ID:ssc-mir-1224 |
Coordinate:chr13:131580811-131580918 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -59.4 | -59.4 | -59.3 |
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AACGCGGGCCAGGCCGGTGACAGCAACAGTGAAGGCAGCGACCACGACTACCTACCCTTGGTGAGGACTCGGGAGGTGGAGGGTGGCGCTGCCAGGGCCAGGGCACTGTCTCAGCTCGCTTCTCCCCCCACCTCCTCTCTCCTCAGGTGCGGTTGCAGGAGGCACCTGGCTCCTTCCGCCTGGACGCGCCCTTCTGCGCGGCTGTGCG
***********************************..((((((.((.((.((.......))((((((...(((((((((.(((.((((..((..(((.(((....))).))).)).))))...))).)))))))))...)))))))))).)))))).((((........))))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139075 testes |
SRR066809 ovary |
SRR139076 testes |
SRR066810 testes |
SRR1274763 ovary |
|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................GTGAGGACTCGGGAGGTGGAG............................................................................................................................... | 21 | 0 | 1 | 10.00 | 10 | 9 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGT.............................................................................................................................. | 22 | 1 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGT............................................................................................................................ | 24 | 0 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGG............................................................................................................................. | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGA................................................................................................................................ | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAA............................................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAAA.............................................................................................................................. | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGG................................................................................................................................. | 19 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTAT.......................................................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTTT.......................................................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTA........................................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTT........................................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTTA.......................................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGA.............................................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGA............................................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGTAA.......................................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGAA........................................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAAT.............................................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGG.............................................................................................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGGGAT........................................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGT................................................................................................................................. | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTGGGGAGGTGGA................................................................................................................................ | 20 | 1 | 5 | 0.60 | 3 | 0 | 1 | 0 | 2 | 0 |
| ............................................................GTGAGGACTGGGGAGGTGGAGG.............................................................................................................................. | 22 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................GTGAGGACTGGGGAGGTGGAGGG............................................................................................................................. | 23 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGA................................................................................................................................. | 19 | 1 | 4 | 0.50 | 2 | 0 | 1 | 0 | 0 | 1 |
| ............................................................GTGAGGACTGGGGAGGTGGAG............................................................................................................................... | 21 | 1 | 5 | 0.40 | 2 | 0 | 1 | 0 | 1 | 0 |
| ............................................................GTGAGGACTCGGGAGGTGGAGAAA............................................................................................................................ | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................GTGAGGACTGGGGAGGTGGAGT.............................................................................................................................. | 22 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 |
| AACGCGGACCAGGCCAGT.............................................................................................................................................................................................. | 18 | 2 | 20 | 0.15 | 3 | 1 | 2 | 0 | 0 | 0 |
| .ACGCGGACCAGGCCAGTGA............................................................................................................................................................................................ | 19 | 2 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 |
|
TTGCGCCCGGTCCGGCCACTGTCGTTGTCACTTCCGTCGCTGGTGCTGATGGATGGGAACCACTCCTGAGCCCTCCACCTCCCACCGCGACGGTCCCGGTCCCGTGACAGAGTCGAGCGAAGAGGGGGGTGGAGGAGAGAGGAGTCCACGCCAACGTCCTCCGTGGACCGAGGAAGGCGGACCTGCGCGGGAAGACGCGCCGACACGC
***********************************..((((((.((.((.((.......))((((((...(((((((((.(((.((((..((..(((.(((....))).))).)).))))...))).)))))))))...)))))))))).)))))).((((........))))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 11:26 AM