ID:

ssc-mir-128-2

 Coordinate:

chr13:22859191-22859270 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.1 -44.0 -43.4 -43.3
mature

  1. ssc-mir-128-2  chr13:22859239-22859259 +
  2. ssc-mir-128-1  chr15:18661626-18661646 -
star

Sense Strand Reads

TCTGTGGCTCTCAGTCTGGAGGACCACAAGCCTCCCTCGGCGGCCGCTGTGCAGTGGGAAGGGGGGCCGAGGCACTGTCCGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTGTGTCACACTCCCAATGGGATGCCGCAACCCAGACAGAAGCCGGAGGCCTGCAG

***********************************((..........(((((((((((.((((((((((...((((((..((((.((.....))..))))))))))...)))))))))).))))))))).))...........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR139076

testes		 SRR1274763

ovary		 SRR066809

ovary		 SRR066810

testes		 SRR1274764

testes
..................................................................................................TCACAGTGAACCGGTCTCTTT............................................................. 21 0 2 5039.00 10078 8151 1031 303 268 208 117
..................................................................................................TCACAGTGAACCGGTCTCTTTA............................................................ 22 1 2 668.50 1337 1130 146 17 16 23 5
..................................................................................................TCACAGTGAACCGGTCTCTT.............................................................. 20 0 2 576.50 1153 855 90 120 38 26 24
..................................................................................................TCACAGTGAACCGGTCTCTTTC............................................................ 22 0 1 179.00 179 28 7 90 12 4 38
..................................................................................................TCACAGTGAACCGGTCTCT............................................................... 19 0 2 162.50 325 249 23 30 7 7 9
..................................................................................................TCACAGTGAACCGGTCTCTTA............................................................. 21 1 2 94.50 189 149 28 5 3 0 4
..................................................................................................TCACAGTGAACCGGTC.................................................................. 16 0 2 68.00 136 134 2 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCTTT............................................................. 19 0 2 65.00 130 112 17 0 0 1 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAA........................................................... 23 2 2 59.50 119 75 31 3 1 3 6
..................................................................................................TCACAGTGAACCGGTCTC................................................................ 18 0 2 55.50 111 100 6 3 1 0 1
..................................................................................................TCACAGTGAACCGGTCTCTTAA............................................................ 22 2 2 30.00 60 35 20 1 1 1 2
..................................................................................................TCACAGTGAACCGGTCTTT............................................................... 19 1 3 23.67 71 68 2 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCA........................................................... 23 1 1 21.00 21 9 2 3 5 0 2
..................................................................................................TCACAGTGAACCGGTCTTTTT............................................................. 21 1 2 18.50 37 31 5 0 0 0 1
..................................................................................................TCACAGTGAACCGGTCTCTTTG............................................................ 22 1 2 18.00 36 27 5 2 2 0 0
..................................................................................................TCACATTGAACCGGTCTCTTT............................................................. 21 1 2 14.00 28 24 4 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTCTTT............................................................. 20 0 2 13.50 27 26 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTTTT.............................................................. 20 1 2 13.50 27 25 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCCTT............................................................. 21 1 2 12.50 25 24 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTGA........................................................... 23 2 2 12.00 24 19 3 1 1 0 0
..................................................................................................TCACAGTGCACCGGTCTCTTT............................................................. 21 1 2 10.50 21 18 2 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCT........................................................... 23 1 2 10.50 21 6 2 8 3 1 1
..................................................................................................TCATAGTGAACCGGTCTCTTT............................................................. 21 1 2 10.00 20 19 0 0 1 0 0
..................................................................................................TCACAGCGAACCGGTCTCTTT............................................................. 21 1 2 9.00 18 17 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTTCTTT............................................................. 21 1 2 8.50 17 16 1 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCTTTA............................................................ 20 1 2 8.00 16 13 3 0 0 0 0
..................................................................................................TCACAGTGAACCGGGCTCTTT............................................................. 21 1 2 8.00 16 14 1 0 1 0 0
..................................................................................................TCACAGTGAATCGGTCTCTTT............................................................. 21 1 2 7.00 14 12 0 0 1 1 0
....................................................................................................ACAGTGAACCGGTCTCTT.............................................................. 18 0 2 7.00 14 10 4 0 0 0 0
..................................................................................................TCACAGTGAACCGGCCTCTTT............................................................. 21 1 2 6.00 12 11 0 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCG........................................................... 23 1 1 6.00 6 0 0 6 0 0 0
..................................................................................................CCACAGTGAACCGGTCTCTTT............................................................. 21 1 2 5.50 11 8 2 0 0 1 0
..................................................................................................TCACAGTGAACCGGTCTCTTGA............................................................ 22 2 2 5.50 11 6 3 0 1 1 0
..................................................................................................TCACAGTGACCCGGTCTCTTT............................................................. 21 1 2 5.50 11 9 1 0 0 0 1
..................................................................................................TCACAGTGAACCGGTCTCTAT............................................................. 21 1 2 5.00 10 7 3 0 0 0 0
..................................................................................................TCACAGTTAACCGGTCTCTTT............................................................. 21 1 2 4.50 9 9 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTA.............................................................. 20 1 2 4.50 9 8 0 1 0 0 0
..................................................................................................TCACAGTGAGCCGGTCTCTTT............................................................. 21 1 2 4.50 9 8 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTC............................................................. 21 1 2 4.50 9 4 2 2 0 0 1
..................................................................................................TCCCAGTGAACCGGTCTCTTT............................................................. 21 1 2 4.50 9 8 1 0 0 0 0
.................................................................................................CTCACAGTGAACCGGTCTCTTT............................................................. 22 0 2 4.00 8 2 6 0 0 0 0
..................................................................................................ACACAGTGAACCGGTCTCTTT............................................................. 21 1 2 4.00 8 6 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTAA............................................................. 21 2 2 4.00 8 6 2 0 0 0 0
..................................................................................................TCGCAGTGAACCGGTCTCTTT............................................................. 21 1 2 4.00 8 7 0 0 0 1 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAG........................................................... 23 2 2 4.00 8 1 1 5 1 0 0
..................................................................................................TCACCGTGAACCGGTCTCTTT............................................................. 21 1 2 4.00 8 6 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTG............................................................. 21 1 2 3.50 7 5 1 1 0 0 0
..................................................................................................TCACAGTGGACCGGTCTCTTT............................................................. 21 1 2 3.50 7 5 2 0 0 0 0
..................................................................................................TCACAGAGAACCGGTCTCTTT............................................................. 21 1 2 3.50 7 4 3 0 0 0 0
..................................................................................................TCACAGTGAACTGGTCTCTTT............................................................. 21 1 2 3.50 7 6 0 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTAG............................................................ 22 2 2 3.00 6 4 2 0 0 0 0
..................................................................................................TTACAGTGAACCGGTCTCTTT............................................................. 21 1 2 3.00 6 5 0 0 0 1 0
..................................................................................................TCACAGTGAACCAGTCTCTTT............................................................. 21 1 3 2.67 8 6 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCCCTTT............................................................. 21 1 2 2.50 5 4 1 0 0 0 0
..................................................................................................TCACGGTGAACCGGTCTCTTT............................................................. 21 1 2 2.50 5 4 1 0 0 0 0
..................................................................................................TCTCAGTGAACCGGTCTCTTT............................................................. 21 1 2 2.50 5 5 0 0 0 0 0
..................................................................................................TCATAGTGAACCGGTCTCTTTA............................................................ 22 2 2 2.00 4 3 1 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCTTA............................................................. 19 1 2 2.00 4 4 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCT................................................................. 17 0 2 2.00 4 1 0 3 0 0 0
.................................................................................................CTCACAGTGAACCGGTCTCTTTA............................................................ 23 1 2 2.00 4 1 3 0 0 0 0
...........................................................................................CGAGATCTCACAGTGAACCGGTC.................................................................. 23 3 1 2.00 2 0 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCC........................................................... 23 0 1 2.00 2 1 0 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAC........................................................... 23 1 1 2.00 2 0 0 1 1 0 0
..................................................................................................TCACAGTGAACCGGGCTCTT.............................................................. 20 1 2 2.00 4 3 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTT................................................................ 18 1 3 1.67 5 2 2 1 0 0 0
..................................................................................................TCACAGTGAACCGGTTTCTTTA............................................................ 22 2 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGCCTCTT.............................................................. 20 1 2 1.50 3 3 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTCTTTA............................................................ 21 1 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCTT.......................................................... 24 2 2 1.50 3 1 0 1 0 1 0
..................................................................................................TCACAGTGAACCGTTCTCTTT............................................................. 21 1 2 1.50 3 2 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTCT............................................................. 21 1 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCCGTCTCTTT............................................................. 21 1 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCCTTTT............................................................. 21 2 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACACTGAACCGGTCTCTTT............................................................. 21 1 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCCCAGTGAACCGGTCTCTTTA............................................................ 22 2 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGATCCGGTCTCTTT............................................................. 21 1 2 1.50 3 2 1 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTCTT.............................................................. 19 0 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGCGAACCGGTCTCTTTA............................................................ 22 2 2 1.50 3 2 1 0 0 0 0
..................................................................................................TCACAGTAAACCGGTCTCTTT............................................................. 21 1 2 1.50 3 1 2 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTC.............................................................. 20 1 2 1.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGACTCTTT............................................................. 21 1 3 1.33 4 4 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTTTCTTTA............................................................ 21 2 4 1.00 4 4 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTCTTTC............................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTTCTT.............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACTGGTCTCTT.............................................................. 20 1 2 1.00 2 1 1 0 0 0 0
..................................................................................................TCACAGGGAACCGGTCTCTTT............................................................. 21 1 2 1.00 2 0 2 0 0 0 0
.................................................................................................CTCACAGTGAACCGGTCTCTTA............................................................. 22 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCGCAGTGAACCGGTCTCTT.............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACATTGAACCGGTCTCT............................................................... 19 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGT................................................................... 15 0 3 1.00 3 3 0 0 0 0 0
..................................................................................................TCACAGTGGACCGGTCTCTTTA............................................................ 22 2 2 1.00 2 1 0 0 0 1 0
.................................................................................................CTCACAGTGAACCGGTCTCTTTC............................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.........................................GGCCGCTGTGCAGTGGGAAG....................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0
....................................................................................................ACAGTGAACCGGTCTCTTTC............................................................ 20 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAAAT......................................................... 25 3 1 1.00 1 0 0 1 0 0 0
..................................................................................................TCACAGTCAACCGGTCTCTTT............................................................. 21 1 2 1.00 2 1 0 0 1 0 0
...................................................................................................CACGGTGAACCGGTCTCTTT............................................................. 20 1 2 1.00 2 1 1 0 0 0 0
..................................................................................................TAACAGTGAACCGGTCTCTT.............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
.................................................................................................TTCACAGTGAACCGGTCTCTTT............................................................. 22 1 2 1.00 2 1 1 0 0 0 0
..................................................................................................TCACAGTGTACCGGTCTCTTT............................................................. 21 1 3 1.00 3 3 0 0 0 0 0
...................................................................................................CCCAGTGAACCGGTCTCTTT............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCT............................................................... 17 0 2 1.00 2 1 1 0 0 0 0
..................................................................................................TCACAGTGAAGCGGTCTCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACATTGAACCGGTCTCTTTA............................................................ 22 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGAGAACCGGTCTCTTTA............................................................ 22 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCACTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTATCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCA............................................................... 19 1 2 1.00 2 1 0 1 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTCTCA........................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................TAACAGTGAACCGGTCTCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAGA.......................................................... 24 3 2 1.00 2 0 1 0 1 0 0
..................................................................................................TCACAGTTAACCGGTCTCTT.............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACCGTGAACCGGGCTCTTT............................................................. 21 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCCCAGTGAACCGGTCTCTT.............................................................. 20 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCCGCC........................................................ 26 3 1 1.00 1 1 0 0 0 0 0
..................................................................................................GCACAGTGAACCGGTCTCTTT............................................................. 21 1 2 1.00 2 1 1 0 0 0 0
..................................................................................................TCACAGTGAACCGATCTCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGCCTCTTTA............................................................ 22 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAAACGGTCTCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGGGAACCGGTCTCTTTA............................................................ 22 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAAA.......................................................... 24 3 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAATGAACCGGTCTCTTT............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
.............................................................GGGGGCCGATGCACTGTAAGAGA................................................................................................ 23 3 1 1.00 1 0 0 0 0 1 0
..................................................................................................TCACAGCGAACCGGTCTCTT.............................................................. 20 1 2 1.00 2 1 0 1 0 0 0
.....................................................................................................CAGTGAACCGGTCTCTTT............................................................. 18 0 2 1.00 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAAT.......................................................... 24 3 3 0.67 2 1 0 0 0 0 1
..................................................................................................TCACAGTGAACTGGTCTCTTTA............................................................ 22 2 3 0.67 2 1 0 0 1 0 0
...................................................................................................CACAGTGAACCGGTC.................................................................. 15 0 3 0.67 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTTTA.............................................................. 20 2 3 0.67 2 2 0 0 0 0 0
..................................................................................................TCCCAGTGAACCGGTCTCTTA............................................................. 21 2 3 0.67 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTAAA........................................................... 23 3 3 0.67 2 0 0 0 1 1 0
..................................................................................................TCACAGTGAACCCGTCTCTTA............................................................. 21 2 3 0.67 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTT................................................................. 17 1 6 0.67 4 4 0 0 0 0 0
..................................................................................................TCACAGTGCACCGGTCTCTTTA............................................................ 22 2 4 0.50 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAATCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................GCACAGTGAACCGGTCTCT............................................................... 19 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAAACGGTCTCTT.............................................................. 20 1 2 0.50 1 0 0 1 0 0 0
..................................................................................................GCACAGTGAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCATAGTGAACCGGTCTCCTT............................................................. 21 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................CCACAGTGAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGGACCGGTCTCT............................................................... 19 1 2 0.50 1 0 0 0 0 1 0
..................................................................................................TTACAGTGAACCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTATA............................................................ 22 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................ACAGTGAACCGGTCTATTT............................................................. 19 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAATGAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTCAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................AAACAGTGAACCGGTCTCTTT............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGATCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTGAAC.......................................................... 24 3 2 0.50 1 0 0 0 1 0 0
..................................................................................................TCACAGTGAACCCGTCTCT............................................................... 19 1 2 0.50 1 0 0 0 1 0 0
..................................................................................................TCACAGTGAACCGGTCTTTTA............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCCCAGTGATCCGGTCTCTTT............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTGTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAAG.......................................................... 24 3 2 0.50 1 0 0 0 0 0 1
..................................................................................................TCACAGTGAACCGGTCTCTTTAGT.......................................................... 24 3 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACGGAGAACCGGTCTCTTT............................................................. 21 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................TCCCAGTGAACCGGTCTCT............................................................... 19 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTAAC.......................................................... 24 2 2 0.50 1 0 0 0 0 1 0
..................................................................................................TCACCGTGAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................TTCACAGTGAACCGGTCTCTTTA............................................................ 23 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCATAGTGAACCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTGTCTTA............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAGCCGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCGT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTTTCTTT............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCTTAA............................................................ 20 2 6 0.50 3 3 0 0 0 0 0
..................................................................................................TCACAGTGAACCGTTCTCTT.............................................................. 20 1 2 0.50 1 0 0 0 1 0 0
..................................................................................................TCACAGTGAACCGGTCTCC............................................................... 19 1 2 0.50 1 0 0 1 0 0 0
..................................................................................................TCTCAGTGAACCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGAGAACCGGCCTCTTT............................................................. 21 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTCGCACC....................................................... 27 3 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGCACCGGTCTCT............................................................... 19 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTTTC........................................................... 23 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................ACACAGTGAACCGGTCTCTTTA............................................................ 22 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTCCTTT............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACAGGTCTCTTTA............................................................ 22 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTGTTT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACTGTGAACCGGTCTCTTT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGATCCGGTTTCTTT............................................................. 21 2 4 0.50 2 2 0 0 0 0 0
..................................................................................................TCGCAGTGAACCGGTCTCTTTCT........................................................... 23 2 2 0.50 1 0 1 0 0 0 0
.................................................................................................CTCACCGTGAACCGGTCTCTTT............................................................. 22 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACATTGAACCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGCGAACCGGTCTCTTA............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCGTT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAATGAACCGGTCTCTTTG............................................................ 22 2 2 0.50 1 0 0 0 1 0 0
..................................................................................................TCAAAGTGAACCGGTCTCTTT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACGGGGAACCGGTCTCTT.............................................................. 20 2 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTATTT............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTCTC........................................................... 23 2 2 0.50 1 0 0 1 0 0 0
.................................................................................................CTCACAGTGAACCGGTCTCTT.............................................................. 21 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................TCACAGTGACCCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................ACATTGAACCGGTCTCTTT............................................................. 19 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................TCACAGTCAACCGGTCTCTT.............................................................. 20 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCG............................................................... 19 1 2 0.50 1 0 0 0 0 0 1
..................................................................................................TCACACTGAACCGGTCTC................................................................ 18 1 4 0.50 2 1 1 0 0 0 0
..................................................................................................TCACAGTGGACCGGTCTCTT.............................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTTT............................................................... 18 1 5 0.40 2 2 0 0 0 0 0
..................................................................................................TTACAGTGAACCGGTC.................................................................. 16 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................CACAGTGAACCGGGCTCT............................................................... 18 1 3 0.33 1 1 0 0 0 0 0
....................................................................................................ACGGTGAACCGGTCTCTTA............................................................. 19 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAAACGGTCTCTTA............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACGGTGAACCGGGCTCTTT............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTTTTTA............................................................ 22 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTGAA........................................................... 23 3 3 0.33 1 0 1 0 0 0 0
..................................................................................................CCACAGTGAACCGGTCTCT............................................................... 19 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCTCAGTGAACCGGTCTCTTTA............................................................ 22 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTTC................................................................ 18 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGTACCGGTCTCTTTA............................................................ 22 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCAGAGTGAACCGGTCTC................................................................ 18 1 3 0.33 1 1 0 0 0 0 0
....................................................................................................ACAGTGAACCGGTCTCTTTAA........................................................... 21 2 3 0.33 1 0 1 0 0 0 0
..................................................................................................TCACATTGAACCGGTCTTTTT............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCCCT............................................................... 19 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................ACACAGTGAACCGGTCTCTTA............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
.................................................................................................CTCACAGTGAACCGGT................................................................... 16 0 3 0.33 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTTTTT.............................................................. 20 2 17 0.29 5 4 1 0 0 0 0
...................................................................................................TCCAGTGAACCGGTCTCTTT............................................................. 20 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGCCTC................................................................ 18 1 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGGTTCTTT............................................................. 21 2 4 0.25 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTATA.............................................................. 20 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGGCTCTTTA............................................................ 22 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCAGAGTGAACCGTTCTCTTT............................................................. 21 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGACTCCTT............................................................. 21 2 4 0.25 1 1 0 0 0 0 0
...............................................................................................ATTTCACAGTGAACCGGTCTCTTT............................................................. 24 2 4 0.25 1 0 0 0 0 1 0
..................................................................................................TCCCAGTGACCCGGTCTCTTT............................................................. 21 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAATCGGTCTCTTTA............................................................ 22 2 4 0.25 1 1 0 0 0 0 0
...................................................................................................CACAGTGAACCGGTCTCTTGA............................................................ 21 2 4 0.25 1 0 0 0 1 0 0
..................................................................................................TCACAGTGAACCGGTCTAG............................................................... 19 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................ACACAGTGAACCGGTCTCTTAA............................................................ 22 3 9 0.22 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTTTTTAA........................................................... 23 3 5 0.20 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTTAGA........................................................... 23 3 5 0.20 1 0 0 1 0 0 0
..................................................................................................TCACAGTTAACAGGTCTCTTT............................................................. 21 2 5 0.20 1 0 1 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTCTGAA............................................................ 22 3 5 0.20 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAATCGGTCTCCTT............................................................. 21 2 5 0.20 1 0 0 0 1 0 0
..................................................................................................TCACAGTGAGCCGGTCTCTA.............................................................. 20 2 5 0.20 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTAA............................................................... 19 2 11 0.18 2 1 0 1 0 0 0
....................................................................................................ACAGTGAACCGGTCTTT............................................................... 17 1 6 0.17 1 1 0 0 0 0 0
..................................................................................................TCACAGTGATTCGGTCTCTTT............................................................. 21 2 6 0.17 1 1 0 0 0 0 0
..................................................................................................TCACAGCGAACCGGTC.................................................................. 16 1 6 0.17 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCTTA............................................................... 19 2 12 0.17 2 2 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTTTTTTT............................................................. 21 2 8 0.13 1 1 0 0 0 0 0
....................................................................................................AGAGTGAACCGGTCTCTTTA............................................................ 20 2 8 0.13 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCTGTCTGTTT............................................................. 21 2 8 0.13 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGTCCTT............................................................... 19 2 9 0.11 1 1 0 0 0 0 0
..................................................................................................TCACAGTGCACCGGTC.................................................................. 16 1 9 0.11 1 1 0 0 0 0 0
..................................................................................................TCGCAGTGAACCGGTCTCTAA............................................................. 21 3 11 0.09 1 1 0 0 0 0 0
....................................................................................................ACAGGGAACCGGTCTCTTA............................................................. 19 2 11 0.09 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGATC.................................................................. 16 1 13 0.08 1 1 0 0 0 0 0
..................................................................................................TCACAGTGAACCGGCCTTT............................................................... 19 2 17 0.06 1 1 0 0 0 0 0
..................................................................................................TCAGAGTGAACCGGTC.................................................................. 16 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

AGACACCGAGAGTCAGACCTCCTGGTGTTCGGAGGGAGCCGCCGGCGACACGTCACCCTTCCCCCCGGCTCCGTGACAGGCTCTCACTCATCGTCCAGAGTGTCACTTGGCCAGAGAAAGGGATGACACAGTGTGAGGGTTACCCTACGGCGTTGGGTCTGTCTTCGGCCTCCGGACGTC

***********************************((..........(((((((((((.((((((((((...((((((..((((.((.....))..))))))))))...)))))))))).))))))))).))...........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR139075

testes
...........................................................................................................................................................GGTATGTCTTCGGCCTC........ 17 1 7 0.14 1 1 0
..............................................................................................CCAGAGTGTCATTTGGCGGGA................................................................. 21 3 13 0.08 1 1 0
...........................................................................................................TGGCCAGAGACAGGGATTA...................................................... 19 2 19 0.05 1 0 1

Generated: 09/01/2015 at 11:26 AM