ID:

ssc-mir-126

Coordinate:

chr1:313734669-313734741 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.3

Sense Strand Reads

CCCACCGGCGTCCCTGCCCAGGCAGCCTGGGGACACAGCGCTCGCGCTGGCGACGGGACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCTGTCGGCAGCCCAGCACCGAGAGCACGGCGCGGACCTCGGCTGGAACCACCCTCG

*******************************************..((((.((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..)))))).))))....*****************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR1274764

testes
SRR1274763

ovary
SRR066810

testes
SRR139075

testes
SRR139076

testes
..........................................................CATTATTACTTTTGGTACGCG.............................................................................................. 21 0 1 25163.00 25163 2250 14458 6727 975 642 111
...............................................................................................TCGTACCGTGAGTAATAATGCG........................................................ 22 0 1 17232.00 17232 12814 763 751 2650 237 17
................................................................................................CGTACCGTGAGTAATAATGCG........................................................ 21 0 1 4876.00 4876 3240 316 355 788 152 25
..........................................................CATTATTACTTTTGGTACGCGA............................................................................................. 22 1 1 3380.00 3380 338 1846 462 313 335 86
...............................................................................................TCGTACCGTGAGTAATAATGC......................................................... 21 0 1 1028.00 1028 447 183 131 171 85 11
...............................................................................................TCGTACCGTGAGTAATAATGCGA....................................................... 23 1 1 956.00 956 469 95 95 159 128 10
...............................................................................................TCGTACCGTGAGTAATAATG.......................................................... 20 0 1 601.00 601 241 146 76 121 17 0
................................................................................................CGTACCGTGAGTAATAATGCGT....................................................... 22 1 1 581.00 581 120 213 96 64 67 21
................................................................................................CGTACCGTGAGTAATAATGCGA....................................................... 22 1 1 481.00 481 209 51 42 78 81 20
..........................................................CATTATTACTTTTGGTACGCGT............................................................................................. 22 1 1 468.00 468 46 84 38 50 203 47
...............................................................................................TCGTACCGTGAGTAATAATGCA........................................................ 22 1 1 436.00 436 210 44 19 153 10 0
..........................................................CATTATTACTTTTGGTACGC............................................................................................... 20 0 1 385.00 385 55 131 44 41 94 20
..............................................................................................CTCGTACCGTGAGTAATAATGCG........................................................ 23 0 1 369.00 369 245 12 37 44 27 4
...............................................................................................TCGTACCGTGAGTAATAATGCGT....................................................... 23 1 1 307.00 307 114 78 42 47 24 2
..........................................................CATTATTACTTTTGGTACG................................................................................................ 19 0 1 277.00 277 64 119 41 30 19 4
................................................................................................CGTACCGTGAGTAATAATGC......................................................... 20 0 1 233.00 233 135 33 23 31 7 4
..............................................................................................CTCGTACCGTGAGTAATAATGC......................................................... 22 0 1 215.00 215 79 21 15 30 63 7
.................................................................................................GTACCGTGAGTAATAATGCG........................................................ 20 0 1 215.00 215 126 1 0 27 56 5
..........................................................CATTATTACTTTTGGTACGCA.............................................................................................. 21 1 1 172.00 172 2 104 57 4 3 2
...............................................................................................TCGTACCGTGAGTAATAATGA......................................................... 21 1 1 136.00 136 60 17 5 30 22 2
...........................................................ATTATTACTTTTGGTACGCG.............................................................................................. 20 0 1 131.00 131 17 17 15 10 60 12
................................................................................................CGTACCGTGAGTAATAATG.......................................................... 19 0 1 69.00 69 27 17 18 7 0 0
............................................................................................ATTTCGTACCGTGAGTAATAATGCG........................................................ 25 2 1 64.00 64 52 0 0 12 0 0
...............................................................................................TCGTACCGTGAGTAATAATGAA........................................................ 22 2 1 64.00 64 17 15 9 7 15 1
..........................................................CATTATTACTTTTGGTACGCGC............................................................................................. 22 0 1 61.00 61 9 16 10 4 17 5
..........................................................CATTATTACTTTTGGTACGCGAA............................................................................................ 23 2 1 57.00 57 1 43 4 1 8 0
..........................................................CATTATTACCTTTGGTACGCG.............................................................................................. 21 1 1 48.00 48 3 36 7 0 2 0
...............................................................................................TCGTACCGTGAGTAATAAT........................................................... 19 0 1 48.00 48 12 22 8 3 3 0
...............................................................................................TCGTACTGTGAGTAATAATGCG........................................................ 22 1 1 45.00 45 32 3 0 9 1 0
..........................................................CATTATTACTTTTGGTACGCGG............................................................................................. 22 1 1 42.00 42 9 13 6 8 5 1
...............................................................................................TCGTACCGTGAGTAATAA............................................................ 18 0 1 40.00 40 0 18 21 0 1 0
.................................................................................................GTACCGTGAGTAATAATGCGA....................................................... 21 1 1 37.00 37 12 0 0 6 15 4
................................................................................................CGTACCGTGAGTAATAATGCA........................................................ 21 1 1 36.00 36 13 9 2 9 1 2
.............................................................................................ATTCGTACCGTGAGTAATAATGCG........................................................ 24 1 1 35.00 35 29 0 0 6 0 0
...........................................................ATTATTACTTTTGGTACGCGA............................................................................................. 21 1 1 33.00 33 4 5 0 3 15 6
..............................................................................................CTCGTACCGTGAGTAATAATG.......................................................... 21 0 1 31.00 31 3 13 3 6 4 2
...............................................................................................TTGTACCGTGAGTAATAATGCG........................................................ 22 1 1 29.00 29 21 0 1 5 2 0
...............................................................................................TCGTACCGTGAGTAATAATGCT........................................................ 22 1 1 26.00 26 5 14 3 3 1 0
.........................................................ACATTATTACTTTTGGTACGCG.............................................................................................. 22 0 1 21.00 21 8 0 10 1 2 0
..........................................................CATTATTATTTTTGGTACGCG.............................................................................................. 21 1 1 20.00 20 4 3 0 1 10 2
...............................................................................................CCGTACCGTGAGTAATAATGCG........................................................ 22 1 1 19.00 19 16 0 0 2 1 0
...............................................................................................TCGTACCGTGAGTAATAATGAAA....................................................... 23 3 2 18.00 36 7 19 2 4 4 0
................................................................................................CGTACCGTGAGTAATAATGA......................................................... 20 1 1 17.00 17 8 1 0 6 1 1
..........................................................CATTATTACTTTTGGTACGCGCT............................................................................................ 23 0 1 17.00 17 5 4 2 1 4 1
........................................CTCGCGCTGGCGACGGGA................................................................................................................... 18 0 1 17.00 17 11 2 2 2 0 0
................................................................................................CGTACCGTGAGTAATAATGAA........................................................ 21 2 1 16.00 16 7 1 0 5 2 1
...............................................................................................TCGTACCGTGAGTAATAATGCAA....................................................... 23 2 1 16.00 16 2 8 2 3 1 0
..........................................................CATTATTACTTTTGGTAC................................................................................................. 18 0 1 14.00 14 1 5 1 0 7 0
...........................................................ATTATTACTTTTGGTACGCGT............................................................................................. 21 1 1 14.00 14 0 0 0 0 13 1
..........................................................CATTATTACTTTTGGTACGTG.............................................................................................. 21 1 1 13.00 13 1 5 2 0 5 0
.................................................................................................GTACCGTGAGTAATAATGC......................................................... 19 0 1 13.00 13 3 0 0 0 9 1
..........................................................CATTATTACTTTTGGTACGCGGA............................................................................................ 23 2 1 13.00 13 2 4 0 6 1 0
................................................................................................CGTACCGTGAGTAATAATGCGAA...................................................... 23 2 1 13.00 13 5 1 0 3 2 2
.................................................................................................GTACCGTGAGTAATAATGCGT....................................................... 21 1 1 13.00 13 6 0 0 3 4 0
................................................................................................CGTACCGTGAGTAATAATGCAA....................................................... 22 2 1 13.00 13 1 4 1 1 5 1
..........................................................CATTATTACTTTTGGTACGCGTA............................................................................................ 23 2 1 12.00 12 2 4 0 0 4 2
......................................................................................................GTGAGTAATAATGCG........................................................ 15 0 1 12.00 12 9 0 0 3 0 0
...............................................................................................TCGTACCGTGAGTAATAATACG........................................................ 22 1 1 12.00 12 11 1 0 0 0 0
...............................................................................................TCGTATCGTGAGTAATAATGCG........................................................ 22 1 1 12.00 12 8 0 0 1 3 0
..........................................................CATTATTACTTTCGGTACGCG.............................................................................................. 21 1 1 12.00 12 3 4 3 0 0 2
..........................................................CATTATTACTTTTGGTACGA............................................................................................... 20 1 1 11.00 11 3 4 1 2 0 1
..........................................................CCTTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 11.00 11 0 4 1 0 4 2
................................................................................................CGTACCGTGAGTAATAA............................................................ 17 0 1 11.00 11 0 5 6 0 0 0
.....................................................................................................................CTGTCGGCAGCCCAGCACCG.................................... 20 0 1 11.00 11 5 1 2 3 0 0
...............................................................................................TCGTACCGTGAGTAGTAATGCG........................................................ 22 1 1 10.00 10 9 0 0 1 0 0
...............................................................................................TCATACCGTGAGTAATAATGCG........................................................ 22 1 1 10.00 10 8 0 0 2 0 0
...............................................................................................TCGCACCGTGAGTAATAATGCG........................................................ 22 1 1 9.00 9 8 0 0 1 0 0
.....................................................................................................................CTGTCGGCAGCCCAGCACCGA................................... 21 0 1 9.00 9 5 2 2 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCC........................................................ 22 1 1 9.00 9 1 5 1 2 0 0
..........................................................CATTATTACTTTTGGTACGCC.............................................................................................. 21 1 1 9.00 9 0 8 1 0 0 0
..........................................................CATTATTACCTTTGGTACGCGA............................................................................................. 22 2 1 9.00 9 0 4 1 0 4 0
..........................................................TATTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 9.00 9 1 5 1 1 1 0
...............................................................................................TCGTACCGTGAGCAATAATGCG........................................................ 22 1 1 9.00 9 5 0 0 4 0 0
...............................................................................................TCGTACCGTGAGTAATAGTGCG........................................................ 22 1 1 9.00 9 6 0 1 2 0 0
................................................................................................CGTACTGTGAGTAATAATGCG........................................................ 21 1 1 9.00 9 7 1 0 1 0 0
......................................CGCTCGCGCTGGCGACGGGA................................................................................................................... 20 0 1 8.00 8 7 0 0 1 0 0
..........................................................CATTATTACTTTTGGCACGCG.............................................................................................. 21 1 1 8.00 8 0 5 2 0 1 0
..............................................................................................CTCGTACCGTGAGTAATAATGCA........................................................ 23 1 1 8.00 8 2 1 3 2 0 0
..........................................................CGTTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 8.00 8 0 3 2 1 2 0
...............................................................................................TCGTACCGTAAGTAATAATGCG........................................................ 22 1 1 8.00 8 5 1 0 2 0 0
.....................................................................................................CGTGAGTAATAATGCG........................................................ 16 0 1 8.00 8 3 1 1 1 2 0
..............................................................................................CTCGTACCGTGAGTAATAATGA......................................................... 22 1 1 8.00 8 1 0 0 0 6 1
................................................................................................TGTACCGTGAGTAATAATGCG........................................................ 21 1 1 8.00 8 4 0 0 4 0 0
..........................................................CATCATTACTTTTGGTACGCG.............................................................................................. 21 1 1 8.00 8 2 3 3 0 0 0
.................................................................................................GTACCGTGAGTAATAATGCA........................................................ 20 1 1 7.00 7 2 0 0 1 4 0
...............................................................................................TCGTACCGTGAGTAATAATGTG........................................................ 22 1 1 7.00 7 5 0 0 2 0 0
...........................................................ATTATTACTTTTGGTACGCGCT............................................................................................ 22 0 1 7.00 7 1 0 1 1 4 0
...............................................................................................TCGTACCGTGAGTAATAATGCGAGA..................................................... 25 3 1 7.00 7 5 0 0 2 0 0
..........................................................CATTGTTACTTTTGGTACGCG.............................................................................................. 21 1 1 7.00 7 0 4 3 0 0 0
..........................................................CATCATTACTTTTGGTACGCGA............................................................................................. 22 2 1 7.00 7 2 1 1 1 2 0
..........................................................CATTATTACTTTTGGTGCGCG.............................................................................................. 21 1 1 7.00 7 0 2 4 1 0 0
...............................................................................................TCGTACCGTGAGTAATAATGT......................................................... 21 1 1 7.00 7 3 1 1 0 2 0
...............................................................................................TCGTACCGTGGGTAATAATGCG........................................................ 22 1 1 7.00 7 6 0 0 1 0 0
..........................................................CACTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 7.00 7 1 4 1 1 0 0
..............................................................................................CTCGTACCGTGAGTAATAATGCC........................................................ 23 1 1 7.00 7 0 3 4 0 0 0
..........................................................CATTATTACTTTTGGTACACG.............................................................................................. 21 1 1 7.00 7 0 3 1 2 1 0
.......................................GCTCGCGCTGGCGACGGGA................................................................................................................... 19 0 1 6.00 6 4 0 0 2 0 0
............................................................................................ATTTCGTACCGTGAGTAATAATGA......................................................... 24 3 1 6.00 6 5 0 0 1 0 0
...............................................................................................ACGTACCGTGAGTAATAATGCG........................................................ 22 1 1 6.00 6 6 0 0 0 0 0
..............................................................................................CTCGTACCGTGAGTAATAA............................................................ 19 0 1 6.00 6 0 3 3 0 0 0
...............................................................................................TCGTACCGTGAGTAATAACGCG........................................................ 22 1 1 6.00 6 5 0 0 1 0 0
................................................................................................CGTACCGTGAGTAATAATGCGTA...................................................... 23 2 1 6.00 6 3 1 1 0 0 1
...............................................................................................TCGTACTGTGAGTAATAATGC......................................................... 21 1 1 6.00 6 3 0 0 1 2 0
..........................................................CATTATTACTTTTGGTA.................................................................................................. 17 0 1 6.00 6 0 0 2 0 4 0
..........................................................CATTATTACTTTTGATACGCG.............................................................................................. 21 1 1 6.00 6 1 2 3 0 0 0
..............................................................................................CTCGTACCGTGAGTAATAATGCGA....................................................... 24 1 1 6.00 6 2 0 2 1 1 0
..........................................................CATTATTACTTTTGCTACGCG.............................................................................................. 21 1 1 6.00 6 0 3 0 0 2 1
..........................................................CATTATCACTTTTGGTACGCG.............................................................................................. 21 1 1 6.00 6 0 2 2 0 2 0
...............................................................................................TCGTACCGTGAGTAATAATGCGG....................................................... 23 1 1 6.00 6 4 1 0 1 0 0
...............................................................................................TCGTACCGCGAGTAATAATGCG........................................................ 22 1 1 6.00 6 5 0 0 1 0 0
................................................................................................CGTACCGTGAGTAATAATGAAA....................................................... 22 3 4 5.25 21 5 7 2 4 3 0
...............................................................................................TCGTACCGTGAGTAATGATGCG........................................................ 22 1 1 5.00 5 3 0 0 2 0 0
..........................................................CATTATTACTTTTGGGACGCG.............................................................................................. 21 1 1 5.00 5 0 0 1 0 3 1
..........................................................CATTATTACTTCTGGTACGCG.............................................................................................. 21 1 1 5.00 5 2 2 0 1 0 0
.................................................................................................GTACCGTGAGTAATAATG.......................................................... 18 0 1 5.00 5 0 0 0 1 4 0
..............................................................................................CTCGTACCGTGAGTAATAATGCGT....................................................... 24 1 1 5.00 5 3 0 2 0 0 0
..............................................................................................CTCGTACCGTGAGTAATAAT........................................................... 20 0 1 5.00 5 0 3 1 0 1 0
..........................................................CATTATTACTTTTGGTACGCGCA............................................................................................ 23 1 1 5.00 5 1 0 0 0 3 1
..........................................................CATTATTACTTTTGGTATGCG.............................................................................................. 21 1 1 5.00 5 3 1 0 0 1 0
............................................................................................TTATCGTACCGTGAGTAATAATGCG........................................................ 25 3 1 5.00 5 4 0 0 1 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCGC....................................................... 23 0 1 5.00 5 0 1 2 1 1 0
..........................................................CATTATTCCTTTTGGTACGCG.............................................................................................. 21 1 1 5.00 5 1 2 1 0 1 0
..........................................................CATTATTACTCTTGGTACGCG.............................................................................................. 21 1 1 5.00 5 0 4 0 0 1 0
..........................................................CATTATTACTTTTGGTACCCG.............................................................................................. 21 1 1 5.00 5 0 4 1 0 0 0
..........................................................CATTATTACTTTTGGTACGCT.............................................................................................. 21 1 1 5.00 5 1 2 1 0 1 0
...............................................................................................TCGTACCGTGAGTAATAATGTGA....................................................... 23 2 1 5.00 5 3 1 0 0 1 0
..........................................................CATTATTACTTTTGGTACGCGAAA........................................................................................... 24 3 3 5.00 15 0 13 2 0 0 0
................................................................................................CGTACCGTGAGTAATAATGCC........................................................ 21 1 1 4.00 4 2 1 1 0 0 0
................................................................................................CATACCGTGAGTAATAATGCG........................................................ 21 1 1 4.00 4 4 0 0 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCGAAA..................................................... 25 3 1 4.00 4 3 0 0 1 0 0
...............................................................................................TCGTACCGTGTGTAATAATGCG........................................................ 22 1 1 4.00 4 3 0 0 1 0 0
.........................................TCGCGCTGGCGACGGGA................................................................................................................... 17 0 1 4.00 4 3 0 1 0 0 0
................................................................................................CGTATCGTGAGTAATAATGCG........................................................ 21 1 1 4.00 4 4 0 0 0 0 0
..........................................................CATTATTACTTTTGTTACGCG.............................................................................................. 21 1 1 4.00 4 1 0 0 0 2 1
...............................................................................................TCGTACCGTGATTAATAATGCG........................................................ 22 1 1 4.00 4 3 0 0 1 0 0
...............................................................................................TCGTACTGTGAGTAATAATGCGA....................................................... 23 2 1 4.00 4 1 0 0 0 3 0
................................................................................................CGTACCGTGAGTAATAATGCGAAA..................................................... 24 3 1 4.00 4 1 0 0 0 2 1
...............................................................................................TCGTACCGTGAGTAATAATGAGA....................................................... 23 2 1 4.00 4 2 0 0 2 0 0
...............................................................................................TCGTACCGTGAGTAACAATGCG........................................................ 22 1 1 4.00 4 3 0 1 0 0 0
...............................................................................................TCGTACTGTGAGTAATAATGCGT....................................................... 23 2 1 4.00 4 2 0 0 0 2 0
..........................................................CATTATTACTTTTGGTACGCGGTAG.......................................................................................... 25 3 1 4.00 4 0 0 0 0 4 0
................................................................................................CGTACCGTGAGTAATAATGTG........................................................ 21 1 1 4.00 4 4 0 0 0 0 0
...............................................................................................TCGTACCATGAGTAATAATGCG........................................................ 22 1 1 4.00 4 3 0 0 1 0 0
..........................................................CATTATTACTTTTAGTACGCG.............................................................................................. 21 1 1 4.00 4 1 2 1 0 0 0
................................................................................................CGTACCGTGAGTAATAATGCT........................................................ 21 1 1 4.00 4 0 1 0 1 0 2
...............................................................................................TCGTACCGTGAGTGATAATGCG........................................................ 22 1 1 4.00 4 4 0 0 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATTCG........................................................ 22 1 1 4.00 4 3 0 0 0 1 0
...............................................................................................TCGTACCGTGAGTAATAATA.......................................................... 20 1 1 4.00 4 1 0 0 2 0 1
.............................................................CATTACTTTTGGTACGCG.............................................................................................. 18 1 1 4.00 4 0 1 0 0 2 1
................................................................................................CGCACCGTGAGTAATAATGCG........................................................ 21 1 1 4.00 4 2 0 0 2 0 0
...............................................................................................TCGTACCGTGAGTAATCATGCG........................................................ 22 1 1 3.00 3 3 0 0 0 0 0
................................................................................................CGTACCGTGAGTAATAATGTGT....................................................... 22 2 1 3.00 3 0 0 0 0 3 0
.............................................................................................ATTCGTACCGTGAGTAATAATGC......................................................... 23 1 1 3.00 3 2 0 0 1 0 0
...........................................................ATTATTACTTTTGGTACG................................................................................................ 18 0 1 3.00 3 1 0 0 1 0 1
..........................................................CATTATTATTTTTGGTACGCGA............................................................................................. 22 2 2 3.00 6 0 1 0 0 3 2
..........................................................CATTATTACTTTTGGTACGCGTT............................................................................................ 23 1 1 3.00 3 0 1 0 0 1 1
...............................................................................................TCGTACCGTGAATAATAATGCG........................................................ 22 1 1 3.00 3 1 1 0 0 1 0
...............................................................................................TCGTATCGTGAGTAATAATGCGA....................................................... 23 2 1 3.00 3 1 0 0 0 2 0
...............................................................................................TCGTACCGTGAGTAATAATGCGAA...................................................... 24 2 1 3.00 3 1 0 0 1 1 0
...........................................................ATTATTACTTTTGGTACGC............................................................................................... 19 0 1 3.00 3 0 0 0 0 2 1
...............................................................................................TCGTACCGTTAGTAATAATGCG........................................................ 22 1 1 3.00 3 0 0 0 0 3 0
................................................................................................CGTACCGTGATTAATAATGCG........................................................ 21 1 1 3.00 3 1 0 0 1 1 0
.........................................................ACATTATTACTTTTGGTACGCGA............................................................................................. 23 1 1 3.00 3 1 0 1 1 0 0
..........................................................CATTATTAGTTTTGGTACGCG.............................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0
..........................................................CATTATTACTTTTGATACGCGA............................................................................................. 22 2 1 3.00 3 1 0 0 0 2 0
...............................................................................................TCGTACCGTGAGTAATTATGCG........................................................ 22 1 1 3.00 3 3 0 0 0 0 0
...............................................................................................TCGTACCGTGAGTAATAAAGCG........................................................ 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................CATTATTACTTTTGGAACGCG.............................................................................................. 21 1 1 3.00 3 0 1 1 0 1 0
..........................................................CATTATTACTTTTTGTACGCG.............................................................................................. 21 1 1 3.00 3 1 0 0 0 1 1
................................................................................................CGTACCGTGAGTAATAATGCGG....................................................... 22 1 1 3.00 3 0 1 1 1 0 0
..........................................................CATTACTACTTTTGGTACGCG.............................................................................................. 21 1 1 3.00 3 1 1 1 0 0 0
..........................................................CATTATTACTTTTGGTACTCG.............................................................................................. 21 1 1 3.00 3 0 2 0 0 1 0
................................................................................................CGTACCGTGAGTAGTAATGCG........................................................ 21 1 1 3.00 3 2 1 0 0 0 0
...............................................................................................TCGTACCTTGAGTAATAATGCG........................................................ 22 1 1 3.00 3 2 0 0 1 0 0
.......................................................ATTCATTATTACTTTTGGTACGCG.............................................................................................. 24 3 1 3.00 3 3 0 0 0 0 0
............................................................TTATTACTTTTGGTACGCGCA............................................................................................ 21 1 1 3.00 3 0 0 0 0 3 0
..........................................................TATTATTACTTTTGGTACGC............................................................................................... 20 1 1 3.00 3 0 0 0 0 3 0
..........................................................CATTATTGCTTTTGGTACGCG.............................................................................................. 21 1 1 3.00 3 1 1 0 1 0 0
...........................................................ATTATTACTTTTGGTACGCGC............................................................................................. 21 0 1 3.00 3 1 0 0 0 2 0
..........................................................CATTATTACTTTTGGTACGCCA............................................................................................. 22 2 3 2.33 7 0 3 4 0 0 0
................................................................................................CGTACCGTGAGTGATAATGCG........................................................ 21 1 1 2.00 2 2 0 0 0 0 0
.........................................................ACATTATTACTTTTGGTACGCGT............................................................................................. 23 1 1 2.00 2 1 0 1 0 0 0
...............................................................................................TCGTACCGTGAGTATTAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCGCACCGTGAGTAATAATGCGA....................................................... 23 2 1 2.00 2 0 2 0 0 0 0
...............................................................................................TCGTACCGTGAGTAGTAATGC......................................................... 21 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................TTGTACCGTGAGTAATAATGCGA....................................................... 23 2 1 2.00 2 1 0 0 0 0 1
..........................................................CATTATTACTTTTGGTACGCGAT............................................................................................ 23 1 1 2.00 2 0 1 0 0 1 0
............................................................................................ATTTCGTACCGTGAGTAATAATGCA........................................................ 25 3 1 2.00 2 1 0 0 1 0 0
.............................................................TATTACTTTTGGTACGCGCAT........................................................................................... 21 2 1 2.00 2 0 0 0 0 2 0
..........................................................CATTATTACTTTTGGTACGCGGT............................................................................................ 23 1 1 2.00 2 0 0 0 0 2 0
................................................................................................CGTACCTTGAGTAATAATGCG........................................................ 21 1 1 2.00 2 1 0 0 0 0 1
..........................................................CATTATTACCTTTGGTACG................................................................................................ 19 1 1 2.00 2 1 0 1 0 0 0
..........................................................CATTATTACTTTTGGTACGCGGAC........................................................................................... 24 3 1 2.00 2 0 0 0 0 2 0
...............................................................................................TCGTACCGTGAGTAATAATGGG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................GCGTACCGTGAGTAATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................TTATTACTTTTGGTACGCGCT............................................................................................ 21 0 1 2.00 2 0 0 0 0 1 1
...............................................................................................TCGTACCGTGAGTAATA............................................................. 17 0 1 2.00 2 1 0 0 0 1 0
................................................................................................CGTACCGTGAGTAATAATCCGA....................................................... 22 2 1 2.00 2 0 0 0 0 2 0
................................................................................................CGTACCGTGAGTAATTATGCG........................................................ 21 1 1 2.00 2 2 0 0 0 0 0
................................................................................................CGTACCGTGCGTAATAATGCGT....................................................... 22 2 1 2.00 2 0 0 0 0 1 1
.............................................................................................TTTAGTACCGTGAGTAATAATGCG........................................................ 24 3 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGCACGCGA............................................................................................. 22 2 1 2.00 2 0 1 0 0 1 0
...............................................................................................TCGTACCGTGAGAAATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTCGTACGCGA............................................................................................. 22 2 1 2.00 2 1 0 0 0 1 0
................................................................................................CGTACCGTGCGTAATAATGCG........................................................ 21 1 1 2.00 2 0 0 0 0 2 0
...............................................................................................TCGTACCGTGAGTAATAATGCAT....................................................... 23 2 1 2.00 2 1 1 0 0 0 0
............................................................TTATTACTTTTGGTACGCG.............................................................................................. 19 0 1 2.00 2 0 0 1 1 0 0
.................................................................................................GTACCGTGAGTCATAATGCG........................................................ 20 1 1 2.00 2 0 0 0 0 2 0
..........................................................CATTATTATTTTTGGTACGCGT............................................................................................. 22 2 2 2.00 4 0 0 0 0 4 0
..............................................................................................CTCGTACCGTGAGCAATAATGC......................................................... 22 1 1 2.00 2 1 0 0 0 1 0
................................................................................................CGTACCGTGAGTAATAAT........................................................... 18 0 1 2.00 2 0 1 1 0 0 0
..........................................................AATTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 2.00 2 0 0 1 0 1 0
...............................................................................................ACGTACCGTGAGTAATAATGCGA....................................................... 23 2 1 2.00 2 1 0 0 0 1 0
.....................................................................................................................CTGTCGGCAGCCCAGCACC..................................... 19 0 1 2.00 2 1 0 1 0 0 0
.................................................................................................GTACCGTGAGTAATAATGA......................................................... 19 1 1 2.00 2 0 0 0 1 1 0
..................................................................................................TACCGTGAGTAATAATGCGTT...................................................... 21 1 1 2.00 2 0 0 0 0 2 0
..........................................................CATTATTCCTTTTGGTACGCGC............................................................................................. 22 1 1 2.00 2 0 0 0 0 2 0
.............................................................................................ATTCGTACCGTGAGTAATAATGA......................................................... 23 2 1 2.00 2 0 0 0 2 0 0
.................................................................................................GTACCGTGAGTAATAATGCAA....................................................... 21 2 1 2.00 2 0 0 0 0 2 0
..........................................................CATAATTACTTTTGGTACGCG.............................................................................................. 21 1 1 2.00 2 1 0 0 0 0 1
...........................................................ATTATTACTTTTGGTACGTG.............................................................................................. 20 1 1 2.00 2 0 0 0 0 2 0
...............................................................................................TCGTATCGTGAGTAATAATG.......................................................... 20 1 1 2.00 2 0 1 0 0 1 0
................................................................................................CGTACCATGAGTAATAATGCG........................................................ 21 1 1 2.00 2 1 0 0 1 0 0
.........................................................ACATTATTACTTTTGGTACA................................................................................................ 20 1 1 2.00 2 0 0 0 0 2 0
................................................................................................CGTACCGTGAGTAATAATGCGGA...................................................... 23 2 1 2.00 2 0 0 0 2 0 0
...............................................................................................TCGTACCGTGACTAATAATGCG........................................................ 22 1 1 2.00 2 0 0 0 2 0 0
..........................................................CATTATTACTTTTGGCACGCGT............................................................................................. 22 2 1 2.00 2 0 0 0 0 2 0
..........................................................CATTATTACTTTAGGTACGCG.............................................................................................. 21 1 1 2.00 2 1 0 0 1 0 0
..........................................................CATTATTACTTATGGTACGCG.............................................................................................. 21 1 1 2.00 2 0 0 0 0 2 0
...............................................................................CTGTGACACTTCAAACT............................................................................. 17 0 1 2.00 2 0 0 1 1 0 0
................................................................................................CGTGCCGTGAGTAATAATGCG........................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGTGA............................................................................................. 22 2 1 2.00 2 1 1 0 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCGAT...................................................... 24 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................TCGGACCGTGAGTAATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGCGAG............................................................................................ 23 2 1 2.00 2 0 2 0 0 0 0
...............................................................................................TCGAACCGTGAGTAATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCGTACCGTGAGTGATAATGC......................................................... 21 1 1 2.00 2 0 1 0 1 0 0
................................................................................................CGTACCGTGAGTAGTAATGCGA....................................................... 22 2 1 2.00 2 1 0 0 0 1 0
................................................................................................CGTACCGTGAGTAATAGTGCG........................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................CACTATTACTTTTGGTACGCGA............................................................................................. 22 2 1 2.00 2 0 1 1 0 0 0
..........................................................GATTATTACTTTTGGTACGCG.............................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGTCCGCG.............................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
..........................................................CATTATTACTTTTGGTACGT............................................................................................... 20 1 1 2.00 2 0 0 0 0 2 0
.........................................................CCATTATTACTTTTGGTACGCG.............................................................................................. 22 1 1 2.00 2 0 0 0 2 0 0
.............................................................................................ATTCGTACCGTGAGTAATAATGCGA....................................................... 25 2 1 2.00 2 0 0 0 2 0 0
..............................................................ATTACTTTTGGTACGCG.............................................................................................. 17 0 1 2.00 2 0 0 0 0 2 0
................................................................................................CGTACCGTGAGTAATAATTCGA....................................................... 22 2 1 2.00 2 0 0 0 0 2 0
...............................................................................................TCGTACCGTGAGTAATAATGCGTA...................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGCGCGAC.......................................................................................... 25 3 1 2.00 2 0 0 0 0 2 0
...............................................................................................TCGTACCGTCAGTAATAATGCG........................................................ 22 1 1 2.00 2 0 0 0 1 1 0
.............................................................................................................ATAATGCGCTGTCGGCAGATTA.......................................... 22 3 1 2.00 2 2 0 0 0 0 0
..........................................................CTTTATTACTTTTGGTACGCGA............................................................................................. 22 2 1 2.00 2 0 1 1 0 0 0
...........................................................ATTATTACTTTTTGTACGCG.............................................................................................. 20 1 1 2.00 2 0 1 0 0 1 0
...............................................................................................TCGTACCGAGAGTAATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGGG.............................................................................................. 21 1 1 2.00 2 0 1 1 0 0 0
................................................................................................CGTACCGTGAGTACTAATGCG........................................................ 21 1 1 2.00 2 0 0 1 0 0 1
..........................................................CATTCTTACTTTTGGTACGCG.............................................................................................. 21 1 1 2.00 2 0 1 0 0 1 0
................................................................................................CGTACCGTGAGTAATAATGCGC....................................................... 22 0 1 2.00 2 1 1 0 0 0 0
............................................................................................ATTTCGTACCGTGAGTAATAATGC......................................................... 24 2 1 2.00 2 1 0 0 1 0 0
................................................................................................CGTACCGTGAGTAATAATCCG........................................................ 21 1 1 2.00 2 0 0 0 0 0 2
...............................................................................................TCGTACCGTGAGTTATAATGCG........................................................ 22 1 1 2.00 2 2 0 0 0 0 0
................................................................................................CGTACCGTGTGTAATAATGCG........................................................ 21 1 1 2.00 2 1 0 0 1 0 0
...........................................................ATTATTACTTTTGGTACGCA.............................................................................................. 20 1 1 2.00 2 0 1 1 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCGGC...................................................... 24 2 1 1.00 1 0 0 0 1 0 0
................................................................................................CGTACCGTGAGTAATAATGCGTTA..................................................... 24 2 1 1.00 1 0 1 0 0 0 0
........................................................AACATTATTACTTTTGGTACGCGA............................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0
..........................................................CATTATTACTATTGCTACGCG.............................................................................................. 21 2 1 1.00 1 0 0 0 0 0 1
................................................................................................CGTACCGTGAGTAATAATGAGG....................................................... 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................CGTACCGTGAGTAATCATGCGT....................................................... 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................CGTACCGTGAGGAATAATGC......................................................... 20 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................TCGTACTGTGAGTAATAATG.......................................................... 20 1 3 1.00 3 2 0 0 1 0 0
................................................................................................CGTACCGTAAGTAATAATGCG........................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGCAA............................................................................................. 22 2 2 1.00 2 0 0 0 1 1 0
.............................................................TATTACTTTTGGTACGCG.............................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0
................................................................................................CGTACCGTGAGTTATAATGCG........................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................CATTATTACATTTGGTACGCG.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................CATTATTACTTTTCGTACGCG.............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................CATGATTACTTTTGGTACGCG.............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
..........................................................CATTATTACTTTTGGTACGCGTGG........................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TAATCGTACCGTGAGTAATAATGCG........................................................ 25 2 1 1.00 1 1 0 0 0 0 0
................................................................................................CGTACCGTGAGTAATAATGCGGTGCGGG................................................. 28 3 1 1.00 1 1 0 0 0 0 0
..........................................................CATTATTACTTTTGGAACGCGT............................................................................................. 22 2 2 1.00 2 1 0 0 0 1 0
..........................................................CATTATAACTTTTGGTACGCG.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................TCGTAGCGTGAGTAATAATGCG........................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................CCGTACCGTGAGTAATAATGCGA....................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................CTGTCGGCAGCCCAGCAC...................................... 18 0 1 1.00 1 1 0 0 0 0 0
..........................................................CATTATTACTTTTGGTACGTGC............................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0
..........................................................CATTATTACTATTGGTACGC............................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0
.............................................................................................TTACGTACCGTGAGTAATAATGCG........................................................ 24 3 1 1.00 1 0 0 0 1 0 0
..........................................................CATTATTCCTTTTGGTACGCGA............................................................................................. 22 2 1 1.00 1 0 0 0 0 1 0
................................................................................................CGTACCGTGAGTAATAATGCGTTT..................................................... 24 2 1 1.00 1 0 0 0 1 0 0
..........................................................CATTATTACTTTTGGTACACGA............................................................................................. 22 2 1 1.00 1 0 0 0 0 1 0
....................................................................................................CCGTGAGTAATAATGCG........................................................ 17 0 1 1.00 1 0 0 0 1 0 0
..........................................................CATTATTACCTTTGGTACGCA.............................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
......................................................GGGACATTATTACTTTTGGTACGCGA............................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0
............................................................................................ATTTCGTACCGTGAGTAATAATG.......................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................CTCATACCGTGAGTAATAATG.......................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCGTACCGTGAGTAATAATGCGAC...................................................... 24 2 1 1.00 1 0 0 0 0 1 0
...............................................................................................TCGTTCCGTGAGTAATAATGTG........................................................ 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................GCACCGTGAGTAATAATGCG........................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................CGATCCATTATTACTTTTGGTACGCG.............................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

GGGTGGCCGCAGGGACGGGTCCGTCGGACCCCTGTGTCGCGAGCGCGACCGCTGCCCTGTAATAATGAAAACCATGCGCGACACTGTGAAGTTTGAGCATGGCACTCATTATTACGCGACAGCCGTCGGGTCGTGGCTCTCGTGCCGCGCCTGGAGCCGACCTTGGTGGGAGC

*****************************************..((((.((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..)))))).))))....*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR1274763

ovary
SRR066810

testes
...................................................................................................................GCGGCAGCCGTCGGGTCGT....................................... 19 1 1 2.00 2 1 1 0
...............................................................................................AGCATGGCACTCATTATTACGC........................................................ 22 0 1 1.00 1 0 1 0
............................................................................................TTGAGCATGGCACTCATTATTAC.......................................................... 23 0 1 1.00 1 1 0 0
.............................................................................................TGAGCATGGCACTCATTATTA........................................................... 21 0 1 1.00 1 1 0 0
...................................................................................................................GCGACAGTCGTCGGGTCGCG...................................... 20 2 14 0.07 1 0 0 1
..................................................................................................................CGCGACAGTCGTCGGGTC......................................... 18 1 18 0.06 1 1 0 0

Generated: 09/01/2015 at 11:22 AM