ID:

ssc-mir-100

Coordinate:

chr9:54383382-54383461 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-30.4 -30.0

Sense Strand Reads

TAACATTTCATTTTCAGACACGTCAAACCCCCACACAAAAGAAGATACGGAGGCCTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGATAGTGCACACAAGCTTGTGTCTATAGGTATGTGTCTGTGGGCGATCTCACAGGCCGCGGGCTCTGCCTGTCCGTCATCACAGTCCCTCC

**************************************************..((((.....((((.(((.((((((.(((.((((((.((......)))))))).))).)))))).))).)))).....))))...********************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR066809

ovary
SRR066810

testes
SRR139076

testes
SRR1274764

testes
SRR1274763

ovary
.................................................................AACCCGTAGATCCGAACTTGTGT............................................................................................ 23 1 1 60876.00 60876 7123 26763 25383 1575 13 19
.................................................................AACCCGTAGATCCGAACTTGTG............................................................................................. 22 0 1 57239.00 57239 24073 13228 12407 5583 839 1109
.................................................................AACCCGTAGATCCGAACTTGT.............................................................................................. 21 0 1 45060.00 45060 23131 7791 5944 7060 684 450
.................................................................AACCCGTAGATCCGAACTTGTGA............................................................................................ 23 1 1 22235.00 22235 10848 5007 2747 2865 423 345
..................................................................ACCCGTAGATCCGAACTTGTGT............................................................................................ 22 1 1 5333.00 5333 18 2670 2642 3 0 0
.................................................................AACCCGTAGATCCGA.................................................................................................... 15 0 2 2231.50 4463 4348 24 1 90 0 0
.................................................................AACCCGTAGATCCGAACTTG............................................................................................... 20 0 1 2074.00 2074 791 147 138 298 327 373
.................................................................AACCCGTAGATCCGAACTTGTGAA........................................................................................... 24 2 1 833.00 833 407 136 106 113 45 26
..................................................................ACCCGTAGATCCGAACTTGTGA............................................................................................ 22 1 1 545.00 545 214 150 75 79 18 9
..................................................................ACCCGTAGATCCGAACTTGTG............................................................................................. 21 0 1 487.00 487 89 173 184 17 17 7
.................................................................AACCCGTAGATCCGAAC.................................................................................................. 17 0 1 279.00 279 248 6 4 21 0 0
.................................................................AACCCGTAGATCCGCACTTGT.............................................................................................. 21 1 1 271.00 271 219 2 0 50 0 0
.................................................................AACCCGTAGATCCGAACTT................................................................................................ 19 0 1 269.00 269 164 28 16 40 14 7
.................................................................AACCCGTAGATCCGAACTTGTA............................................................................................. 22 1 1 268.00 268 99 84 41 23 12 9
..................................................................ACCCGTAGATCCGAACTTGT.............................................................................................. 20 0 1 263.00 263 48 87 100 20 7 1
.................................................................AACCCGTAGATCCGCACTTGTG............................................................................................. 22 1 1 243.00 243 198 1 3 41 0 0
.................................................................AACCCGTAGATCCGAACTTGTGC............................................................................................ 23 0 1 238.00 238 111 46 51 30 0 0
.................................................................AACCCGTAGATCCGATCTTGTGC............................................................................................ 23 1 2 236.50 473 390 43 17 18 2 3
.................................................................AACCCGTAGATCCGAATTTGTG............................................................................................. 22 1 1 192.00 192 75 60 48 8 0 1
.................................................................AACCCGTAGATCCGAACTTGA.............................................................................................. 21 1 1 169.00 169 47 68 34 14 4 2
.................................................................AACCCGTAGATCTGAACTTGT.............................................................................................. 21 1 1 157.00 157 40 9 13 21 49 25
.................................................................AACCCGTAGATCCGAACT................................................................................................. 18 0 1 155.00 155 69 23 15 10 14 24
.................................................................AACCCGTAGATCCGAATTTGT.............................................................................................. 21 1 1 154.00 154 71 37 28 18 0 0
.................................................................AACCCGTAGATCCGAACTTGTGG............................................................................................ 23 1 2 149.00 298 57 27 16 26 95 77
.................................................................AACCCGTAGATCCGCACTTGTGA............................................................................................ 23 2 1 118.00 118 84 1 2 31 0 0
.................................................................AACCCGTAGATCCGACCTTGTG............................................................................................. 22 1 2 117.50 235 192 9 6 28 0 0
.................................................................AACCCGTAGATCTGAACTTGTG............................................................................................. 22 1 1 113.00 113 66 18 8 9 5 7
.................................................................AACCCGTAGATCCGAACTTGTGTT........................................................................................... 24 1 1 111.00 111 12 40 56 3 0 0
.................................................................AACCCGTAGATCCGACCTTGT.............................................................................................. 21 1 2 101.50 203 157 19 2 25 0 0
.................................................................AACCCGTAGATTCGAACTTGTG............................................................................................. 22 1 1 98.00 98 74 5 5 13 1 0
.....................................................................CGTAGATCCGAACTTGT.............................................................................................. 17 0 1 91.00 91 0 2 3 0 64 22
.................................................................AACCCGTAGATCCGGACTTGT.............................................................................................. 21 1 1 91.00 91 68 4 0 19 0 0
.................................................................AACCCGTAGATCCTAACTTGTG............................................................................................. 22 1 1 90.00 90 68 0 3 19 0 0
.................................................................AACCCGTAGATCCGAACTTGTT............................................................................................. 22 1 1 88.00 88 49 18 16 5 0 0
.................................................................AACCCGTAGATCCGCACTTGTGT............................................................................................ 23 2 1 87.00 87 63 11 4 9 0 0
.................................................................AACCCGTAGCTCCGAACTTGT.............................................................................................. 21 1 1 85.00 85 49 2 1 33 0 0
.................................................................AACCCGTAGATCCTAACTTGT.............................................................................................. 21 1 1 84.00 84 69 0 1 14 0 0
.................................................................AACCCGTAGATCCGGACTTGTG............................................................................................. 22 1 1 80.00 80 60 6 4 10 0 0
.................................................................AACCCGTAGATCCGAACTTGTGTA........................................................................................... 24 2 1 78.00 78 10 27 37 4 0 0
.................................................................AACCTGTAGATCCGAACTTGTG............................................................................................. 22 1 1 77.00 77 44 13 8 11 1 0
..................................................................ACCCGTAGATCCGAACTTGTGAA........................................................................................... 23 2 1 75.00 75 32 11 14 13 4 1
....................................................................CCGTAGATCCGAACTTGT.............................................................................................. 18 0 1 74.00 74 0 2 1 0 54 17
.................................................................AACCCGTAGATCCGAACTTGCG............................................................................................. 22 1 1 71.00 71 28 9 11 23 0 0
.................................................................AACCCGTAGATTCGAACTTGT.............................................................................................. 21 1 1 70.00 70 53 3 1 13 0 0
..................................................................ACCCGTAGATCCGAACTTGTGC............................................................................................ 22 0 1 70.00 70 33 6 11 17 3 0
.................................................................AACCCGTAGCTCCGAACTTGTG............................................................................................. 22 1 1 66.00 66 51 2 0 13 0 0
.................................................................AACCCGTAGATCCGAACTTGTGAT........................................................................................... 24 1 1 66.00 66 13 22 27 3 1 0
.................................................................AACCCGTAGATCCGAACTTGTAA............................................................................................ 23 2 1 64.00 64 40 9 3 7 4 1
.................................................................AACCCGTAGATCCGAA................................................................................................... 16 0 1 64.00 64 55 1 1 7 0 0
.................................................................AACCCGTAGATCCGAACTTGC.............................................................................................. 21 1 1 62.00 62 28 3 3 28 0 0
.................................................................AACCCGTAGATCCGAACTTGCGT............................................................................................ 23 2 1 58.00 58 18 18 14 8 0 0
.................................................................AACCCGCAGATCCGAACTTGTG............................................................................................. 22 1 1 55.00 55 31 8 5 10 0 1
.................................................................AACCCGTAGATCTGAACTTGTGT............................................................................................ 23 2 1 54.00 54 10 18 20 2 3 1
.................................................................AACCCGCAGATCCGAACTTGT.............................................................................................. 21 1 1 53.00 53 29 4 5 14 0 1
.................................................................AACCCGTCGATCCGAACTTGT.............................................................................................. 21 1 1 52.00 52 31 3 0 18 0 0
.................................................................AACCTGTAGATCCGAACTTGT.............................................................................................. 21 1 1 52.00 52 26 7 5 9 4 1
.................................................................GACCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 51.00 51 4 19 27 1 0 0
.................................................................AACCCGTAGATCTGAACTTGTGA............................................................................................ 23 2 1 49.00 49 17 7 2 8 10 5
.................................................................AACCCGTAGATCCGGACTTGTGT............................................................................................ 23 2 1 48.00 48 27 11 8 2 0 0
.................................................................AACCCGTAGATCCGAACTTGGG............................................................................................. 22 1 1 47.00 47 34 3 2 7 1 0
.................................................................AACCCGTAGATCCGAACTCGTG............................................................................................. 22 1 1 47.00 47 24 4 10 9 0 0
......................................................................GTAGATCCGAACTTGT.............................................................................................. 16 0 1 45.00 45 0 1 0 0 31 13
.................................................................AACCCGTAGATCCGAATTTGTGA............................................................................................ 23 2 1 44.00 44 17 18 6 3 0 0
.................................................................AACCCGTAGCTCCGAACTTGTGA............................................................................................ 23 2 1 43.00 43 33 0 1 9 0 0
.................................................................AACCCGTAGATCCGAACTTTTG............................................................................................. 22 1 1 42.00 42 26 6 5 5 0 0
.....................................................................CGTAGATCCGAACTTGTGA............................................................................................ 19 1 1 41.00 41 0 0 0 0 25 16
................................................................CAACCCGTAGATCCGAACTTGTGT............................................................................................ 24 2 1 41.00 41 2 17 20 2 0 0
.................................................................AACCCGTCGATCCGAACTTGTG............................................................................................. 22 1 1 40.00 40 30 3 1 6 0 0
.................................................................AACCCGTAGATTCGAACTTGTGT............................................................................................ 23 2 1 40.00 40 14 11 15 0 0 0
.................................................................GACCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 39.00 39 23 4 9 2 1 0
.................................................................AACTCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 39.00 39 26 3 1 9 0 0
.................................................................AACCCGTAGATCCGACCTTGTGA............................................................................................ 23 2 2 38.50 77 42 21 3 11 0 0
.................................................................AACCCGTAGATTCGAACTTGTGA............................................................................................ 23 2 1 38.00 38 26 1 1 10 0 0
.................................................................AACCCGTAGATCCGGACTTGTGA............................................................................................ 23 2 1 38.00 38 31 1 1 5 0 0
.................................................................CACCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 38.00 38 30 6 1 1 0 0
.................................................................AACCCGTAGATCCGAACTCGTGT............................................................................................ 23 2 1 37.00 37 7 14 16 0 0 0
.................................................................AATCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 34.00 34 18 6 3 7 0 0
...................................................................................................ACAAGCTTGTGTCTATAGGTAT........................................................... 22 0 1 34.00 34 5 15 12 2 0 0
.................................................................AACTCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 33.00 33 24 6 1 2 0 0
.................................................................AACCTGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 33.00 33 20 1 2 8 1 1
.................................................................AACCCATAGATCCGAACTTGTG............................................................................................. 22 1 1 33.00 33 15 4 12 1 1 0
.................................................................AACCCGTAGATCCGAACTTGAG............................................................................................. 22 1 1 32.00 32 14 4 4 10 0 0
....................................................................CCGTAGATCCGAACTTGTGA............................................................................................ 20 1 1 32.00 32 0 0 1 0 20 11
.................................................................TACCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 32.00 32 2 17 13 0 0 0
.................................................................AACTCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 31.00 31 15 4 3 8 0 1
.................................................................AACCCGTAGACCCGAACTTGTG............................................................................................. 22 1 1 31.00 31 21 4 4 2 0 0
.................................................................AACCCGTAGATCCAAACTTGTGT............................................................................................ 23 2 1 31.00 31 6 14 10 1 0 0
.................................................................AACCCGTAGATCCGAATTTGTGT............................................................................................ 23 2 2 30.50 61 15 24 19 3 0 0
.................................................................AACCCGTATATCCGAACTTGTG............................................................................................. 22 1 1 29.00 29 15 4 2 8 0 0
.................................................................AACCCGTAGATCCGAACCTGTGT............................................................................................ 23 2 1 29.00 29 8 11 8 2 0 0
.................................................................AACCCGTAGATCCGAACTTGCGA............................................................................................ 23 2 1 29.00 29 16 6 2 4 0 1
.................................................................TACCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 29.00 29 2 14 7 6 0 0
.................................................................AATCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 28.00 28 13 6 7 2 0 0
.................................................................AACCCGTAGGTCCGAACTTGT.............................................................................................. 21 1 1 28.00 28 16 4 3 5 0 0
.................................................................AACCCGTGGATCCGAACTTGT.............................................................................................. 21 1 1 28.00 28 15 5 2 6 0 0
.................................................................AACCCGTAGATCCGAACTCGT.............................................................................................. 21 1 1 28.00 28 16 1 1 9 0 1
.................................................................AGCCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 28.00 28 14 5 8 0 1 0
.................................................................AACCCGTAGATCCGACCTTGTGT............................................................................................ 23 2 2 27.50 55 23 15 7 10 0 0
.................................................................AACCCGTAGATCCGAACTTGG.............................................................................................. 21 1 1 27.00 27 22 0 0 4 1 0
.................................................................ACCCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 27.00 27 16 1 0 10 0 0
.................................................................AATCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 27.00 27 19 4 0 4 0 0
.................................................................AACCCGTAGACCCGAACTTGT.............................................................................................. 21 1 1 27.00 27 13 5 3 6 0 0
.................................................................AACCCATAGATCCGAACTTGTGT............................................................................................ 23 2 1 27.00 27 3 11 13 0 0 0
................................................................CAACCCGTAGATCCGAACTTGTG............................................................................................. 23 1 1 26.00 26 5 11 9 1 0 0
..................................................................ACCCGTAGATCCGAACTTG............................................................................................... 19 0 1 26.00 26 9 3 2 1 6 5
.................................................................AACCTGTAGATCCGAACTTGTGT............................................................................................ 23 2 2 25.50 51 6 24 21 0 0 0
.................................................................AACCCGTAGATCCGAACCTGTG............................................................................................. 22 1 1 25.00 25 9 6 7 3 0 0
....................................................................CCGTAGATCCGAACTTGTG............................................................................................. 19 0 1 25.00 25 1 2 1 0 14 7
.................................................................AACCCGCAGATCCGAACTTGTGA............................................................................................ 23 2 1 24.00 24 13 3 1 7 0 0
....................................................................CCGTAGATCCGAACTTGTGT............................................................................................ 20 1 1 24.00 24 0 10 9 0 3 2
.................................................................AACTCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 24.00 24 1 14 8 1 0 0
.................................................................AGCCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 24.00 24 13 5 1 5 0 0
.................................................................ACCCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 24.00 24 14 2 3 4 1 0
................................................................CAACCCGTAGATCCGAACTTGT.............................................................................................. 22 1 1 23.00 23 11 6 3 3 0 0
.................................................................AACCCGTAGATCCGTACTTGT.............................................................................................. 21 1 1 23.00 23 9 1 0 13 0 0
.................................................................AACCCGTAGATCCGAACCTGT.............................................................................................. 21 1 1 23.00 23 13 1 3 6 0 0
.................................................................AGCCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 23.00 23 2 14 5 2 0 0
.................................................................AACCCGTAGATCCAAACTTGTG............................................................................................. 22 1 1 22.00 22 10 4 3 4 1 0
.................................................................AACCCGTAGATCCGAACTTTT.............................................................................................. 21 1 1 21.00 21 19 2 0 0 0 0
...................................................................CCCGTAGATCCGAACTTGTGT............................................................................................ 21 1 1 21.00 21 0 10 11 0 0 0
.................................................................CACCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 21.00 21 21 0 0 0 0 0
.................................................................AATCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 21.00 21 4 9 8 0 0 0
.................................................................GACCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 21.00 21 10 3 6 2 0 0
.................................................................AACCCGTAGATCCGAGCTTGTG............................................................................................. 22 1 2 20.50 41 27 4 5 4 0 1
.................................................................TACCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 20.00 20 8 6 1 5 0 0
.................................................................AACCCGTAGACCCGAACTTGTGT............................................................................................ 23 2 1 20.00 20 2 9 6 3 0 0
.................................................................AACCCGTCGATCCGAACTTGTGT............................................................................................ 23 2 1 20.00 20 9 5 4 2 0 0
.................................................................AACCCGCAGATCCGAACTTGTGT............................................................................................ 23 2 1 20.00 20 8 7 4 1 0 0
.................................................................AACCCGTAGATCCGAACTTGTGAAA.......................................................................................... 25 3 1 20.00 20 10 1 2 4 3 0
.................................................................AACCCTTAGATCCGAACTTGTG............................................................................................. 22 1 1 20.00 20 11 1 2 6 0 0
.................................................................AACCCGTGGATCCGAACTTGTGT............................................................................................ 23 2 1 20.00 20 3 11 6 0 0 0
.................................................................AACCCGTAGATCCGAACTTGAGA............................................................................................ 23 2 1 20.00 20 11 1 0 8 0 0
.................................................................AACCCGTAGGTCCGAACTTGTG............................................................................................. 22 1 1 20.00 20 14 2 4 0 0 0
.................................................................AACCCGTGGATCCGAACTTGTG............................................................................................. 22 1 1 19.00 19 9 4 3 3 0 0
.....................................................................CGTAGATCCGAACTTGTGT............................................................................................ 19 1 1 18.00 18 0 4 2 0 10 2
.................................................................AACCCGTAGATCCGAACTTGTAT............................................................................................ 23 2 1 18.00 18 7 3 6 1 0 1
.................................................................AACCCGTAGATCCGAAATTGT.............................................................................................. 21 1 1 18.00 18 12 4 0 2 0 0
.................................................................AACCCGTAGATCCGAGCTTGT.............................................................................................. 21 1 2 17.50 35 24 5 2 4 0 0
.................................................................AACCCGTAGATCCAAACTTGT.............................................................................................. 21 1 1 17.00 17 11 4 2 0 0 0
.................................................................AACCCGTAGATCCCAACTTGTG............................................................................................. 22 1 1 17.00 17 10 2 3 2 0 0
.................................................................AACCCGTAGATCCGAACTTGTGCGAAC........................................................................................ 27 3 1 17.00 17 14 0 0 3 0 0
.................................................................AACCCGTAGCTCCGAACTTGTGT............................................................................................ 23 2 1 17.00 17 9 3 4 1 0 0
.................................................................AACCCTTAGATCCGAACTTGT.............................................................................................. 21 1 1 16.00 16 12 0 0 4 0 0
.................................................................AACCCGTAGATCCCAACTTGT.............................................................................................. 21 1 1 16.00 16 9 1 1 5 0 0
.................................................................CACCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 15.00 15 9 5 1 0 0 0
.................................................................AACCCGTAGATCCGAAATTGTGT............................................................................................ 23 2 1 15.00 15 2 8 5 0 0 0
.................................................................AACACGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 15.00 15 2 6 7 0 0 0
.................................................................AACCCGTCGATCCGAACTTGTGA............................................................................................ 23 2 1 14.00 14 7 2 0 5 0 0
................................................................CAACCCGTAGATCCGAACTTGTGA............................................................................................ 24 2 1 14.00 14 8 3 2 1 0 0
.................................................................AACCCTTAGATCCGAACTTGTGT............................................................................................ 23 2 1 14.00 14 5 2 5 2 0 0
.................................................................AACCCATAGATCCGAACTTGT.............................................................................................. 21 1 1 14.00 14 11 1 0 2 0 0
.................................................................AACCCGTATATCCGAACTTGT.............................................................................................. 21 1 1 14.00 14 6 0 1 7 0 0
.................................................................AACCCGTAGATCAGAACTTGT.............................................................................................. 21 1 1 14.00 14 6 4 0 4 0 0
.................................................................AACCCGTAGATCCGAACTTGTGTC........................................................................................... 24 2 1 14.00 14 8 2 2 2 0 0
.....................................................................CGTAGATCCGAACTTGTG............................................................................................. 18 0 1 13.00 13 1 1 2 0 4 5
.................................................................AACCCGTATATCCGAACTTGTGA............................................................................................ 23 2 1 13.00 13 7 1 1 4 0 0
.................................................................AACCCGTAGGTCCGAACTTGTGT............................................................................................ 23 2 1 13.00 13 3 3 6 1 0 0
.................................................................AACCCGTAGATCCGTACTTGTG............................................................................................. 22 1 1 13.00 13 7 1 3 2 0 0
.................................................................AACCCGAAGATCCGAACTTGT.............................................................................................. 21 1 1 13.00 13 7 1 0 5 0 0
.................................................................AACCCGTTGATCCGAACTTGT.............................................................................................. 21 1 1 13.00 13 5 2 2 3 1 0
.................................................................AACCCGTAGATCCGAACTTGTGAC........................................................................................... 24 2 1 13.00 13 6 2 3 2 0 0
.................................................................AACCCGTAGATCCGAACTTGTTT............................................................................................ 23 2 1 13.00 13 3 6 4 0 0 0
.................................................................AACCCGTAGATCCGAACTCGTGA............................................................................................ 23 2 1 13.00 13 8 1 3 1 0 0
.................................................................AACCCGTAGATCCGAACTTA............................................................................................... 20 1 1 13.00 13 8 2 1 1 1 0
.................................................................AACCCGTAGATCCGAACTTTTGT............................................................................................ 23 2 1 13.00 13 4 5 2 2 0 0
.................................................................AACCCGTAGATCCGAACTTGAGT............................................................................................ 23 2 1 13.00 13 2 7 4 0 0 0
.................................................................AACACGTAGATCCGAACTTGT.............................................................................................. 21 1 1 12.00 12 6 3 1 2 0 0
.................................................................AACCCGTAGATCCGAACTTGGGA............................................................................................ 23 2 1 12.00 12 9 0 0 3 0 0
.................................................................GACCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 12.00 12 5 5 1 1 0 0
.................................................................AACCCGTAAATCCGAACTTGTGT............................................................................................ 23 2 1 12.00 12 1 6 5 0 0 0
.................................................................AACCCGTAGATCCGAACTTATG............................................................................................. 22 1 1 12.00 12 4 3 1 4 0 0
.................................................................AACCCGTAGATCCGAGCTTGTGT............................................................................................ 23 2 2 12.00 24 4 14 5 1 0 0
.................................................................AACCCGTAGATCCGAACTTGGGT............................................................................................ 23 2 1 12.00 12 7 3 2 0 0 0
.................................................................AACCCGTAGGTCCGAACTTGTGA............................................................................................ 23 2 1 12.00 12 3 3 2 4 0 0
.................................................................AACCCGTGGATCCGAACTTGTGA............................................................................................ 23 2 1 12.00 12 8 1 0 3 0 0
.................................................................AACCCGTAGATCCGAACTTGTGAAC.......................................................................................... 25 3 1 11.00 11 9 1 0 1 0 0
.................................................................AGCCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 11.00 11 7 3 1 0 0 0
.................................................................AACCCGTAGATCCGAACTTATGT............................................................................................ 23 2 1 11.00 11 2 3 5 1 0 0
.................................................................AAGCCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 11.00 11 7 2 2 0 0 0
.................................................................AACCCGTAGATCCGCACTTG............................................................................................... 20 1 1 11.00 11 8 0 0 3 0 0
.................................................................AACCCCTAGATCCGAACTTGT.............................................................................................. 21 1 1 11.00 11 8 0 1 2 0 0
.................................................................AACCCGTATATCCGAACTTGTGT............................................................................................ 23 2 1 11.00 11 5 4 2 0 0 0
.................................................................AACCCGTAGATCCTAACTTGTGT............................................................................................ 23 2 1 11.00 11 4 2 4 1 0 0
.................................................................AACCCGTAGATCAGAACTTGTGT............................................................................................ 23 2 1 11.00 11 1 7 2 1 0 0
.................................................................AACCCGTAGATCCTAACTTGTGA............................................................................................ 23 2 1 11.00 11 8 0 0 3 0 0
.................................................................CACCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 11.00 11 11 0 0 0 0 0
.................................................................AACCCGTAGATCCGAAATTGTG............................................................................................. 22 1 1 11.00 11 6 1 2 1 0 1
.................................................................AACCCGAAGATCCGAACTTGTG............................................................................................. 22 1 1 11.00 11 6 2 1 2 0 0
....................................................................................................CAAGCTTGTGTCTATAGGTATG.......................................................... 22 0 1 11.00 11 2 3 2 0 1 3
..................................................................ACCCGTAGATCCGAACTTGTGCA........................................................................................... 23 1 1 10.00 10 7 0 0 2 1 0
.................................................................AACCCATAGATCCGAACTTGTGA............................................................................................ 23 2 1 10.00 10 3 6 0 1 0 0
.................................................................AACCCGTAAATCCGAACTTGTG............................................................................................. 22 1 1 10.00 10 7 1 2 0 0 0
.................................................................AACCCGTAGATCCAAACTTGTGA............................................................................................ 23 2 1 10.00 10 3 4 2 1 0 0
.................................................................AACCCGTAGATCCGAACTA................................................................................................ 19 1 1 10.00 10 7 0 2 1 0 0
.................................................................AACCCGTAGATCCGAACTTTG.............................................................................................. 21 2 1 10.00 10 6 0 0 4 0 0
.................................................................AACCCCTAGATCCGAACTTGTGT............................................................................................ 23 2 1 10.00 10 0 4 5 1 0 0
.................................................................AACCCGTAGAACCGAACTTGTGT............................................................................................ 23 2 1 9.00 9 0 2 7 0 0 0
.................................................................AACCCGTAGATCGGAACTTGT.............................................................................................. 21 1 1 9.00 9 6 1 0 2 0 0
.................................................................AACCCCTAGATCCGAACTTGTGA............................................................................................ 23 2 1 9.00 9 7 0 2 0 0 0
.................................................................AACCCGTAGATCCGAACTTTTGA............................................................................................ 23 2 1 9.00 9 8 0 0 1 0 0
.................................................................AACCCGTAGATCCGCTCTTGTGC............................................................................................ 23 2 2 9.00 18 18 0 0 0 0 0
.................................................................ATCCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 9.00 9 0 5 4 0 0 0
.................................................................AACCCGTAGATCGGAACTTGTGT............................................................................................ 23 2 1 8.00 8 3 1 3 1 0 0
......................................................................GTAGATCCGAACTTGTGA............................................................................................ 18 1 1 8.00 8 0 2 0 0 4 2
.................................................................AACCCGTAGATCCGAACTTGTGAAT.......................................................................................... 25 3 1 8.00 8 1 5 2 0 0 0
..................................................................ACCCGTAGATCCGAACTTGTGTT........................................................................................... 23 1 1 8.00 8 0 3 5 0 0 0
.................................................................AACCCGTAGAACCGAACTTGT.............................................................................................. 21 1 1 8.00 8 6 1 0 1 0 0
.................................................................AACCAGTAGATCCGAACTTGT.............................................................................................. 21 1 1 8.00 8 5 1 1 1 0 0
.................................................................AACCCGTAGATCCGACCTTG............................................................................................... 20 1 2 8.00 16 13 0 1 1 1 0
.................................................................AACCCGTAGATCCGAACTTGTGGAC.......................................................................................... 25 3 2 8.00 16 12 0 0 4 0 0
.................................................................AACCCGTAGATCCGAAATTGTGA............................................................................................ 23 2 1 8.00 8 3 2 1 2 0 0
.................................................................AACCCGTAGATCCGTACTTGTGA............................................................................................ 23 2 1 8.00 8 3 1 0 4 0 0
.................................................................AACGCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 8.00 8 5 1 1 1 0 0
.................................................................AACCCGTTGATCCGAACTTGTGT............................................................................................ 23 2 1 8.00 8 1 5 2 0 0 0
.................................................................AACCCGGAGATCCGAACTTGT.............................................................................................. 21 1 1 8.00 8 5 0 0 3 0 0
.................................................................AACCCCTAGATCCGAACTTGTG............................................................................................. 22 1 1 8.00 8 3 4 1 0 0 0
..................................................................ACCCGTAGATCCGAACTTGTGTA........................................................................................... 23 2 1 8.00 8 0 2 6 0 0 0
.................................................................AACCCGTAGATCCGAACTGGTG............................................................................................. 22 1 1 8.00 8 6 1 1 0 0 0
................................................................AAACCCGTAGATCCGA.................................................................................................... 16 0 2 7.50 15 14 0 0 1 0 0
.................................................................AACCCGTAGATCCGAACTTGTGGAGC......................................................................................... 26 3 2 7.50 15 14 0 0 1 0 0
.................................................................ATCCCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 7.00 7 4 1 2 0 0 0
...................................................................................................ACAAGCTTGTGTCTATAGGTA............................................................ 21 0 1 7.00 7 0 2 1 3 1 0
.................................................................TACCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 7.00 7 1 4 2 0 0 0
.................................................................AACCCGTAGATCCGAAGTTGT.............................................................................................. 21 1 1 7.00 7 4 1 1 1 0 0
.................................................................AACCCGTAGTTCCGAACTTGTG............................................................................................. 22 1 1 7.00 7 2 1 1 3 0 0
.................................................................AACCCGTAGATCCGAACTAGTG............................................................................................. 22 1 1 7.00 7 6 0 0 1 0 0
.................................................................AACCCGTAGATCCGATCTTGTTC............................................................................................ 23 2 2 7.00 14 13 0 0 1 0 0
.................................................................AACCCGTAGACCCGAACTTGTGA............................................................................................ 23 2 1 7.00 7 4 0 1 2 0 0
....................................................................................................CAAGCTTGTGTCTATAGGTAT........................................................... 21 0 1 7.00 7 3 1 1 0 2 0
.................................................................AACACGTAGATCCGAACTTGTG............................................................................................. 22 1 1 7.00 7 3 3 1 0 0 0
....................................................................CCGTAGATCCGAACTTG............................................................................................... 17 0 1 7.00 7 0 0 1 0 3 3
.................................................................AACCCGTAGATCCGAACCTGTGA............................................................................................ 23 2 1 7.00 7 3 2 1 1 0 0
.................................................................AAACCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 7.00 7 2 3 1 1 0 0
.................................................................AACCCGTAGATCCTAACTTG............................................................................................... 20 1 1 7.00 7 5 0 0 2 0 0
.................................................................AACCCGTAGAACCGAACTTGTG............................................................................................. 22 1 1 7.00 7 1 1 4 1 0 0
.................................................................AACCCGTAGATCGGAACTTGTG............................................................................................. 22 1 1 7.00 7 4 1 1 1 0 0
.................................................................AACCCGTAGATCCGAACTAGTGT............................................................................................ 23 2 1 7.00 7 3 2 2 0 0 0
.................................................................AACCCGAAGATCCGAACTTGTGA............................................................................................ 23 2 1 7.00 7 5 0 0 2 0 0
.................................................................AACCCGTTGATCCGAACTTGTG............................................................................................. 22 1 1 7.00 7 6 0 1 0 0 0
.................................................................AACCAGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 7.00 7 0 4 2 1 0 0
..................................................................ACCCGTAGATCCGAACTTGTGG............................................................................................ 22 1 2 6.50 13 4 0 1 0 6 2
.................................................................AACCCGTAGATCCGC.................................................................................................... 15 1 7 6.43 45 45 0 0 0 0 0
.................................................................AACCCGTAGTTCCGAACTTGT.............................................................................................. 21 1 1 6.00 6 3 2 0 1 0 0
.................................................................AACCCGTAGATCCGCACTTGTGC............................................................................................ 23 1 1 6.00 6 5 0 0 1 0 0
.................................................................AACCCTTAGATCCGAACTTGTGA............................................................................................ 23 2 1 6.00 6 3 2 0 1 0 0
.................................................................AACCCGTACATCCGAACTTGTG............................................................................................. 22 1 1 6.00 6 2 2 0 2 0 0
.................................................................AACCCGAAGATCCGAACTTGTGT............................................................................................ 23 2 1 6.00 6 1 0 4 1 0 0
.................................................................AACGCGTAGATCCGAACTTGT.............................................................................................. 21 1 1 6.00 6 3 1 1 1 0 0
.................................................................AACCCGTAGATCCGAACTTGTGTAA.......................................................................................... 25 3 2 6.00 12 3 1 6 2 0 0
.................................................................AACCCGTAGATCCGAACTTCTG............................................................................................. 22 1 1 6.00 6 2 0 2 1 0 1
.................................................................AACCCGTAGATCTGAACTTG............................................................................................... 20 1 1 6.00 6 3 0 0 0 3 0
..................................................................AACCGTAGATCCGAACTTGT.............................................................................................. 20 1 1 6.00 6 4 0 0 0 1 1
.................................................................AACCCGTAGATCCGAACTGGTGT............................................................................................ 23 2 1 6.00 6 3 1 2 0 0 0
.................................................................AACCCGTAGATACGAACTTGTG............................................................................................. 22 1 1 6.00 6 3 3 0 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTTC............................................................................................ 23 1 1 6.00 6 4 0 0 2 0 0
.................................................................AACCCGTAGATCCGAAGTTGTG............................................................................................. 22 1 1 6.00 6 2 0 2 2 0 0
.....................................................................CGTAGATCCGAACTTG............................................................................................... 16 0 1 6.00 6 0 0 0 0 2 4
.................................................................AACCCGTAGATCAGAACTTGTG............................................................................................. 22 1 1 6.00 6 2 2 2 0 0 0
.................................................................AAACCGTAGATCCGAACTTGTG............................................................................................. 22 1 1 6.00 6 2 4 0 0 0 0
.................................................................AACCAGTAGATCCGAACTTGTG............................................................................................. 22 1 1 6.00 6 2 3 0 1 0 0
..............................................................ATTAACCCGTAGATCCGAACTTGTGA............................................................................................ 26 3 2 5.50 11 0 9 2 0 0 0
......................................................................GTAGATCCGAACTTGTGT............................................................................................ 18 1 3 5.33 16 0 11 4 0 1 0
.................................................................AACCCGTAGATCCGAACTTGTGTTA.......................................................................................... 25 2 1 5.00 5 0 3 2 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTGGA........................................................................................... 24 2 2 5.00 10 0 6 2 0 1 1
.................................................................AACGCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 5.00 5 3 0 2 0 0 0
.................................................................ACCCCGTAGATCCGAACTTGTGA............................................................................................ 23 2 1 5.00 5 4 0 0 1 0 0
.................................................................AACCCGTACATCCGAACTTGTGT............................................................................................ 23 2 1 5.00 5 1 2 2 0 0 0
.................................................................AACCCGTAGATCCGAACTGGTGA............................................................................................ 23 2 1 5.00 5 2 0 0 3 0 0
.................................................................AACCCGTAGATCCGAACTTGTAAA........................................................................................... 24 3 1 5.00 5 2 1 1 1 0 0
.................................................................AACCCGTAGATACGAACTTGTGT............................................................................................ 23 2 1 5.00 5 1 1 3 0 0 0
..................................................................AACCGTAGATCCGAACTTGTGT............................................................................................ 22 2 1 5.00 5 0 2 3 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTC............................................................................................. 22 1 1 5.00 5 1 0 0 4 0 0
.................................................................AACCCGTAGATCCGATCTTGTGCA........................................................................................... 24 2 2 5.00 10 9 0 0 0 0 1
.................................................................AACCCGTAGATCCGAACTTCTGT............................................................................................ 23 2 1 5.00 5 0 3 2 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTGCA........................................................................................... 24 1 1 5.00 5 4 0 0 1 0 0
.................................................................AACCCGTAGTTCCGAACTTGTGT............................................................................................ 23 2 1 5.00 5 3 1 1 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTGAG........................................................................................... 24 2 1 5.00 5 1 1 0 2 1 0
.................................................................AAGCCGTAGATCCGAACTTGTGT............................................................................................ 23 2 1 5.00 5 0 5 0 0 0 0
.................................................................AACCCGTAGAGCCGAACTTGTG............................................................................................. 22 1 1 5.00 5 4 0 0 1 0 0
..................................................................ACCCGTAGATCCGAACTCGTGT............................................................................................ 22 2 1 5.00 5 0 2 3 0 0 0
.................................................................AACCCGTAGATCCGAACTGT............................................................................................... 20 2 3 4.33 13 11 0 0 2 0 0
..................................................................ACCTGTAGATCCGAACTTGTGA............................................................................................ 22 2 1 4.00 4 2 0 0 2 0 0
.................................................................AACCCGTAGATCCGAACTTGTTA............................................................................................ 23 2 1 4.00 4 1 1 0 2 0 0
.................................................................AACCCGTACATCCGAACTTGT.............................................................................................. 21 1 1 4.00 4 3 0 0 1 0 0
..................................................................AACCGTAGATCCGAACTTGTGA............................................................................................ 22 2 1 4.00 4 2 0 1 1 0 0
.................................................................AACCCGGAGATCCGAACTTGTGA............................................................................................ 23 2 1 4.00 4 2 0 0 2 0 0
.................................................................AACCCGTAGATCCGAACTGGT.............................................................................................. 21 1 1 4.00 4 2 2 0 0 0 0
.................................................................AACCCGTAGATCCGAACTTAT.............................................................................................. 21 1 1 4.00 4 3 0 1 0 0 0
.................................................................AACCCGTAGATGCGAACTTGT.............................................................................................. 21 1 1 4.00 4 4 0 0 0 0 0
.................................................................AACCCGTAGATCCGCACTTGTGAA........................................................................................... 24 3 1 4.00 4 2 0 0 2 0 0
.................................................................AACCCGTAGATTCGAACTTGTGAA........................................................................................... 24 3 1 4.00 4 4 0 0 0 0 0
......................................................................GTAGATCCGAACTTG............................................................................................... 15 0 1 4.00 4 0 0 0 0 2 2
.................................................................AACCCGTAGATTCGAACTTG............................................................................................... 20 1 1 4.00 4 3 0 0 0 0 1
.................................................................AACCCGTAGATCGGAACTTGTGA............................................................................................ 23 2 1 4.00 4 1 1 2 0 0 0
.................................................................AACCCGGAGATCCGAACTTGTG............................................................................................. 22 1 1 4.00 4 2 1 0 1 0 0
..................................................................ACCCGTAGATCCGAACTTGGGT............................................................................................ 22 2 1 4.00 4 0 4 0 0 0 0
.................................................................AACCCGTAGATCCGAACGTGTGT............................................................................................ 23 2 1 4.00 4 1 1 2 0 0 0
.................................................................AACCCGTAGATCCGAACTTGTGCT........................................................................................... 24 0 1 4.00 4 3 0 1 0 0 0
.................................................................AACCCGTAGATACGAACTTGT.............................................................................................. 21 1 1 4.00 4 3 0 0 0 0 1
.................................................................AACCCGTAGATCCGAACATGTGT............................................................................................ 23 2 1 4.00 4 0 2 2 0 0 0
.................................................................AACCCGTAGATTTGAACTTGTG............................................................................................. 22 2 1 4.00 4 2 0 0 2 0 0

Anti-sense strand reads

ATTGTAAAGTAAAAGTCTGTGCAGTTTGGGGGTGTGTTTTCTTCTATGCCTCCGGACAACGGTGTTTGGGCATCTAGGCTTGAACACGACTATCACGTGTGTTCGAACACAGATATCCATACACAGACACCCGCTAGAGTGTCCGGCGCCCGAGACGGACAGGCAGTAGTGTCAGGGAGG

********************************************..((((.....((((.(((.((((((.(((.((((((.((......)))))))).))).)))))).))).)))).....))))...**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
....................................................................................................................................................................AGTAGTGTCAGGCAG. 15 1 20 0.05 1 1

Generated: 09/01/2015 at 11:42 AM