ID:

ssc-let-7i

 Coordinate:

chr5:30021224-30021308 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-53.1 -52.9 -52.9

Sense Strand Reads

GCGGTTTCTGTCGCCTCAGCGTGGTCCGGTGCCTCCCCGACACCATGGCCCTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCCGCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAGTGCTGGTGATGCTCAACGCCGCGGAGGACAATGGCTGGGAATCCCCTTTG

****************************************(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).))))))).....************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR066809

ovary		 SRR1274763

ovary		 SRR139075

testes		 SRR1274764

testes		 SRR139076

testes
.......................................................TGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 0 1 831294.00 831294 450985 353378 15083 6229 4950 669
.......................................................TGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 1 1 80439.00 80439 41769 34612 1602 1056 1271 129
.......................................................TGAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 0 1 51084.00 51084 25540 21080 1184 2585 454 241
.......................................................TGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 1 1 30366.00 30366 15037 11959 820 1843 467 240
........................................................GAGGTAGTAGTTTGTGCTGTT............................................................................................................ 21 0 1 4850.00 4850 2530 2231 3 78 4 4
.......................................................TGAGGTAGTAGTTTGTGCTG.............................................................................................................. 20 0 2 3788.00 7576 3293 2729 271 1058 128 97
.......................................................TGAGGTAGTAGGTTGTGCTGTT............................................................................................................ 22 1 1 3226.00 3226 1742 1393 1 90 0 0
.......................................................TGAGGTAGTAGATTGTGCTGTT............................................................................................................ 22 1 1 2813.00 2813 1650 1159 0 4 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 0 1 1963.00 1963 930 1015 9 4 4 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTAT.......................................................................................................... 24 2 1 1105.00 1105 582 440 41 16 24 2
.......................................................TGAGGTAGTAGTTTGTGCTGTA............................................................................................................ 22 1 2 1016.00 2032 991 820 52 140 22 7
.......................................................TGAGGTAGTAGTTTGTGCT............................................................................................................... 19 0 2 955.50 1911 684 544 45 539 52 47
.......................................................TGAGGTAGTAGTTTGTGCTGTTAA.......................................................................................................... 24 2 1 843.00 843 429 292 21 46 32 23
.......................................................TGAGGTAGTAGTTTGTGCTGTTG........................................................................................................... 23 0 1 677.00 677 256 268 47 81 14 11
.......................................................TGAGGTAGTAGTTTGTGCTGTTTT.......................................................................................................... 24 2 1 637.00 637 287 260 18 51 8 13
.......................................................TGAGGTAGTAGTTTGTGC................................................................................................................ 18 0 2 624.00 1248 39 56 711 201 230 11
.......................................................TGAGGCAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 591.00 591 284 256 26 12 11 2
.......................................................TGGGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 463.00 463 248 205 2 5 2 1
.......................................................CGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 461.00 461 248 203 3 6 0 1
.......................................................TAAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 455.00 455 221 225 3 5 1 0
.......................................................TGAGGTAGCAGTTTGTGCTGTT............................................................................................................ 22 1 1 449.00 449 267 175 3 2 0 2
.......................................................TGAGGTAGTAGTTTGCGCTGTT............................................................................................................ 22 1 1 418.00 418 222 183 7 4 2 0
.......................................................TGAGGTAGTAGTTTGTGTTGTT............................................................................................................ 22 1 1 407.00 407 171 158 4 70 0 4
.......................................................TGAGGTGGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 406.00 406 227 171 2 5 0 1
.......................................................TGAGGTAGTAGTTCGTGCTGTT............................................................................................................ 22 1 1 374.00 374 206 158 2 4 4 0
.......................................................TGAGGTAGTAGGTTGTGCTGTTA........................................................................................................... 23 2 1 360.00 360 209 145 0 5 0 1
.......................................................TGAGGTAGTGGTTTGTGCTGTT............................................................................................................ 22 1 1 331.00 331 183 138 2 6 2 0
.......................................................TGAGGTAGTAGTTTATGCTGTT............................................................................................................ 22 1 1 314.00 314 172 137 2 2 0 1
.......................................................TGAGGTAGTAGTTTGTGCCGTT............................................................................................................ 22 1 1 301.00 301 159 137 3 2 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGTT............................................................................................................ 22 1 1 297.00 297 165 124 1 6 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAA........................................................................................................... 23 2 2 264.00 528 199 183 18 103 9 16
.......................................................TGAGGTAGTAGTCTGTGCTGTT............................................................................................................ 22 1 1 253.00 253 136 113 2 1 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTC........................................................................................................... 23 1 1 243.00 243 127 101 4 7 3 1
.......................................................TGAGGTAGTAGGTTGTGCGGTT............................................................................................................ 22 2 2 240.50 481 85 72 6 303 3 12
.......................................................TGAGGTAGTAGTTTGTGCTGCT............................................................................................................ 22 1 1 237.00 237 117 108 2 7 2 1
.......................................................TGAGGTAGTAGTTTTTGCTGTT............................................................................................................ 22 1 2 236.00 472 146 317 3 6 0 0
.......................................................TGAGGTAGAAGTTTGTGCTGTT............................................................................................................ 22 1 1 228.00 228 123 101 0 2 1 1
.......................................................TGAGGTAGTAGGTTGTGCTGT............................................................................................................. 21 1 1 227.00 227 115 89 0 23 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGA............................................................................................................. 21 1 2 219.50 439 155 144 9 111 7 13
.......................................................TGAGGTAGTAGTTTGTGCTGTC............................................................................................................ 22 1 1 210.00 210 117 88 2 2 0 1
........................................................GAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 22 1 2 201.50 403 188 195 0 18 1 1
...............................................................................................................CTGCGCAAGCTACTGCCTTGCT.................................................... 22 0 1 193.00 193 82 100 8 2 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTA.......................................................................................................... 24 2 1 187.00 187 104 68 2 7 2 4
.......................................................TGAGGTAGTAGATTGTGCTGT............................................................................................................. 21 1 1 186.00 186 117 69 0 0 0 0
.......................................................TGAGGTAGTAGATTGTGCTGTTA........................................................................................................... 23 2 2 165.00 330 182 146 0 2 0 0
........................................................GAGGTAGTAGTTTGTGCTGT............................................................................................................. 20 0 2 161.50 323 130 166 1 24 0 2
.......................................................TGAGATAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 157.00 157 88 68 0 1 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 24 1 1 153.00 153 78 73 0 2 0 0
.......................................................TGTGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 147.00 147 82 60 2 2 0 1
...............................................................................................................CTGCGCAAGCTACTGCCTTGC..................................................... 21 0 1 145.00 145 69 70 5 0 1 0
.......................................................TGAGGTAGTAGGTTGTG................................................................................................................. 17 1 18 139.06 2503 6 11 263 2064 107 52
.......................................................TGAGGTAGTAGTTTGTGCTATT............................................................................................................ 22 1 1 139.00 139 72 66 1 0 0 0
.......................................................TGAGGTAATAGTTTGTGCTGTT............................................................................................................ 22 1 1 138.00 138 84 53 0 0 1 0
.......................................................TGAGGTAGTAATTTGTGCTGTT............................................................................................................ 22 1 1 137.00 137 74 62 1 0 0 0
.......................................................TGAAGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 130.00 130 66 63 0 1 0 0
.......................................................TGAGGTTGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 129.00 129 68 59 0 0 0 2
.......................................................TGAGGTAGTAGTTAGTGCTGTT............................................................................................................ 22 1 1 126.00 126 76 48 0 1 0 1
.......................................................TGAGGTAGTCGTTTGTGCTGTT............................................................................................................ 22 1 1 126.00 126 53 54 8 8 1 2
.......................................................TGCGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 119.00 119 46 25 10 32 3 3
.......................................................TGAGGTAGTAGTTTGTGGTGTT............................................................................................................ 22 1 1 118.00 118 68 47 1 1 0 1
.......................................................TGAGGAAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 118.00 118 54 55 5 2 1 1
.......................................................TGAGGTAGTAGTTTGTGCAGTT............................................................................................................ 22 1 2 116.50 233 111 68 1 45 1 7
.......................................................TGAGGTAGTAGTTTGTACTGTT............................................................................................................ 22 1 2 114.50 229 126 76 3 22 1 1
.......................................................TGAGGTAGTAGTTTGTGCTTTT............................................................................................................ 22 1 1 114.00 114 43 61 0 9 0 1
......................................................CTGAGGTAGTAGTTTGTGCTGT............................................................................................................. 22 0 1 111.00 111 56 50 0 3 0 2
.......................................................TGAGGTAGTAGTTTGAGCTGTT............................................................................................................ 22 1 1 110.00 110 62 45 0 3 0 0
........................................................GAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 22 1 2 101.50 203 84 83 2 30 0 4
..........................................................GGTAGTAGTTTGTGCTGTT............................................................................................................ 19 0 1 98.00 98 48 45 2 0 3 0
.......................................................TGAGGTAGGAGTTTGTGCTGTT............................................................................................................ 22 1 1 97.00 97 62 31 0 3 0 1
.......................................................TGAGGGAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 96.00 96 54 31 5 4 0 2
.......................................................TGAGGTACTAGTTTGTGCTGTT............................................................................................................ 22 1 1 91.00 91 47 43 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAGA......................................................................................................... 25 2 1 90.00 90 55 31 0 3 1 0
.......................................................TGAGGTAGTAGATTGTGCTGTTT........................................................................................................... 23 2 1 90.00 90 48 41 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGATGTT............................................................................................................ 22 1 1 90.00 90 35 55 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTTCTGTT............................................................................................................ 22 1 1 89.00 89 41 41 1 6 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 88.00 88 44 40 0 4 0 0
.......................................................AGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 3 87.33 262 162 100 0 0 0 0
.......................................................TGAGGTATTAGTTTGTGCTGTT............................................................................................................ 22 1 1 87.00 87 40 40 0 6 0 1
.......................................................TGAGGTAGTAGTTTGGGCTGTT............................................................................................................ 22 1 1 87.00 87 50 36 0 0 1 0
.......................................................TGATGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 86.00 86 36 44 0 6 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTATT......................................................................................................... 25 2 1 84.00 84 35 34 7 0 8 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGA.......................................................................................................... 24 1 1 81.00 81 42 30 2 4 3 0
.......................................................TGAGGTCGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 81.00 81 45 25 1 7 2 1
.......................................................TGAGCTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 78.00 78 49 27 2 0 0 0
.......................................................GGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 78.00 78 41 37 0 0 0 0
.......................................................TGAGGTAGTATTTTGTGCTGTT............................................................................................................ 22 1 1 76.00 76 41 32 0 1 0 2
......................................................ATGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 1 1 68.00 68 36 32 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAC.......................................................................................................... 24 2 2 66.50 133 61 68 0 1 3 0
.......................................................TGAGGTAGTTGTTTGTGCTGTT............................................................................................................ 22 1 1 66.00 66 40 25 0 1 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 24 1 1 66.00 66 23 40 0 2 0 1
.......................................................TGACGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 65.00 65 30 35 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAG.......................................................................................................... 24 1 1 65.00 65 37 20 6 2 0 0
.......................................................TGAGGTAGTAGTTTGTCCTGTT............................................................................................................ 22 1 1 65.00 65 34 26 3 1 1 0
.......................................................TGAGGTAGTAGTATGTGCTGTT............................................................................................................ 22 1 1 63.00 63 29 30 0 3 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTGT.......................................................................................................... 24 1 1 57.00 57 27 19 6 3 2 0
.......................................................TGAGGTAGTAGTTTGTGTGGTT............................................................................................................ 22 2 4 56.75 227 67 48 1 105 0 6
.......................................................TGAGGTAGTAGTTTCTGCTGTT............................................................................................................ 22 1 1 55.00 55 19 32 1 3 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGAAC........................................................................................................ 26 2 1 55.00 55 0 1 0 52 1 1
.......................................................TGAGGTAGTAGTTTGTGCGGTT............................................................................................................ 22 1 1 52.00 52 18 15 1 18 0 0
.......................................................TGAGGTAGTAGGTTGTGCTGTTT........................................................................................................... 23 2 2 50.50 101 47 40 0 12 0 2
....................................................ATTTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 25 3 2 50.50 101 46 55 0 0 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTG...................................................... 20 0 1 50.00 50 22 24 0 3 0 1
.......................................................TGAGGTAGTAGTTTGTGCTTT............................................................................................................. 21 1 1 49.00 49 13 15 0 20 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTATA......................................................................................................... 25 3 1 48.00 48 25 22 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAT........................................................................................................... 23 2 3 47.00 141 55 43 4 29 3 7
.......................................................TGAGTTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 46.00 46 29 13 0 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGAT............................................................................................................ 22 1 1 46.00 46 31 15 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTTGTTA........................................................................................................... 23 2 1 45.00 45 17 14 0 12 1 1
.......................................................TAAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 45.00 45 19 26 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAC......................................................................................................... 25 3 2 43.00 86 40 38 1 7 0 0
.......................................................TGAGGTAGTAGTTTGCGCTGTTA........................................................................................................... 23 2 1 43.00 43 23 20 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTG................................................................................................................. 17 0 2 42.50 85 2 5 9 63 3 3
.......................................................TGAGGTAGTAGTTTGTGTTGT............................................................................................................. 21 1 1 41.00 41 15 7 1 17 0 1
...........................................................GTAGTAGTTTGTGCTGTT............................................................................................................ 18 0 1 41.00 41 21 20 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAT......................................................................................................... 25 2 1 40.00 40 21 19 0 0 0 0
.......................................................TCAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 40.00 40 25 12 1 1 1 0
.......................................................TGAGGTAGTAGTTTGTGCCGTTA........................................................................................................... 23 2 1 38.00 38 23 14 0 1 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGTTA........................................................................................................... 23 2 1 37.00 37 20 15 1 0 1 0
.......................................................TGAGGTAGTAGGTTGTGCGGT............................................................................................................. 21 2 2 36.00 72 9 5 0 55 2 1
.......................................................TGAGGTAGTAGTTTGTGCTA.............................................................................................................. 20 1 2 35.00 70 23 29 2 5 10 1
.......................................................TGAGGTAGCAGTTTGTGCTGTTA........................................................................................................... 23 2 1 32.00 32 13 19 0 0 0 0
.........................................................AGGTAGTAGTTTGTGCTGTT............................................................................................................ 20 0 1 32.00 32 13 5 2 11 1 0
.......................................................TGAGGTAGTAGTTTGTGCTT.............................................................................................................. 20 1 2 31.00 62 24 20 2 15 0 1
.......................................................TGAGGTAGTAGTCTGTGCTGTTA........................................................................................................... 23 2 1 31.00 31 17 13 0 1 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGT............................................................................................................. 21 1 1 31.00 31 20 9 1 1 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 30.00 30 5 3 0 19 1 2
.......................................................TGGGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 30.00 30 15 13 0 1 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAGAAC........................................................................................................ 26 3 1 30.00 30 0 0 0 23 0 7
.......................................................TGAGGTAGTAGTTTGTGCTGGT............................................................................................................ 22 1 2 30.00 60 34 25 0 1 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGT............................................................................................................. 21 1 1 29.00 29 17 6 0 6 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGTTA........................................................................................................... 23 2 1 29.00 29 11 18 0 0 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 2 28.00 56 27 21 3 0 5 0
.......................................................TGAGGTGGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 28.00 28 16 12 0 0 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTGTT.................................................... 22 1 1 27.00 27 17 10 0 0 0 0
.......................................................TGAGGTAGTAGTTGGTGCTGTT............................................................................................................ 22 1 1 27.00 27 16 10 1 0 0 0
.......................................................TGGGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 27.00 27 18 7 0 1 1 0
.......................................................TGAGGTAGTACTTTGTGCTGTT............................................................................................................ 22 1 1 27.00 27 14 10 1 0 2 0
.......................................................TGAGGCAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 26.00 26 9 8 1 7 1 0
......................................................CTGAGGTAGTAGTTTGTGCTG.............................................................................................................. 21 0 1 26.00 26 10 15 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTTT......................................................................................................... 25 2 1 26.00 26 12 12 1 0 1 0
.......................................................TGAGGTAGTAGGTTGTGCGGTTA........................................................................................................... 23 3 2 26.00 52 1 2 0 47 0 2
.......................................................TGAGGTAGTAGTTTGTGCTGCTT........................................................................................................... 23 2 1 26.00 26 8 16 0 2 0 0
.......................................................TGAGGTAGAAGTTTGTGCTGTTA........................................................................................................... 23 2 1 24.00 24 16 8 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAA......................................................................................................... 25 3 3 23.00 69 37 26 2 1 3 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGTAG........................................................................................................ 26 3 1 23.00 23 14 9 0 0 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGT............................................................................................................. 21 1 2 23.00 46 9 37 0 0 0 0
.......................................................TGAGGTAGCAGTTTGTGCTGT............................................................................................................. 21 1 1 23.00 23 14 5 1 2 1 0
.......................................................TGAGGTAGTAGTTTGCGCTGT............................................................................................................. 21 1 1 23.00 23 8 12 0 2 1 0
.............................................................AGTAGTTTGTGCTGTT............................................................................................................ 16 0 2 22.50 45 14 20 6 5 0 0
.......................................................TGAGGTAGTAGTTTATGCTGT............................................................................................................. 21 1 1 22.00 22 6 16 0 0 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGTTA........................................................................................................... 23 2 1 22.00 22 14 7 0 1 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGT............................................................................................................. 21 1 1 22.00 22 8 10 1 3 0 0
............................................................TAGTAGTTTGTGCTGTT............................................................................................................ 17 0 2 21.50 43 14 23 6 0 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 21.00 21 12 7 0 2 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGT............................................................................................................. 21 1 1 21.00 21 12 8 0 0 0 1
......................................................TTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 1 1 20.00 20 9 10 0 1 0 0
.......................................................TGAGGTAGTAGTTTGT.................................................................................................................. 16 0 3 20.00 60 5 2 0 47 2 4
.......................................................TGAGGTAGTAGTTTGTGCTGC............................................................................................................. 21 1 2 19.50 39 13 11 6 3 6 0
.......................................................TGAGGTAGTAGTTTGTTCTGTTA........................................................................................................... 23 2 1 19.00 19 8 10 0 1 0 0
......................................................GTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 1 1 19.00 19 9 10 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCCGT............................................................................................................. 21 1 1 19.00 19 9 8 0 2 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGTTT........................................................................................................... 23 2 1 19.00 19 10 9 0 0 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTGA..................................................... 21 1 1 18.00 18 5 13 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGGTCGGG..................................................................................................... 29 0 1 18.00 18 11 0 0 0 7 0
.......................................................TGAGATAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 18.00 18 7 9 0 2 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 18.00 18 10 7 0 1 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGTTT........................................................................................................... 23 2 1 17.00 17 9 5 0 1 1 1
.......................................................TGAGGTAGCAGTTTGTGCTGTTT........................................................................................................... 23 2 1 17.00 17 8 6 1 1 0 1
.......................................................CGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 2 17.00 34 19 14 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTATTA........................................................................................................... 23 2 1 17.00 17 6 10 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAG........................................................................................................... 23 1 2 17.00 34 12 8 1 10 1 2
.......................................................CGAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 2 16.50 33 12 15 0 4 0 2
.......................................................TGAGGTAGTAGTTTGTGCTGTTAGT......................................................................................................... 25 1 1 16.00 16 10 5 1 0 0 0
.......................................................TGAGGTAGAAGTTTGTGCTGT............................................................................................................. 21 1 1 16.00 16 9 4 0 3 0 0
.......................................................TGAGGTAGTAGTTTGTGTTGTTT........................................................................................................... 23 2 2 16.00 32 7 7 0 13 0 5
...............................................................................................................CTGCGCAAGCTACTGCCTTGCA.................................................... 22 1 1 15.00 15 6 9 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTCGAAC........................................................................................................ 26 3 1 15.00 15 0 0 0 14 0 1
.......................................................TGAGGTAGTAGTCTGTGCTGT............................................................................................................. 21 1 1 15.00 15 8 6 0 1 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGT............................................................................................................. 21 1 2 14.50 29 5 15 1 6 1 1
.......................................................TGAGGTAGTAGTTTGTGCTGTCA........................................................................................................... 23 2 2 14.00 28 12 14 1 0 1 0
.......................................................TGATGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 14.00 14 6 7 0 1 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 14.00 14 5 8 0 1 0 0
.......................................................TGAGGTAGTAGATTGTGCTG.............................................................................................................. 20 1 2 14.00 28 14 13 0 0 0 1
.......................................................TGCGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 14.00 14 5 4 0 4 0 1
.......................................................TGAGGTAGTAGGTTGTGCTG.............................................................................................................. 20 1 3 14.00 42 17 16 0 8 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTCT.......................................................................................................... 24 2 1 14.00 14 8 5 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTC.......................................................................................................... 24 2 2 13.50 27 12 13 0 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGATA........................................................................................................... 23 2 1 13.00 13 5 7 0 1 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTGCTT................................................... 23 1 1 13.00 13 3 9 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGAC......................................................................................................... 25 2 1 13.00 13 0 1 0 12 0 0
.......................................................TGAGGTTGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 13.00 13 10 3 0 0 0 0
.......................................................TGAGGAAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 13.00 13 6 3 0 2 0 2
.......................................................TGAGGTAGTAGTTTGTGCTTTTA........................................................................................................... 23 2 1 12.00 12 6 6 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAAA.......................................................................................................... 24 3 2 12.00 24 9 13 2 0 0 0
........................................................GAGGTAGTAGTTTGTGCTG.............................................................................................................. 19 0 3 12.00 36 16 13 0 7 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGTTA........................................................................................................... 23 2 1 12.00 12 6 4 0 2 0 0
.......................................................TGAGGTAGTAGTTTGTTCTGT............................................................................................................. 21 1 1 12.00 12 9 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTATGCTGTTA........................................................................................................... 23 2 2 12.00 24 13 9 0 0 2 0
.......................................................TGAGGTAGTAGTTTGCGCTGTTT........................................................................................................... 23 2 1 12.00 12 5 5 0 1 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGCTA........................................................................................................... 23 2 1 12.00 12 5 4 0 1 0 2
.......................................................TGAGGTAGTAGTTTGGGCTGTTA........................................................................................................... 23 2 1 11.00 11 3 5 0 1 0 2
.......................................................TGAGGTAGTAGTGTGTGCTGTT............................................................................................................ 22 1 1 11.00 11 3 8 0 0 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 11.00 11 2 0 1 7 0 1
.......................................................TGAGGTAGTATTTTGTGCTGTTA........................................................................................................... 23 2 1 11.00 11 5 4 0 1 0 1
.......................................................TGAGGTCGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 11.00 11 6 3 0 1 1 0
.......................................................TGAGGTAGTAGTTTGTGCTCTT............................................................................................................ 22 1 1 11.00 11 4 5 1 1 0 0
.......................................................TGAGATAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 11.00 11 7 4 0 0 0 0
.....................................................AATGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 2 1 11.00 11 4 7 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTACTGTTA........................................................................................................... 23 2 2 11.00 22 13 8 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCAGT............................................................................................................. 21 1 2 10.50 21 7 3 1 7 0 3
.......................................................TGAGGAAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 10.00 10 4 6 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCGGT............................................................................................................. 21 1 1 10.00 10 0 1 0 9 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGGT......................................................................................................... 25 0 1 10.00 10 6 4 0 0 0 0
.......................................................TGAGGTAATAGTTTGTGCTGTTA........................................................................................................... 23 2 1 10.00 10 5 4 0 1 0 0
.......................................................TGTGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 10.00 10 5 5 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGATGTTA........................................................................................................... 23 2 1 10.00 10 3 7 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGAGC........................................................................................................ 26 2 1 10.00 10 0 0 0 9 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTGC.......................................................................................................... 24 1 1 10.00 10 6 2 0 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTG............................................................................................................ 22 1 2 10.00 20 10 7 2 0 1 0
..............................................................GTAGTTTGTGCTGTT............................................................................................................ 15 0 6 9.83 59 17 41 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGGTGT............................................................................................................. 21 1 1 9.00 9 3 4 1 1 0 0
.....................................................ATTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 2 1 9.00 9 4 5 0 0 0 0
.......................................................TGAGGTAGTAATTTGTGCTGT............................................................................................................. 21 1 1 9.00 9 6 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAGAGC........................................................................................................ 26 3 1 9.00 9 0 0 0 9 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGT............................................................................................................. 21 1 1 9.00 9 2 4 0 3 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGTTT........................................................................................................... 23 2 1 9.00 9 5 3 0 1 0 0
........................................................GAGGCAGTAGTTTGTGCTGTT............................................................................................................ 21 1 1 9.00 9 3 6 0 0 0 0
.....................................CGACACCATGGCCCTGGC.................................................................................................................................. 18 0 1 9.00 9 2 6 0 0 1 0
.......................................................TGAGGTAGTAGTTAGTGCTGTTA........................................................................................................... 23 2 1 9.00 9 4 5 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTAT............................................................................................................. 21 1 1 9.00 9 5 4 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAG......................................................................................................... 25 3 1 9.00 9 4 5 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAC........................................................................................................... 23 2 2 8.50 17 12 4 0 0 1 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAGA.......................................................................................................... 24 2 2 8.50 17 10 5 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTACTGT............................................................................................................. 21 1 2 8.50 17 9 4 0 2 1 1
.......................................................TGAGGTAGTAGTTTGTGCTGTGA........................................................................................................... 23 2 2 8.50 17 1 7 1 8 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTAT......................................................................................................... 25 2 1 8.00 8 3 5 0 0 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 8.00 8 4 3 0 1 0 0
.....................................................ACTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 1 1 8.00 8 4 4 0 0 0 0
.......................................................TGAGCTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 8.00 8 5 2 0 0 1 0
.......................................................TGAGGTAGAAGTTTGTGCTGTTT........................................................................................................... 23 2 1 8.00 8 4 4 0 0 0 0
.......................................................TGAGGTAGTAGTTAGTGCTGT............................................................................................................. 21 1 1 8.00 8 4 3 0 0 0 1
.......................................................TGAGGTAGGAGGTTGTGCTGTT............................................................................................................ 22 2 1 8.00 8 3 5 0 0 0 0
........................................................TAGGTAGTAGTTTGTGCTGTT............................................................................................................ 21 1 1 8.00 8 4 4 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGG.......................................................................................................... 24 0 1 8.00 8 5 3 0 0 0 0
......................................................ATGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 24 2 1 8.00 8 5 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTGGTTA........................................................................................................... 23 3 6 7.67 46 6 5 0 31 0 4
.......................................................TGAAGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 2 7.50 15 8 7 0 0 0 0
.......................................................TGAGGTAGTAGTTTG................................................................................................................... 15 0 11 7.27 80 0 2 24 37 16 1
.......................................................TGAGGTAGTAGTTTGTGCA............................................................................................................... 19 1 3 7.00 21 4 3 0 14 0 0
.......................................................CGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 2 7.00 14 5 6 0 2 0 1
.......................................................TGAAGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 7.00 7 4 2 0 1 0 0
.......................................................TGAGGTAGTAGTTTCTGCTGT............................................................................................................. 21 1 1 7.00 7 3 2 0 2 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 7.00 7 2 4 0 0 0 1
........................................................GAGGTAGTAGATTGTGCTGTT............................................................................................................ 21 1 1 7.00 7 3 4 0 0 0 0
.......................................................TGAGGTCGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 7.00 7 2 3 0 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCAGTTA........................................................................................................... 23 2 2 7.00 14 8 3 0 3 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTG.......................................................................................................... 24 1 1 7.00 7 1 5 0 1 0 0
.....................................................CATGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 2 1 7.00 7 4 3 0 0 0 0
.......................................................TGAGGTAGTAGTATGTGCTGT............................................................................................................. 21 1 1 7.00 7 3 3 0 1 0 0
.......................................................TGAGGTACTAGTTTGTGCTGT............................................................................................................. 21 1 1 7.00 7 3 3 0 1 0 0
.......................................................TGTGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 7.00 7 4 3 0 0 0 0
.......................................................TCAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 7.00 7 4 2 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGATGT............................................................................................................. 21 1 1 7.00 7 2 4 0 1 0 0
.......................................................TGAGGTATTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 7.00 7 4 1 0 2 0 0
.......................................................TGACGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 7.00 7 3 3 0 0 1 0
.......................................................TGAGCTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 7.00 7 3 3 0 0 1 0
.......................................................TGAGGTAGTAGTTTATGCTGTTT........................................................................................................... 23 2 2 6.50 13 8 5 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAAC........................................................................................................ 26 3 2 6.50 13 6 1 0 6 0 0
.......................................................TGAGGTAGTAATTTGTGCTGTTA........................................................................................................... 23 2 2 6.50 13 8 4 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTCT............................................................................................................. 21 1 1 6.00 6 3 3 0 0 0 0
.......................................................TGAGGTAGTTGTTTGTGCTGT............................................................................................................. 21 1 1 6.00 6 4 2 0 0 0 0
........................................................GAGGTAGTAGTTTGTGCTGTTG........................................................................................................... 22 0 1 6.00 6 0 4 0 2 0 0
........................................................GAGGTAGTAGGTTGTGCTGTT............................................................................................................ 21 1 1 6.00 6 5 1 0 0 0 0
.......................................................TGAGGTAGTTGTTTGTGCTGTTA........................................................................................................... 23 2 1 6.00 6 4 2 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAGC......................................................................................................... 25 2 1 6.00 6 4 1 0 1 0 0
.......................................................TGAGGTATTAGTTTGTGCTGT............................................................................................................. 21 1 1 6.00 6 4 2 0 0 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTA............................................................................................................ 23 1 1 6.00 6 4 2 0 0 0 0
.......................................................GGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 2 6.00 12 5 7 0 0 0 0
.......................................................TGAGGTAGTAGTTTGGGCTGT............................................................................................................. 21 1 1 6.00 6 3 0 0 3 0 0
.......................................................TGATGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 6.00 6 1 2 0 1 0 2
.......................................................TGAGGTCGTAGTTTGTGCTGT............................................................................................................. 21 1 1 6.00 6 2 1 0 3 0 0
.......................................................TGAGGTAATAGTTTGTGCTGTTT........................................................................................................... 23 2 1 6.00 6 2 4 0 0 0 0
.......................................................TGAGGTAGTAGTTTCTGCTGTTA........................................................................................................... 23 2 2 5.50 11 10 1 0 0 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTT........................................................................................................... 23 2 4 5.50 22 7 13 0 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTTA......................................................................................................... 25 3 3 5.33 16 5 8 2 0 1 0
.......................................................TGCGGTAGTAGTTTGTGCTG.............................................................................................................. 20 1 2 5.00 10 0 0 0 10 0 0
.......................................................TGAGGTAGGAGTTTGTGCTGT............................................................................................................. 21 1 1 5.00 5 2 2 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGGTCGG...................................................................................................... 28 0 1 5.00 5 1 0 0 0 0 4
.......................................................TGAGGTTGTAGTTTGTGCTGT............................................................................................................. 21 1 1 5.00 5 3 2 0 0 0 0
......................................................ATGAGGTAGTAGTTTGTGCTGT............................................................................................................. 22 1 1 5.00 5 1 4 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTGAGC......................................................................................................... 25 3 2 5.00 10 0 0 0 9 0 1
.....................................................TCTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 1 1 5.00 5 3 2 0 0 0 0
.......................................................TGAGGTAGGAGTTTGTGCTGTTA........................................................................................................... 23 2 1 5.00 5 2 2 0 1 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGTTT........................................................................................................... 23 2 1 5.00 5 2 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGGTGTTT........................................................................................................... 23 2 1 5.00 5 4 1 0 0 0 0
.......................................................AGAGGTAGTAGGTTGTGCTGTT............................................................................................................ 22 2 3 5.00 15 13 2 0 0 0 0
.......................................................TGAGGAAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 5.00 5 0 2 0 2 0 1
.......................................................TGAGGTAGTAGGTTGTGCTGTA............................................................................................................ 22 2 2 5.00 10 7 2 0 1 0 0
.......................................................TGAAGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 5.00 5 2 2 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGGTT........................................................................................................... 23 2 2 5.00 10 4 2 0 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGGTCGGGT.................................................................................................... 30 0 1 5.00 5 4 0 0 0 1 0

Anti-sense strand reads

CGCCAAAGACAGCGGAGTCGCACCAGGCCACGGAGGGGCTGTGGTACCGGGACCGACTCCATCATCAAACACGACAACCAGCCCAACACTGTAACGGGCGACACCTCTATTGACGCGTTCGATGACGGAACGATCACGACCACTACGAGTTGCGGCGCCTCCTGTTACCGACCCTTAGGGGAAAC

*************************************(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).))))))).....**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1274764

testes		 SRR066810

testes
.................................................................CAAACACGACAACCAGCCC..................................................................................................... 19 0 1 2.00 2 2 0
..CCAAAGACAGCGGAGTCGCACCAGGCC............................................................................................................................................................ 27 0 1 1.00 1 0 1

Generated: 09/01/2015 at 11:37 AM