ID:

ssc-mir-132

 Coordinate:

chr12:50015722-50015799 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.4 -42.9

Sense Strand Reads

CTAGAGCTGCCGCCCTGGTGCCGTCAGCAGCGCGCGCCCCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGCGCCGCGCCGCGCAGCACGCCGCCAGCCCGGGATGGGGGAGA

********************************************..((((((...((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).))))...)).))))..********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR139075

testes		 SRR1274763

ovary		 SRR139076

testes		 SRR1274764

testes
................................................................................................TAACAGTCTACAGCCATGGTCG............................................................ 22 0 1 6307.00 6307 5411 672 84 109 18 13
................................................................................................TAACAGTCTACAGCCATGGTCGT........................................................... 23 1 1 1672.00 1672 1367 97 101 73 19 15
.................................................................................................AACAGTCTACAGCCATGGTCG............................................................ 21 0 1 420.00 420 376 30 6 7 1 0
................................................................................................TAACAGTCTACAGCCATGGTCGA........................................................... 23 1 1 359.00 359 332 9 7 7 4 0
................................................................................................TAACAGTCTACAGCCATGGTC............................................................. 21 0 1 305.00 305 248 30 7 12 0 8
................................................................................................TAACAGTCTACAGCCATGGTCA............................................................ 22 1 1 173.00 173 148 18 3 1 3 0
...........................................................AACCGTGGCTTTCGATTGTTA.................................................................................................. 21 0 1 132.00 132 51 8 25 2 43 3
............................................................ACCGTGGCTTTCGATTGTTACT................................................................................................ 22 0 1 130.00 130 72 16 17 7 10 8
.................................................................................................AACAGTCTACAGCCATGGTCGT........................................................... 22 1 1 130.00 130 110 7 7 4 2 0
..................................................................................................ACAGTCTACAGCCATGGTCGT........................................................... 21 1 1 111.00 111 78 18 7 5 3 0
................................................................................................TAACAGTCTACAGCCATGGTCT............................................................ 22 1 1 82.00 82 47 28 1 2 2 2
................................................................................................TAACAGTCTACAGCCATGG............................................................... 19 0 1 64.00 64 49 4 9 1 1 0
................................................................................................TAACAGTCTACAGCCATGGT.............................................................. 20 0 1 61.00 61 33 5 11 2 10 0
...........................................................AACCGTGGCTTTCGATTGTT................................................................................................... 20 0 1 51.00 51 22 1 22 1 5 0
................................................................................................TAACAGTCTACAGCCATGGTCGTT.......................................................... 24 2 1 32.00 32 27 1 3 1 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTA.......................................................... 24 2 1 22.00 22 19 3 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTT.......................................................... 22 2 1 22.00 22 17 3 2 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGA........................................................... 22 1 1 20.00 20 17 0 0 0 2 1
................................................................................................TAACAGTCTACAGCCATGGGCG............................................................ 22 1 1 20.00 20 15 3 2 0 0 0
............................................................ACCGTGGCTTTCGATTGTTAC................................................................................................. 21 0 1 20.00 20 14 2 2 0 0 2
...........................................................AACCGTGGCTTTCGATTGTTAA................................................................................................. 22 1 1 17.00 17 11 1 2 0 3 0
..................................................................................................ACAGTCTACAGCCATGGTCG............................................................ 20 0 1 13.00 13 12 1 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTC............................................................. 20 0 1 13.00 13 10 2 0 1 0 0
...............................................................................................CTAACAGTCTACAGCCATGGTCG............................................................ 23 1 1 13.00 13 12 1 0 0 0 0
.............................................................................................ATTTAACAGTCTACAGCCATGGTCG............................................................ 25 2 1 10.00 10 10 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTA............................................................. 21 1 1 10.00 10 9 1 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTAC................................................................................................. 22 0 1 10.00 10 8 1 0 0 0 1
...........................................................AACCGTGGCTTTCGATTGT.................................................................................................... 19 0 1 9.00 9 6 0 2 1 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGC........................................................... 23 0 1 9.00 9 8 0 0 1 0 0
............................................................ACCGTGGCTTTCGATTGTTA.................................................................................................. 20 0 1 8.00 8 2 3 2 0 1 0
.................................................................................................AACAGTCTACAGCCATGGTCA............................................................ 21 1 1 7.00 7 6 1 0 0 0 0
................................................................................................TAACAGTCTATAGCCATGGTCG............................................................ 22 1 1 7.00 7 7 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTAT............................................................ 22 2 1 7.00 7 4 0 3 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCTT........................................................... 23 2 1 7.00 7 5 0 2 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCT............................................................ 21 1 1 6.00 6 5 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGGCGT........................................................... 23 2 1 6.00 6 5 0 1 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGC........................................................... 21 0 1 6.00 6 5 0 1 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGTT.......................................................... 23 2 1 6.00 6 6 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTAT......................................................... 25 3 1 6.00 6 5 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTTT......................................................... 25 3 1 6.00 6 6 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTTG............................................................ 22 1 1 6.00 6 5 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCTA........................................................... 23 2 1 6.00 6 1 2 0 0 3 0
................................................................................................TAACAGTCTACAGCCATGGTAA............................................................ 22 2 1 6.00 6 4 0 1 0 1 0
................................................................................................TAACAGTCTGCAGCCATGGTCG............................................................ 22 1 1 5.00 5 5 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATAGTCG............................................................ 22 1 1 5.00 5 4 1 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTACT................................................................................................ 23 0 1 5.00 5 2 0 1 1 0 1
................................................................................................CAACAGTCTACAGCCATGGTCG............................................................ 22 1 1 5.00 5 4 1 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGG............................................................... 18 0 1 5.00 5 4 0 1 0 0 0
................................................................................................TAACAGTCTACAGCCATGGCCG............................................................ 22 1 1 5.00 5 5 0 0 0 0 0
................................................................................................TAACAGCCTACAGCCATGGTCG............................................................ 22 1 1 5.00 5 4 0 0 1 0 0
................................................................................................TAACAGTCTACAGCTATGGTCG............................................................ 22 1 1 5.00 5 5 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTTT......................................................... 23 3 2 4.50 9 9 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGA.............................................................. 20 1 1 4.00 4 4 0 0 0 0 0
................................................................................................TGACAGTCTACAGCCATGGTCG............................................................ 22 1 1 4.00 4 3 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCC............................................................ 22 1 1 4.00 4 0 3 0 0 1 0
................................................................................................TAATAGTCTACAGCCATGGTCG............................................................ 22 1 1 4.00 4 3 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCTTGGTCG............................................................ 22 1 1 4.00 4 4 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCACGGTCG............................................................ 22 1 1 4.00 4 4 0 0 0 0 0
................................................................................................TATCAGTCTACAGCCATGGTCG............................................................ 22 1 1 4.00 4 4 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAA.......................................................... 24 2 1 4.00 4 2 0 2 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGC........................................................... 22 0 1 3.00 3 3 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTT................................................................................................... 19 0 1 3.00 3 0 0 0 2 1 0
.............................................................CCGTGGCTTTCGATTGTTACT................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTAA......................................................... 25 3 1 3.00 3 2 0 0 0 1 0
................................................................................................TAACAGTCTACAGCCATGGTT............................................................. 21 1 1 3.00 3 2 0 0 0 1 0
.................................................................................................AACAGTCTACAGCCATGGTCGTAT......................................................... 24 3 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTTT............................................................ 22 2 1 3.00 3 2 0 0 0 0 1
................................................................................................TAACGGTCTACAGCCATGGTCG............................................................ 22 1 1 3.00 3 2 1 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTAA................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCTACAGTCATGGTCG............................................................ 22 1 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTG.......................................................... 24 2 1 3.00 3 3 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGTA.......................................................... 23 2 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCCACAGCCATGGTCG............................................................ 22 1 1 3.00 3 3 0 0 0 0 0
................................................................................................TAACAGTCTTCAGCCATGGTCG............................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTA.......................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGA........................................................... 21 1 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCACGGTCGT........................................................... 23 2 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACTGTCTACAGCCATGGTCG............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCCTGGTCGT........................................................... 23 2 1 2.00 2 0 0 2 0 0 0
................................................................................................TAACAGTCAACAGCCATGGTCG............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................TTATAACAGTCTACAGCCATGGTCG............................................................ 25 3 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACGGTCTACAGCCATGG............................................................... 19 1 1 2.00 2 0 0 2 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCAA........................................................... 23 2 1 2.00 2 1 0 1 0 0 0
................................................................................................TGACAGTCTACAGCCATGGTCGT........................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTACG................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATG................................................................ 18 0 1 2.00 2 0 0 1 0 1 0
............................................................ACCGTGGCTTTCGATTGTTACTT............................................................................................... 23 1 1 2.00 2 0 0 1 1 0 0
................................................................................................TAACAGTCTACGGCCATGGTCG............................................................ 22 1 1 2.00 2 1 1 0 0 0 0
................................................................................................TAACAGTCTACGGCCATGGTCGT........................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...............................................................................................CTAACAGTCTACAGCCATGGTCGA........................................................... 24 2 1 2.00 2 1 1 0 0 0 0
................................................................................................TAACAGTCTACTGCCATGGTCG............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGCCTACAGCCATGGTCGT........................................................... 23 2 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAT.......................................................... 24 2 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCATA.......................................................... 24 3 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGCCGT........................................................... 23 2 1 2.00 2 1 0 1 0 0 0
...............................................................................................CTAACAGTCTACAGCCATGGTC............................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTACTA............................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGAA............................................................. 21 2 2 1.50 3 3 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGGCG............................................................ 21 1 2 1.50 3 2 0 1 0 0 0
............................................................ACCATGGCTTTCGATTGTTACT................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
................................................................................................TAACAGTCTACAGCCAAGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTGG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTTTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAG.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................ATTTAACAGTCTACAGCCATGGTCGA........................................................... 26 3 1 1.00 1 1 0 0 0 0 0
................................................................................................AAACAGTCTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGACTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTATAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTACTGTGG............................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAGA......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCGTGGTCGA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAATAGTCTACAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATCGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAAAAGTCTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................ATTTAATAGTCTACAGCCATGGTCG............................................................ 25 3 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCGTGGTCG............................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................CTACAGCCATGGTCG............................................................ 15 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACACCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGGCA............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTAT......................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGG............................................................... 17 0 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTTCTATTGTTA.................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0
................................................................................................TAACAGTCTACAGCCATGCTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGATT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
................................................................................................TAATAGTCTACAGCCATGGTCGTT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTACAA............................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
................................................................................................TAACAGTCTACAGCCATGGCC............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTTGT........................................................... 23 2 2 1.00 2 0 0 1 0 1 0
................................................................................................TCACAGTCTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGCCT............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAAGAGTCTACAGCCATGGTCGA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................AGTCTACAGCCATGGTCGT........................................................... 19 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................CTAACAGTCTACAGCCATGGTCGTA.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCAT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................TCTACAGCCATGGTCG............................................................ 16 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTATAGCCATGGTCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGTCATGGTCGA........................................................... 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTTA............................................................ 22 2 1 1.00 1 0 0 0 0 1 0
................................................................................................TCACAGTCTACAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTGCAGCCATGGT.............................................................. 20 1 1 1.00 1 0 0 1 0 0 0
................................................................................................TACCAGTCTACAGCCATGGTCGA........................................................... 23 2 1 1.00 1 0 0 1 0 0 0
................................................................................................TAACAGTCCACAGCCATGGTCT............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTAG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTAGAGCCATGGTCA............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTGA................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTC.......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TTACAGTCTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 0 1 0 0 0 0
................................................................................................TAACAGCCTACAGCCATGGTC............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGACG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGATCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTTG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTATAGCCATGGTCA............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................TTTCGATTGTTACTGTGGGAA......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1
................................................................................................TAACAGTCTGCAGCCATGGTCGA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTAG................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGCT.......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTAT................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTACC................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATCGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................ATAACAGTCTACAGCCATGGTCG............................................................ 23 1 1 1.00 1 0 1 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGGA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGACG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGCTT......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATTGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGG........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTTTGATTGTT................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGTCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCCA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................GCCGTGGCTTTCGATTGTTACT................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................AACAGTCTACAGCCTTGGTCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAGCAGTCTACAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTTTACAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTTG......................................................... 23 3 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACACTCTACAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................AGTCTACAGCCATGGTCG............................................................ 18 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTAGAGCCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAACCATGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGT.................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
................................................................................................TAACAGTCTACAGCCATGGTCAG........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTCCGATTGTTA.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTTTACAGCCATGGTCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGCCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCAGGGTCG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGACA......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGATTGTTACTGTGGGAA......................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
................................................................................................TAACAGTCTGCAGCCATGGTCGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTAG......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...........................................................AACCGTGGCTTTCGATTGTTAAA................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACGGTCTACAGCCATGGTCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TACCAGTCTACAGCCATGG............................................................... 19 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TCTAACAGTCTACAGCCATGGTCG............................................................ 24 2 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGTAC......................................................... 25 2 1 1.00 1 0 0 0 1 0 0
.................................................................................................CACAGTCTACAGCCATGGTCGT........................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.................................................................................................GACAGTCTACAGCCATGGTCG............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGTCATGGTCGA........................................................... 23 2 1 1.00 1 0 0 1 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTG............................................................. 21 1 1 1.00 1 0 0 0 1 0 0
................................................................................................TAACAGTCTACAGCCATGGACGT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTT............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
............................................................ACCGTGGCTTTCGCTTGTTACT................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1
...........................................................AACCGTGGCTTTCGATTGGT................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAAT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................ATTAACAGTCTACAGCCATGGTCGT........................................................... 25 3 3 0.67 2 1 1 0 0 0 0
................................................................................................TAACAGTCTACAGCTATGGTCGT........................................................... 23 2 3 0.67 2 2 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGGCGCA.......................................................... 22 2 2 0.50 1 1 0 0 0 0 0
...........................................................AAACGTGGCTTTCGATTGT.................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGGCGT........................................................... 22 2 2 0.50 1 0 0 1 0 0 0
.................................................................................................TACAGTCTACAGCCATGGTCGT........................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGTTT......................................................... 24 3 2 0.50 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCATT.......................................................... 24 3 2 0.50 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGCCATGGTCGAAA......................................................... 25 3 2 0.50 1 0 0 0 0 0 1
................................................................................................TAACAGTGTACAGCCATGGTCGT........................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCC............................................................ 21 1 3 0.33 1 0 1 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTTGT........................................................... 22 2 3 0.33 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGAGA......................................................... 24 3 3 0.33 1 1 0 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGTGT......................................................... 24 3 3 0.33 1 1 0 0 0 0 0
................................................................................................TAACAGTCTATACCCATGGTC............................................................. 21 2 3 0.33 1 0 1 0 0 0 0
................................................................................................AAACAGTCTACAGCCATGGTCGT........................................................... 23 2 3 0.33 1 1 0 0 0 0 0
................................................................................................TAACAGTCTACAGTCATGGTA............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGCCGT........................................................... 21 2 3 0.33 1 0 1 0 0 0 0
.................................................................................................AACAGTCTACAGCCATGGTCGTAA......................................................... 24 3 3 0.33 1 1 0 0 0 0 0
..................................................................................................ACAGTCTACAGCCATGGTCGTTA......................................................... 23 3 5 0.20 1 1 0 0 0 0 0

Anti-sense strand reads

GATCTCGACGGCGGGACCACGGCAGTCGTCGCGCGCGGGGCGGGGGCGCAGAGGTCCCGTTGGCACCGAAAGCTAACAATGACACCCTTGGCCTCCATTGTCAGATGTCGGTACCAGCGGGGCGTCGTGCGGGTGCGCGGCGCGGCGCGTCGTGCGGCGGTCGGGCCCTACCCCCTCT

*********************************************..((((((...((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).))))...)).))))..******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1274763

ovary
...............................................................................................CATTGTCAGATGTCGGTACCAG............................................................. 22 0 1 1.00 1 1

Generated: 09/01/2015 at 11:25 AM