ID:

ssc-mir-1306

 Coordinate:

chr14:55110958-55111037 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.0 -31.9 -31.7

Sense Strand Reads

GCGGTCATGGAGAACCCAGCTTGCCCCCTCCCAGCGCTGCCCCATGGACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGGCCGAACCCCCTGCCGAGGACCCGCTCGACTTCTACGGAGCTTCTCTTCTCTCCAAA

******************************************..(((...((((.(((((((......((.((((((((...((......))..)))))))).))...)))))))..))))...)))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR066810

testes		 SRR139076

testes		 SRR1274763

ovary		 SRR1274764

testes
.........................................................CCACCTCCCCTGCAAACGTCCA..................................................................................................... 22 0 1 363.00 363 73 213 61 13 3 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGT............................................................. 22 1 1 239.00 239 158 36 31 10 4 0
.........................................................CCACCTCCCCTGCAAACGTCC...................................................................................................... 21 0 1 211.00 211 47 108 50 2 4 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGA................................................................ 22 0 1 155.00 155 58 41 26 7 15 8
.........................................................CCACCTCCCCTGCAAACGTCCAT.................................................................................................... 23 1 1 124.00 124 80 21 3 16 4 0
.................................................................................................ACGTTGGCTCTGGTGGTGATG.............................................................. 21 0 1 67.00 67 44 12 5 4 2 0
...........................................................ACCTCCCCTGCAAACGTCCAGT................................................................................................... 22 0 1 62.00 62 15 26 19 1 1 0
................................................................................................GACGTTGGCTCTGGTGGTGAT............................................................... 21 0 1 56.00 56 37 11 7 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGAT............................................................... 20 0 1 51.00 51 40 4 0 6 1 0
................................................................................................GACGTTGGCTCTGGTGGTGATGT............................................................. 23 1 1 43.00 43 29 4 7 3 0 0
................................................................................................GACGTTGGCTCTGGTGGTGA................................................................ 20 0 1 35.00 35 20 8 4 3 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATG.............................................................. 22 0 1 35.00 35 23 6 6 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGA............................................................. 22 1 1 33.00 33 23 5 3 1 1 0
.........................................................CCACCTCCCCTGCAAACGTCCATT................................................................................................... 24 1 1 31.00 31 20 4 2 4 1 0
.........................................................CCACCTCCCCTGCAAACGTCCAA.................................................................................................... 23 1 1 25.00 25 10 7 2 5 1 0
................................................................................................GACGTTGGCTCTGGTGGTGATT.............................................................. 22 1 1 23.00 23 9 9 4 1 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAT............................................................... 23 0 1 22.00 22 13 2 5 1 1 0
...........................................................ACCTCCCCTGCAAACGTCCAG.................................................................................................... 21 0 1 16.00 16 11 0 3 2 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTAT........................................................... 24 2 1 13.00 13 10 2 0 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGA................................................................ 19 0 1 12.00 12 9 1 2 0 0 0
.........................................................CCACCTCCCCTGCAAACGTC....................................................................................................... 20 0 1 12.00 12 3 4 3 2 0 0
..........................................................CACCTCCCCTGCAAACGTCCA..................................................................................................... 21 0 1 11.00 11 4 2 5 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGT................................................................ 22 1 1 11.00 11 6 1 1 0 2 1
.................................................................................................ACGTTGGCTCTGGTGGTGATT.............................................................. 21 1 2 11.00 22 13 1 5 3 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTT............................................................ 23 2 1 10.00 10 10 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATGA............................................................. 23 1 1 8.00 8 8 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATA.............................................................. 22 1 1 8.00 8 6 2 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTG................................................................. 21 0 1 8.00 8 0 5 0 0 2 1
..............................................................................................TGGACGTTGGCTCTGGTGGTGAA............................................................... 23 1 1 7.00 7 3 1 2 0 0 1
.................................................................................................ACGTTGGCTCTGGTGGTGATGAA............................................................ 23 1 1 7.00 7 6 0 1 0 0 0
..........................................................CACCTCCCCTGCAAACGTCC...................................................................................................... 20 0 1 7.00 7 2 5 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTA............................................................ 23 1 1 7.00 7 4 0 1 1 1 0
................................................................................................GACGTTGGCTCTGGTGGTGAA............................................................... 21 1 1 5.00 5 2 1 1 0 0 1
.................................................................................................ACGTTGGCTCTGGTGGTGATA.............................................................. 21 1 1 5.00 5 3 0 1 0 1 0
.........................................................CCACCTCTCCTGCAAACGTCCA..................................................................................................... 22 1 1 5.00 5 4 0 0 1 0 0
..........................................................CACCTCCCCTGCAAACGTCCAT.................................................................................................... 22 1 1 5.00 5 4 0 1 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCA...................................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGG................................................................... 19 0 1 5.00 5 1 2 1 0 0 1
.........................................................CCACCTCCCCTGCAAACGTCCAGT................................................................................................... 24 0 1 4.00 4 1 2 1 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGATT.............................................................. 24 1 1 4.00 4 0 1 1 2 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGGGA................................................................ 22 1 1 4.00 4 1 1 1 1 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAAT.............................................................. 24 2 1 4.00 4 2 0 0 0 1 1
.................................................................................................ACGTTGGCTCTGGTGGTGATAA............................................................. 22 2 2 3.50 7 6 0 0 1 0 0
................................................................................................GACGTTGGCTCTGGTGGTG................................................................. 19 0 1 3.00 3 1 1 1 0 0 0
...........................................................ACCTCCCCTGCAAACGTCCA..................................................................................................... 20 0 1 3.00 3 1 0 2 0 0 0
................................................................................................GACGTTGGCTCTGGTGGGGAT............................................................... 21 1 1 3.00 3 0 2 1 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATAT............................................................. 22 2 1 3.00 3 1 0 0 2 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTAA........................................................... 24 2 1 3.00 3 3 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGTT............................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAG............................................................... 23 1 1 3.00 3 1 2 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGTA............................................................... 23 2 1 3.00 3 2 0 0 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATTT............................................................. 22 2 2 2.50 5 4 1 0 0 0 0
.........................................................CCACCTTCCCTGCAAACGTCCA..................................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGTAT.............................................................. 24 3 1 2.00 2 2 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGAAA.............................................................. 22 2 3 2.00 6 5 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGAAA........................................................... 24 2 1 2.00 2 2 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCATTT.................................................................................................. 25 2 1 2.00 2 1 1 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCAAT................................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTG................................................................. 18 0 1 2.00 2 2 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTTCATT................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGATA.............................................................. 24 1 1 2.00 2 1 0 1 0 0 0
.........................................................CCACCTCCCTTGCAAACGTCCA..................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.........................................................CCACCTCCCTTGCAAACGTCCAT.................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...........................................................ACCTCCTCTGCAAACGTCCAG.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGC............................................................. 22 1 1 2.00 2 1 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGCGAT............................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCATA................................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGG............................................................. 22 0 1 2.00 2 0 1 0 0 1 0
.........................................................TCACCTCCCCTGCAAACGTCCAT.................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACGTCCAT.................................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
.................................................................................................ACGTCGGCTCTGGTGGTGATGT............................................................. 22 2 1 2.00 2 1 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGG................................................................... 16 0 1 2.00 2 1 1 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGT................................................................ 20 1 1 2.00 2 1 0 0 1 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGT.................................................................. 20 0 1 2.00 2 0 1 0 0 1 0
.........................................................CCACTCCCCCTGCAAACGTCCA..................................................................................................... 22 2 3 1.67 5 1 2 2 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGGGATGT............................................................. 22 2 2 1.50 3 1 1 1 0 0 0
................................................................................................GACGTTGGCTCTGGTGGGGATGT............................................................. 23 2 2 1.50 3 1 2 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTTT........................................................... 24 3 3 1.33 4 2 1 0 1 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATGAA............................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCTCTGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGGTA.............................................................. 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................CACCTTCCCTGCAAACGTCCA..................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................CTGGACGTTGGCTCTGGTGGTGA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATAG............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCATGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GACTTTGGCTCTGGTGGTGAT............................................................... 21 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GACGTTGGCACTGGTGGTGAT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTTGTGGTGAT............................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGGGATGC............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGAGGTGA................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCTCCCCTGCAAACG......................................................................................................... 18 0 2 1.00 2 0 1 0 0 1 0
.................................................................................................ACGTTGGCTCTGGCGGTGATGT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAAA.............................................................. 24 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGA................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCTCCCCTGTAAACGTCC...................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATAGA............................................................ 24 1 1 1.00 1 0 0 0 1 0 0
.........................................................CCATCTCCCCTGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCTCCCCTGCAACCGTC....................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................CACCTCCCCTGCACACGTCCAA.................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGTTCTGGTGGTGAT............................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATGG............................................................. 23 0 1 1.00 1 0 0 0 1 0 0
.........................................................CCACCCCCCCTGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGACC.............................................................. 21 2 1 1.00 1 0 0 1 0 0 0
........................................................CCCACCTCCCCTGCAAACGTCCA..................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.........................................................CTACCTCCCCTGCAAACGTCCAT.................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0
.................................................................................................ACGTTGGCTTTGGTGGTGATGT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACGTCTAG.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATTT............................................................. 23 2 1 1.00 1 0 1 0 0 0 0
..............................................................TCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGGACGTTGGCTCTGGTGG................................................................... 51 0 1 1.00 1 0 0 0 0 1 0
..........................................................CACCTCTCCTGCAAACGTCCAT.................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAGT.............................................................. 24 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGGA............................................................ 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTA................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGTTT.............................................................. 24 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGGGGTGATGT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGT................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................CACCTCCCCTGCAAACGTCA...................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTAG........................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTTCAT.................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................ACCACCTCCCCTGCAAACGTCCA..................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTTCA..................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGTT............................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................ACCTTCCCTGCAAACGTCCAG.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCATGCAAACGTCCAT.................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
................................................................................................GGCGTTGGCTCTGGTGGTGATG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGGACGTTGGCTCTTGTGGTGA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGGCGTTGGCTCTGGTGGTGA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGGGGTGATG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGACGTTGGCTCTGGTGGTGAT............................................................... 22 0 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGAAT.............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGT..................................................................... 17 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGCGATG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGTTGAC............................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGAAG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GACGTCGGCTCTGGTGGTGAT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGCGGCGATG.............................................................. 21 2 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGCT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGAC............................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................CACCTCCCCTGCAAACGTCCAA.................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1
..............................................................................................TGGACGTTGGCTCTGGGGGTGA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCTTGCAAACGTCCAA.................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTAT................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................ACCTCCCTTGCAAACGTCCAGT................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................TCGTTGGCTCTGGTGGTGATGTA............................................................ 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATC.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACGTTGGCTCTGTTGGTGATGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
.........................................................CCAACTCCCCTGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGGACGTTGGCCCTGGTGGTGAT............................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................CACGTTGGCTCTGGTGGTGAT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGAC............................................................... 20 1 1 1.00 1 0 0 1 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCAG.................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
...........................................................ACCTCCCCTGCAAACGTCGAG.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGATTT............................................................. 25 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTGTGGTGGTGAA............................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGCCGTTGGCTCTGGTGGTGA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGTAAACGTCCA..................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTTC...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGGG................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTTAT............................................................... 20 1 1 1.00 1 0 0 1 0 0 0
................................................................................................GACGTTGGTTCTGGTGGTGAT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................TCGTTGGCTCTGGTGGTGATGT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGC................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAAAA............................................................. 25 3 1 1.00 1 0 0 0 0 1 0
.................................................................................................ACGTTGGCTCTGGAGGTGATG.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGCTGT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.........................................................CCACCCCCCCTGCAAACGTCC...................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGGGGTGA................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTGCAT......................................................... 26 3 1 1.00 1 0 0 0 1 0 0
.................................................................................................ATGTTGGCTCTGGTGGTGATG.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGACGTTGGCTCTGGTGGTGA................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
..................................................................................................CGTTGGCTCTGGTGGTGATG.............................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGCGGTGA................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGCT............................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTAA................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCAATT.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0
................................................................................................GACGTTGTCTCTGGTGGTGATG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACGTCCAGC................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCACCCCTGCAAACGTCC...................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGACGG............................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GGACGTTGGCTCTGGTGGTGAAT.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGGACGTTGGCTCTGGTGGTGAC............................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.........................................................CCACCACCCCTGCAAACGTCCA..................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATAT............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................CCCCTGCAAACGTCCA..................................................................................................... 16 0 2 0.50 1 0 1 0 0 0 0
.........................................................CCCCCTCCCCTGCAAACGTCCAT.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACG......................................................................................................... 16 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATGTGA........................................................... 24 3 4 0.50 2 2 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGGCCAT.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................GGACGTTGGCTCTGATGGTGT................................................................ 21 2 2 0.50 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCACACGTCCAT.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGT........................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGTTA.............................................................. 22 2 2 0.50 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGATTAG............................................................ 24 3 4 0.50 2 2 0 0 0 0 0
.........................................................CCATCTCCCCTGTAAACGTCCAT.................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0
...........................................................ACCTCCCCTGCAAACGTCCAGTACA................................................................................................ 25 3 2 0.50 1 0 0 0 1 0 0
.........................................................CCACCTCCCCCGCAAACGTCCA..................................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.........................................................CCACTCCCCCTGCAAACGTCCAT.................................................................................................... 23 3 4 0.50 2 2 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGGGGTGATGA............................................................. 22 2 2 0.50 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAACGTCCAAA................................................................................................... 24 2 2 0.50 1 0 1 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGAGT.............................................................. 22 2 2 0.50 1 1 0 0 0 0 0
.........................................................CCACCTCCCCTGCAAATGTCC...................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
..........................................................CACCTCCCCTGCAAACGTCCTC.................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGAAA.............................................................. 21 2 7 0.43 3 3 0 0 0 0 0
................................................................................................CACGTTGGCTCTGGTGGTGATGT............................................................. 23 2 3 0.33 1 0 0 1 0 0 0
.........................................................CCACCTCCCTTGCAAACGTCT...................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACGCCCAT.................................................................................................... 21 2 4 0.25 1 0 0 0 1 0 0
.........................................................CCACTCCCCCTGCAAACGTCC...................................................................................................... 21 2 4 0.25 1 0 0 1 0 0 0
.................................................................................................ACGTTGGCACTGGTGGTGATGT............................................................. 22 2 4 0.25 1 1 0 0 0 0 0
................................................................................................GATGTTGGCTCTGGTGGTGATGT............................................................. 23 2 5 0.20 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGTTGTT............................................................ 23 3 5 0.20 1 1 0 0 0 0 0
...........................................................ACCTCCCCTGCAAACGTCCAAAA.................................................................................................. 23 3 5 0.20 1 1 0 0 0 0 0
.................................................................................................ATGTTGGCTCTGGTGGTGATGT............................................................. 22 2 5 0.20 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGCGAAA.............................................................. 22 3 7 0.14 1 1 0 0 0 0 0
................................................................................................GACGTTGGCTCTGGTGGTGTAT.............................................................. 22 3 8 0.13 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGATTTT............................................................ 23 3 8 0.13 1 0 1 0 0 0 0
..............................................................CCCCCTGCAAACGTCCA..................................................................................................... 17 1 9 0.11 1 0 0 1 0 0 0
.................................................................................................ACGTTGGCTCTAGTGGTGATAA............................................................. 22 3 10 0.10 1 1 0 0 0 0 0
.................................................................................................ACGTTGGCTCTGGTGGTGGTGAT............................................................ 23 3 13 0.08 1 1 0 0 0 0 0
....................................................................................................TTGGCTCTGGTGGTGTTAGACG.......................................................... 22 3 13 0.08 1 1 0 0 0 0 0
.............................................................CCCCCCTGCAAACGTCCAT.................................................................................................... 19 2 18 0.06 1 1 0 0 0 0 0
................................................................CCCTGCAAACGTCCAT.................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0
.............................................................CCCCCCTGCAAACGTCCAA.................................................................................................... 19 2 20 0.05 1 0 0 0 1 0 0
.................................................................................................ACGTTGGCTCTGGTGGTAT................................................................ 19 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................ACATGGTCGACTTCTACGG................... 19 3 20 0.05 1 0 1 0 0 0 0
..................................................................................................CGCTGGCTCTGGTGGT.................................................................. 16 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

CGCCAGTACCTCTTGGGTCGAACGGGGGAGGGTCGCGACGGGGTACCTGTCAGAGGTGGTGGAGGGGACGTTTGCAGGTCACTACGTCTCCATTACCTGCAACCGAGACCACCACTACCTGTCCGGCTTGGGGGACGGCTCCTGGGCGAGCTGAAGATGCCTCGAAGAGAAGAGAGGTTT

*************************************************..(((...((((.(((((((......((.((((((((...((......))..)))))))).))...)))))))..))))...)))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:27 AM