACA.................................................................................................. | 23 | 1 | 1 | 12.00 | 12 | 2 | 2 | 4 | 1 | 3 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTAA................................................................................................... | 22 | 1 | 1 | 12.00 | 12 | 1 | 6 | 2 | 1 | 0 | 2 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGAT........................................................... | 24 | 0 | 1 | 11.00 | 11 | 10 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................ATTTGTAGTGTTTCCTACTTTATGGA............................................................ | 26 | 3 | 1 | 11.00 | 11 | 10 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGAAA.......................................................... | 25 | 2 | 1 | 9.00 | 9 | 8 | 0 | 0 | 1 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGATT.......................................................... | 22 | 1 | 1 | 9.00 | 9 | 7 | 1 | 0 | 0 | 1 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGAC........................................................... | 23 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTACTAA................................................................................................ | 23 | 0 | 1 | 8.00 | 8 | 0 | 7 | 1 | 0 | 0 | 0 |
| ...................................................................................................TAGTGTTTCCTACTTTATGGA............................................................ | 21 | 0 | 1 | 8.00 | 8 | 7 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCATTA.................................................................................................... | 21 | 1 | 1 | 6.00 | 6 | 0 | 6 | 0 | 0 | 0 | 0 |
| ............................................................CCATAAAGTAGAAAGCACTA.................................................................................................... | 20 | 0 | 1 | 6.00 | 6 | 0 | 5 | 0 | 0 | 1 | 0 |
| .............................................................CATAAAGTAGAAAGCACTACTAT................................................................................................ | 23 | 1 | 1 | 6.00 | 6 | 0 | 6 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTAC................................................................................................... | 19 | 0 | 1 | 6.00 | 6 | 2 | 4 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCA....................................................................................................... | 18 | 0 | 2 | 5.50 | 11 | 4 | 4 | 1 | 1 | 1 | 0 |
| ...................................................................................................TAGTGTTTCCTACTTTATGG............................................................. | 20 | 0 | 1 | 5.00 | 5 | 3 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................................................ATTGTAGTGTTTCCTACTTTATGG............................................................. | 24 | 2 | 1 | 5.00 | 5 | 4 | 0 | 0 | 1 | 0 | 0 |
| ............................................................CCATAAAGTAGAAAGCACT..................................................................................................... | 19 | 0 | 1 | 5.00 | 5 | 0 | 4 | 0 | 0 | 0 | 1 |
| ...............................................................TAAAGTAGAAAGCACTACTAA................................................................................................ | 21 | 0 | 1 | 4.00 | 4 | 0 | 4 | 0 | 0 | 0 | 0 |
| ................................................................................................CAGTAGTGTTTCCTACTTTATGGA............................................................ | 24 | 2 | 1 | 4.00 | 4 | 3 | 0 | 0 | 1 | 0 | 0 |
| ............................................................CCATAAAGTAGAAAGCACTAT................................................................................................... | 21 | 1 | 1 | 4.00 | 4 | 0 | 4 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTACA.................................................................................................. | 21 | 1 | 1 | 4.00 | 4 | 2 | 0 | 0 | 0 | 2 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTACTA................................................................................................. | 21 | 0 | 1 | 4.00 | 4 | 0 | 3 | 0 | 0 | 0 | 1 |
| .............................................................CATAAAGTAGAAAGCACTAA................................................................................................... | 20 | 1 | 2 | 4.00 | 8 | 0 | 7 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATAAAGTAGAAAGCATT..................................................................................................... | 20 | 1 | 1 | 4.00 | 4 | 0 | 4 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGAT........................................................... | 21 | 0 | 1 | 4.00 | 4 | 2 | 0 | 1 | 0 | 1 | 0 |
| .................................................................................................TGTGGTGTTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGA............................................................ | 20 | 0 | 1 | 3.00 | 3 | 2 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATAAAGTAGAAAGCACTACC.................................................................................................. | 23 | 1 | 1 | 3.00 | 3 | 0 | 0 | 2 | 0 | 1 | 0 |
| ................................................................................................CTGTAGTGTTTCCTACTTTATGG............................................................. | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGTA........................................................... | 24 | 2 | 1 | 3.00 | 3 | 1 | 0 | 1 | 1 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTATT.................................................................................................. | 21 | 1 | 4 | 2.75 | 11 | 1 | 6 | 0 | 0 | 0 | 4 |
| ..................................................................................................GCAGTGTTTCCTACTTTATGGA............................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAAGTAGAAAGCACTAC................................................................................................... | 18 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGATGT......................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 1 |
| .................................................................................................TGTAGTGTTTGCTACTTTATGG............................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................CGTAGTGTTTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGAGTTTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTTCTACTTTATGG............................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 1 |
| .................................................................................................TGTAGTGTTTCCTACTTTGTGG............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTA................................................................ | 18 | 0 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGACT.......................................................... | 24 | 2 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................TAGTGTTTCCTACTTTATGGAT........................................................... | 22 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTACT.................................................................................................. | 23 | 0 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| ...................................................................................................TAGTGTTTCCTACTTTATGGTA........................................................... | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGA............................................................. | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................ATTGTAGTGTTTCCTACTTTATGGA............................................................ | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTAAA.................................................................................................. | 23 | 2 | 2 | 1.50 | 3 | 1 | 0 | 2 | 0 | 0 | 0 |
| ...............................................................................................TTAGTAGTGTTTCCTACTTTATGGA............................................................ | 25 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTA.................................................................................................... | 18 | 0 | 2 | 1.50 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTATT.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGACA.......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTGTGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTCCTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTCTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTCCCTACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TAAAGTAGAAAGCACTACT.................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGAAAA......................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CGTGTAGTGTTTCCTACTTTATGGA............................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTAAGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAGAAA................................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTATA.................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGACAGCACTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGCA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCTTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTACTATT............................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGAG........................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGTA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATAG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................CTATGTAGTGTTTCCTACTTTATGGA............................................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAACGTAGAAAGCACTACT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATAAAGTAGAAAGCACTC.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGCA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .............................................................CATAAAGTAGGAAGCACTACTA................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................CCATAAAGTAGAAAGCACTAC................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTCGACAGCACTA.................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................................................................GTAGTGTTTCCTCCTTTATGG............................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTTCTTTATGG............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTCCAA................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGTA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAG................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTAG................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTG.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .................................................................................................TGTAGTGTTTCCTACTTTACGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCTATAAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGTAAGCACTACTAA................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCCACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTGATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGTT........................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGG............................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTATTTCCTACTTTATGGAA........................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CATGTAGTGTTTCCTACTTTATGGA............................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGATC.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGACA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTACTAT................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACCTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................CTGTAGTGTCTCCTACTTTATGGA............................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGAAGTGTTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTATTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................TGAGTGTACTGTGGGCTTCGG....................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGAAA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................CCCCATAAAGTAGAAAGCACTAC................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................TTATGTAGTGTTTCCTACTTTATGGA............................................................ | 26 | 3 | 2 | 1.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................CCCATAAATTAGAAAGCACTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................ACGGACAGACAGACCGTGCAGTCACC....................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATACAGTAGAAAGCACTACTA................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................ACGGACAGACAGACAGTGCAGTCACC....................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAGGCACTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTAT............................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTCCTTTATGGA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCGACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGGGTTTCCTACTTTATGGA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTCCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................AGTAGTGTTTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGATA.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTAT............................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCATTACTAA................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGGAAGCACTACT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................TGTAGTGTTTTCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................AAGTAGTGTTTCCTACTTTATGG............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCTATAAAGTAGAAAGCACTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................ATGTAGTGTTTCCTACTTTATGGA............................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATCAAGTAGAAAGCACTA.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGT............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGAC........................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TATAGTGTTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAACGCACTACTA................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAATCACTACTAA................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........GCGGGCGGCCTGAAGA........................................................................................................................................................... | 16 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGCGTTTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| GGAGGAGGAGCGGGCGGCCTGAAAA........................................................................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAGAGTAGAAAGCACTA.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGGAGAAAGCACTAC................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACT................................................................... | 16 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTTATGGATA.......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................AGGGTGTAGTGTTTCCTACTTTATGGA............................................................ | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTACGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTCCCTACTTTATGG............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGC............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCCACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACCA.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTTCATGGA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTATTA................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................CCCTAAAGTAGAAAGCACT..................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCGTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCTATAAAGTAGAAAGCACTA.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCTCTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................AGTAGTGTTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAGGCACT..................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCATTACT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGCTTCCTACTTTATGGA............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAGT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTATCCTACTTTATGGAA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTGTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAGAGTAGAAAGCACTACT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACTT.................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................................................TGAAGTGTTTCCTACTTTATGG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGG............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCACAAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................TGAGTGCACTGTGGGCTTCGG....................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTTATGGGA........................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCAA...................................................................................................... | 19 | 1 | 4 | 0.75 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAAGCACA..................................................................................................... | 20 | 1 | 3 | 0.67 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| ...........................................................CTCATAAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 3 | 0.67 | 2 | 0 | 1 | 0 | 0 | 0 | 1 |
| ...........................................................TCCATAAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 3 | 0.67 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATATAGTAGAAAGCACTAT................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATAAAGTAGAAAGAACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTTCT.................................................................................................. | 21 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATGAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAACGTAGAAAGCACTAT................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CCCATAATGTAGAAAGCACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CGCATAAAGTAGAAAGCACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGAAGAAAGCACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................TTATGTAGTGTTTCCTACTTTATGG............................................................. | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAGAGCACT..................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAAAA................................................................................................. | 22 | 2 | 5 | 0.40 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCA....................................................................................................... | 16 | 0 | 14 | 0.36 | 5 | 2 | 0 | 0 | 3 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACCACT.................................................................................................. | 20 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCAC...................................................................................................... | 17 | 0 | 6 | 0.33 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................AGTGTTTCCTACTTTATGGACT.......................................................... | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................GTTTCCTACTTTATGG............................................................. | 16 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTATAAAGCACTACT.................................................................................................. | 20 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................CCATAAAGTAGAAAGCAC...................................................................................................... | 18 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................CTCATAAAGTAGAAAGCAC...................................................................................................... | 19 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTACTTAA................................................................ | 19 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................TCCCATAAAGTAGAAAGCAC...................................................................................................... | 20 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACT..................................................................................................... | 17 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTTTTACTTTATGG............................................................. | 22 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................GTAGTGTTTCCTACTT.................................................................. | 16 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................TATAAAGTAGAAAGCATTACTA................................................................................................. | 22 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................................................................GTAGTGTTTCCTACCTTATGA............................................................. | 21 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................TGTAGTGTTTCCTAC.................................................................... | 15 | 0 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................CATAAAGTAGACAGCACTAG................................................................................................... | 20 | 2 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTATAAAGCACTACA.................................................................................................. | 21 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..............................................................ATAAAGTAAAAAACACTACTAA................................................................................................ | 22 | 2 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAAA.................................................................................................. | 21 | 2 | 20 | 0.10 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCATT..................................................................................................... | 18 | 1 | 20 | 0.10 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTAA................................................................................................... | 19 | 1 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGCACTAAG.................................................................................................. | 21 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .............................................................CCAAAAGTAGAAAGCACTAC................................................................................................... | 20 | 2 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................CCCATAAAGTAGAAA.......................................................................................................... | 15 | 0 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CATAAAGTAGAAAGC........................................................................................................ | 15 | 0 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................ATAAAGTAGAAAGCACTAAAA................................................................................................. | 21 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
|
CCTCCTCCTCGCCCGCCGGACTTCTCTGGGGCGTCTGCCTGTCTGTCTGTCACGTCAGTGGGTATTTCATCTTTCGTGATGATTGTCGTGACCTCCCACATCACAAAGGATGAAATACCTACTCACATGACACCCGAAGCCTCTGGCGCGGCGGCGGCGGGCGGTGGCTTCAGGAGGCGC
**********************************************.((((((((.(((.(((((((((((.(((((((.......(((((....)))))))))))).))))))))))).))).))))))))..********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066809 ovary |
SRR139075 testes |
|---|---|---|---|---|---|---|---|
| ...........................................................AGGTATTTCATCCTTTGTGATGATT................................................................................................ | 25 | 3 | 2 | 1.50 | 3 | 3 | 0 |
| .............................................................GTATTTCATCCTTTGTGATGATT................................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................................................................................CCTCAGGCGCGGCGGCGGA...................... | 19 | 2 | 20 | 0.05 | 1 | 0 | 1 |
| .........................................................................................................................................................GCGGCGGGCTGTTGCT........... | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 |
Generated: 09/01/2015 at 11:24 AM