ID:

ssc-mir-103-1

 Coordinate:

chr16:59912617-59912698 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.4 -34.4 -34.4
mature

  1. ssc-mir-103-1  chr16:59912666-59912688 +
  2. ssc-mir-103-2  chr17:36149798-36149820 -
star

Sense Strand Reads

TTTTTTTTCCCCCTTTTGCTGTTAACCTTACATTTGATTAGTGAAGTTTGCTTACTGCCCTCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGAAGGCACTGAGTCCTGCTCTTCACACGAAATTGGAGTGATTGATGTATACTTATCAAAAGC

***********************************************..(((((.((((.((((((.((.(((((((((((.(((............)))))))))))))).))))))..)).)))).)))))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR139076

testes		 SRR066810

testes		 SRR1274763

ovary		 SRR1274764

testes
...................................................................................................AGCAGCATTGTACAGGGCTATGA............................................................ 23 0 2 35176.00 70352 38808 11115 5724 9540 3294 1871
...................................................................................................AGCAGCATTGTACAGGGCTAT.............................................................. 21 0 3 18632.00 55896 47123 451 7042 435 451 394
...................................................................................................AGCAGCATTGTACAGGGCTATG............................................................. 22 0 2 10495.00 20990 15327 1216 2281 1076 625 465
...................................................................................................AGCAGCATTGTACAGGGCTATGT............................................................ 23 1 2 4698.50 9397 4732 1177 966 1189 605 728
...................................................................................................AGCAGCATTGTACAGGGCTATGAT........................................................... 24 1 2 2028.00 4056 1213 1190 318 1118 102 115
...................................................................................................AGCAGCATTGTACAGGGCTATGAA........................................................... 24 0 2 1197.50 2395 579 881 109 725 64 37
...................................................................................................AGCAGCATTGTACAGGGCTA............................................................... 20 0 3 1099.67 3299 2704 44 298 27 142 84
...................................................................................................AGCAGCATTGTACAGGGCTATT............................................................. 22 1 3 898.33 2695 1967 41 446 63 69 109
...................................................................................................AGCAGCATTGTACAGGGCTATGAAT.......................................................... 25 1 2 713.00 1426 5 730 4 668 15 4
...................................................................................................AGCAGCATTGTACAGGGCTATA............................................................. 22 1 3 647.33 1942 1596 30 238 15 32 31
...................................................................................................AGCAGCATTGTACAGGGCTAA.............................................................. 21 1 3 349.00 1047 889 3 142 6 5 2
...................................................................................................AGCAGCATTGTACAGGGCTATAA............................................................ 23 1 3 289.00 867 696 15 98 10 32 16
....................................................................................................GCAGCATTGTACAGGGCTATGA............................................................ 22 0 2 261.50 523 413 36 36 36 2 0
.....................................................................................................CAGCATTGTACAGGGCTATGA............................................................ 21 0 2 246.50 493 247 119 19 73 30 5
...................................................................................................AGCAGCATTGTACAGGGCTATGTT........................................................... 24 2 2 176.00 352 151 32 34 21 39 75
...................................................................................................AGCAGCATTGTACAGGGCTATGAC........................................................... 24 1 2 172.50 345 12 180 6 145 1 1
...................................................................................................AGCAGCATTGTACAGGGCT................................................................ 19 0 3 117.00 351 148 30 13 23 70 67
...................................................................................................AGCAGCATTGTACAGGGCTATGAAC.......................................................... 25 1 2 116.00 232 54 93 21 63 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATAT............................................................ 23 2 4 108.75 435 344 6 77 0 7 1
...................................................................................................AGCAGCATTGTACAGGGCTATGC............................................................ 23 1 2 104.00 208 122 18 19 21 16 12
..................................................................................................CAGCAGCATTGTACAGGGCTATGA............................................................ 24 1 2 101.00 202 35 91 6 70 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATTA............................................................ 23 1 3 93.67 281 239 5 34 2 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATTT............................................................ 23 2 3 89.33 268 186 10 64 6 0 2
...................................................................................................AGCAGTATTGTACAGGGCTATGA............................................................ 23 1 2 80.50 161 135 3 19 3 1 0
...................................................................................................AGCAGCATTGTACCGGGCTATGA............................................................ 23 1 2 79.50 159 130 3 21 2 2 1
...................................................................................................AGCAGCATTGTACAGGGCTATGTA........................................................... 24 1 2 73.00 146 67 16 18 19 14 12
...................................................................................................AGCAGCATTGTACAGGGC................................................................. 18 0 3 68.67 206 98 28 6 25 26 23
...................................................................................................AGCAGCATTGTACAGGGCTT............................................................... 20 1 5 63.40 317 276 3 21 6 5 6
....................................................................................................GCAGCATTGTACAGGGCTAT.............................................................. 20 0 3 61.33 184 164 0 17 3 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTATGA............................................................ 23 1 2 61.00 122 90 4 25 3 0 0
......................................................................................................AGCATTGTACAGGGCTATGA............................................................ 20 0 2 57.00 114 96 8 8 1 0 1
...................................................................................................AGCAGCATTGTATAGGGCTATGA............................................................ 23 1 2 57.00 114 88 7 8 8 2 1
...................................................................................................AGCAGCATTGTACCGGGCTAT.............................................................. 21 1 3 53.33 160 129 0 31 0 0 0
...................................................................................................AGTAGCATTGTACAGGGCTATGA............................................................ 23 1 2 51.50 103 78 9 9 7 0 0
...................................................................................................AGCAGCATTGGACAGGGCTATGA............................................................ 23 1 2 51.00 102 88 3 10 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTCT.............................................................. 21 1 3 50.33 151 104 0 46 0 1 0
...................................................................................................AGCAGCATTGTACAGGG.................................................................. 17 0 4 48.50 194 148 23 9 14 0 0
...................................................................................................AGCAGCATTGTACAGGGCTAAA............................................................. 22 2 3 47.33 142 123 2 14 0 1 2
...................................................................................................AGCAGCATTGTACAGGGCTTT.............................................................. 21 1 3 47.33 142 122 0 13 2 2 3
...................................................................................................AGCAGCATTGGACAGGGCTAT.............................................................. 21 1 3 47.00 141 136 0 5 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAGAAC........................................................ 27 3 3 45.00 135 97 0 38 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTCTGA............................................................ 23 1 2 42.50 85 62 2 21 0 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTAT.............................................................. 21 1 3 42.00 126 103 0 23 0 0 0
...................................................................................................AGCAGTATTGTACAGGGCTAT.............................................................. 21 1 3 42.00 126 109 0 17 0 0 0
...................................................................................................AGCAGCATTGTACATGGCTATGA............................................................ 23 1 2 41.50 83 64 6 7 5 0 1
...................................................................................................AGCAGCATTGTACAGGGCTATGATT.......................................................... 25 2 2 38.00 76 7 17 11 19 12 10
...................................................................................................AGCAGCATTGTACAGGGCTATGAG........................................................... 24 1 2 36.50 73 32 22 5 8 3 3
...................................................................................................AGCAGCATTGTATAGGGCTAT.............................................................. 21 1 3 36.00 108 93 2 13 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGG............................................................ 23 1 2 34.00 68 48 4 3 7 4 2
...................................................................................................AGCCGCATTGTACAGGGCTAT.............................................................. 21 1 3 33.00 99 88 0 11 0 0 0
...................................................................................................AGCAGCATTGTACAGG................................................................... 16 0 5 32.20 161 142 2 13 4 0 0
...................................................................................................AGCAGCATTGCACAGGGCTATGA............................................................ 23 1 2 32.00 64 42 8 9 3 1 1
...................................................................................................AGCCGCATTGTACAGGGCTATGA............................................................ 23 1 2 29.50 59 43 0 14 0 1 1
...................................................................................................GGCAGCATTGTACAGGGCTATGA............................................................ 23 1 2 27.00 54 35 15 0 3 1 0
...................................................................................................AGCAGCATTGTACATGGCTAT.............................................................. 21 1 3 26.33 79 66 1 11 1 0 0
...................................................................................................AGCGGCATTGTACAGGGCTATGA............................................................ 23 1 2 26.00 52 36 5 7 3 1 0
...................................................................................................ATCAGCATTGTACAGGGCTATGA............................................................ 23 1 2 25.50 51 34 5 9 3 0 0
....................................................................................................GCAGCATTGTACAGGGCTATG............................................................. 21 0 2 24.50 49 40 5 3 0 1 0
...................................................................................................AGTAGCATTGTACAGGGCTAT.............................................................. 21 1 3 24.33 73 63 0 10 0 0 0
....................................................................................................GCAGCATTGTACAGGGCTATGT............................................................ 22 1 2 22.50 45 38 4 2 1 0 0
...................................................................................................AGCAGTATTGTACAGGGCTATG............................................................. 22 1 2 22.50 45 43 0 2 0 0 0
...................................................................................................AGCAGCATTGCACAGGGCTAT.............................................................. 21 1 3 22.33 67 54 0 10 2 1 0
...................................................................................................AGCAGCATTGTACAGGGCTAC.............................................................. 21 1 3 22.33 67 51 0 15 1 0 0
...................................................................................................AGCAGCATTGTACAGGGTTATGA............................................................ 23 1 2 22.00 44 39 1 3 1 0 0
.....................................................................................................CAGCATTGTACAGGGCTATG............................................................. 20 0 2 21.50 43 26 10 3 2 2 0
.....................................................................................................CAGCATTGTACAGGGCTATGAA........................................................... 22 0 2 21.50 43 5 27 0 11 0 0
...................................................................................................AGCAGCATTGGACAGGGCTATG............................................................. 22 1 2 21.50 43 34 0 8 1 0 0
...................................................................................................AGCAGCATTGTCCAGGGCTATGA............................................................ 23 1 2 21.00 42 28 4 10 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAG.......................................................... 25 0 1 21.00 21 0 11 0 10 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTATG............................................................. 22 1 2 20.50 41 34 0 7 0 0 0
...................................................................................................AGCAGCATTGTATAGGGCTATG............................................................. 22 1 2 20.50 41 30 1 8 1 0 1
...................................................................................................CGCAGCATTGTACAGGGCTATGA............................................................ 23 1 2 20.50 41 39 1 0 1 0 0
...................................................................................................AGCAGCATTGTCCAGGGCTAT.............................................................. 21 1 3 20.33 61 51 0 10 0 0 0
...................................................................................................AGCAGCATTGTACCGGGCTATG............................................................. 22 1 2 20.00 40 27 0 12 0 1 0
...................................................................................................CGCAGCATTGTACAGGGCTAT.............................................................. 21 1 3 20.00 60 59 1 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTAG.............................................................. 21 1 3 19.67 59 52 1 5 1 0 0
...................................................................................................AGCAGCATTGTGCAGGGCTATGA............................................................ 23 1 2 19.50 39 24 8 1 4 2 0
...................................................................................................AGCAGCATTTTACAGGGCTATGA............................................................ 23 1 2 19.50 39 35 2 1 1 0 0
...................................................................................................AGCAGCATTGTACGGGGCTATGA............................................................ 23 1 2 19.50 39 19 10 7 3 0 0
......................................................................................................AGTATTGTACAGGGCTATGA............................................................ 20 1 2 19.00 38 35 0 3 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGATC.......................................................... 25 2 2 19.00 38 2 23 1 12 0 0
.................................................................................................ATAGCAGCATTGTACAGGGCTATGA............................................................ 25 2 2 18.50 37 0 15 0 22 0 0
...................................................................................................AGCAGCATTGTACAGGGCTAAT............................................................. 22 2 6 18.50 111 91 0 15 1 1 3
...................................................................................................AGCAGCATTGTACAGTGCTATGA............................................................ 23 1 2 18.50 37 23 4 6 4 0 0
...................................................................................................AGCAGCATTGTACAGTGCTAT.............................................................. 21 1 3 18.00 54 42 0 12 0 0 0
...................................................................................................AGCAGCATTGTACAGGGTTAT.............................................................. 21 1 3 17.67 53 49 0 4 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAGC.......................................................... 25 2 2 17.50 35 12 13 2 8 0 0
...................................................................................................AGCAGCATTGTACAGGTCTATGA............................................................ 23 1 2 17.00 34 24 1 9 0 0 0
.....................................................................................................CAGCATTGTACAGGGCTATGAT........................................................... 22 1 2 17.00 34 3 18 0 12 0 1
...................................................................................................AGCAGCATTGTACATGGCTATG............................................................. 22 1 2 16.50 33 24 0 8 1 0 0
...................................................................................................AGCCGCATTGTACAGGGCTATG............................................................. 22 1 2 16.50 33 27 0 5 0 0 1
...................................................................................................AACAGCATTGTACAGGGCTATGA............................................................ 23 1 2 16.00 32 18 5 3 4 0 2
...................................................................................................AGCAGCGTTGTACAGGGCTATGA............................................................ 23 1 2 15.50 31 22 3 2 4 0 0
...................................................................................................AGCAGCATCGTACAGGGCTATGA............................................................ 23 1 2 15.00 30 19 4 5 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCTCTG............................................................. 22 1 2 14.50 29 19 0 10 0 0 0
...................................................................................................AGCATCATTGTACAGGGCTATGA............................................................ 23 1 2 14.00 28 22 1 3 1 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAGGAC........................................................ 27 2 1 14.00 14 10 0 4 0 0 0
...................................................................................................GGCAGCATTGTACAGGGCTAT.............................................................. 21 1 3 14.00 42 39 0 1 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCCATGA............................................................ 23 1 2 13.50 27 17 4 3 3 0 0
...................................................................................................AGCAGCATTGTACAGGGCTCTGT............................................................ 23 2 2 13.50 27 18 0 8 1 0 0
...................................................................................................AGTAGCATTGTACAGGGCTATG............................................................. 22 1 2 13.00 26 24 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTGT.............................................................. 21 1 3 13.00 39 33 1 4 0 0 1
...................................................................................................AGCAGCATTGTACAGGTCTAT.............................................................. 21 1 3 13.00 39 26 0 13 0 0 0
....................................................................................................GCAGCATTGTACAGGGCTATGAT........................................................... 23 1 2 13.00 26 12 5 5 4 0 0
......................................................................................................AGTATTGTACAGGGCTAT.............................................................. 18 1 3 12.67 38 33 0 5 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAGT.......................................................... 25 2 2 12.50 25 3 13 0 6 3 0
..................................................................................................CAGCAGCATTGTACAGGGCTATGT............................................................ 24 2 2 12.50 25 7 5 1 12 0 0
...................................................................................................AGCAGCATTGTACAGGGCTGTGA............................................................ 23 1 2 12.50 25 15 1 4 4 1 0
...................................................................................................AGCAGCATTGTACGGGGCTAT.............................................................. 21 1 3 12.33 37 29 0 7 1 0 0
..................................................................................................CAGCAGCATTGTACAGGGCTAT.............................................................. 22 1 3 11.67 35 21 5 4 5 0 0
...................................................................................................AGCGGCATTGTACAGGGCTAT.............................................................. 21 1 3 11.67 35 33 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGCCTATGA............................................................ 23 1 2 11.50 23 16 2 2 1 0 2
...................................................................................................AGCAGCATTGTACAGGGCTACGA............................................................ 23 1 2 11.50 23 16 2 4 1 0 0
...................................................................................................AGCAGCACTGTACAGGGCTATGA............................................................ 23 1 2 11.50 23 14 3 4 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGGAC.......................................................... 25 2 2 11.50 23 21 0 2 0 0 0
...................................................................................................ATCAGCATTGTACAGGGCTAT.............................................................. 21 1 3 11.33 34 26 1 6 1 0 0
...................................................................................................AGCAGCATTGTACAGCGCTATGA............................................................ 23 1 2 11.00 22 16 0 3 2 0 1
..............................................................GGCTTCTTTACAGTGCTGCCTTG................................................................................................. 23 0 1 11.00 11 3 3 0 4 0 1
...................................................................................................AGCAGCATTGTACAGGGCTATAAAC.......................................................... 25 2 3 11.00 33 29 0 4 0 0 0
...................................................................................................CGCAGCATTGTACAGGGCTATG............................................................. 22 1 2 11.00 22 22 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAGAC........................................................ 27 2 1 11.00 11 9 0 2 0 0 0
...................................................................................................AGCAGCATTTTACAGGGCTAT.............................................................. 21 1 3 10.67 32 27 1 4 0 0 0
...................................................................................................AGCAGCATTGTACAGAGCTATGA............................................................ 23 1 2 10.50 21 10 3 7 1 0 0
...................................................................................................AGCAGCATTGTACCGGGCTATGT............................................................ 23 2 2 10.50 21 17 0 4 0 0 0
...................................................................................................AGCAGCATTGTGCAGGGCTAT.............................................................. 21 1 3 10.33 31 24 0 7 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTACG............................................................. 22 1 2 10.00 20 14 0 5 0 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAT.......................................................... 25 2 2 10.00 20 5 1 8 4 0 2
...........................................AAGTTTGCTTACTGCCCTC........................................................................................................................ 19 0 1 10.00 10 2 5 0 3 0 0
..................................................................................................CAGCAGCATTGTACAGGGCTATG............................................................. 23 1 2 10.00 20 9 5 2 4 0 0
...................................................................................................AGCAGCATTGTACACGGCTAT.............................................................. 21 1 3 9.67 29 21 0 8 0 0 0
...................................................................................................AGCAGCATTGTACACGGCTATGA............................................................ 23 1 2 9.50 19 11 1 6 1 0 0
..................................................................................................CAGCAGCATTGTACAGGGCTATGAT........................................................... 25 2 2 9.50 19 0 14 0 5 0 0
...................................................................................................AGCAGCATTATACAGGGCTATGA............................................................ 23 1 2 9.50 19 14 4 1 0 0 0
...................................................................................................AGCAGCATTGAACAGGGCTATGA............................................................ 23 1 2 9.50 19 11 2 3 2 1 0
...................................................................................................AGCAGCATTGCACAGGGCTATG............................................................. 22 1 2 9.50 19 12 0 6 0 0 1
...................................................................................................AGCAACATTGTACAGGGCTATGA............................................................ 23 1 2 9.50 19 16 1 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTAAGA............................................................ 23 1 2 9.50 19 11 4 2 1 0 1
...................................................................................................AGCAGTATTGTACAGGGCTATGT............................................................ 23 2 2 9.50 19 15 1 3 0 0 0
...................................................................................................TGCAGCATTGTACAGGGCTAT.............................................................. 21 1 3 9.33 28 22 0 5 1 0 0
...................................................................................................AGCAGCATTGTACAGGACTAT.............................................................. 21 1 3 9.33 28 24 0 2 0 1 1
...................................................................................................AGCAGCATTGTACAGGGCTATAGAC.......................................................... 25 3 3 9.33 28 21 0 7 0 0 0
...................................................................................................AGCAGCATCGTACAGGGCTAT.............................................................. 21 1 3 9.33 28 25 0 2 1 0 0
....................................................................................................GCAGCATTGTACAGGGCTATGAA........................................................... 23 0 2 9.00 18 9 5 0 3 1 0
...................................................................................................GGCAGCATTGTACAGGGCTATG............................................................. 22 1 2 9.00 18 17 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGGAGC......................................................... 26 2 1 9.00 9 6 0 3 0 0 0
...................................................................................................AGCAGCGTTGTACAGGGCTAT.............................................................. 21 1 3 9.00 27 21 1 5 0 0 0
...................................................................................................AGCAGCATTGTACAGTGCTATG............................................................. 22 1 2 9.00 18 17 0 1 0 0 0
......................................................................................................AGCATTGTACAGGGCTAT.............................................................. 18 0 3 9.00 27 25 0 1 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATAGAGC......................................................... 26 3 1 9.00 9 9 0 0 0 0 0
...................................................................................................AGCACCATTGTACAGGGCTATGA............................................................ 23 1 2 9.00 18 12 2 2 1 0 1
...................................................................................................AGCAGCATTGTACAGGGCTATTAT........................................................... 24 2 3 8.67 26 17 0 7 1 0 1
...................................................................................................AGCAGCACTGTACAGGGCTAT.............................................................. 21 1 3 8.67 26 21 0 4 1 0 0
...................................................................................................AGCAGCATTGAACAGGGCTAT.............................................................. 21 1 3 8.67 26 24 0 2 0 0 0
...................................................................................................ACCAGCATTGTACAGGGCTATGA............................................................ 23 1 2 8.50 17 8 2 1 5 0 1
.....................................................................................................CAGCATTGTACAGGGCTATGT............................................................ 21 1 2 8.50 17 9 4 1 3 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGACGAC........................................................ 27 2 1 8.00 8 6 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATAGA........................................................... 24 2 3 8.00 24 0 14 0 8 2 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAGC......................................................... 26 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................AGCAGCATTGTACTGGGCTATGA............................................................ 23 1 2 8.00 16 10 5 1 0 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTATGT............................................................ 23 2 2 7.50 15 10 1 2 1 0 1
...................................................................................................AGCAGCATTGTACGGGGCTATG............................................................. 22 1 2 7.50 15 13 1 0 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTACGAAC.......................................................... 25 2 2 7.50 15 12 0 3 0 0 0
...................................................................................................AGCAGCATTGTACTGGGCTAT.............................................................. 21 1 3 7.33 22 19 0 3 0 0 0
...................................................................................................AGCAGCATTGTACAGGGTTATG............................................................. 22 1 2 7.00 14 14 0 0 0 0 0
...................................................................................................AGCGGCATTGTACAGGGCTATG............................................................. 22 1 2 7.00 14 11 1 1 1 0 0
......................................................................................................AGCATTGTACAGGGCTATG............................................................. 19 0 2 7.00 14 11 1 1 0 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTGGAC........................................................ 27 3 1 7.00 7 6 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAGAC........................................................ 27 1 1 7.00 7 2 0 5 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTTT.......................................................... 25 3 3 6.67 20 8 2 6 4 0 0
...................................................................................................AGCAGCATTGTACAGGTCTATG............................................................. 22 1 2 6.50 13 10 0 3 0 0 0
................................................................................................ATTAGCAGCATTGTACAGGGCTATGA............................................................ 26 3 2 6.50 13 0 7 0 6 0 0
...................................................................................................ATCAGCATTGTACAGGGCTATG............................................................. 22 1 2 6.50 13 10 1 1 1 0 0
...................................................................................................AGTAGCATTGTACAGGGCTATGT............................................................ 23 2 2 6.50 13 11 0 2 0 0 0
.........................................................................................................ATTGTACAGGGCTATGA............................................................ 17 0 2 6.50 13 2 5 0 6 0 0
..................................................................................................CAGCAGCATTGTACAGGGCTATGAA........................................................... 25 1 2 6.50 13 0 5 0 8 0 0
...................................................................................................AGCAACATTGTACAGGGCTAT.............................................................. 21 1 4 6.50 26 26 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTAAG............................................................. 22 1 2 6.50 13 11 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCCAT.............................................................. 21 1 3 6.33 19 16 0 3 0 0 0
...................................................................................................AGCAGCATTGTACAGGCCTAT.............................................................. 21 1 3 6.33 19 15 0 4 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGATG.......................................................... 25 1 1 6.00 6 0 1 0 1 3 1
...................................................................................................AGCAGCATTGGACAGGGCTATGT............................................................ 23 2 2 6.00 12 10 0 2 0 0 0
.....................................................................................................CAGCATTGTACAGGGCTAT.............................................................. 19 0 3 6.00 18 14 1 2 0 1 0
..................................................................................................AAGCAGCATTGTACAGGGCTAT.............................................................. 22 0 3 6.00 18 10 2 5 1 0 0
...................................................................................................AGCAGCATCGTACAGGGCTATG............................................................. 22 1 2 6.00 12 10 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAAGGCTATGA............................................................ 23 1 2 6.00 12 5 3 2 2 0 0
...................................................................................................AGCAGCATTGTATAGGGCTATGT............................................................ 23 2 2 6.00 12 9 0 1 1 0 1
...................................................................................................AGCAGCATTGTACAGGGCAA............................................................... 20 1 4 5.75 23 22 0 1 0 0 0
...................................................................................................AGCATCATTGTACAGGGCTAT.............................................................. 21 1 3 5.67 17 12 0 5 0 0 0
...................................................................................................AGCAGCATTGTTCAGGGCTAT.............................................................. 21 1 3 5.67 17 16 0 1 0 0 0
...................................................................................................AGCAGCATAGTACAGGGCTATGA............................................................ 23 1 2 5.50 11 7 2 1 1 0 0
.....................................................................................................CAGCATTGTACAGGGCTATGAAT.......................................................... 23 1 2 5.50 11 0 6 0 5 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATAAGC.......................................................... 25 3 4 5.50 22 17 0 5 0 0 0
...................................................................................................AGCAGCATTGTGCAGGGCTATG............................................................. 22 1 2 5.50 11 9 0 2 0 0 0
...................................................................................................AGCAGCTTTGTACAGGGCTATGA............................................................ 23 1 2 5.50 11 6 1 3 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCGATGA............................................................ 23 1 2 5.50 11 9 0 2 0 0 0
...................................................................................................AGCAGCATTTTACAGGGCTATG............................................................. 22 1 2 5.50 11 10 1 0 0 0 0
...................................................................................................TGCAGCATTGTACAGGGCTATGA............................................................ 23 1 2 5.50 11 4 2 2 3 0 0
...................................................................................................AGCAGCATTGTACAGGGCTGTG............................................................. 22 1 2 5.50 11 6 1 1 2 0 1
...................................................................................................AGCAGTATTGTACAGGGCTATGAT........................................................... 24 2 2 5.50 11 5 1 4 1 0 0
...................................................................................................AGCAGGATTGTACAGGGCTAT.............................................................. 21 1 3 5.33 16 13 0 3 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATTAAC.......................................................... 25 2 3 5.33 16 12 2 2 0 0 0
...................................................................................................AGCAGCATAGTACAGGGCTAT.............................................................. 21 1 3 5.33 16 15 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTTA.............................................................. 21 2 7 5.29 37 28 1 7 0 1 0
...................................................................................................AGCAGCATTATACAGGGCTAT.............................................................. 21 1 3 5.00 15 13 0 1 0 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAGC......................................................... 26 2 1 5.00 5 5 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATAAT........................................................... 24 2 3 5.00 15 4 1 4 3 1 2
...................................................................................................AGCAGCATTGTACAGGGCTATAG............................................................ 23 2 3 5.00 15 13 0 0 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGATGCC........................................................ 27 2 1 5.00 5 5 0 0 0 0 0
..................................................................................................AAGCAGCATTGTACAGGGCTATGA............................................................ 24 0 2 5.00 10 1 3 0 6 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGCT........................................................... 24 2 2 5.00 10 6 1 3 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAGAAC....................................................... 28 3 2 5.00 10 9 0 1 0 0 0
...................................................................................................AGCAGCATTGTAGAGGGCTATGA............................................................ 23 1 2 5.00 10 7 1 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGACTATG............................................................. 22 1 2 5.00 10 9 0 1 0 0 0
............................................AGTTTGCTTACTGCCCTC........................................................................................................................ 18 0 1 5.00 5 2 3 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTTTA............................................................. 22 2 4 5.00 20 17 0 2 0 0 1
.......................................................................................................GCATTGTACAGGGCTATGA............................................................ 19 0 2 5.00 10 4 4 0 1 1 0
...................................................................................................ACCAGCATTGTACAGGGCTAT.............................................................. 21 1 3 5.00 15 9 0 6 0 0 0
...................................................................................................AACAGCATTGTACAGGGCTATG............................................................. 22 1 2 4.50 9 8 0 1 0 0 0
......................................................................................................AGCATTGTACAGGGCTATGT............................................................ 20 1 2 4.50 9 6 0 2 1 0 0
...................................................................................................AGCAGCATTGTACAGGACTATGA............................................................ 23 1 2 4.50 9 7 0 0 2 0 0
...................................................................................................AGCAGCGTTGTACAGGGCTATG............................................................. 22 1 2 4.50 9 7 0 0 2 0 0
......................................................................................................AGCATTGTACAGGGCTATGAT........................................................... 21 1 2 4.50 9 9 0 0 0 0 0
......................................................................................................AGTATTGTACAGGGCTATG............................................................. 19 1 2 4.50 9 9 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCCGTGA............................................................ 23 2 2 4.50 9 0 3 0 6 0 0
...................................................................................................AGCAGCATTGTACAAGGCTAT.............................................................. 21 1 3 4.33 13 9 1 2 1 0 0
...................................................................................................AACAGCATTGTACAGGGCTAT.............................................................. 21 1 3 4.33 13 11 0 2 0 0 0
....................................................................................................GCAGCATTGTACAGGGCTA............................................................... 19 0 3 4.33 13 12 0 0 0 0 1
...................................................................................................AGCATCATTGTACAGGGCTATG............................................................. 22 1 2 4.00 8 6 0 2 0 0 0
....................................................................................................GCAGCATTGTACAGGGCTATT............................................................. 21 1 3 4.00 12 8 2 2 0 0 0
...................................................................................................AGCAGCATTGTACAGCGCTAT.............................................................. 21 1 3 4.00 12 8 0 4 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAGT......................................................... 26 1 1 4.00 4 1 0 0 1 0 2
...................................................................................................AGCAGCATTGTCCAGGGCTATG............................................................. 22 1 2 4.00 8 6 2 0 0 0 0
...................................................................................................AGCTGCATTGTACAGGGCTATGA............................................................ 23 1 2 4.00 8 1 1 1 5 0 0
....................................................................................................GCAGCATTGTACAGGGCTATA............................................................. 21 1 3 4.00 12 6 0 6 0 0 0
..................................................................................................CAGCAGCATTGTACAGGGCTATGAAT.......................................................... 26 2 2 4.00 8 0 4 0 4 0 0
...................................................................................................AGCAGCACTGTACAGGGCTATG............................................................. 22 1 2 4.00 8 8 0 0 0 0 0
...................................................................................................AGCAGCATTATACAGGGCTATG............................................................. 22 1 2 4.00 8 6 1 1 0 0 0
..............................................................GGCTTCTTTACAGTGCTGCCTTGT................................................................................................ 24 0 1 4.00 4 2 1 0 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAC.......................................................... 25 2 2 4.00 8 0 5 1 2 0 0
...................................................................................................GGCAGCATTGTACAGGGCTATGT............................................................ 23 2 2 4.00 8 7 1 0 0 0 0
...................................................................................................AGCCGCATTGTACAGGGCTATGT............................................................ 23 2 2 4.00 8 7 0 1 0 0 0
...................................................................................................AGCAGCATTGTTCAGGGCTATGA............................................................ 23 1 2 4.00 8 5 1 1 0 1 0
...................................................................................................AGAAGCATTGTACAGGGCTATGA............................................................ 23 1 2 4.00 8 3 2 2 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAGT......................................................... 26 2 1 4.00 4 0 2 0 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGACGG......................................................... 26 1 1 4.00 4 4 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCGAT.............................................................. 21 1 3 3.67 11 11 0 0 0 0 0
...................................................................................................AGCACCATTGTACAGGGCTAT.............................................................. 21 1 3 3.67 11 9 0 2 0 0 0
...................................................................................................AGCAGCATTGTAAAGGGCTATGA............................................................ 23 1 2 3.50 7 1 3 1 1 1 0
...................................................................................................AGCAGCATTGTACAGGGATATGA............................................................ 23 1 2 3.50 7 4 1 1 1 0 0
...................................................................................................AGCAGCATTGTACAAGGCTATG............................................................. 22 1 2 3.50 7 7 0 0 0 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTATGAT........................................................... 24 2 2 3.50 7 5 1 1 0 0 0
...................................................................................................AGCAGCACTGTACAGGGCTATGT............................................................ 23 2 2 3.50 7 2 0 2 2 1 0
...................................................................................................AGCAGGATTGTACAGGGCTATGA............................................................ 23 1 2 3.50 7 3 1 3 0 0 0
...................................................................................................TGCAGCATTGTACAGGGCTATG............................................................. 22 1 2 3.50 7 5 0 1 1 0 0
...................................................................................................AGCAGCATTGTACACGGCTATG............................................................. 22 1 2 3.50 7 6 0 1 0 0 0
...................................................................................................AGCAGCAATGTACAGGGCTATGA............................................................ 23 1 2 3.50 7 3 2 1 1 0 0
...................................................................................................AGCAGCAGTGTACAGGGCTATGA............................................................ 23 1 2 3.50 7 7 0 0 0 0 0
...................................................................................................AGCACCATTGTACAGGGCTATG............................................................. 22 1 2 3.50 7 4 0 2 1 0 0
...................................................................................................AGGAGCATTGTACAGGGCTATGA............................................................ 23 1 2 3.50 7 5 0 1 1 0 0
...................................................................................................ACCAGCATTGTACAGGGCTATG............................................................. 22 1 2 3.50 7 5 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGCGCTATG............................................................. 22 1 2 3.50 7 5 1 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCA................................................................ 19 1 5 3.40 17 15 0 1 0 1 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAAAC........................................................ 27 2 3 3.33 10 6 1 3 0 0 0
...................................................................................................AGCAGCTTTGTACAGGGCTAT.............................................................. 21 1 3 3.33 10 10 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATTG............................................................ 23 2 3 3.33 10 8 1 0 0 1 0
...................................................................................................AGCAGCATTGTACAGAGCTAT.............................................................. 21 1 3 3.33 10 10 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAG.................................................................... 15 0 8 3.13 25 22 0 3 0 0 0
...................................................................................................AGCAGCATTGTAGAGGGCTAT.............................................................. 21 1 3 3.00 9 9 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATCGAGC......................................................... 26 3 2 3.00 6 6 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAAGCG........................................................ 27 2 1 3.00 3 3 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGAATT......................................................... 26 2 2 3.00 6 0 2 0 3 0 1
........................................................................................................CATTGTACAGGGCTATGA............................................................ 18 0 2 3.00 6 0 3 0 1 2 0
...................................................................................................AGCAGCATTGAACAGGGCTATG............................................................. 22 1 2 3.00 6 5 1 0 0 0 0
..................................................................................................TAGCAGCATTGTACAGGGCTATGA............................................................ 24 1 2 3.00 6 3 1 0 2 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGACT.......................................................... 25 2 2 3.00 6 0 2 0 0 3 1
...................................................................................................AGCAGCATTGTACAGGGCTATGCA........................................................... 24 1 2 3.00 6 5 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAG.......................................................... 25 1 1 3.00 3 0 2 0 1 0 0
..........................................................................................................................AGGCACTGAGTCCTGCTCTTCA...................................... 22 0 1 3.00 3 2 0 1 0 0 0
.......................................................................................................GCATTGTACAGGGCTATGAT........................................................... 20 1 2 3.00 6 0 1 1 4 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGTAGA......................................................... 26 2 1 3.00 3 0 2 0 1 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATTGAGC......................................................... 26 3 1 3.00 3 3 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGTGCTATGT............................................................ 23 2 2 3.00 6 4 0 2 0 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTATT............................................................. 22 2 3 3.00 9 6 0 3 0 0 0
...................................................................................................AGCAGCATTGTATAGGGCTA............................................................... 20 1 4 2.75 11 10 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTTTT............................................................. 22 2 4 2.75 11 8 0 3 0 0 0
...................................................................................................AGCAGCCTTGTACAGGGCTA............................................................... 20 1 3 2.67 8 7 0 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTCTT............................................................. 22 2 3 2.67 8 6 0 2 0 0 0
...................................................................................................AGCAGCATTGTACAGGGGTAT.............................................................. 21 1 3 2.67 8 7 0 1 0 0 0
...................................................................................................AGCAGCATTCTACAGGGCTAT.............................................................. 21 1 3 2.67 8 7 0 1 0 0 0
...................................................................................................AGCAGCATTGTACCGGGCTA............................................................... 20 1 3 2.67 8 4 0 4 0 0 0
...................................................................................................AGCAGCATTGTACCGGGCTATT............................................................. 22 2 3 2.67 8 6 0 2 0 0 0
...................................................................................................AGCAGTATTGTACAGGGCTATT............................................................. 22 2 3 2.67 8 7 0 1 0 0 0
...................................................................................................AGCAGCATTGGACAGGGCTATGAT........................................................... 24 2 2 2.50 5 5 0 0 0 0 0
...................................................................................................AGCAGCATTGTCCAGGGCTATGT............................................................ 23 2 2 2.50 5 5 0 0 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTATGGA........................................................... 24 1 2 2.50 5 1 2 0 1 1 0
...................................................................................................AGCAGCATTGTACTGGGCTATG............................................................. 22 1 2 2.50 5 5 0 0 0 0 0
....................................................................................................GCAGCATTGTACAGGGCTATGAAT.......................................................... 24 1 2 2.50 5 0 3 0 2 0 0
...................................................................................................AGCAGCGTTGTACAGGGCTATGT............................................................ 23 2 2 2.50 5 5 0 0 0 0 0
...................................................................................................AGCAGCATGGTACAGGGCTATGA............................................................ 23 1 2 2.50 5 3 1 1 0 0 0
...................................................................................................AGCAGCATTCTACAGGGCTATG............................................................. 22 1 2 2.50 5 3 1 1 0 0 0
...................................................................................................AGCAGCATTGTACAGGGCTACGT............................................................ 23 2 2 2.50 5 4 0 1 0 0 0

Anti-sense strand reads

AAAAAAAAGGGGGAAAACGACAATTGGAATGTAAACTAATCACTTCAAACGAATGACGGGAGCCGAAGAAATGTCACGACGGAACAACGTATACCTAGTTCGTCGTAACATGTCCCGATACTTCCGTGACTCAGGACGAGAAGTGTGCTTTAACCTCACTAACTACATATGAATAGTTTTCG

*********************************************..(((((.((((.((((((.((.(((((((((((.(((............)))))))))))))).))))))..)).)))).)))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
................................................ACGAATGACAGGCGCCGAAG.................................................................................................................. 20 2 1 1.00 1 1

Generated: 09/01/2015 at 11:30 AM