ID:

ssc-let-7f-2

 Coordinate:

chr3:44864800-44864896 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.4 -48.3
mature

  1. ssc-let-7f-2  chr3:44864810-44864831 +
  2. ssc-let-7f-1  chrX:51801782-51801803 -
star

Sense Strand Reads

TGATGATGCAACATAAAGAGATTGTGCTCTATTCCCGAAGAAGAGATTGCTCTATCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTAGACTTGCTGCATTTTGTTTCTACCTAGATATTAAAACTCAGAAGAATTAA

*********************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR066809

ovary		 SRR139075

testes		 SRR139076

testes		 SRR1274763

ovary		 SRR1274764

testes
............................................................TGAGGTAGTAGATTGTATAGTT................................................................................................................... 22 0 2 510500.50 1021001 389483 347114 216412 28355 28159 11478
............................................................TGAGGTAGTAGATTGTATAGT.................................................................................................................... 21 0 2 101114.50 202229 67014 62401 56429 7240 5926 3219
............................................................TGAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 1 2 45410.00 90820 23127 20430 39475 6500 693 595
............................................................TGAGGTAGTAGATTGTATAG..................................................................................................................... 20 0 2 9266.50 18533 2650 1994 11048 2097 312 432
............................................................TGAGGTAGTAGATTGTATAGTTG.................................................................................................................. 23 0 1 3070.00 3070 344 322 2095 242 54 13
.............................................................GAGGTAGTAGATTGTATAGTT................................................................................................................... 21 0 2 2622.00 5244 1833 1987 1286 115 18 5
............................................................TGAGGTAGTAGATTGTATAGTA................................................................................................................... 22 1 2 1709.00 3418 700 790 1541 149 194 44
............................................................TGAGGTAGTAGATTGTATA...................................................................................................................... 19 0 2 1685.00 3370 285 277 2357 268 58 125
............................................................TGAGGTAGTAGATTGTAT....................................................................................................................... 18 0 2 1483.00 2966 148 144 2405 143 50 76
...........................................................CTGAGGTAGTAGATTGTATAGTT................................................................................................................... 23 1 2 1191.00 2382 754 787 618 200 15 8
............................................................TGAGGTAGTAGATTGTATAGTAA.................................................................................................................. 23 2 2 1175.00 2350 276 300 1456 272 30 16
............................................................TGAGGTAGTAGATTGTATAGTTAA................................................................................................................. 24 2 3 1064.00 3192 564 555 1443 596 22 12
............................................................TGAGGTAGTAGGTTGTATAGTTG.................................................................................................................. 23 1 4 1034.50 4138 98 125 3464 317 101 33
............................................................TGAGGTAGTAGATTGTATAGA.................................................................................................................... 21 1 2 972.50 1945 419 506 771 133 61 55
............................................................TGAGGTAGTAGATTGTATGGTT................................................................................................................... 22 1 3 714.67 2144 859 655 603 21 5 1
............................................................TGAGGTAGTAGATTGTATAGTTC.................................................................................................................. 23 1 2 704.00 1408 639 569 159 30 6 5
............................................................TGAGGTAGTAGATTGTA........................................................................................................................ 17 0 2 702.00 1404 117 147 917 40 101 82
............................................................TGCGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 499.50 999 22 30 866 68 9 4
.............................................................GAGGTAGTAGATTGTATAGT.................................................................................................................... 20 0 2 470.00 940 279 292 339 21 7 2
............................................................TGAGGCAGTAGATTGTATAGTT................................................................................................................... 22 1 2 439.50 879 227 211 300 71 47 23
............................................................TGAGGTAGTAGATTGTGTAGTT................................................................................................................... 22 1 2 342.50 685 213 194 244 30 3 1
............................................................TGAGGTAGTAGATTGTATAGTTAT................................................................................................................. 24 1 2 339.00 678 161 160 275 71 9 2
............................................................TGAGGTAGTAGTTTGTATAGTT................................................................................................................... 22 1 5 322.00 1610 336 254 935 75 6 4
............................................................CGAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 310.50 621 231 207 145 35 2 1
............................................................TGGGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 296.50 593 190 193 171 29 9 1
............................................................TGAGGTGGTAGATTGTATAGTT................................................................................................................... 22 1 2 294.00 588 199 160 192 26 8 3
............................................................TGAGGTAGTAGATTGTATAA..................................................................................................................... 20 1 2 284.00 568 78 102 333 37 11 7
...........................................................CTGAGGTAGTAGATTGTATAGT.................................................................................................................... 22 1 2 280.50 561 158 194 164 43 2 0
............................................................TAAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 278.50 557 161 229 153 8 4 2
............................................................TGAGGTAGCAGATTGTATAGTT................................................................................................................... 22 1 2 270.50 541 190 155 154 26 12 4
............................................................TGAGGTAGTAGATTGCATAGTT................................................................................................................... 22 1 2 269.00 538 172 138 192 25 6 5
............................................................TGAGGTAGTAGATTGTATAGTC................................................................................................................... 22 1 2 265.00 530 211 168 91 14 14 32
............................................................TGAGGTAGTGGATTGTATAGTT................................................................................................................... 22 1 2 251.50 503 192 169 121 16 3 2
............................................................TGAGGTAGTAGATTGTATAGCT................................................................................................................... 22 1 2 241.50 483 138 128 171 34 10 2
............................................................TGAGGTAGTAGATTGTATCGTT................................................................................................................... 22 1 2 233.00 466 43 43 335 42 3 0
...........................................................GTGAGGTAGTAGGTTGTATAGT.................................................................................................................... 22 1 3 228.67 686 72 221 243 30 84 36
.............................................................GAGGTAGTAGATTGTATAGTTA.................................................................................................................. 22 1 2 210.00 420 112 90 198 18 1 1
............................................................TGAGGTAGTAGATTGTACAGTT................................................................................................................... 22 1 3 205.33 616 274 180 146 12 3 1
............................................................TGAGGTAGTAGATCGTATAGTT................................................................................................................... 22 1 2 203.50 407 153 130 92 24 5 3
............................................................TGAGGTAGTCGATTGTATAGTT................................................................................................................... 22 1 2 185.00 370 29 33 257 49 2 0
............................................................TGAGGTAGTAGATTGTATAGTTGT................................................................................................................. 24 0 1 182.00 182 46 30 80 23 3 0
............................................................AGAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 181.50 363 133 120 87 23 0 0
............................................................TGAGGTAGTAGACTGTATAGTT................................................................................................................... 22 1 2 170.50 341 138 110 86 3 3 1
............................................................TGAGGTAGTAGATTGTATAGTTGA................................................................................................................. 24 1 1 168.00 168 24 32 90 20 2 0
............................................................TGAGGTCGTAGATTGTATAGTT................................................................................................................... 22 1 2 148.50 297 20 21 217 35 4 0
............................................................TGAGGTAGTAGCTTGTATAGTT................................................................................................................... 22 1 4 141.50 566 59 50 403 39 10 5
............................................................TGAGGTAGTAGATTGTATAGAA................................................................................................................... 22 2 2 141.00 282 66 108 66 11 27 4
............................................................TGAGGTATTAGATTGTATAGTT................................................................................................................... 22 1 2 140.50 281 27 60 169 21 2 2
............................................................TGAGGTAGTAGATTGTGTGGTT................................................................................................................... 22 2 3 138.67 416 172 152 92 0 0 0
............................................................TGAGGTAGAAGATTGTATAGTT................................................................................................................... 22 1 2 138.00 276 123 93 53 7 0 0
............................................................TGAGGTAGTATATTGTATAGTT................................................................................................................... 22 1 2 131.00 262 35 52 159 16 0 0
............................................................TGAGGTAGTAGATTGTAAAGTT................................................................................................................... 22 1 2 130.50 261 108 97 52 4 0 0
............................................................TGAGGTAGTAGATTGTATATTT................................................................................................................... 22 1 2 124.00 248 44 41 143 18 1 1
............................................................TGATGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 123.50 247 47 47 133 19 1 0
............................................................TGAGGGAGTAGATTGTATAGTT................................................................................................................... 22 1 2 118.50 237 30 27 140 34 4 2
............................................................TGCGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 118.00 236 5 2 208 17 4 0
............................................................TGAGGTAGTAGATTATATAGTT................................................................................................................... 22 1 2 116.50 233 98 84 44 2 5 0
...........................................................CTGAGGTAGTAGATTGTATAGTTA.................................................................................................................. 24 2 2 115.50 231 44 52 93 41 1 0
............................................................TGAGGTAGTAGATTTTATAGTT................................................................................................................... 22 1 2 113.50 227 45 103 69 8 2 0
...........................................................GTGAGGTAGTAGGTTGTATAGTT................................................................................................................... 23 1 3 112.00 336 51 95 89 10 58 33
............................................................TGAGGAAGTAGATTGTATAGTT................................................................................................................... 22 1 2 111.00 222 49 61 72 35 5 0
............................................................TGAGGTAGTAGATTGTCTAGTT................................................................................................................... 22 1 2 110.50 221 19 24 155 21 2 0
............................................................TGAGGTAGTAGATTGTATGGT.................................................................................................................... 21 1 3 105.67 317 105 104 105 1 1 1
............................................................TGAGGCAGTAGATTGTATAGT.................................................................................................................... 21 1 2 102.50 205 40 45 82 23 9 6
............................................................TGAGTTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 102.00 204 22 22 137 22 0 1
............................................................TGTGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 96.00 192 71 56 47 15 1 2
..............................................................AGGTAGTAGATTGTATAGTTGT................................................................................................................. 22 0 1 95.00 95 3 0 75 14 3 0
............................................................TGAAGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 92.00 184 56 51 66 9 2 0
............................................................TGAGGTAGTAGATTGTATTGTT................................................................................................................... 22 1 2 88.00 176 67 50 58 1 0 0
............................................................TGAGGTAGTAGATTGTATAGGT................................................................................................................... 22 1 2 87.00 174 36 25 95 17 1 0
............................................................TGAGGTAATAGATTGTATAGTT................................................................................................................... 22 1 2 82.50 165 69 58 27 9 2 0
............................................................CGAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 78.50 157 54 49 42 10 1 1
............................................................TGAGGTACTAGATTGTATAGTT................................................................................................................... 22 1 2 78.50 157 43 46 56 10 1 1
............................................................TTAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 78.00 156 32 38 72 14 0 0
....................................................................................................................CTATACAATCTATTGCCTTCCT........................................................... 22 1 1 74.00 74 17 34 14 1 7 1
............................................................TGAGATAGTAGATTGTATAGTT................................................................................................................... 22 1 2 73.00 146 63 43 33 6 1 0
............................................................TGAGGTGGTAGATTGTATAGT.................................................................................................................... 21 1 2 72.50 145 44 29 59 11 1 1
............................................................TGAGGTTGTAGATTGTATAGTT................................................................................................................... 22 1 2 71.50 143 53 59 24 7 0 0
............................................................TGAGGTAGTAGATAGTATAGTT................................................................................................................... 22 1 2 70.50 141 52 52 32 4 1 0
..............................................................AGGTAGTAGATTGTATAGTT................................................................................................................... 20 0 2 68.50 137 3 6 110 15 3 0
............................................................TGAGGTAGTAGATTGAATAGTT................................................................................................................... 22 1 2 68.50 137 50 37 40 9 0 1
....................................................................................................................CTATACAACCTACTGCCTTCC............................................................ 21 2 2 67.00 134 28 57 35 12 1 1
............................................................TGAGGTAGTAGGTTGTATAGTTGT................................................................................................................. 24 1 2 67.00 134 16 20 86 10 2 0
............................................................TGAGGTAGTAAATTGTATAGTT................................................................................................................... 22 1 2 65.00 130 51 56 17 4 1 1
............................................................TGAGGTAGTAGATTGTGTAGT.................................................................................................................... 21 1 2 64.00 128 28 31 64 3 2 0
............................................................TGAGGTAGTAGTTTGTATAGT.................................................................................................................... 21 1 5 62.00 310 63 53 176 14 3 1
............................................................TGGGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 62.00 124 28 37 54 4 1 0
............................................................TGAGGTAGTAGATTGGATAGTT................................................................................................................... 22 1 2 62.00 124 25 16 69 11 0 3
............................................................TGCGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 61.50 123 3 2 106 12 0 0
............................................................TGAGGTAGTAGATTGTATAGAT................................................................................................................... 22 1 2 59.50 119 34 30 47 6 2 0
............................................................TGAGGTAGTAGATTGTATAATT................................................................................................................... 22 1 2 56.00 112 49 42 17 2 1 1
............................................................TGAGGTAGTCGATTGTATAGT.................................................................................................................... 21 1 2 56.00 112 5 7 86 13 0 1
............................................................GGAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 55.50 111 27 27 54 3 0 0
....................................................................................................................CTATACAACCTACTGCCTTCCT........................................................... 22 3 20 54.75 1095 257 525 225 68 16 4
............................................................TGAGGTAGTAGATTGCATAGT.................................................................................................................... 21 1 2 54.50 109 30 25 50 4 0 0
............................................................TGAGGTAGTGGATTGTATAGT.................................................................................................................... 21 1 2 54.00 108 32 35 33 7 1 0
............................................................TGAGGTAGTAGAATGTATAGTT................................................................................................................... 22 1 2 52.50 105 41 33 27 3 0 1
............................................................TGAGGTAGGAGATTGTATAGTT................................................................................................................... 22 1 3 52.33 157 31 22 86 15 3 0
............................................................TGAGGTAGTAGGTTGTGTGGTTGT................................................................................................................. 24 3 7 50.29 352 53 57 171 8 56 7
............................................................TGAGGCAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 50.00 100 7 15 58 20 0 0
............................................................TGAGGTAGTAGATTGTTTAGTT................................................................................................................... 22 1 4 49.00 196 69 60 59 6 1 1
............................................................TAAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 49.00 98 23 40 28 4 0 3
............................................................TGAGGTAGTTGATTGTATAGTT................................................................................................................... 22 1 4 48.00 192 72 52 56 9 3 0
............................................................TGAGGTAGCAGATTGTATAGT.................................................................................................................... 21 1 2 47.00 94 26 26 35 5 1 1
............................................................TGAGGTAGTAGATTCTATAGTT................................................................................................................... 22 1 2 46.50 93 27 31 28 6 0 1
............................................................TGAGGTAGTAGATCGTATAGT.................................................................................................................... 21 1 2 45.00 90 29 28 30 2 0 1
............................................................TGAGGTAGTAGATTGTATAGTAG.................................................................................................................. 23 1 1 45.00 45 3 1 34 7 0 0
............................................................TGACGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 44.00 88 25 30 21 8 2 2
..........................................................TCTGAGGTAGTAGATTGTATAGTT................................................................................................................... 24 2 2 42.50 85 4 11 56 11 3 0
............................................................TGAGCTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 42.50 85 25 20 33 4 3 0
.............................................................GAGGTAGTAGATTGTATAG..................................................................................................................... 19 0 2 42.00 84 6 7 60 9 2 0
............................................................TGAGGTAGTACATTGTATAGTT................................................................................................................... 22 1 2 40.50 81 29 18 26 6 2 0
............................................................TGAGGTAGTAGATTGTATAGC.................................................................................................................... 21 1 2 40.00 80 18 24 28 9 0 1
...........................................................CTGAGGTAGTAGATTGTATAG..................................................................................................................... 21 1 2 39.50 79 12 5 45 15 0 2
............................................................TGAGGTAGTAGATTGTGTAGTTA.................................................................................................................. 23 2 2 39.00 78 26 17 30 4 0 1
............................................................TGAGGTAGTAGATTGTATGGTTA.................................................................................................................. 23 2 3 38.00 114 24 22 63 5 0 0
............................................................TGAGGTAGTAGCTTGTATAGT.................................................................................................................... 21 1 4 37.25 149 11 13 103 19 2 1
............................................................TGAGGTAGTAGACTGTATAGT.................................................................................................................... 21 1 2 35.00 70 22 22 24 1 0 1
............................................................CGAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 35.00 70 13 13 33 10 1 0
............................................................AGAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 35.00 70 30 14 21 5 0 0
............................................................TGCGGTAGTAGATTGTATAG..................................................................................................................... 20 1 2 34.00 68 0 0 60 7 1 0
............................................................TGAGGTAGTAGATTGTATAT..................................................................................................................... 20 1 2 33.50 67 12 6 36 6 5 2
............................................................TGAGGTAGTAGATTTTATAGT.................................................................................................................... 21 1 2 32.50 65 10 28 20 7 0 0
............................................................TCAGGTAGTAGATTGTATAGTT................................................................................................................... 22 1 2 32.50 65 27 21 14 2 1 0
............................................................TGAGGTAGTAGATTGTACAGT.................................................................................................................... 21 1 3 31.67 95 26 25 41 2 0 1
............................................................TGAGGTAGCAGATTGTATAGTTA.................................................................................................................. 23 2 2 29.00 58 14 8 27 8 1 0
............................................................TGAGGTAGTAGATTGTATAGTG................................................................................................................... 22 1 2 28.50 57 5 6 32 4 7 3
............................................................TGATGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 28.50 57 4 10 39 4 0 0
............................................................TGAGGTGGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 28.00 56 15 4 30 7 0 0
............................................................TGAGGTCGTAGATTGTATAGT.................................................................................................................... 21 1 2 28.00 56 3 2 43 8 0 0
............................................................TGAGGTAGTAGATTGT......................................................................................................................... 16 0 2 28.00 56 5 10 36 0 4 1
............................................................TGAGGTAGTAGATTGTATAGTGA.................................................................................................................. 23 2 2 27.50 55 2 7 41 5 0 0
............................................................TAAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 27.50 55 15 19 17 3 0 1
............................................................TGGGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 27.50 55 11 9 32 3 0 0
............................................................TGAGGTAGTAGATTGTATCGT.................................................................................................................... 21 1 2 27.50 55 1 6 42 6 0 0
...........................................................GTGAGGTAGTAGGTTGTATAG..................................................................................................................... 21 1 3 27.00 81 5 6 52 6 7 5
............................................................TGAGGTAGTAGATTATATAGT.................................................................................................................... 21 1 2 27.00 54 18 17 17 1 1 0
............................................................TGAGGTAGTCGATTGTATAGTTA.................................................................................................................. 23 2 2 27.00 54 2 0 48 3 1 0
............................................................TGAGGTAGTAGTTTGTATAGTTA.................................................................................................................. 23 2 5 26.60 133 23 7 88 15 0 0
............................................................TGAGGTAGAAGATTGTATAGT.................................................................................................................... 21 1 2 25.50 51 15 22 12 2 0 0
............................................................TGAGGTAGTATATTGTATAGT.................................................................................................................... 21 1 2 25.00 50 7 7 30 6 0 0
............................................................TGAGGGAGTAGATTGTATAGT.................................................................................................................... 21 1 2 25.00 50 4 4 30 12 0 0
..............................................................AGGTAGTAGATTGTATAGTTG.................................................................................................................. 21 0 1 25.00 25 0 0 19 4 0 2
............................................................TGAGGTAGTAGATTGTATAGTTAG................................................................................................................. 24 2 2 24.50 49 8 7 30 3 1 0
............................................................TGAGGTAGTAGATTGTAAA...................................................................................................................... 19 1 2 24.50 49 7 17 12 0 9 4
............................................................TGAGGTATTAGATTGTATAGT.................................................................................................................... 21 1 2 24.00 48 6 10 28 4 0 0
............................................................TGAGGTAGTAGATTGTATGG..................................................................................................................... 20 1 3 23.67 71 23 38 9 1 0 0
.........................................................ATTTGAGGTAGTAGATTGTATAGTT................................................................................................................... 25 3 3 23.67 71 24 47 0 0 0 0
............................................................TGAGGTAGTAGATTGTATAGTTAC................................................................................................................. 24 2 2 23.50 47 16 16 13 2 0 0
............................................................TGAGGTAGTAGATCGTATAGTTA.................................................................................................................. 23 2 2 23.50 47 10 16 21 0 0 0
...............................................................GGTAGTAGATTGTATAGTT................................................................................................................... 19 0 2 23.50 47 9 13 3 0 16 6
............................................................TGAGGTAGTAGATTGTAAAGT.................................................................................................................... 21 1 2 23.50 47 15 21 8 2 1 0
............................................................TGAGGTAGTAGATTGTATACTT................................................................................................................... 22 1 2 23.00 46 7 6 29 3 1 0
............................................................TGAGGTAGTAGATTGTCTAGT.................................................................................................................... 21 1 2 23.00 46 5 5 31 4 0 1
............................................................TGAGGTAGTAGATTGCATAGTTA.................................................................................................................. 23 2 2 22.50 45 7 8 26 4 0 0
............................................................TGAGGTAGTAGATTGTATAGTCA.................................................................................................................. 23 2 2 22.50 45 12 5 18 6 1 3
............................................................TGAGGTAGTAGCTTGTATAGTTA.................................................................................................................. 23 2 4 21.50 86 6 2 65 13 0 0
............................................................TGAGGTAGTGGATTGTATAGTTA.................................................................................................................. 23 2 2 21.00 42 11 8 22 1 0 0
............................................................TGAGGAAGTAGATTGTATAGT.................................................................................................................... 21 1 2 21.00 42 7 8 13 10 1 3
............................................................TGAGGTAGTAGATTGTATATT.................................................................................................................... 21 1 2 20.50 41 11 12 15 2 1 0
............................................................TGAGGTAGTAGATTGTATAAT.................................................................................................................... 21 1 2 20.00 40 14 12 10 1 2 1
............................................................TGAGGTAGTAGATTGTGTGGT.................................................................................................................... 21 2 5 20.00 100 56 33 11 0 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAG.................................................................................................................. 23 2 4 19.75 79 0 1 64 10 3 1
............................................................TGAGGTAGTAGATTGTATT...................................................................................................................... 19 1 3 19.67 59 10 15 30 0 2 2
............................................................TGTGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 19.50 39 14 7 14 4 0 0
............................................................TGAAGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 19.00 38 7 8 20 3 0 0
............................................................TGAGGTAGTAGATGGTATAGTT................................................................................................................... 22 1 2 18.00 36 14 10 10 1 1 0
................................................................GTAGTAGATTGTATAGTT................................................................................................................... 18 0 2 18.00 36 8 16 4 0 8 0
............................................................AGAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 18.00 36 7 6 18 5 0 0
............................................................TGAGGTAGTAGGTTGTATGGTTGT................................................................................................................. 24 2 4 18.00 72 10 12 36 3 9 2
............................................................TGAGGTAATAGATTGTATAGT.................................................................................................................... 21 1 2 18.00 36 9 12 13 2 0 0
.............................................................GAGGTAGTAGATTGTATAGTTG.................................................................................................................. 22 0 1 17.00 17 0 1 16 0 0 0
............................................................TGAGGTAGTAGATTGTATAAA.................................................................................................................... 21 2 6 17.00 102 17 22 48 6 4 5
............................................................TGAGGTCGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 17.00 34 2 1 25 6 0 0
............................................................TGAGGTTGTAGATTGTATAGT.................................................................................................................... 21 1 2 17.00 34 10 11 9 3 0 1
............................................................TTAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 17.00 34 9 7 17 1 0 0
............................................................TGAGGTAGTAAATTGTATAGT.................................................................................................................... 21 1 2 17.00 34 11 14 8 0 1 0
............................................................TGAGGTAGTAGATTGTCTAGTTA.................................................................................................................. 23 2 2 16.50 33 0 1 26 6 0 0
.............................................................TAGGTAGTAGATTGTATAGTT................................................................................................................... 21 1 2 16.50 33 4 11 15 3 0 0
............................................................TGAGGTAGTAGATTGTATTGT.................................................................................................................... 21 1 2 16.50 33 8 6 16 3 0 0
............................................................TGAGGTAGTAGATTGTATAGCTA.................................................................................................................. 23 2 2 16.50 33 5 6 17 3 1 1
............................................................TGAGGTAGAAGATTGTATAGTTA.................................................................................................................. 23 2 2 16.50 33 9 6 18 0 0 0
............................................................TGAGGTAGGAGATTGTATAGT.................................................................................................................... 21 1 3 16.33 49 5 5 32 7 0 0
............................................................TGAGTTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 16.00 32 2 0 27 3 0 0
............................................................TGAGGTAGTAGATTGTATAGG.................................................................................................................... 21 1 2 16.00 32 4 3 22 2 0 1
............................................................TGAGGTAGTAGATTGGATAGT.................................................................................................................... 21 1 2 16.00 32 2 4 25 1 0 0
............................................................TGAGGTAGTAGATTGTAA....................................................................................................................... 18 1 4 15.75 63 9 14 34 1 4 1
............................................................TGAGTTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 15.00 30 4 3 20 3 0 0
............................................................TGAGGTAGTAGATAGTATAGT.................................................................................................................... 21 1 2 15.00 30 12 8 7 3 0 0
.................................................................TAGTAGATTGTATAGTT................................................................................................................... 17 0 4 14.75 59 9 21 13 1 15 0
............................................................TGAGGCAGTAGATTGTATAG..................................................................................................................... 20 1 2 14.50 29 0 1 20 7 0 1
............................................................TGAGGTATTAGATTGTATAGTTA.................................................................................................................. 23 2 2 14.50 29 1 2 24 1 1 0
............................................................TGAGGTAGTCGATTGTATAG..................................................................................................................... 20 1 2 14.50 29 0 0 26 3 0 0
..............................................................AGGTAGTAGATTGTATAGT.................................................................................................................... 19 0 2 14.50 29 2 5 18 3 1 0
............................................................TGAGATAGTAGATTGTATAGT.................................................................................................................... 21 1 2 14.00 28 12 7 8 1 0 0
............................................................TGAGGTAGTAGAATGTATAGT.................................................................................................................... 21 1 2 14.00 28 12 6 8 2 0 0
............................................................TGAGGGAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 14.00 28 0 1 17 10 0 0
............................................................TGAGGTACTAGATTGTATAGT.................................................................................................................... 21 1 2 13.50 27 3 4 17 2 1 0
............................................................TGATGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 13.50 27 4 4 15 4 0 0
..............................................................AGGTAGTAGATTGTATAGTTA.................................................................................................................. 21 1 2 13.50 27 0 0 23 4 0 0
............................................................TGAGGTAGTAGACTGTATAGTTA.................................................................................................................. 23 2 2 13.50 27 5 4 13 4 0 1
............................................................TGAGGTAGTAGATTGAATAGT.................................................................................................................... 21 1 2 13.50 27 7 7 12 1 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGTGGGGT............................................................................................................ 29 0 1 13.00 13 6 0 0 3 0 4
............................................................TGAGGAAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 12.50 25 2 1 14 8 0 0
............................................................TGAGGTAGTAGATTGTATATTTA.................................................................................................................. 23 2 2 12.50 25 1 0 22 2 0 0
............................................................TGAGGTAGTAGATTGTAAAGTTA.................................................................................................................. 23 2 2 12.00 24 5 6 11 1 0 1
............................................................TGAGGTAGTAGATTCTATAGT.................................................................................................................... 21 1 2 11.50 23 6 4 8 3 2 0
...........................................................CTGAGGTAGTAGATTGTATAGTTG.................................................................................................................. 24 1 1 11.00 11 2 0 9 0 0 0
....................................................................................................................CTATACAATCTATTGCCTTCC............................................................ 21 0 1 11.00 11 1 3 6 0 0 1
............................................................TGAGGTAGTGTATTGTATAGTT................................................................................................................... 22 2 2 11.00 22 8 11 3 0 0 0
............................................................TGAGGTAGTAGATTGTATCGTTA.................................................................................................................. 23 2 2 11.00 22 0 0 20 2 0 0
.............................................................GAGGTAGTAGATTGTATA...................................................................................................................... 18 0 2 11.00 22 0 5 15 2 0 0
............................................................TGAGGTAGTAGATTGTATTT..................................................................................................................... 20 2 12 10.92 131 2 1 116 11 1 0
............................................................GGAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 10.50 21 6 8 5 1 1 0
............................................................TTAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 10.50 21 1 3 15 2 0 0
............................................................TGAGGTAGTAGATTGTATAGTTCT................................................................................................................. 24 1 2 10.50 21 10 10 1 0 0 0
...........................................................TTGAGGTAGTAGATTGTATAGT.................................................................................................................... 22 1 3 10.33 31 1 4 25 1 0 0
.............................................................GAGGTAGTAGATTGTATAGTTAA................................................................................................................. 23 2 3 10.00 30 6 5 8 11 0 0
............................................................TGAGGTAGTAGATTGTACAGTTA.................................................................................................................. 23 2 3 10.00 30 5 11 13 1 0 0
............................................................TGAGGTAGTAGATTGTGTAG..................................................................................................................... 20 1 2 10.00 20 3 6 9 2 0 0
............................................................TGAGGTAGTAGATTGTATAGTAAA................................................................................................................. 24 3 6 9.83 59 17 18 18 4 1 1
............................................................TGAAGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 9.50 19 2 8 8 1 0 0
............................................................TGAGGTAGTAGATTGTATGGTA................................................................................................................... 22 2 4 9.50 38 10 19 9 0 0 0
...............................................................TGTAGTAGATTGTATAGTT................................................................................................................... 19 1 5 9.40 47 6 8 33 0 0 0
...........................................................CTGAGGTAGTAGATTGTATAGTA................................................................................................................... 23 2 2 9.00 18 2 5 7 3 1 0
.............................................................GAGGTAGTAGATTGTATAGTA................................................................................................................... 21 1 2 9.00 18 4 2 12 0 0 0
............................................................TGAGCTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 9.00 18 7 6 5 0 0 0
............................................................TGAGGTAGTAGATTATATAGTTA.................................................................................................................. 23 2 2 9.00 18 3 7 6 1 1 0
............................................................TGAGGTAGTAGAGTGTATAGTT................................................................................................................... 22 1 2 9.00 18 6 4 7 1 0 0
....................................................................................................................CTATACAATCTATTGCCTTCCTT.......................................................... 23 1 1 9.00 9 1 3 4 0 1 0
...............................................................GGTAGTAGATTGTATAGTTGA................................................................................................................. 21 1 1 9.00 9 0 0 8 1 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGTAG............................................................................................................... 26 1 2 9.00 18 4 11 1 2 0 0
..........................................................AGTGAGGTAGTAGGTTGTAT....................................................................................................................... 20 1 1 9.00 9 0 0 8 1 0 0
............................................................TGAGGTAGTTGATTGTATAGT.................................................................................................................... 21 1 4 8.50 34 7 8 16 2 0 1
............................................................TGTGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 8.50 17 4 4 7 2 0 0
............................................................TGAGGTAGTACATTGTATAGT.................................................................................................................... 21 1 2 8.50 17 2 4 9 0 1 1
.............................................................GAGGTAGTAGATTGTAT....................................................................................................................... 17 0 2 8.50 17 1 2 14 0 0 0
............................................................TGAGGTAGTATATTGTATAGTTA.................................................................................................................. 23 2 2 8.50 17 1 3 10 3 0 0
............................................................TGAGGTAGTAAATTGTATAGTTA.................................................................................................................. 23 2 2 8.50 17 4 5 6 2 0 0
...........................................................TTGAGGTAGTAGATTGTATAGTT................................................................................................................... 23 1 3 8.33 25 3 7 13 2 0 0
............................................................TGAGGTAGGAGATTGTATAGTTA.................................................................................................................. 23 2 3 8.33 25 0 1 21 3 0 0
..............................................................TGGTAGTAGATTGTATAGTT................................................................................................................... 20 1 2 8.00 16 2 2 9 3 0 0
............................................................CGAGGTAGTAGATTGTATAG..................................................................................................................... 20 1 2 8.00 16 2 1 12 1 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGTGG............................................................................................................... 26 0 1 8.00 8 3 3 0 1 1 0
............................................................TGAGGTAGTAGATTTTATAGTTA.................................................................................................................. 23 2 2 8.00 16 5 4 7 0 0 0
....................................................................................................................CTATACAATCTATTGCCTTCCA........................................................... 22 1 1 8.00 8 0 3 3 0 2 0
............................................................TGAGGTAGTAGTTTGTATAG..................................................................................................................... 20 1 5 7.80 39 3 2 25 9 0 0
............................................................TGAGGTAGTAGATTGTATAGAAA.................................................................................................................. 23 3 10 7.80 78 11 32 26 8 1 0
............................................................TGAGGTAGTAGATTGGATAGTTA.................................................................................................................. 23 2 2 7.50 15 4 2 9 0 0 0
............................................................TGAGGTAGTAGATTGTATAATTA.................................................................................................................. 23 2 2 7.50 15 0 4 11 0 0 0
............................................................TGAGGTAGTAGATTGTAGAGTT................................................................................................................... 22 1 2 7.50 15 4 5 5 1 0 0
............................................................TGAGGTAGTAGATTGTATAGATA.................................................................................................................. 23 2 2 7.50 15 3 1 8 3 0 0
...........................................................GTGAGGTAGTAGATTGTATAGTT................................................................................................................... 23 0 1 7.00 7 3 4 0 0 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGAC................................................................................................................ 25 2 1 7.00 7 0 0 7 0 0 0
............................................................TGAGGTAGTAGATTGTTTAGT.................................................................................................................... 21 1 4 7.00 28 8 9 8 3 0 0
............................................................AGAGGTAGTAGATTGTATAG..................................................................................................................... 20 1 2 7.00 14 3 2 7 2 0 0
...........................................................CTGAGGTAGTAGATTGTAT....................................................................................................................... 19 1 2 7.00 14 0 0 12 2 0 0
............................................................GGAGGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 6.50 13 1 2 9 1 0 0
............................................................TGAGGTAGTAGATTGCATAG..................................................................................................................... 20 1 2 6.50 13 1 0 8 3 1 0
.............................................................GAGGTAGTAGATTGTATAGTTAT................................................................................................................. 23 1 2 6.50 13 0 3 9 1 0 0
............................................................TGAGGTAATAGATTGTATAGTTA.................................................................................................................. 23 2 2 6.50 13 1 4 7 1 0 0
..........................................................TCTGAGGTAGTAGATTGTATAGT.................................................................................................................... 23 2 2 6.50 13 0 1 12 0 0 0
............................................................TGAGGTAGTAGATTGTGTGGTTA.................................................................................................................. 23 3 4 6.50 26 9 8 9 0 0 0
............................................................TGACGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 6.50 13 6 1 4 2 0 0
..................................................................AGTAGATTGTATAGTT................................................................................................................... 16 0 6 6.33 38 4 12 11 2 9 0
............................................................TGAGGTAGTAGATTGTTTAGTTA.................................................................................................................. 23 2 4 6.25 25 7 1 15 2 0 0
........................................................AGTTTGAGGTAGTAGATTGTAT....................................................................................................................... 22 2 2 6.00 12 0 1 8 3 0 0
............................................................TGAGGTAGTAGATTGTATAGTCGAC................................................................................................................ 25 3 1 6.00 6 0 0 5 1 0 0
............................................................TCAGGTAGTAGATTGTATAGT.................................................................................................................... 21 1 2 6.00 12 3 5 4 0 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGTGGGGTAGT......................................................................................................... 32 0 1 6.00 6 0 0 0 0 6 0
..........................................................ATTGAGGTAGTAGATTGTATAGTT................................................................................................................... 24 1 1 6.00 6 1 3 0 2 0 0
............................................................TGGGGTAGTAGATTGTATAG..................................................................................................................... 20 1 2 6.00 12 0 0 7 5 0 0
............................................................TGAGGTACTAGATTGTATAGTTA.................................................................................................................. 23 2 2 6.00 12 1 0 11 0 0 0
............................................................TGAGGTAGTAGATTCTATAGTTA.................................................................................................................. 23 2 2 6.00 12 2 2 8 0 0 0
............................................................TGAGGTAGTGGATTGTATAG..................................................................................................................... 20 1 2 6.00 12 0 0 10 2 0 0
....................................................................................................................CTATACAACCTACTGCCTTCCTT.......................................................... 23 3 11 5.82 64 12 24 19 7 1 1
............................................................TGAGGTAGTAGATCGTATAG..................................................................................................................... 20 1 2 5.50 11 1 0 9 1 0 0
............................................................TGAGGTAGTAGAATGTATAGTTA.................................................................................................................. 23 2 2 5.50 11 2 2 5 2 0 0
............................................................TGAGGTAGTAGATTGTATTGTTA.................................................................................................................. 23 2 2 5.50 11 0 3 7 1 0 0
............................................................TGAGGTAGTAGATTGTATAGGTA.................................................................................................................. 23 2 2 5.50 11 0 1 8 2 0 0
................................................................GTAGTAGATTGTATAGT.................................................................................................................... 17 0 2 5.50 11 0 7 4 0 0 0
............................................................TGAGGTAGTAGATAGTATAGTTA.................................................................................................................. 23 2 2 5.50 11 1 5 4 1 0 0
............................................................TGAGGTAGTAGATTGAATAGTTA.................................................................................................................. 23 2 2 5.50 11 2 3 6 0 0 0
............................................................TGACGTAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 5.50 11 3 4 3 0 0 1
...........................................................CTGAGGTAGTAGATTGTATA...................................................................................................................... 20 1 2 5.50 11 1 0 8 2 0 0
............................................................TGAGTTAGTAGATTGTATAG..................................................................................................................... 20 1 2 5.00 10 0 0 7 3 0 0
............................................................TGAGGTAGTAGATTGTATATTA................................................................................................................... 22 2 2 5.00 10 0 0 7 3 0 0
............................................................TGAGGTAGTAGATTGTATAGTTGC................................................................................................................. 24 1 1 5.00 5 0 1 4 0 0 0
............................................................TGATGTAGTAGATTGTATAG..................................................................................................................... 20 1 2 5.00 10 1 1 8 0 0 0
............................................................TGAGATAGTAGATTGTATAGTTA.................................................................................................................. 23 2 2 5.00 10 2 2 6 0 0 0
............................................................TGAGGTAGTAGATTGTATAGAAG.................................................................................................................. 23 2 1 5.00 5 0 1 2 2 0 0
.................................................................TAGTAGATTGTATAGTTGAGG............................................................................................................... 21 1 1 5.00 5 0 0 5 0 0 0
............................................................TGAGGTCGTAGATTGTATAG..................................................................................................................... 20 1 2 5.00 10 0 0 9 1 0 0
............................................................TGAGGTAGTAGATTGTACAGTTG.................................................................................................................. 23 1 1 5.00 5 0 1 3 1 0 0
............................................................TGAGGTAGTAGATTGTATAGTTATT................................................................................................................ 25 2 2 5.00 10 5 4 1 0 0 0
...........................................................TTGAGGTAGTAGATTGTATAG..................................................................................................................... 21 1 3 4.67 14 0 0 11 3 0 0
.........................................................GTTTGAGGTAGTAGATTGTATA...................................................................................................................... 22 2 3 4.67 14 0 0 13 1 0 0
............................................................TGAGGGAGTAGATTGTATAG..................................................................................................................... 20 1 2 4.50 9 0 0 7 1 0 1
............................................................TGAGGTAGTAGATTGTATCG..................................................................................................................... 20 1 2 4.50 9 0 0 6 2 1 0
............................................................TGCGGTAGTAGGTTGTATAGTTG.................................................................................................................. 23 2 4 4.50 18 0 0 18 0 0 0
.................................................................TAGTAGATTGTATAGT.................................................................................................................... 16 0 4 4.50 18 2 7 1 0 7 1

Anti-sense strand reads

ACTACTACGTTGTATTTCTCTAACACGAGATAAGGGCTTCTTCTCTAACGAGATAGTCTCACTCCATCATCTAACATATCAACACCCCATCACTAAAATGGGACAAGTCCTCTATTGATATGTTAGATAACGGAAGGGACTCCTCATCTGAACGACGTAAAACAAAGATGGATCTATAATTTTGAGTCTTCTTAATT

*********************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR066810

testes		 SRR139076

testes
.................................................................................................................ATTGATATGTTAGATGACG................................................................. 19 1 2 0.50 1 1 0 0 0
..................................................................................................................TTGATATGTTAGATGATGGAAGT............................................................ 23 3 11 0.27 3 1 2 0 0
..................................................................................................................TTGATATGTTAGATAATGGAAT............................................................. 22 2 4 0.25 1 0 1 0 0
.................................................................................................................ATTGATATGTTAGATGACGGAGC............................................................. 23 3 4 0.25 1 1 0 0 0
..................................................................................................................TTGATATGTTAGATGACGGAGG............................................................. 22 2 4 0.25 1 1 0 0 0
..................................................................................................................TTGATATGTTAGATAACGGAGT............................................................. 22 2 4 0.25 1 0 0 1 0
...................................................................................................................TGATATGTTAGATGACGGA............................................................... 19 1 4 0.25 1 0 0 0 1
.................................................................................................................ATTGATATGTTAGAT..................................................................... 15 0 7 0.14 1 1 0 0 0

Generated: 09/01/2015 at 11:35 AM