ID:

ssc-mir-103-2

 Coordinate:

chr17:36149787-36149866 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-31.4 -31.4 -31.4
mature

  1. ssc-mir-103-1  chr16:59912666-59912688 +
  2. ssc-mir-103-2  chr17:36149798-36149820 -
star

Sense Strand Reads

TGGGCGGAGGAATGCCCACCCTGCTCCCCCTCCACTGCAGCAGAGCTCTTTGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACTAAGAACGGCCTTCCCTTGGGGGTCCAGTTGGTGCAGCTTTCTAGCTTGTCCCTA

********************************************..((((.((.(((((((((.((.(((((((((((((((.......))))....))))))))))).)))))..)))))).)).))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR139076

testes		 SRR066810

testes		 SRR1274763

ovary		 SRR1274764

testes
................................................................................................AGCAGCATTGTACAGGGCTATGA............................................................. 23 0 2 35176.00 70352 38808 11115 5724 9540 3294 1871
................................................................................................AGCAGCATTGTACAGGGCTAT............................................................... 21 0 3 18632.00 55896 47123 451 7042 435 451 394
................................................................................................AGCAGCATTGTACAGGGCTATG.............................................................. 22 0 2 10495.00 20990 15327 1216 2281 1076 625 465
................................................................................................AGCAGCATTGTACAGGGCTATGT............................................................. 23 1 2 4698.50 9397 4732 1177 966 1189 605 728
................................................................................................AGCAGCATTGTACAGGGCTATGAT............................................................ 24 1 2 2028.00 4056 1213 1190 318 1118 102 115
................................................................................................AGCAGCATTGTACAGGGCTATGAA............................................................ 24 0 2 1197.50 2395 579 881 109 725 64 37
................................................................................................AGCAGCATTGTACAGGGCTA................................................................ 20 0 3 1099.67 3299 2704 44 298 27 142 84
................................................................................................AGCAGCATTGTACAGGGCTATT.............................................................. 22 1 3 898.33 2695 1967 41 446 63 69 109
................................................................................................AGCAGCATTGTACAGGGCTATGAAT........................................................... 25 1 2 713.00 1426 5 730 4 668 15 4
................................................................................................AGCAGCATTGTACAGGGCTATA.............................................................. 22 1 3 647.33 1942 1596 30 238 15 32 31
................................................................................................AGCAGCATTGTACAGGGCTATGAAA........................................................... 25 0 1 358.00 358 29 143 6 157 8 15
................................................................................................AGCAGCATTGTACAGGGCTAA............................................................... 21 1 3 349.00 1047 889 3 142 6 5 2
................................................................................................AGCAGCATTGTACAGGGCTATAA............................................................. 23 1 3 289.00 867 696 15 98 10 32 16
.................................................................................................GCAGCATTGTACAGGGCTATGA............................................................. 22 0 2 261.50 523 413 36 36 36 2 0
..................................................................................................CAGCATTGTACAGGGCTATGA............................................................. 21 0 2 246.50 493 247 119 19 73 30 5
................................................................................................AGCAGCATTGTACAGGGCTATGGAAC.......................................................... 26 2 1 230.00 230 161 0 69 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTT............................................................ 24 2 2 176.00 352 151 32 34 21 39 75
................................................................................................AGCAGCATTGTACAGGGCTATGAC............................................................ 24 1 2 172.50 345 12 180 6 145 1 1
................................................................................................AGCAGCATTGTACAGGGCT................................................................. 19 0 3 117.00 351 148 30 13 23 70 67
................................................................................................AGCAGCATTGTACAGGGCTATGAAC........................................................... 25 1 2 116.00 232 54 93 21 63 1 0
................................................................................................AGCAGCATTGTACAGGGCTATAT............................................................. 23 2 4 108.75 435 344 6 77 0 7 1
................................................................................................AGCAGCATTGTACAGGGCTATGC............................................................. 23 1 2 104.00 208 122 18 19 21 16 12
...............................................................................................CAGCAGCATTGTACAGGGCTATGA............................................................. 24 1 2 101.00 202 35 91 6 70 0 0
................................................................................................AGCAGCATTGTACAGGGCTATTA............................................................. 23 1 3 93.67 281 239 5 34 2 1 0
................................................................................................AGCAGCATTGTACAGGGCTATTT............................................................. 23 2 3 89.33 268 186 10 64 6 0 2
................................................................................................AGCAGTATTGTACAGGGCTATGA............................................................. 23 1 2 80.50 161 135 3 19 3 1 0
................................................................................................AGCAGCATTGTACCGGGCTATGA............................................................. 23 1 2 79.50 159 130 3 21 2 2 1
................................................................................................AGCAGCATTGTACAGGGCTATGTA............................................................ 24 1 2 73.00 146 67 16 18 19 14 12
................................................................................................AGCAGCATTGTACAGGGC.................................................................. 18 0 3 68.67 206 98 28 6 25 26 23
................................................................................................AGCAGCATTGTACAGGGCTT................................................................ 20 1 5 63.40 317 276 3 21 6 5 6
.................................................................................................GCAGCATTGTACAGGGCTAT............................................................... 20 0 3 61.33 184 164 0 17 3 0 0
................................................................................................AGCAGCCTTGTACAGGGCTATGA............................................................. 23 1 2 61.00 122 90 4 25 3 0 0
...................................................................................................AGCATTGTACAGGGCTATGA............................................................. 20 0 2 57.00 114 96 8 8 1 0 1
................................................................................................AGCAGCATTGTATAGGGCTATGA............................................................. 23 1 2 57.00 114 88 7 8 8 2 1
................................................................................................AGCAGCATTGTACCGGGCTAT............................................................... 21 1 3 53.33 160 129 0 31 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAGAAC.......................................................... 26 3 2 51.50 103 80 0 23 0 0 0
................................................................................................AGTAGCATTGTACAGGGCTATGA............................................................. 23 1 2 51.50 103 78 9 9 7 0 0
................................................................................................AGCAGCATTGGACAGGGCTATGA............................................................. 23 1 2 51.00 102 88 3 10 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTCT............................................................... 21 1 3 50.33 151 104 0 46 0 1 0
................................................................................................AGCAGCATTGTACAGGG................................................................... 17 0 4 48.50 194 148 23 9 14 0 0
................................................................................................AGCAGCATTGTACAGGGCTTT............................................................... 21 1 3 47.33 142 122 0 13 2 2 3
................................................................................................AGCAGCATTGTACAGGGCTAAA.............................................................. 22 2 3 47.33 142 123 2 14 0 1 2
................................................................................................AGCAGCATTGGACAGGGCTAT............................................................... 21 1 3 47.00 141 136 0 5 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATTGAAC.......................................................... 26 3 2 46.00 92 73 0 19 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAGAAC......................................................... 27 3 3 45.00 135 97 0 38 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAAAC.......................................................... 26 1 1 43.00 43 20 8 9 6 0 0
................................................................................................AGCAGCATTGTACAGGGCTCTGA............................................................. 23 1 2 42.50 85 62 2 21 0 0 0
................................................................................................AGCAGTATTGTACAGGGCTAT............................................................... 21 1 3 42.00 126 109 0 17 0 0 0
................................................................................................AGCAGCCTTGTACAGGGCTAT............................................................... 21 1 3 42.00 126 103 0 23 0 0 0
................................................................................................AGCAGCATTGTACATGGCTATGA............................................................. 23 1 2 41.50 83 64 6 7 5 0 1
................................................................................................AGCAGCATTGTACAGGGCTATGATT........................................................... 25 2 2 38.00 76 7 17 11 19 12 10
................................................................................................AGCAGCATTGTACAGGGCTATGAG............................................................ 24 1 2 36.50 73 32 22 5 8 3 3
................................................................................................AGCAGCATTGTACAGGGCTATGAGAC.......................................................... 26 2 1 36.00 36 24 1 10 1 0 0
................................................................................................AGCAGCATTGTATAGGGCTAT............................................................... 21 1 3 36.00 108 93 2 13 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGG............................................................. 23 1 2 34.00 68 48 4 3 7 4 2
...........................................................AGCTTCTTTACAGTGCTGCCTTG.................................................................................................. 23 0 1 33.00 33 4 14 0 14 1 0
................................................................................................AGCCGCATTGTACAGGGCTAT............................................................... 21 1 3 33.00 99 88 0 11 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGATA........................................................... 25 1 1 33.00 33 7 9 1 11 1 4
................................................................................................AGCAGCATTGTACAGG.................................................................... 16 0 5 32.20 161 142 2 13 4 0 0
................................................................................................AGCAGCATTGCACAGGGCTATGA............................................................. 23 1 2 32.00 64 42 8 9 3 1 1
................................................................................................AGCCGCATTGTACAGGGCTATGA............................................................. 23 1 2 29.50 59 43 0 14 0 1 1
................................................................................................GGCAGCATTGTACAGGGCTATGA............................................................. 23 1 2 27.00 54 35 15 0 3 1 0
................................................................................................AGCAGCATTGTACATGGCTAT............................................................... 21 1 3 26.33 79 66 1 11 1 0 0
.......................................................................................................................AAGAACTAAGAACGGCCTTCC........................................ 21 0 1 26.00 26 3 0 16 4 1 2
................................................................................................AGCAGCATTGTACAGGGCTATGAGA........................................................... 25 1 1 26.00 26 6 11 2 6 1 0
................................................................................................AGCGGCATTGTACAGGGCTATGA............................................................. 23 1 2 26.00 52 36 5 7 3 1 0
................................................................................................AGCAGCATTGTACAGGGCTATGAAAT.......................................................... 26 1 1 26.00 26 0 18 1 7 0 0
................................................................................................ATCAGCATTGTACAGGGCTATGA............................................................. 23 1 2 25.50 51 34 5 9 3 0 0
.................................................................................................GCAGCATTGTACAGGGCTATG.............................................................. 21 0 2 24.50 49 40 5 3 0 1 0
................................................................................................AGTAGCATTGTACAGGGCTAT............................................................... 21 1 3 24.33 73 63 0 10 0 0 0
...........................................................AGCTTCTTTACAGTGCTGCCTTGT................................................................................................. 24 0 1 24.00 24 5 9 1 9 0 0
.................................................................................................GCAGCATTGTACAGGGCTATGT............................................................. 22 1 2 22.50 45 38 4 2 1 0 0
................................................................................................AGCAGTATTGTACAGGGCTATG.............................................................. 22 1 2 22.50 45 43 0 2 0 0 0
................................................................................................AGCAGCATTGCACAGGGCTAT............................................................... 21 1 3 22.33 67 54 0 10 2 1 0
................................................................................................AGCAGCATTGTACAGGGCTAC............................................................... 21 1 3 22.33 67 51 0 15 1 0 0
................................................................................................AGCAGCATTGTACAGGGTTATGA............................................................. 23 1 2 22.00 44 39 1 3 1 0 0
................................................................................................AGCAGCATTGGACAGGGCTATG.............................................................. 22 1 2 21.50 43 34 0 8 1 0 0
..................................................................................................CAGCATTGTACAGGGCTATG.............................................................. 20 0 2 21.50 43 26 10 3 2 2 0
..................................................................................................CAGCATTGTACAGGGCTATGAA............................................................ 22 0 2 21.50 43 5 27 0 11 0 0
................................................................................................AGCAGCATTGTCCAGGGCTATGA............................................................. 23 1 2 21.00 42 28 4 10 0 0 0
................................................................................................AGCAGCATTGTATAGGGCTATG.............................................................. 22 1 2 20.50 41 30 1 8 1 0 1
................................................................................................CGCAGCATTGTACAGGGCTATGA............................................................. 23 1 2 20.50 41 39 1 0 1 0 0
................................................................................................AGCAGCCTTGTACAGGGCTATG.............................................................. 22 1 2 20.50 41 34 0 7 0 0 0
................................................................................................AGCAGCATTGTCCAGGGCTAT............................................................... 21 1 3 20.33 61 51 0 10 0 0 0
................................................................................................AGCAGCATTGTACCGGGCTATG.............................................................. 22 1 2 20.00 40 27 0 12 0 1 0
................................................................................................CGCAGCATTGTACAGGGCTAT............................................................... 21 1 3 20.00 60 59 1 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTAG............................................................... 21 1 3 19.67 59 52 1 5 1 0 0
................................................................................................AGCAGCATTGTACGGGGCTATGA............................................................. 23 1 2 19.50 39 19 10 7 3 0 0
................................................................................................AGCAGCATTTTACAGGGCTATGA............................................................. 23 1 2 19.50 39 35 2 1 1 0 0
................................................................................................AGCAGCATTGTGCAGGGCTATGA............................................................. 23 1 2 19.50 39 24 8 1 4 2 0
................................................................................................AGCAGCATTGTACAGGGCTATGATC........................................................... 25 2 2 19.00 38 2 23 1 12 0 0
...................................................................................................AGTATTGTACAGGGCTATGA............................................................. 20 1 2 19.00 38 35 0 3 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTAAT.............................................................. 22 2 6 18.50 111 91 0 15 1 1 3
................................................................................................AGCAGCATTGTACAGTGCTATGA............................................................. 23 1 2 18.50 37 23 4 6 4 0 0
..............................................................................................ATAGCAGCATTGTACAGGGCTATGA............................................................. 25 2 2 18.50 37 0 15 0 22 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTAAC.......................................................... 26 2 1 18.00 18 9 1 5 3 0 0
................................................................................................AGCAGCATTGTACAGTGCTAT............................................................... 21 1 3 18.00 54 42 0 12 0 0 0
................................................................................................AGCAGCATTGTACAGGGTTAT............................................................... 21 1 3 17.67 53 49 0 4 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAGC........................................................... 25 2 2 17.50 35 12 13 2 8 0 0
..................................................................................................CAGCATTGTACAGGGCTATGAT............................................................ 22 1 2 17.00 34 3 18 0 12 0 1
................................................................................................AGCAGCATTGTACAGGTCTATGA............................................................. 23 1 2 17.00 34 24 1 9 0 0 0
................................................................................................AGCCGCATTGTACAGGGCTATG.............................................................. 22 1 2 16.50 33 27 0 5 0 0 1
................................................................................................AGCAGCATTGTACATGGCTATG.............................................................. 22 1 2 16.50 33 24 0 8 1 0 0
................................................................................................AACAGCATTGTACAGGGCTATGA............................................................. 23 1 2 16.00 32 18 5 3 4 0 2
................................................................................................AGCAGCGTTGTACAGGGCTATGA............................................................. 23 1 2 15.50 31 22 3 2 4 0 0
................................................................................................AGCAGCATCGTACAGGGCTATGA............................................................. 23 1 2 15.00 30 19 4 5 2 0 0
................................................................................................AGCAGCATTGTACAGGGCTCTG.............................................................. 22 1 2 14.50 29 19 0 10 0 0 0
................................................................................................AGCATCATTGTACAGGGCTATGA............................................................. 23 1 2 14.00 28 22 1 3 1 1 0
................................................................................................GGCAGCATTGTACAGGGCTAT............................................................... 21 1 3 14.00 42 39 0 1 2 0 0
................................................................................................AGCAGCATTGTACAGGGCCATGA............................................................. 23 1 2 13.50 27 17 4 3 3 0 0
................................................................................................AGCAGCATTGTACAGGGCTCTGT............................................................. 23 2 2 13.50 27 18 0 8 1 0 0
.................................................................................................GCAGCATTGTACAGGGCTATGAT............................................................ 23 1 2 13.00 26 12 5 5 4 0 0
................................................................................................AGTAGCATTGTACAGGGCTATG.............................................................. 22 1 2 13.00 26 24 0 2 0 0 0
................................................................................................AGCAGCATTGTACAGGTCTAT............................................................... 21 1 3 13.00 39 26 0 13 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTAA........................................................... 25 1 1 13.00 13 1 3 5 3 1 0
................................................................................................AGCAGCATTGTACAGGGCTGT............................................................... 21 1 3 13.00 39 33 1 4 0 0 1
...................................................................................................AGTATTGTACAGGGCTAT............................................................... 18 1 3 12.67 38 33 0 5 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAGT........................................................... 25 2 2 12.50 25 3 13 0 6 3 0
................................................................................................AGCAGCATTGTACAGGGCTGTGA............................................................. 23 1 2 12.50 25 15 1 4 4 1 0
...............................................................................................CAGCAGCATTGTACAGGGCTATGT............................................................. 24 2 2 12.50 25 7 5 1 12 0 0
................................................................................................AGCAGCATTGTACGGGGCTAT............................................................... 21 1 3 12.33 37 29 0 7 1 0 0
...............................................................................................CAGCAGCATTGTACAGGGCTAT............................................................... 22 1 3 11.67 35 21 5 4 5 0 0
................................................................................................AGCGGCATTGTACAGGGCTAT............................................................... 21 1 3 11.67 35 33 0 2 0 0 0
................................................................................................AGCAGCACTGTACAGGGCTATGA............................................................. 23 1 2 11.50 23 14 3 4 2 0 0
................................................................................................AGCAGCATTGTACAGGCCTATGA............................................................. 23 1 2 11.50 23 16 2 2 1 0 2
................................................................................................AGCAGCATTGTACAGGGCTACGA............................................................. 23 1 2 11.50 23 16 2 4 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGGAC........................................................... 25 2 2 11.50 23 21 0 2 0 0 0
................................................................................................ATCAGCATTGTACAGGGCTAT............................................................... 21 1 3 11.33 34 26 1 6 1 0 0
................................................................................................CGCAGCATTGTACAGGGCTATG.............................................................. 22 1 2 11.00 22 22 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAAAC........................................................... 25 2 3 11.00 33 29 0 4 0 0 0
................................................................................................AGCAGCATTGTACAGCGCTATGA............................................................. 23 1 2 11.00 22 16 0 3 2 0 1
..................................................................................................CAGCATTGTACAGGGCTATGAAA........................................................... 23 0 1 11.00 11 0 4 0 5 1 1
................................................................................................AGCAGCATTGTACAGGGCTATGAAAA.......................................................... 26 1 1 11.00 11 2 3 0 6 0 0
...........................................................AGCTTCTTTACAGTGCTGCCTT................................................................................................... 22 0 1 11.00 11 0 9 0 2 0 0
................................................................................................AGCAGCATTTTACAGGGCTAT............................................................... 21 1 3 10.67 32 27 1 4 0 0 0
................................................................................................AGCAGCATTGTACAGAGCTATGA............................................................. 23 1 2 10.50 21 10 3 7 1 0 0
................................................................................................AGCAGCATTGTACCGGGCTATGT............................................................. 23 2 2 10.50 21 17 0 4 0 0 0
................................................................................................AGCAGCATTGTGCAGGGCTAT............................................................... 21 1 3 10.33 31 24 0 7 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGGGAC.......................................................... 26 3 1 10.00 10 8 0 2 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTAT........................................................... 25 2 2 10.00 20 5 1 8 4 0 2
...............................................................................................CAGCAGCATTGTACAGGGCTATG.............................................................. 23 1 2 10.00 20 9 5 2 4 0 0
................................................................................................AGCAGCATTGTACAGGGCTACG.............................................................. 22 1 2 10.00 20 14 0 5 0 1 0
................................................................................................AGCAGCATTGTACACGGCTAT............................................................... 21 1 3 9.67 29 21 0 8 0 0 0
................................................................................................AGCAGCATTATACAGGGCTATGA............................................................. 23 1 2 9.50 19 14 4 1 0 0 0
...............................................................................................CAGCAGCATTGTACAGGGCTATGAT............................................................ 25 2 2 9.50 19 0 14 0 5 0 0
................................................................................................AGCAGCATTGAACAGGGCTATGA............................................................. 23 1 2 9.50 19 11 2 3 2 1 0
................................................................................................AGCAGCATTGTACACGGCTATGA............................................................. 23 1 2 9.50 19 11 1 6 1 0 0
................................................................................................AGCAGCATTGCACAGGGCTATG.............................................................. 22 1 2 9.50 19 12 0 6 0 0 1
................................................................................................AGCAGCATTGTACAGGGCTAAGA............................................................. 23 1 2 9.50 19 11 4 2 1 0 1
................................................................................................AGCAACATTGTACAGGGCTATGA............................................................. 23 1 2 9.50 19 16 1 2 0 0 0
................................................................................................AGCAGTATTGTACAGGGCTATGT............................................................. 23 2 2 9.50 19 15 1 3 0 0 0
................................................................................................TGCAGCATTGTACAGGGCTAT............................................................... 21 1 3 9.33 28 22 0 5 1 0 0
................................................................................................AGCAGCATTGTACAGGACTAT............................................................... 21 1 3 9.33 28 24 0 2 0 1 1
................................................................................................AGCAGCATCGTACAGGGCTAT............................................................... 21 1 3 9.33 28 25 0 2 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAGAC........................................................... 25 3 3 9.33 28 21 0 7 0 0 0
................................................................................................AGCACCATTGTACAGGGCTATGA............................................................. 23 1 2 9.00 18 12 2 2 1 0 1
................................................................................................AGCAGCGTTGTACAGGGCTAT............................................................... 21 1 3 9.00 27 21 1 5 0 0 0
................................................................................................GGCAGCATTGTACAGGGCTATG.............................................................. 22 1 2 9.00 18 17 0 1 0 0 0
.................................................................................................GCAGCATTGTACAGGGCTATGAA............................................................ 23 0 2 9.00 18 9 5 0 3 1 0
................................................................................................AGCAGCATTGTACAGTGCTATG.............................................................. 22 1 2 9.00 18 17 0 1 0 0 0
...................................................................................................AGCATTGTACAGGGCTAT............................................................... 18 0 3 9.00 27 25 0 1 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATTAT............................................................ 24 2 3 8.67 26 17 0 7 1 0 1
................................................................................................AGCAGCATTGAACAGGGCTAT............................................................... 21 1 3 8.67 26 24 0 2 0 0 0
................................................................................................AGCAGCACTGTACAGGGCTAT............................................................... 21 1 3 8.67 26 21 0 4 1 0 0
..................................................................................................CAGCATTGTACAGGGCTATGT............................................................. 21 1 2 8.50 17 9 4 1 3 0 0
................................................................................................ACCAGCATTGTACAGGGCTATGA............................................................. 23 1 2 8.50 17 8 2 1 5 0 1
................................................................................................AGCAGCATTGTACAGGGCTATGTGAC.......................................................... 26 3 1 8.00 8 7 0 1 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAGA............................................................ 24 2 3 8.00 24 0 14 0 8 2 0
.......................................................................................................................AAGAACTAAGAACGGCCTTCA........................................ 21 1 1 8.00 8 0 0 8 0 0 0
................................................................................................AGCAGCATTGTACTGGGCTATGA............................................................. 23 1 2 8.00 16 10 5 1 0 0 0
................................................................................................AGCAGCATTGTACGGGGCTATG.............................................................. 22 1 2 7.50 15 13 1 0 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTACGAAC........................................................... 25 2 2 7.50 15 12 0 3 0 0 0
................................................................................................AGCAGCCTTGTACAGGGCTATGT............................................................. 23 2 2 7.50 15 10 1 2 1 0 1
................................................................................................AGCAGCATTGTACTGGGCTAT............................................................... 21 1 3 7.33 22 19 0 3 0 0 0
................................................................................................AGCGGCATTGTACAGGGCTATG.............................................................. 22 1 2 7.00 14 11 1 1 1 0 0
...........................................................AGCTTCTTTACAGTGCTGCCTTGA................................................................................................. 24 1 1 7.00 7 4 2 0 0 1 0
...................................................................................................AGCATTGTACAGGGCTATG.............................................................. 19 0 2 7.00 14 11 1 1 0 1 0
................................................................................................AGCAGCATTGTACAGGGTTATG.............................................................. 22 1 2 7.00 14 14 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTTT........................................................... 25 3 3 6.67 20 8 2 6 4 0 0
................................................................................................AGCAGCATTGTACAGGTCTATG.............................................................. 22 1 2 6.50 13 10 0 3 0 0 0
......................................................................................................ATTGTACAGGGCTATGA............................................................. 17 0 2 6.50 13 2 5 0 6 0 0
.............................................................................................ATTAGCAGCATTGTACAGGGCTATGA............................................................. 26 3 2 6.50 13 0 7 0 6 0 0
................................................................................................AGTAGCATTGTACAGGGCTATGT............................................................. 23 2 2 6.50 13 11 0 2 0 0 0
................................................................................................AGCAACATTGTACAGGGCTAT............................................................... 21 1 4 6.50 26 26 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTAAG.............................................................. 22 1 2 6.50 13 11 0 2 0 0 0
...............................................................................................CAGCAGCATTGTACAGGGCTATGAA............................................................ 25 1 2 6.50 13 0 5 0 8 0 0
................................................................................................ATCAGCATTGTACAGGGCTATG.............................................................. 22 1 2 6.50 13 10 1 1 1 0 0
................................................................................................AGCAGCATTGTACAGGGCCAT............................................................... 21 1 3 6.33 19 16 0 3 0 0 0
................................................................................................AGCAGCATTGTACAGGCCTAT............................................................... 21 1 3 6.33 19 15 0 4 0 0 0
................................................................................................AGCAGCATTGTATAGGGCTATGT............................................................. 23 2 2 6.00 12 9 0 1 1 0 1
................................................................................................AGCAGCATTGTACAGGGCTATGACA........................................................... 25 1 1 6.00 6 2 2 0 2 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGATCGAAC....................................................... 29 2 1 6.00 6 5 0 1 0 0 0
...............................................................................................AAGCAGCATTGTACAGGGCTAT............................................................... 22 0 3 6.00 18 10 2 5 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGGCAC.......................................................... 26 3 1 6.00 6 5 0 1 0 0 0
................................................................................................AGCAGCATCGTACAGGGCTATG.............................................................. 22 1 2 6.00 12 10 0 2 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAGAA.......................................................... 26 2 1 6.00 6 2 2 0 2 0 0
................................................................................................AGCAGCATTGGACAGGGCTATGT............................................................. 23 2 2 6.00 12 10 0 2 0 0 0
...........................................................AGCTTCTTTACAGTGCTGCCTTT.................................................................................................. 23 1 1 6.00 6 3 1 0 2 0 0
..................................................................................................CAGCATTGTACAGGGCTAT............................................................... 19 0 3 6.00 18 14 1 2 0 1 0
................................................................................................AGCAGCATTGTACAAGGCTATGA............................................................. 23 1 2 6.00 12 5 3 2 2 0 0
................................................................................................AGCAGCATTGTACAGGGCAA................................................................ 20 1 4 5.75 23 22 0 1 0 0 0
................................................................................................AGCATCATTGTACAGGGCTAT............................................................... 21 1 3 5.67 17 12 0 5 0 0 0
................................................................................................AGCAGCATTGTTCAGGGCTAT............................................................... 21 1 3 5.67 17 16 0 1 0 0 0
................................................................................................AGCAGCTTTGTACAGGGCTATGA............................................................. 23 1 2 5.50 11 6 1 3 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTGTG.............................................................. 22 1 2 5.50 11 6 1 1 2 0 1
................................................................................................AGCAGCATTGTGCAGGGCTATG.............................................................. 22 1 2 5.50 11 9 0 2 0 0 0
................................................................................................AGCAGCATTTTACAGGGCTATG.............................................................. 22 1 2 5.50 11 10 1 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAAGC........................................................... 25 3 4 5.50 22 17 0 5 0 0 0
................................................................................................AGCAGCATTGTACAGGGCGATGA............................................................. 23 1 2 5.50 11 9 0 2 0 0 0
..................................................................................................CAGCATTGTACAGGGCTATGAAT........................................................... 23 1 2 5.50 11 0 6 0 5 0 0
................................................................................................AGCAGCATAGTACAGGGCTATGA............................................................. 23 1 2 5.50 11 7 2 1 1 0 0
................................................................................................AGCAGTATTGTACAGGGCTATGAT............................................................ 24 2 2 5.50 11 5 1 4 1 0 0
................................................................................................TGCAGCATTGTACAGGGCTATGA............................................................. 23 1 2 5.50 11 4 2 2 3 0 0
................................................................................................AGCAGCATAGTACAGGGCTAT............................................................... 21 1 3 5.33 16 15 0 1 0 0 0
................................................................................................AGCAGGATTGTACAGGGCTAT............................................................... 21 1 3 5.33 16 13 0 3 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATTAAC........................................................... 25 2 3 5.33 16 12 2 2 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTTA............................................................... 21 2 7 5.29 37 28 1 7 0 1 0
.......................................................................................................................AAGAACTAAGAACGGCCTTCCC....................................... 22 0 1 5.00 5 1 0 1 2 1 0
................................................................................................AGCAGCATTATACAGGGCTAT............................................................... 21 1 3 5.00 15 13 0 1 0 1 0
................................................................................................AGCAGCATTGTACAGGGCTATGAAGAAC........................................................ 28 3 2 5.00 10 9 0 1 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTTTA.............................................................. 22 2 4 5.00 20 17 0 2 0 0 1
................................................................................................AGCAGCATTGTAGAGGGCTATGA............................................................. 23 1 2 5.00 10 7 1 2 0 0 0
................................................................................................ACCAGCATTGTACAGGGCTAT............................................................... 21 1 3 5.00 15 9 0 6 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGCT............................................................ 24 2 2 5.00 10 6 1 3 0 0 0
................................................................................................AGCAGCATTGTACAGGACTATG.............................................................. 22 1 2 5.00 10 9 0 1 0 0 0
...........................................................AGCTTCTTTACAGTGCTGCCT.................................................................................................... 21 0 1 5.00 5 0 3 0 2 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAG............................................................. 23 2 3 5.00 15 13 0 0 2 0 0
...............................................................................................AAGCAGCATTGTACAGGGCTATGA............................................................. 24 0 2 5.00 10 1 3 0 6 0 0
................................................................................................AGCAGCATTGTACAGGGCTATAAT............................................................ 24 2 3 5.00 15 4 1 4 3 1 2
....................................................................................................GCATTGTACAGGGCTATGA............................................................. 19 0 2 5.00 10 4 4 0 1 1 0
...................................................................................................AGTATTGTACAGGGCTATG.............................................................. 19 1 2 4.50 9 9 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGACTATGA............................................................. 23 1 2 4.50 9 7 0 0 2 0 0
...................................................................................................AGCATTGTACAGGGCTATGAT............................................................ 21 1 2 4.50 9 9 0 0 0 0 0
................................................................................................AACAGCATTGTACAGGGCTATG.............................................................. 22 1 2 4.50 9 8 0 1 0 0 0
...................................................................................................AGCATTGTACAGGGCTATGT............................................................. 20 1 2 4.50 9 6 0 2 1 0 0
................................................................................................AGCAGCATTGTACAGGGCCGTGA............................................................. 23 2 2 4.50 9 0 3 0 6 0 0
................................................................................................AGCAGCGTTGTACAGGGCTATG.............................................................. 22 1 2 4.50 9 7 0 0 2 0 0
................................................................................................AGCAGCATTGTACAAGGCTAT............................................................... 21 1 3 4.33 13 9 1 2 1 0 0
................................................................................................AACAGCATTGTACAGGGCTAT............................................................... 21 1 3 4.33 13 11 0 2 0 0 0
.................................................................................................GCAGCATTGTACAGGGCTA................................................................ 19 0 3 4.33 13 12 0 0 0 0 1
................................................................................................AGCAGCATTGTACAGCGCTAT............................................................... 21 1 3 4.00 12 8 0 4 0 0 0
................................................................................................GGCAGCATTGTACAGGGCTATGT............................................................. 23 2 2 4.00 8 7 1 0 0 0 0
.................................................................................................GCAGCATTGTACAGGGCTATA.............................................................. 21 1 3 4.00 12 6 0 6 0 0 0
................................................................................................AGAAGCATTGTACAGGGCTATGA............................................................. 23 1 2 4.00 8 3 2 2 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTAC........................................................... 25 2 2 4.00 8 0 5 1 2 0 0
................................................................................................AGCAGCATTGTTCAGGGCTATGA............................................................. 23 1 2 4.00 8 5 1 1 0 1 0
................................................................................................AGCTGCATTGTACAGGGCTATGA............................................................. 23 1 2 4.00 8 1 1 1 5 0 0
................................................................................................AGCAGCATTATACAGGGCTATG.............................................................. 22 1 2 4.00 8 6 1 1 0 0 0
.................................................................................................GCAGCATTGTACAGGGCTATT.............................................................. 21 1 3 4.00 12 8 2 2 0 0 0
................................................................................................AGCATCATTGTACAGGGCTATG.............................................................. 22 1 2 4.00 8 6 0 2 0 0 0
.......................................................................................................................AAGAACTAAGAACGGCCTTC......................................... 20 0 1 4.00 4 0 0 1 0 0 3
...............................................................................................CAGCAGCATTGTACAGGGCTATGAAT........................................................... 26 2 2 4.00 8 0 4 0 4 0 0
................................................................................................AGCAGCACTGTACAGGGCTATG.............................................................. 22 1 2 4.00 8 8 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGCGAC.......................................................... 26 3 1 4.00 4 3 0 1 0 0 0
................................................................................................AGCCGCATTGTACAGGGCTATGT............................................................. 23 2 2 4.00 8 7 0 1 0 0 0
................................................................................................AGCAGCATTGTCCAGGGCTATG.............................................................. 22 1 2 4.00 8 6 2 0 0 0 0
.................................................................................................GCAGCATTGTACAGGGCTATGAGAC.......................................................... 25 2 1 4.00 4 3 1 0 0 0 0
................................................................................................AGCACCATTGTACAGGGCTAT............................................................... 21 1 3 3.67 11 9 0 2 0 0 0
................................................................................................AGCAGCATTGTACAGGGCGAT............................................................... 21 1 3 3.67 11 11 0 0 0 0 0
................................................................................................AGCAGCACTGTACAGGGCTATGT............................................................. 23 2 2 3.50 7 2 0 2 2 1 0
................................................................................................AGCAGCATTGTACACGGCTATG.............................................................. 22 1 2 3.50 7 6 0 1 0 0 0
................................................................................................AGCAGCATTGTACAAGGCTATG.............................................................. 22 1 2 3.50 7 7 0 0 0 0 0
................................................................................................AGGAGCATTGTACAGGGCTATGA............................................................. 23 1 2 3.50 7 5 0 1 1 0 0
................................................................................................AGCAGGATTGTACAGGGCTATGA............................................................. 23 1 2 3.50 7 3 1 3 0 0 0
................................................................................................AGCAGCATTGTACAGCGCTATG.............................................................. 22 1 2 3.50 7 5 1 1 0 0 0
................................................................................................AGCACCATTGTACAGGGCTATG.............................................................. 22 1 2 3.50 7 4 0 2 1 0 0
................................................................................................ACCAGCATTGTACAGGGCTATG.............................................................. 22 1 2 3.50 7 5 0 2 0 0 0
................................................................................................AGCAGCATTGTAAAGGGCTATGA............................................................. 23 1 2 3.50 7 1 3 1 1 1 0
................................................................................................AGCAGCAATGTACAGGGCTATGA............................................................. 23 1 2 3.50 7 3 2 1 1 0 0
................................................................................................TGCAGCATTGTACAGGGCTATG.............................................................. 22 1 2 3.50 7 5 0 1 1 0 0
................................................................................................AGCAGCATTGTACAGGGATATGA............................................................. 23 1 2 3.50 7 4 1 1 1 0 0
................................................................................................AGCAGCAGTGTACAGGGCTATGA............................................................. 23 1 2 3.50 7 7 0 0 0 0 0
................................................................................................AGCAGCCTTGTACAGGGCTATGAT............................................................ 24 2 2 3.50 7 5 1 1 0 0 0
................................................................................................AGCAGCATTGTACAGGGCA................................................................. 19 1 5 3.40 17 15 0 1 0 1 0
................................................................................................AGCAGCATTGTACAGGGCTATGAAAAC......................................................... 27 2 3 3.33 10 6 1 3 0 0 0
................................................................................................AGCAGCTTTGTACAGGGCTAT............................................................... 21 1 3 3.33 10 10 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGAGCTAT............................................................... 21 1 3 3.33 10 10 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATTG............................................................. 23 2 3 3.33 10 8 1 0 0 1 0
................................................................................................AGCAGCATTGTACAG..................................................................... 15 0 8 3.13 25 22 0 3 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAAAG.......................................................... 26 0 1 3.00 3 0 2 0 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGATAG.......................................................... 26 1 1 3.00 3 0 2 0 1 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGCAAT.......................................................... 26 2 1 3.00 3 3 0 0 0 0 0
................................................................................................AGTAGCATTGTACAGGGCTATGGAAC.......................................................... 26 3 1 3.00 3 2 0 1 0 0 0
................................................................................................AGCAGCATTGAACAGGGCTATG.............................................................. 22 1 2 3.00 6 5 1 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGACCGAAC....................................................... 29 2 1 3.00 3 1 0 2 0 0 0
................................................................................................AGCAGCATTGTAGAGGGCTAT............................................................... 21 1 3 3.00 9 9 0 0 0 0 0
.....................................................................................................CATTGTACAGGGCTATGA............................................................. 18 0 2 3.00 6 0 3 0 1 2 0
................................................................................................AGCAGCCTTGTACAGGGCTATT.............................................................. 22 2 3 3.00 9 6 0 3 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGCA............................................................ 24 1 2 3.00 6 5 0 1 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGTAAT.......................................................... 26 2 1 3.00 3 0 1 0 2 0 0
....................................................................................................GCATTGTACAGGGCTATGAT............................................................ 20 1 2 3.00 6 0 1 1 4 0 0
.......................................................................................................................AAGAACTAAGAACGGCCTT.......................................... 19 0 1 3.00 3 3 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGTGCTATGT............................................................. 23 2 2 3.00 6 4 0 2 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGAATT.......................................................... 26 2 2 3.00 6 0 2 0 3 0 1
................................................................................................AGCAGCATTGTACAGGGCTATGAGTGAAC....................................................... 29 2 1 3.00 3 3 0 0 0 0 0
...............................................................................................TAGCAGCATTGTACAGGGCTATGA............................................................. 24 1 2 3.00 6 3 1 0 2 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGACAC.......................................................... 26 2 1 3.00 3 3 0 0 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTATGACT........................................................... 25 2 2 3.00 6 0 2 0 0 3 1
.......................................GCAGAGCTCTTTGTGCTTTC......................................................................................................................... 20 0 1 3.00 3 2 0 1 0 0 0
................................................................................................AGCAGCATTGTATAGGGCTA................................................................ 20 1 4 2.75 11 10 0 1 0 0 0
................................................................................................AGCAGCATTGTACAGGGCTTTT.............................................................. 22 2 4 2.75 11 8 0 3 0 0 0

Anti-sense strand reads

ACCCGCCTCCTTACGGGTGGGACGAGGGGGAGGTGACGTCGTCTCGAGAAACACGAAAGTCGAAGAAATGTCACGACGGAACATCGTAAGTCCAGTTCGTCGTAACATGTCCCGATACTTTCTTGATTCTTGCCGGAAGGGAACCCCCAGGTCAACCACGTCGAAAGATCGAACAGGGAT

**********************************************..((((.((.(((((((((.((.(((((((((((((((.......))))....))))))))))).)))))..)))))).)).))))....******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
.........................................................................................................................CTTGATTCTTGCCGG............................................ 15 0 2 0.50 1 1

Generated: 09/01/2015 at 11:30 AM