ID:

ssc-mir-139

Coordinate:

chr9:7935635-7935702 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.1 -46.1 -46.1

Sense Strand Reads

ATCGGGCAGCTGGTGGGGGGGTGGTCGGGGGTGCCCAGGAGCGGGCTCAGGTGTATTCTACAGTGCACGTGTCTCCAGTGTGGCTCGGAGGCTGGAGACGCGGCCCTGTTGGAGTAACAACTGATGCCAGAGTCTGCGtGGGGgtGGGtGgGGttGtGGGGgtgGgtG

*****************************************..(((((((.((((((((((((.((.((((((((((((...........)))))))))))))).))).)))))).))).)))).)))..**************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
SRR139075

testes
SRR139076

testes
SRR1274763

ovary
SRR1274764

testes
........................................................TCTACAGTGCACGTGTCTCCAGT......................................................................................... 23 0 1 6375.00 6375 3168 2802 296 24 63 22
............................................................................................TGGAGACGCGGCCCTGTTGGAGT..................................................... 23 0 1 1047.00 1047 320 253 432 36 2 4
........................................................TCTACAGTGCACGTGTCTCCAG.......................................................................................... 22 0 1 982.00 982 462 363 121 17 13 6
........................................................TCTACAGTGCACGTGTCTCCA........................................................................................... 21 0 1 911.00 911 444 321 120 14 8 4
........................................................TCTACAGTGCACGTGTCTCC............................................................................................ 20 0 1 274.00 274 116 129 21 2 2 4
............................................................................................TGGAGACGCGGCCCTGTTGGAG...................................................... 22 0 1 236.00 236 14 27 170 24 1 0
........................................................TCTACAGTGCACGTGTCTCCAGA......................................................................................... 23 1 1 198.00 198 95 72 21 3 5 2
............................................................................................TGGAGACGCGGCCCTGTTGGA....................................................... 21 0 1 175.00 175 57 55 55 8 0 0
........................................................TCTACAGTGCACGTGTCTCCAT.......................................................................................... 22 1 1 135.00 135 62 47 22 3 1 0
........................................................TCTACAGTGCACGTGTCTCCAGTT........................................................................................ 24 1 1 135.00 135 60 65 7 2 1 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGA..................................................... 23 1 1 98.00 98 11 19 62 6 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAA...................................................... 22 1 1 76.00 76 24 12 40 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAGT..................................................... 22 0 1 74.00 74 17 10 46 1 0 0
........................................................TCTACAGTGCACGTGTCTC............................................................................................. 19 0 1 50.00 50 18 15 14 2 1 0
.........................................................CTACAGTGCACGTGTCTCCAGT......................................................................................... 22 0 1 41.00 41 17 20 3 1 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTA........................................................................................ 24 1 1 39.00 39 21 12 4 1 1 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTT.................................................... 24 1 1 35.00 35 16 9 9 0 1 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTT................................................... 22 2 1 35.00 35 2 6 25 2 0 0
........................................................TCTACAGTGCACGTGTCTCCATT......................................................................................... 23 1 1 32.00 32 20 8 2 0 1 1
........................................................TCTACAGTGCACGTGTCT.............................................................................................. 18 0 1 30.00 30 15 13 1 0 0 1
............................................................................................TGGAGACGCGGCCCTGTTGGAAA..................................................... 23 2 1 27.00 27 1 4 19 3 0 0
........................................................TCTACAGTGCACGTGTCTCCAA.......................................................................................... 22 1 1 26.00 26 4 3 14 4 1 0
........................................................TCTACAGTGCACGTGTC............................................................................................... 17 0 1 23.00 23 3 0 20 0 0 0
..........................................................TACAGTGCACGTGTCTCCAGT......................................................................................... 21 0 1 17.00 17 9 4 4 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGC......................................................................................... 23 1 1 16.00 16 5 10 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAT...................................................... 22 1 1 16.00 16 6 4 5 1 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAG...................................................... 21 0 1 16.00 16 2 0 14 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTT.................................................... 21 1 1 15.00 15 3 6 6 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGG..................................................... 23 1 1 12.00 12 6 3 2 1 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAAT..................................................... 23 1 1 12.00 12 3 3 5 1 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTA.................................................... 24 0 1 11.00 11 2 3 6 0 0 0
.......................................................CTCTACAGTGCACGTGTCTCCAGT......................................................................................... 24 1 1 10.00 10 3 5 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGG........................................................ 20 0 1 10.00 10 1 0 9 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAAT......................................................................................... 23 1 1 10.00 10 2 6 2 0 0 0
........................................................TCTACAGTGCACGCGTCTCCAGT......................................................................................... 23 1 1 10.00 10 4 6 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTG......................................................... 19 0 1 9.00 9 0 0 9 0 0 0
........................................................TCTACAGTGCACGTGTTTCCAGT......................................................................................... 23 1 1 8.00 8 2 4 2 0 0 0
........................................................TCTACAGTGCATGTGTCTCCAGT......................................................................................... 23 1 1 8.00 8 4 4 0 0 0 0
.........................................................CTACAGTGCACGTGTCTCCA........................................................................................... 20 0 1 7.00 7 2 4 1 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTA.................................................... 21 0 1 7.00 7 3 0 3 1 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGA....................................................... 20 0 1 7.00 7 2 1 4 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTAT................................................... 22 1 1 7.00 7 0 1 6 0 0 0
........................................................TCTACAGTGCACGTGTCTCT............................................................................................ 20 1 1 7.00 7 4 3 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGC..................................................... 23 1 1 6.00 6 3 3 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCCGT......................................................................................... 23 1 1 6.00 6 1 2 3 0 0 0
........................................................TCTACAGTGTACGTGTCTCCAGT......................................................................................... 23 1 1 5.00 5 1 2 2 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGT..................................................... 20 0 1 5.00 5 1 3 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGT....................................................... 21 1 1 5.00 5 1 2 2 0 0 0
.........................................................CTACAGTGCACGTGTCTCCAG.......................................................................................... 21 0 1 5.00 5 4 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTTT....................................................................................... 25 1 1 5.00 5 2 2 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCTAGT......................................................................................... 23 1 1 5.00 5 2 2 1 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAGTT.................................................... 23 1 1 4.00 4 1 2 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCT........................................................................................... 21 1 1 4.00 4 0 3 0 0 1 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGAA.................................................... 24 1 1 4.00 4 1 1 2 0 0 0
........................................................CCTACAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 4.00 4 2 1 1 0 0 0
........................................................TCTACAGTACACGTGTCTCCAGT......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
........................................................TCTATAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 4.00 4 1 2 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCGGT......................................................................................... 23 1 1 4.00 4 1 3 0 0 0 0
.........................................................CTACAGTGCACGTGTCTCC............................................................................................ 19 0 1 4.00 4 1 2 1 0 0 0
........................................................TCTACAGTGCACGTATCTCCAGT......................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTAA................................................... 22 0 1 3.00 3 0 0 2 1 0 0
........................................................TCTACAGTGCGCGTGTCTCCAGT......................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAGA....................................................................................... 25 2 1 3.00 3 2 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAAA....................................................................................... 25 3 1 3.00 3 1 0 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGGTGGAG...................................................... 22 1 1 3.00 3 0 1 2 0 0 0
........................................................TCTACAGAGCACGTGTCTCCAGT......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTC................................................... 22 2 1 3.00 3 1 0 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTTT................................................... 25 2 1 3.00 3 0 0 3 0 0 0
..............................................................................................GAGACGCGGCCCTGTTGGAGT..................................................... 21 0 1 3.00 3 2 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCATA......................................................................................... 23 2 1 3.00 3 2 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAAA......................................................................................... 23 2 1 3.00 3 0 2 1 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAA...................................................... 21 1 1 3.00 3 0 1 2 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAGA..................................................... 22 1 1 3.00 3 0 1 2 0 0 0
........................................................TCTACAGTGCACGCGTCTCCA........................................................................................... 21 1 1 3.00 3 1 0 1 0 1 0
........................................................TCTACAGTCCACGTGTCTCCAGT......................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
........................................................TCTACAGTGCACGTGTCCCCAGT......................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCA............................................................................................ 20 1 1 3.00 3 0 2 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTAA....................................................................................... 25 2 1 3.00 3 0 1 1 0 1 0
............................................................................................TGGAGACGCGGCCCTGTTGA........................................................ 20 1 1 3.00 3 2 0 0 1 0 0
........................................................TCTACAATGCACGTGTCTCCAGT......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
........................................................TCTACAGTGCACATGTCTCCAGT......................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAC.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTTGAGT..................................................... 23 1 1 2.00 2 0 1 1 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTAA.................................................. 23 2 1 2.00 2 0 0 2 0 0 0
............................................................................................CGGAGACGCGGCCCTGTTGGAGT..................................................... 23 1 1 2.00 2 0 1 1 0 0 0
........................................................TTTACAGTGCACGTGTCTCCAG.......................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAA........................................................................................ 24 2 1 2.00 2 1 0 1 0 0 0
..........................................................TACAGTGCACGTGTCTCCA........................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
........................................................TCTGCAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
........................................................TCTACCGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 2.00 2 0 0 1 1 0 0
.......................................................CTCTACAGTGCACGTGTCTCCAT.......................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGTCTTCA........................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTGA....................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
........................................................TCCACAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
........................................................TCTACATTGCACGTGTCTCCAG.......................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGATT..................................................... 23 1 1 2.00 2 1 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTAAA.................................................. 26 1 1 2.00 2 1 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCATTT........................................................................................ 24 2 1 2.00 2 0 2 0 0 0 0
...........................................................................................CTGGAGACGCGGCCCTGTTGGAGT..................................................... 24 0 1 2.00 2 0 1 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTAT....................................................................................... 25 1 1 2.00 2 1 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAAC......................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
............................................................................................TGGCGACGCGGCCCTGTTGGAGT..................................................... 23 1 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTG........................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTTT.................................................. 23 3 1 2.00 2 0 0 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGCTGGAGT..................................................... 23 1 1 2.00 2 1 0 1 0 0 0
........................................................TCTACAGTGCACGAGTCTCCAG.......................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.........................................................TTACAGTGCACGTGTCTCCA........................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TGGAGACGCGGCTCTGTTGGAGA..................................................... 23 2 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGG......................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
.....................................................ATTTCTACAGTGCACGTGTCTCCAGT......................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0
..........................................................TACAGTGCACGTGTC............................................................................................... 15 0 1 2.00 2 0 0 2 0 0 0
............................................................................................TGGAGACGCGGCCCTGCTGGAG...................................................... 22 1 1 2.00 2 0 1 1 0 0 0
........................................................TCTAAAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAC...................................................... 22 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TGGAGACGCGGTCCTGTTGGA....................................................... 21 1 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGTCTCCACT......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................TACATTGCACGTGTCTCCA........................................................................................... 19 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TGGAGACGCGGCTCTGTTGGAGT..................................................... 23 1 1 2.00 2 0 0 2 0 0 0
........................................................TCTACAGTGCACGTGCCTCCAGT......................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
....................................AGGAGCGGGCTCAGGTGTAT................................................................................................................ 20 0 1 2.00 2 0 0 2 0 0 0
............................................................................................TGGGGACGCGGCCCTGTTGGAGT..................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACGCGGCCCTGTTGGAGT..................................................... 18 0 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................GAGACGCGGCCCTGTTGGAG...................................................... 20 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGC..................................................... 20 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCA.............................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAGTTGCC................................................. 26 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAAACGCGGCCCTGTTGGAGT..................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCCCCA........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAGAC...................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGTCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTTTCCAGA......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCGG.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTTCCCAGT......................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTGT................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTG.................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACATGTCTCC............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTTGAG...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTTTCC............................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTA................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTACACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGTGT..................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.........................................................ATACAGTGCACGTGTCTCCAGT......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.........................................................CTACAGTGCACGTGTCTCCAGA......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTCGGAGT..................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAAA..................................................... 22 2 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAATT........................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGCGACGCGGCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTGTGGCTCGGAGGCTGGAGACGCGGCCCTGTTGGAGT..................................................... 59 0 1 1.00 1 0 0 0 0 1 0
..........................................................TACAGTGCACGTGTCTCCCGT......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................ACTACAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTTTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAAC..................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTTTCCA........................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TAGACGCGGCCCTGTTGGAA...................................................... 20 2 1 1.00 1 0 1 0 0 0 0
........................................................TTTACAGTGCACGTGTCTCC............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
......................................................ATTCTACAGTGCACGTGTCTCCAGT......................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................ATCTACAGTGCACGTGTCTCCAGT......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCAAGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTT......................................................... 19 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTTTCCAG.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGGTAG...................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0
..........................................................TACAGTGCACGTGTCTCCAG.......................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0
............................................................................................TGGAGACGCGGCCCTTTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGGGACGCGGCCCTGTTG......................................................... 19 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTTCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGAGACGCGGCCCCGTTGGAGT..................................................... 23 1 1 1.00 1 0 0 0 1 0 0
........................................................TCTACAGTGCACGTGTCTCCAGCA........................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTGTGGCT................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGATT..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGGGACGCGGCCCTGTTGGA....................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGGGTCTCCAG.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGGG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................CCTACAGTGCACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
........................................................TCTACAGTGCACGTGTCTGTAG.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCTTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 0 1 0 0
........................................................TCTACAGTGCACGGGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACCGTGCACGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCCACAGTGCACGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGGGCACGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................TGAGACGCGGCCCTGTTGGAGT..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGTCCTGTTGGAGT..................................................... 23 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGGGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACCGTGCACGTGTCTCCAGA......................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTG............................................................ 16 0 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAATGCACGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACTTGTCTCCAGTT........................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGCTGGA....................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTATAGTGCACGTGTCTCC............................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGGTGGAGT..................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTGTAG..................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACATTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGAACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTTTCTCCAGTT........................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................GGCGACGCGGCCCTGTTGGAG...................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAG........................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGTAT..................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGCCTCCA........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTAC............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................ACAGTGCACGTGTCTCCAGT......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................ATTTCTACAGTGCAAGTGTCTCCAG.......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
.......................................................TTCTACAGTGCACGTGTCTCCA........................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGAGACGTGGCCCTGTTGGAGT..................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACGGGGCACGTGTCTCCAG.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
......................................................CATCTACAGTGCACGTGTCTCCAGT......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................GGAGACGCGGCCCTGTTGGAGTA.................................................... 23 0 1 1.00 1 0 0 0 1 0 0
........................................................TTTACAGTGCACGTGTCTCCAGA......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTTG....................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................GGAGACGCGGCCCTTTTGGAGT..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TAGAGACGCGGCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACTGTGCACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................ACAGTGCACGTGTCTCCA........................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAAG..................................................... 23 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TGGAGACGCGTCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAAAT.................................................... 24 3 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTTCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTC........................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................GGAGACGCGGGCCTGTTGGAGT..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGCCGCGGCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGTACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCCCGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....GCACCTGGTCGGTGGGTGGTCGGG........................................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCGGTA........................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGCGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................ACTACAGTGCACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................ATTTGGAGACGCGGCCCTGTTGGAGT..................................................... 26 3 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTTCC...................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGGGACGCGGCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGCCCCTGTTGGAGT..................................................... 23 1 1 1.00 1 0 0 0 1 0 0
........................................................TCTACAGTGCACGTGTCTCCAGAT........................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTTCAGC......................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGGGCACGTGTCTCC............................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCATGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTCT.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGT........................................................ 20 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACACGGCCCTGTTGGA....................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGTCCCTGTTGGAGT..................................................... 23 1 1 1.00 1 0 0 0 1 0 0
........................................................TCTACAGTGCACGCGTCTCCAG.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACTTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGTGCACGTGTCTTCAG.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................TCAGTGCACGTGTCTCCAGT......................................................................................... 20 1 2 1.00 2 1 1 0 0 0 0
........................................................TCTACAGTGCACGTGACTCCA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCAGTTA....................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..........................................................TACAGTGCACGTGTCTCC............................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0
........................................................TCTGCAGTGCACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
...................................................................................................GCGGCCCTGTTGGAGT..................................................... 16 0 1 1.00 1 0 1 0 0 0 0
.............................................................AGTGCACGTGTCTCCAGT......................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
............................................................................................TGGAGACGCGCCCCTGTTGGAG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGTGGCCCTGTTGG........................................................ 20 1 1 1.00 1 0 0 1 0 0 0
........................................................TTTACAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
........................................................TCTACGGTGCACGTGTCTCCA........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................ATTTCTACAGTGCACGTGTCTCCAG.......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTTGA....................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................CTCTACAGTGCACGTGTCTCCA........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGCGCACGTGTCTC............................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
........................................................TCTACAGCGCACGTGTCTCCAA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGAAA................................................... 25 1 1 1.00 1 0 0 0 1 0 0
...............................................................................................AGACGCGGCCCTGTTGGAGTTAAT................................................. 24 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGTTGGAGTTTT.................................................. 26 3 1 1.00 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCCCC............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................GAGACGCGGCCCTGTTGGAGTTC................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................TCTACGGTGCACGTGTCTCC............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACTGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTTC............................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
........................................................CCTACAGTGCACGTGTCTCCAG.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................TTCACAGTGCACGTGTCTCCAGT......................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.......................................................CTCTACAGTGCACGTGTCT.............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
........................................................TCTACAGTGTACGTGTCTC............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
........................................................TCAACAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................ACGCGGCCCTGTTGGAGTA.................................................... 19 0 1 1.00 1 1 0 0 0 0 0
........................................................TCTAGAGTGCACGTGTCTCCAGT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................................AGTGTGGCTCAGAGGCTGG......................................................................... 19 1 7 0.57 4 2 2 0 0 0 0
............................................................................................TGTAGACGCGGCTCTGTTGGAG...................................................... 22 2 2 0.50 1 0 0 1 0 0 0
............................................................................................TGGAGACGCGGCCCTGCTGGAGA..................................................... 23 2 2 0.50 1 0 0 1 0 0 0
..........................................................TACAGTGCACGTGTCTCCTTT......................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0
................................................................GCACGTGTCTCCAGT......................................................................................... 15 0 2 0.50 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGTCTCCATG......................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0
........................................................TCTACAGTGCACGTGTCTCAG........................................................................................... 21 2 2 0.50 1 0 0 1 0 0 0
........................................................TCTACAGTGCAAGTGTCTCCAA.......................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0
........................................................TCCACAGTGCACGTGTCTCCAT.......................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...............................................................TGCACGTGTCTCCAGT......................................................................................... 16 0 2 0.50 1 1 0 0 0 0 0
........................................................TCTACAGTGCACGTGCCTCCAGA......................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0
.........................................................CTACAGTGCACGTGTCTCCAT.......................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
..........................................................TACAGTGCACGTGTCTCCAAG......................................................................................... 21 2 2 0.50 1 0 0 0 0 1 0
............................................................................................TGGAGCCGCGGCCCTGTTGGAGTTT................................................... 25 3 3 0.33 1 0 0 1 0 0 0
........................................................AATGCAGTGCACGTGTCTCCAGT......................................................................................... 23 3 3 0.33 1 0 1 0 0 0 0
.......................................................ATCTACAGTGCACGTGT................................................................................................ 17 1 10 0.20 2 0 0 2 0 0 0
..................................................................................................CGCGGCCCTGTTGGAT...................................................... 16 1 9 0.11 1 0 1 0 0 0 0

Anti-sense strand reads

TAGCCCGTCGACCACCCCCCCACCAGCCCCCACGGGTCCTCGCCCGAGTCCACATAAGATGTCACGTGCACAGAGGTCACACCGAGCCTCCGACCTCTGCGCCGGGACAACCTCATTGTTGACTACGGTCTCAGACGCtCCCCgtCCCtCgCCttCtCCCCgtgCgtC

**************************************..(((((((.((((((((((((.((.((((((((((((...........)))))))))))))).))).)))))).))).)))).)))..*****************************************
Read size # Mismatch Hit Count Total Norm Total SRR066810

testes
SRR066809

ovary
........................................................AGATGTCACGTGCACAGAGGTCA......................................................................................... 23 0 1 5.00 5 3 2
........................................................AGATGTCACGTGCACAGAGGTC.......................................................................................... 22 0 1 3.00 3 2 1
........................................................TGATGTCACGTGCACAGAGGTC.......................................................................................... 22 1 1 1.00 1 1 0
......................................................TAAGATGTCACGTGCACAGAGGT........................................................................................... 23 0 1 1.00 1 1 0
.....................................................................ACAGAGGTCACACCGAGTCTCCGA........................................................................... 24 1 1 1.00 1 0 1
..............................................CGTCCACATAAGATGTCACGTGCA.................................................................................................. 24 1 1 1.00 1 1 0
.........................................................................................................................ACTACGGTGTCAGAAGCTCGC.......................... 21 3 15 0.07 1 0 1

Generated: 09/01/2015 at 11:41 AM