ID:

ssc-let-7g

 Coordinate:

chr13:37599004-37599083 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.1 -49.7 -49.5

Sense Strand Reads

TGCATCCTGAAGAGTTCCTCCAACGCTCCGTATCCTTTTGCCTGATTCCAGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGGAACAGTGCGCCAGCTACTGAGTGGGGCGGAGAGGATGGCGACGCC

***********************************...((((((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))))).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066810

testes		 SRR066809

ovary		 SRR1274763

ovary		 SRR139076

testes		 SRR1274764

testes
.....................................................TGAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 0 1 128737.00 128737 47726 31220 30627 8511 4957 5696
.....................................................TGAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 0 1 24896.00 24896 15503 2683 2791 1028 1870 1021
.....................................................TGAGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 1 1 8159.00 8159 4178 1398 1321 220 751 291
.....................................................TGAGGTAGTAGTTTGTACAGTTT........................................................................................................ 23 0 1 5436.00 5436 3013 760 790 218 483 172
.....................................................TGAGGTAGTAGTTTGTACAG........................................................................................................... 20 0 1 4360.00 4360 3228 109 109 148 641 125
......................................................GAGGTAGTAGTTTGTACAGTT......................................................................................................... 21 0 1 1452.00 1452 873 210 297 10 57 5
.....................................................TGAGGTAGTAGTTTGTACA............................................................................................................ 19 0 1 601.00 601 211 123 147 36 32 52
.....................................................TGAGGTAGTAGTTTGTACAGTA......................................................................................................... 22 1 1 591.00 591 331 62 108 35 24 31
....................................................CTGAGGTAGTAGTTTGTACAGTT......................................................................................................... 23 0 1 508.00 508 172 88 124 47 34 43
.....................................................TGAGGTAGTAGGTTGTACAGTT......................................................................................................... 22 1 3 472.33 1417 999 202 172 17 20 7
.....................................................TGAGGTAGTAGTTTGTACAGA.......................................................................................................... 21 1 1 422.00 422 255 39 42 20 38 28
.....................................................TGAGGTAGTAGTTTGTACAGTTG........................................................................................................ 23 1 1 354.00 354 248 31 32 18 22 3
.....................................................TGAGGTAGTAGTTTGTATAGTT......................................................................................................... 22 1 5 322.00 1610 935 336 254 6 75 4
.....................................................TGAGGTAGTAGTTTGTAC............................................................................................................. 18 0 1 292.00 292 65 35 54 46 6 86
.....................................................TGAGGTAGTAGTTTGTACAA........................................................................................................... 20 1 1 284.00 284 255 2 2 4 21 0
.....................................................TGAGGTAGTAGTTTGTACCGTT......................................................................................................... 22 1 1 271.00 271 200 22 33 1 14 1
......................................................GAGGTAGTAGTTTGTACAGT.......................................................................................................... 20 0 1 268.00 268 211 17 22 1 14 3
.....................................................TGCGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 248.00 248 217 4 2 1 23 1
.....................................................TGAGGTAGTAGTTTGTACAGTTAA....................................................................................................... 24 2 1 238.00 238 92 31 20 8 66 21
....................................................CTGAGGTAGTAGTTTGTACAGT.......................................................................................................... 22 0 1 210.00 210 124 16 27 9 23 11
.....................................................TGAGGTAGTAGATTGTACAGTT......................................................................................................... 22 1 3 205.33 616 146 274 180 3 12 1
.....................................................TGAGGCAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 171.00 171 72 20 26 23 17 13
.....................................................TGAGGTAGTAGTTTTTACAGTT......................................................................................................... 22 1 1 137.00 137 95 8 26 0 8 0
.....................................................TGAGGTATTAGTTTGTACAGTT......................................................................................................... 22 1 1 123.00 123 102 3 6 0 12 0
.....................................................TGAGGTAGTAGTTTGTGCAGTT......................................................................................................... 22 1 2 116.50 233 45 111 68 1 7 1
.....................................................TGAGGTAGTAGTTTGTACTGTT......................................................................................................... 22 1 2 114.50 229 22 126 76 3 1 1
.....................................................TGAGGTAGTAGTTTGTACAGTAA........................................................................................................ 23 2 1 114.00 114 77 4 2 5 21 5
.....................................................TGAGGTAGTAGTTTGTACAGTTAT....................................................................................................... 24 2 1 114.00 114 54 19 18 2 15 6
.....................................................TGAGGTAGTAGTTTGTACGGTT......................................................................................................... 22 1 1 112.00 112 75 17 12 2 3 3
.......................................................AGGTAGTAGTTTGTACAGTT......................................................................................................... 20 0 1 101.00 101 96 0 0 0 4 1
.....................................................TGAGGTAGTGGTTTGTACAGTT......................................................................................................... 22 1 1 93.00 93 60 8 17 3 3 2
.....................................................TGAGGTAGCAGTTTGTACAGTT......................................................................................................... 22 1 1 88.00 88 41 22 18 5 0 2
.....................................................TGAGGTAGTAGGTTGTACAGT.......................................................................................................... 21 1 3 83.67 251 204 18 22 2 4 1
.....................................................TGGGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 82.00 82 44 18 16 2 2 0
.....................................................TGCGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 82.00 82 75 0 0 0 6 1
.....................................................TGAGGTGGTAGTTTGTACAGTT......................................................................................................... 22 1 1 82.00 82 45 12 14 2 8 1
.....................................................TGAGGTAGTAGTTTGTACAGTC......................................................................................................... 22 1 1 75.00 75 29 15 13 3 6 9
.....................................................CGAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 73.00 73 31 11 26 1 3 1
.....................................................TGAGGTAGTAGTTTGCACAGTT......................................................................................................... 22 1 1 72.00 72 42 12 12 0 5 1
.....................................................TGAGGTAGTCGTTTGTACAGTT......................................................................................................... 22 1 1 68.00 68 58 2 3 1 4 0
.....................................................TGAGGTAGTAGTTTGTA.............................................................................................................. 17 0 1 68.00 68 45 5 9 2 3 4
.....................................................TGAGGTAGTAGTTTGTACAGTTTT....................................................................................................... 24 1 1 67.00 67 30 9 12 6 6 4
.....................................................TAAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 66.00 66 36 11 14 0 3 2
.....................................................TGAGGTAGTAGTTCGTACAGTT......................................................................................................... 22 1 1 64.00 64 35 10 16 1 1 1
.....................................................TGAGGTAGTATTTTGTACAGTT......................................................................................................... 22 1 1 63.00 63 50 3 2 0 7 1
.....................................................TGAGGTAGTAGCTTGTACAGTT......................................................................................................... 22 1 1 63.00 63 39 11 7 2 4 0
.....................................................TGAGGTAGTAGTTTGTATAGT.......................................................................................................... 21 1 5 62.00 310 176 63 53 3 14 1
......................................................GAGGTAGTAGTTTGTACAGTTA........................................................................................................ 22 1 1 60.00 60 37 7 12 1 3 0
..............................................................................................................CTGTACAGGCCACTGCCTTGCT................................................ 22 1 1 59.00 59 0 16 40 1 1 1
.....................................................TGATGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 56.00 56 43 1 4 0 8 0
......................................................GAGGTAGTAGTTTGTACAG........................................................................................................... 19 0 1 56.00 56 46 1 1 0 8 0
.....................................................TGAGGTAGTAGTTTGTACAGTTC........................................................................................................ 23 1 1 55.00 55 19 17 15 2 2 0
......................................................GAGGTAGTAGTTTGTACAGTTT........................................................................................................ 22 0 1 54.00 54 29 6 11 0 8 0
.....................................................TGAGGTAGTAGTTTGTACAGCT......................................................................................................... 22 1 1 53.00 53 28 7 8 3 6 1
.....................................................TGAGGTAGTAGTTTGTCCAGTT......................................................................................................... 22 1 1 43.00 43 30 3 7 0 3 0
.....................................................TGAGGTAGTAGTTTATACAGTT......................................................................................................... 22 1 1 42.00 42 18 12 9 0 1 2
.....................................................TGAGGTAGTAGTCTGTACAGTT......................................................................................................... 22 1 1 41.00 41 20 6 11 3 1 0
.....................................................TGAGGTAGAAGTTTGTACAGTT......................................................................................................... 22 1 1 41.00 41 17 13 10 0 1 0
.....................................................AGAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 40.00 40 17 6 12 0 5 0
.....................................................TGAGGTACTAGTTTGTACAGTT......................................................................................................... 22 1 1 39.00 39 27 4 5 1 2 0
.....................................................TGAGGGAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 38.00 38 27 3 5 1 2 0
.....................................................TGAGGTATTAGTTTGTACAGT.......................................................................................................... 21 1 1 37.00 37 34 0 0 0 3 0
.....................................................TGAAGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 36.00 36 23 6 3 1 3 0
.....................................................TGAGGCAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 36.00 36 24 2 0 3 5 2
.....................................................TGAGGTAGTAGTTTGTACCGT.......................................................................................................... 21 1 1 35.00 35 33 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTACAGTAT........................................................................................................ 23 1 1 33.00 33 27 1 1 0 2 2
.....................................................TGAGGTAGTAGTTTGTACAGGT......................................................................................................... 22 1 1 32.00 32 23 0 6 0 3 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTA....................................................................................................... 24 1 1 32.00 32 14 1 11 0 4 2
.....................................................TGAGGTAGTAGATTGTACAGT.......................................................................................................... 21 1 3 31.67 95 41 26 25 0 2 1
.....................................................TTAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 31.00 31 19 6 3 0 3 0
.....................................................TGAGGTAGTAGTTTGTACAGAA......................................................................................................... 22 2 1 31.00 31 19 0 1 7 4 0
.....................................................TGAGGTAGGAGTTTGTACAGTT......................................................................................................... 22 1 1 30.00 30 20 5 4 0 1 0
.....................................................TGAGGTAGTAGTTTGTACATTT......................................................................................................... 22 1 1 28.00 28 21 1 2 0 4 0
.....................................................TGAGGTAGTAGTTAGTACAGTT......................................................................................................... 22 1 1 28.00 28 15 8 4 1 0 0
.....................................................TGAGGTGGTAGTTTGTACAGT.......................................................................................................... 21 1 1 28.00 28 21 2 2 2 1 0
.....................................................TGAGGTCGTAGTTTGTACAGTT......................................................................................................... 22 1 1 27.00 27 21 1 1 2 1 1
.....................................................TGAGGTAGTAGTTTCTACAGTT......................................................................................................... 22 1 1 27.00 27 18 3 4 1 1 0
.....................................................TGAGGTAGTAGTTTGTATAGTTA........................................................................................................ 23 2 5 26.60 133 88 23 7 0 15 0
.....................................................TGAGGTAGTAGTTTGTACGGT.......................................................................................................... 21 1 1 26.00 26 23 0 0 0 3 0
....................................................CTGAGGTAGTAGTTTGTACAG........................................................................................................... 21 0 1 26.00 26 21 0 0 2 3 0
.....................................................TGAGGTAGTAGTTTGTATAGTTT........................................................................................................ 23 1 4 25.50 102 79 9 5 0 9 0
.....................................................TGTGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 25.00 25 12 7 5 1 0 0
.....................................................TGAGGTAGTGGTTTGTACAGT.......................................................................................................... 21 1 1 25.00 25 21 0 0 0 4 0
.....................................................TGAGATAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 25.00 25 8 8 6 1 2 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTC....................................................................................................... 24 1 1 24.00 24 22 1 0 0 1 0
.....................................................TGAGGAAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 24.00 24 13 2 3 2 3 1
..............................................................................................................CTGTACAGGCCACTGCCTTGC................................................. 21 0 1 24.00 24 0 4 14 5 0 1
.....................................................GGAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 23.00 23 18 3 2 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGAT......................................................................................................... 22 1 1 22.00 22 8 4 6 1 3 0
.....................................................TGAGGTAGTTGTTTGTACAGTT......................................................................................................... 22 1 1 22.00 22 11 5 5 0 1 0
.....................................................TGCGGTAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 21.00 21 20 0 0 0 1 0
.....................................................TGAGGTAGTCGTTTGTACAGT.......................................................................................................... 21 1 1 20.00 20 20 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGT............................................................................................................... 16 0 3 20.00 60 47 5 2 0 4 2
.....................................................TGAGGTAGCAGTTTGTACAGT.......................................................................................................... 21 1 1 20.00 20 13 1 3 1 2 0
.....................................................TGCGGTAGTAGTTTGTACAG........................................................................................................... 20 1 1 20.00 20 18 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTAGAGTT......................................................................................................... 22 1 1 20.00 20 12 3 2 3 0 0
.....................................................TGAGGTAGTAGTTTGGACAGTT......................................................................................................... 22 1 1 19.00 19 14 2 3 0 0 0
.....................................................TGAGGTAGTAGTATGTACAGTT......................................................................................................... 22 1 1 19.00 19 8 7 4 0 0 0
....................................................CTGAGGTAGTAGTTTGTACAGTTT........................................................................................................ 24 0 1 19.00 19 2 4 7 4 0 2
.....................................................TGAGGCAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 18.00 18 9 3 3 0 3 0
.....................................................TGGGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 18.00 18 13 1 4 0 0 0
.....................................................TGAGGTTGTAGTTTGTACAGTT......................................................................................................... 22 1 1 18.00 18 9 4 3 1 1 0
.....................................................TGAGGTAGTAGGTTGTACAGTTT........................................................................................................ 23 1 3 17.00 51 38 5 5 0 3 0
.....................................................TGAGGTAGTAGTTTGTACCGTTT........................................................................................................ 23 1 1 17.00 17 13 0 1 0 3 0
.....................................................TGAGGTAGTAATTTGTACAGTT......................................................................................................... 22 1 1 17.00 17 5 4 8 0 0 0
......................................................TAGGTAGTAGTTTGTACAGTT......................................................................................................... 21 1 1 16.00 16 15 0 1 0 0 0
.....................................................TGCGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 16.00 16 14 0 0 0 1 1
.....................................................TGAGGTAATAGTTTGTACAGTT......................................................................................................... 22 1 1 16.00 16 8 2 6 0 0 0
.....................................................TGAGGTAGTACTTTGTACAGTT......................................................................................................... 22 1 1 16.00 16 9 2 1 0 2 2
.....................................................TGAGTTAGTAGTTTGTACAGTT......................................................................................................... 22 1 2 15.50 31 22 3 4 0 2 0
.....................................................TGAGGTAGTAGTTTGTACAT........................................................................................................... 20 1 1 15.00 15 15 0 0 0 0 0
.....................................................TGAGGTATTAGTTTGTACAGTTA........................................................................................................ 23 2 1 15.00 15 13 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGAACAGTT......................................................................................................... 22 1 1 14.00 14 9 3 0 1 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTGAGGGT.................................................................................................. 29 0 1 14.00 14 0 3 0 0 10 1
.....................................................TGAGGTAGTAGATTGTACAGTTT........................................................................................................ 23 1 2 14.00 28 9 10 7 0 2 0
....................................................CTGAGGTAGTAGTTTGTACAGTTA........................................................................................................ 24 1 1 14.00 14 0 5 9 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGC.......................................................................................................... 21 1 1 14.00 14 8 2 0 2 2 0
.....................................................TGAGGTAGTAGTTTTTACAGT.......................................................................................................... 21 1 2 13.50 27 17 4 3 0 3 0
.....................................................TGAGGTAGTAGTTTGTACCGTTA........................................................................................................ 23 2 1 13.00 13 9 1 2 0 1 0
.....................................................TGAGCTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 13.00 13 5 2 4 0 1 1
.....................................................TGAGGTAGTAGGTTGTACAG........................................................................................................... 20 1 4 12.50 50 44 1 4 0 1 0
.....................................................TGAGGTAGTAGTTTGAACAGT.......................................................................................................... 21 1 1 12.00 12 11 0 1 0 0 0
.....................................................TGAGGTAGTAGTTCGTACAGT.......................................................................................................... 21 1 1 12.00 12 11 0 0 0 1 0
.....................................................TGAGGTAGTGGTTTGTACAGTTT........................................................................................................ 23 1 1 12.00 12 8 0 2 0 2 0
.......................................................AGGTAGTAGTTTGTACAGT.......................................................................................................... 19 0 2 11.50 23 20 0 0 0 3 0
.....................................................TGAGGTAGTCGTTTGTACAG........................................................................................................... 20 1 1 11.00 11 9 0 0 0 2 0
.....................................................TGAGGTAGTAGCTTGTACAGT.......................................................................................................... 21 1 1 11.00 11 7 4 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACTGTTA........................................................................................................ 23 2 2 11.00 22 1 13 8 0 0 0
.....................................................TGAGGTAGAAGTTTGTACAGT.......................................................................................................... 21 1 1 11.00 11 6 1 2 0 2 0
.....................................................TGAGGTAGTAGTTTGTACAGTG......................................................................................................... 22 1 1 11.00 11 3 1 2 3 1 1
.....................................................TGAGGTAGTAGTTTGTAAAGTT......................................................................................................... 22 1 1 11.00 11 3 0 7 1 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTGA....................................................................................................... 24 2 1 11.00 11 4 2 3 0 2 0
.....................................................TGAAGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 11.00 11 8 0 1 0 2 0
.....................................................TGAGGTATTAGTTTGTACAGTTT........................................................................................................ 23 1 1 11.00 11 7 0 0 0 4 0
.....................................................TGAGGTAGTAGTTTGTGCAGT.......................................................................................................... 21 1 2 10.50 21 7 7 3 1 3 0
.....................................................TGAGGTAGTAGTTTGTTCAGTT......................................................................................................... 22 1 2 10.50 21 11 4 5 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTGAGGGTC................................................................................................. 30 0 1 10.00 10 0 1 1 1 5 2
.....................................................TGAGGTAGTAGATTGTACAGTTA........................................................................................................ 23 2 3 10.00 30 13 5 11 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTCT........................................................................................................ 23 1 1 10.00 10 2 2 0 0 2 4
....................................................ATGAGGTAGTAGTTTGTACAGTT......................................................................................................... 23 1 1 10.00 10 2 4 3 0 1 0
.....................................................TGAGGTACTAGTTTGTACAGT.......................................................................................................... 21 1 1 10.00 10 6 1 1 0 2 0
.....................................................TGAGGTAGTGGTTTGTACAGTTA........................................................................................................ 23 2 1 10.00 10 5 1 1 0 3 0
.....................................................TGAGGTAGTAGTTTGTACAATT......................................................................................................... 22 1 1 10.00 10 3 4 3 0 0 0
.....................................................TGAGGTAGTAGGTTGTACAGTTA........................................................................................................ 23 2 5 9.80 49 26 13 7 0 3 0
.....................................................TGAGGGAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 9.00 9 8 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACGGTTA........................................................................................................ 23 2 1 9.00 9 8 0 0 0 1 0
......................................................GAGGTAGTAGTTTGTACAGA.......................................................................................................... 20 1 1 9.00 9 8 0 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTAAA............................................................................................................ 19 1 1 9.00 9 8 0 0 0 0 1
.....................................................TGAGGTGGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 9.00 9 8 1 0 0 0 0
.....................................................TGACGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 9.00 9 4 1 3 0 1 0
.....................................................TGAGGTAGTAGTTTGTAA............................................................................................................. 18 1 2 8.50 17 14 1 0 1 0 1
.....................................................TGAGGTAGTAGTTTGTACTGT.......................................................................................................... 21 1 2 8.50 17 2 9 4 0 1 1
.....................................................TTAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
.....................................................TGAGGCAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 8.00 8 5 0 0 0 3 0
.....................................................TGAGGAAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 8.00 8 5 0 1 1 1 0
.....................................................TGAGGTAGCAGTTTGTACAGTTT........................................................................................................ 23 1 1 8.00 8 4 1 2 0 1 0
..............................................................................................................CTGTACAGGCCACTGCCTTGCTA............................................... 23 1 1 8.00 8 1 0 7 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTAAA...................................................................................................... 25 2 1 8.00 8 1 4 0 0 1 2
.....................................................TCAGGTAGTAGTTTGTACAGTT......................................................................................................... 22 1 1 8.00 8 6 2 0 0 0 0
.....................................................TGAGGTAGTAGTCTGTACAGT.......................................................................................................... 21 1 1 8.00 8 6 0 1 0 1 0
....................................................CTGAGGTAGTAGTTTGTACA............................................................................................................ 20 0 1 8.00 8 4 2 1 0 1 0
.....................................................TGAGGTAGTAGTTTGTATAG........................................................................................................... 20 1 5 7.80 39 25 3 2 0 9 0
.....................................................TGAGGTAGTAGTTTG................................................................................................................ 15 0 11 7.27 80 37 0 2 24 1 16
.....................................................TGAGGTGGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 7.00 7 6 1 0 0 0 0
.....................................................TGAGGTAGTAGTTTATACAGT.......................................................................................................... 21 1 1 7.00 7 6 0 0 0 1 0
.....................................................CGAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 2 7.00 14 7 0 3 1 3 0
.....................................................TAAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 2 7.00 14 11 2 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTGCAGTTA........................................................................................................ 23 2 2 7.00 14 3 8 3 0 0 0
.....................................................TGAGGTAGTAGTTTGTAGAGT.......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
......................................................GAGGTATTAGTTTGTACAGTT......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTGCA............................................................................................................ 19 1 3 7.00 21 14 4 3 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTCA........................................................................................................ 23 2 1 7.00 7 3 0 0 0 3 1
.....................................................TGAGGTCGTAGTTTGTACAGT.......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
......................................................GAGGTAGTAGTTTGTACA............................................................................................................ 18 0 1 7.00 7 3 0 3 0 1 0
....................................................TTGAGGTAGTAGTTTGTACAGTT......................................................................................................... 23 1 1 7.00 7 2 1 3 0 1 0
.....................................................TGAGGCAGTAGTTTGTACAG........................................................................................................... 20 1 1 7.00 7 6 0 0 0 1 0
.....................................................TGAGGTAGTTGTTTGTACAGT.......................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACCG........................................................................................................... 20 1 1 6.00 6 5 0 0 0 1 0
..............................................................................................................CTGTACAGGCCACTGCCTTGCTT............................................... 23 2 1 6.00 6 0 1 4 1 0 0
.....................................................TGAGGTAGTAGTTTGTACTGTTT........................................................................................................ 23 1 1 6.00 6 3 2 1 0 0 0
.....................................................TGGGGTAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 6.00 6 5 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTCCAGT.......................................................................................................... 21 1 1 6.00 6 5 0 0 1 0 0
.....................................................TGAGGTAGTAGTTCGTACAG........................................................................................................... 20 1 1 6.00 6 5 0 0 0 1 0
.....................................................TGAGGTGGTAGTTTGTACAG........................................................................................................... 20 1 1 6.00 6 4 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTACAGTTGTAG..................................................................................................... 26 2 1 6.00 6 0 3 2 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAAT.......................................................................................................... 21 1 1 6.00 6 3 1 0 1 1 0
..............................................................................................................CTGTACAGGCCACTGCCTTGCTAT.............................................. 24 2 1 6.00 6 2 0 2 2 0 0
.....................................................TAAGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 6.00 6 3 0 2 0 1 0
.....................................................TGAGGTAGTAGTTTCTACAGT.......................................................................................................... 21 1 1 6.00 6 5 0 0 0 1 0
.....................................................TGAGGTAGTACTTTGTACAGT.......................................................................................................... 21 1 1 6.00 6 4 0 0 1 0 1
.....................................................TGAGGTAGTAGTTTGTACGGTTT........................................................................................................ 23 1 1 6.00 6 4 1 0 0 1 0
.....................................................TGAGGTTGTAGTTTGTACAGT.......................................................................................................... 21 1 1 6.00 6 3 0 2 0 1 0
.....................................................TGAGGTAGTATTTTGTACAGT.......................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
.....................................................TGAGGTAGTATTTTGTACAGTTA........................................................................................................ 23 2 1 6.00 6 4 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTGCTGTTTTA...................................................................................................... 25 3 3 5.33 16 0 5 8 2 0 1
.....................................................TGAGGTAGTAGTTTGTACAGTTGAAC..................................................................................................... 26 3 1 5.00 5 5 0 0 0 0 0
.......................................................AGGTAGTAGTTTGTACAGTTA........................................................................................................ 21 1 1 5.00 5 3 1 0 0 1 0
.....................................................TGAGGTAGTAGTTTTTACAGTTA........................................................................................................ 23 2 1 5.00 5 3 0 1 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTAG....................................................................................................... 24 1 1 5.00 5 2 1 1 0 1 0
....................................................CTGAGGTAGTAGTTTGTACAGA.......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
.....................................................TGAGGTAGTCGTTTGTACAGTTT........................................................................................................ 23 1 1 5.00 5 4 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTATACAGTTT........................................................................................................ 23 1 1 5.00 5 3 0 1 1 0 0
.....................................................TGAGGTAGTAGTTGGTACAGTT......................................................................................................... 22 1 1 5.00 5 3 0 1 0 0 1
.......................................................AGGTAGTAGTTTGTACAGGT......................................................................................................... 20 1 1 5.00 5 3 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTACATTTT........................................................................................................ 23 1 1 5.00 5 2 0 0 0 3 0
.....................................................TGAGGTAGTAGTTTGCACAGT.......................................................................................................... 21 1 2 5.00 10 6 1 1 1 1 0
.....................................................CGAGGTAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 5.00 5 2 0 1 0 2 0
....................................................TTGAGGTAGTAGTTTGTACAGT.......................................................................................................... 22 1 1 5.00 5 3 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGGACAGTTA........................................................................................................ 23 2 1 5.00 5 5 0 0 0 0 0
.....................................................TCAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTAA...................................................................................................... 25 1 1 5.00 5 4 0 0 0 1 0
.....................................................TGGGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 5.00 5 4 0 0 0 1 0
.....................................................TGATGTAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 5.00 5 4 0 1 0 0 0
.....................................................TGATGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 5.00 5 3 0 1 0 1 0
......................................................GCGGTAGTAGTTTGTACAGTT......................................................................................................... 21 1 1 5.00 5 3 0 0 0 2 0
......................................................GAGGTAGTAGTTTGTACAGTTG........................................................................................................ 22 1 1 5.00 5 4 0 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTACC..................................................................................................... 26 3 1 5.00 5 3 0 0 0 2 0
............................................................................................................AACTGTACAGGCCACTGCCTTGC................................................. 23 0 1 5.00 5 0 1 2 2 0 0
.....................................................TGAGGTAGCAGTTTGTACAGTTA........................................................................................................ 23 2 1 5.00 5 2 0 1 0 1 1
......................................................GAGGTAGTAGTTTGTACAGTA......................................................................................................... 21 1 2 4.50 9 7 0 2 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTGT....................................................................................................... 24 2 2 4.50 9 2 1 6 0 0 0
..................................................ATTTGAGGTAGTAGTTTGTACAGTT......................................................................................................... 25 3 3 4.33 13 0 5 8 0 0 0
.....................................................GGAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGCTG........................................................................................................ 23 2 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGG.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................TTAGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 2 0 1 0 1 0
.....................................................TGAGGTAGGAGTTTGTACAGT.......................................................................................................... 21 1 2 4.00 8 5 0 0 1 2 0
.....................................................CGAGGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 1 1 1 0 1 0
.....................................................TGAGGTAGTAGTTTGGACAGT.......................................................................................................... 21 1 1 4.00 4 3 0 0 0 0 1
.....................................................TGATGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTCCAGTTA........................................................................................................ 23 2 1 4.00 4 3 0 0 0 1 0
....................................................TTGAGGTAGTAGTTTGTACAG........................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................AGAGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 4.00 4 1 1 1 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTTC...................................................................................................... 25 2 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGGAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 4.00 4 2 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGTACAGTGA........................................................................................................ 23 2 1 4.00 4 3 0 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGGTT........................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTCTGTACAGTTT........................................................................................................ 23 1 1 4.00 4 3 0 1 0 0 0
...................................................TCTGAGGTAGTAGTTTGTACAGTT......................................................................................................... 24 1 1 4.00 4 2 1 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTGCCGTTT........................................................................................................ 23 2 2 4.00 8 0 4 3 0 1 0
.....................................................TGAGGTAGTCGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTATGTACAGT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTAAGC...................................................................................................... 25 3 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGCTTGTACAGTTT........................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGGAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 2 0 0 0 2 0
.....................................................TGAGGTCGTAGTTTGTACAG........................................................................................................... 20 1 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTCGCC..................................................................................................... 26 3 1 4.00 4 4 0 0 0 0 0
.....................................................TGGGGTAGTAGTTTGTACAG........................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTCTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 2 1 0 0 1 0
.....................................................TGAGGTAGTAGTTAGTACAGT.......................................................................................................... 21 1 1 4.00 4 3 1 0 0 0 0
........................................................GGTAGTAGTTTGTACAGTT......................................................................................................... 19 0 1 4.00 4 0 0 0 4 0 0
..............................................................................................................CTGTACAGGCCACTGCCTTGCCA............................................... 23 0 1 4.00 4 0 2 2 0 0 0
.............................................................................................................ACTGTACAGGCCACTGCCTTGC................................................. 22 0 1 4.00 4 0 0 2 1 0 1
.....................................................TGAAGTAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGCACAGTTA........................................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0
....................................................CTGAGGTAGTAGGTTGTACAGTT......................................................................................................... 23 1 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGTACTAGTTTGTACAG........................................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTG....................................................................................................... 24 0 1 4.00 4 3 1 0 0 0 0
....................................................ATGAGGTAGTAGTTTGTACAGT.......................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
....................................................CTGAGGTAGTAGTTTGTAC............................................................................................................. 19 0 1 4.00 4 2 0 0 0 1 1
.....................................................TGAGGTAGTAGTTTGTACAGTTCGGT..................................................................................................... 26 3 1 4.00 4 3 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTCGG...................................................................................................... 25 2 1 4.00 4 3 0 0 0 1 0
..........................................................TAGTAGTTTGTACAGTT......................................................................................................... 17 0 1 4.00 4 1 0 1 2 0 0
.....................................................TGAGGTAGTAGTTTGTACACT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGGGGTAGTTTGTACAGTT......................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTAAC..................................................................................................... 26 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTGAGGG................................................................................................... 28 0 1 3.00 3 0 0 0 0 3 0
.....................................................TGAGGTAGTAGTTTGCACAGTTT........................................................................................................ 23 1 1 3.00 3 2 0 1 0 0 0
.....................................................TGAGGCAGTAGTTTGTACAGTTG........................................................................................................ 23 2 1 3.00 3 2 0 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTACATT.......................................................................................................... 21 1 1 3.00 3 1 1 1 0 0 0
.....................................................TGAGGTAGTAGTTTATACAGTTA........................................................................................................ 23 2 1 3.00 3 0 0 3 0 0 0
......................................................GAGGTAGTATTTTGTACAGTT......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTAAAGT.......................................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0
.....................................................TGAGGTAGTAGTTTGTAAAGTTA........................................................................................................ 23 2 1 3.00 3 1 0 2 0 0 0
.......................................................AGGTAGTAGTTTGTACAGTTT........................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACACTTA........................................................................................................ 23 2 1 3.00 3 2 1 0 0 0 0
.....................................................TGAGGTAGTAATTTGTACAGT.......................................................................................................... 21 1 1 3.00 3 1 1 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTCGGA...................................................................................................... 25 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACACTT......................................................................................................... 22 1 1 3.00 3 2 0 0 0 0 1
.....................................................TGAGGTAGTAGTTTGTACAGTTCA....................................................................................................... 24 2 1 3.00 3 2 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTGCTGTTTAA...................................................................................................... 25 3 2 3.00 6 0 4 2 0 0 0
.....................................................TGAGGGAGTAGTTTGTACAG........................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTCGAC..................................................................................................... 26 2 1 3.00 3 2 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTACC...................................................................................................... 25 3 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTACTTTGTACAG........................................................................................................... 20 1 1 3.00 3 2 0 0 1 0 0
.....................................................TGAGGTAGGAGTTTGTACAGTTT........................................................................................................ 23 1 1 3.00 3 1 0 0 0 2 0
.....................................................TGAGGTAGTAGTTTGAACAGTTA........................................................................................................ 23 2 1 3.00 3 2 0 0 0 1 0
.....................................................TGTGGTAGTAGTTTGTACAGT.......................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0
.....................................................TGAGGTAGTAGTTTCTACAGTTT........................................................................................................ 23 1 1 3.00 3 2 0 1 0 0 0
......................................................GAGGGAGTAGTTTGTACAGTT......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTTTCACC.................................................................................................... 27 3 1 3.00 3 2 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTGCAGTTT........................................................................................................ 23 1 1 3.00 3 1 2 0 0 0 0
.....................................................TAAGGTAGTAGTTTGTACAGTTT........................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGAAGTAGTTTGTACAG........................................................................................................... 20 1 1 3.00 3 2 0 0 0 1 0
.....................................................TGAGGCAGTAGTTTGTACAGCT......................................................................................................... 22 2 1 3.00 3 1 0 0 0 1 1
.....................................................TGAGGAAGTAGTTTGTACAGTTA........................................................................................................ 23 2 1 3.00 3 2 0 0 0 1 0
.....................................................TGAGGTAGTAGTTTGTACAGTTAAC...................................................................................................... 25 3 1 3.00 3 2 0 0 0 1 0
......................................................GAGGCAGTAGTTTGTACAGTT......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
......................................................GAGGTAGTAGTTTTTACAGTT......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGAGGTAGTAGTTTGTACAGTGT........................................................................................................ 23 1 1 3.00 3 0 0 2 1 0 0
.....................................................TGAGGTAGTCGTTTGTACCGTT......................................................................................................... 22 2 1 3.00 3 2 0 0 0 1 0

Anti-sense strand reads

ACGTAGGACTTCTCAAGGAGGTTGCGAGGCATAGGAAAACGGACTAAGGTCCGACTCCATCATCAAACATGTCAAACTCCCAGATACTATGGTGGGCCATGTCCTCTATTGACATGTCCGGTGACGGAACGGTCCTTGTCACGCGGTCGATGACTCACCCCGCCTCTCCTACCGCTGCGG

***********************************...((((((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))))).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:26 AM