ID:

ssc-let-7f-1

 Coordinate:

chrX:51801728-51801810 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.9 -48.2 -48.1
mature

  1. ssc-let-7f-2  chr3:44864810-44864831 +
  2. ssc-let-7f-1  chrX:51801782-51801803 -
star

Sense Strand Reads

ACCCTTCCAAGTAGCTGGCCTAAGTGGGCTGAAGATGAACACTAGTGCTCTGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACGGTAGTACACTTCCCCTCCGACGTGCTCTGTTTAGGTTCTCGTTCTGATTA

******************************************..(((((((((((((.((((((((((((((((((((((((((((........))))))))....)))))))))))))))))))))))))))).)))))...**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR066809

ovary		 SRR139075

testes		 SRR139076

testes		 SRR1274763

ovary		 SRR1274764

testes
.........................................................TGAGGTAGTAGATTGTATAGTT........................................................................................................ 22 0 2 510500.50 1021001 389483 347114 216412 28355 28159 11478
.........................................................TGAGGTAGTAGATTGTATAGT......................................................................................................... 21 0 2 101114.50 202229 67014 62401 56429 7240 5926 3219
.........................................................TGAGGTAGTAGATTGTATAGTTT....................................................................................................... 23 0 1 49581.00 49581 12529 11035 21494 3478 632 413
.........................................................TGAGGTAGTAGATTGTATAGTTA....................................................................................................... 23 1 2 45410.00 90820 23127 20430 39475 6500 693 595
.........................................................TGAGGTAGTAGATTGTATAG.......................................................................................................... 20 0 2 9266.50 18533 2650 1994 11048 2097 312 432
..........................................................GAGGTAGTAGATTGTATAGTT........................................................................................................ 21 0 2 2622.00 5244 1833 1987 1286 115 18 5
.........................................................TGAGGTAGTAGATTGTATAGTA........................................................................................................ 22 1 2 1709.00 3418 700 790 1541 149 194 44
.........................................................TGAGGTAGTAGATTGTATA........................................................................................................... 19 0 2 1685.00 3370 285 277 2357 268 58 125
.........................................................TGAGGTAGTAGATTGTAT............................................................................................................ 18 0 2 1483.00 2966 148 144 2405 143 50 76
........................................................CTGAGGTAGTAGATTGTATAGTT........................................................................................................ 23 1 2 1191.00 2382 754 787 618 200 15 8
.........................................................TGAGGTAGTAGATTGTATAGTAA....................................................................................................... 23 2 2 1175.00 2350 276 300 1456 272 30 16
.........................................................TGAGGTAGTAGATTGTATAGTTAA...................................................................................................... 24 2 3 1064.00 3192 564 555 1443 596 22 12
.........................................................TGAGGTAGTAGATTGTATAGA......................................................................................................... 21 1 2 972.50 1945 419 506 771 133 61 55
.........................................................TGAGGTAGTAGATTGTATGGTT........................................................................................................ 22 1 3 714.67 2144 859 655 603 21 5 1
.........................................................TGAGGTAGTAGATTGTATAGTTC....................................................................................................... 23 1 2 704.00 1408 639 569 159 30 6 5
.........................................................TGAGGTAGTAGATTGTA............................................................................................................. 17 0 2 702.00 1404 117 147 917 40 101 82
.........................................................TGCGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 499.50 999 22 30 866 68 9 4
..........................................................GAGGTAGTAGATTGTATAGT......................................................................................................... 20 0 2 470.00 940 279 292 339 21 7 2
.........................................................TGAGGCAGTAGATTGTATAGTT........................................................................................................ 22 1 2 439.50 879 227 211 300 71 47 23
.........................................................TGAGGTAGTAGATTGTGTAGTT........................................................................................................ 22 1 2 342.50 685 213 194 244 30 3 1
.........................................................TGAGGTAGTAGATTGTATAGTTAT...................................................................................................... 24 1 2 339.00 678 161 160 275 71 9 2
.........................................................TGAGGTAGTAGTTTGTATAGTT........................................................................................................ 22 1 5 322.00 1610 336 254 935 75 6 4
.........................................................TGAGGTAGTAGATTGTATAGTAT....................................................................................................... 23 1 1 312.00 312 21 20 234 34 2 1
.........................................................CGAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 310.50 621 231 207 145 35 2 1
..........................................................GAGGTAGTAGATTGTATAGTTT....................................................................................................... 22 0 1 308.00 308 57 61 167 21 0 2
.........................................................TGGGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 296.50 593 190 193 171 29 9 1
.........................................................TGAGGTGGTAGATTGTATAGTT........................................................................................................ 22 1 2 294.00 588 199 160 192 26 8 3
.........................................................TGAGGTAGTAGATTGTATAGTTTT...................................................................................................... 24 0 1 288.00 288 73 58 121 33 2 1
.........................................................TGAGGTAGTAGATTGTATAA.......................................................................................................... 20 1 2 284.00 568 78 102 333 37 11 7
........................................................CTGAGGTAGTAGATTGTATAGT......................................................................................................... 22 1 2 280.50 561 158 194 164 43 2 0
.........................................................TAAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 278.50 557 161 229 153 8 4 2
.........................................................TGAGGTAGCAGATTGTATAGTT........................................................................................................ 22 1 2 270.50 541 190 155 154 26 12 4
.........................................................TGAGGTAGTAGATTGCATAGTT........................................................................................................ 22 1 2 269.00 538 172 138 192 25 6 5
.........................................................TGAGGTAGTAGATTGTATAGTC........................................................................................................ 22 1 2 265.00 530 211 168 91 14 14 32
.........................................................TGAGGTAGTGGATTGTATAGTT........................................................................................................ 22 1 2 251.50 503 192 169 121 16 3 2
.........................................................TGAGGTAGTAGATTGTATAGCT........................................................................................................ 22 1 2 241.50 483 138 128 171 34 10 2
.........................................................TGAGGTAGTAGATTGTATCGTT........................................................................................................ 22 1 2 233.00 466 43 43 335 42 3 0
..........................................................GAGGTAGTAGATTGTATAGTTA....................................................................................................... 22 1 2 210.00 420 112 90 198 18 1 1
.........................................................TGAGGTAGTAGATTGTACAGTT........................................................................................................ 22 1 3 205.33 616 274 180 146 12 3 1
.........................................................TGAGGTAGTAGATCGTATAGTT........................................................................................................ 22 1 2 203.50 407 153 130 92 24 5 3
.........................................................TGAGGTAGTCGATTGTATAGTT........................................................................................................ 22 1 2 185.00 370 29 33 257 49 2 0
.........................................................AGAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 181.50 363 133 120 87 23 0 0
.........................................................TGAGGTAGTAGACTGTATAGTT........................................................................................................ 22 1 2 170.50 341 138 110 86 3 3 1
.........................................................TGAGGTCGTAGATTGTATAGTT........................................................................................................ 22 1 2 148.50 297 20 21 217 35 4 0
.........................................................TGAGGTAGTAGCTTGTATAGTT........................................................................................................ 22 1 4 141.50 566 59 50 403 39 10 5
.........................................................TGAGGTAGTAGATTGTATAGAA........................................................................................................ 22 2 2 141.00 282 66 108 66 11 27 4
.........................................................TGAGGTATTAGATTGTATAGTT........................................................................................................ 22 1 2 140.50 281 27 60 169 21 2 2
.........................................................TGAGGTAGTAGATTGTGTGGTT........................................................................................................ 22 2 3 138.67 416 172 152 92 0 0 0
.........................................................TGAGGTAGAAGATTGTATAGTT........................................................................................................ 22 1 2 138.00 276 123 93 53 7 0 0
.........................................................TGAGGTAGTATATTGTATAGTT........................................................................................................ 22 1 2 131.00 262 35 52 159 16 0 0
.........................................................TGAGGTAGTAGATTGTAAAGTT........................................................................................................ 22 1 2 130.50 261 108 97 52 4 0 0
........................................................CTGAGGTAGTAGATTGTATAGTTT....................................................................................................... 24 1 1 125.00 125 24 32 55 14 0 0
.........................................................TGAGGTAGTAGATTGTATATTT........................................................................................................ 22 1 2 124.00 248 44 41 143 18 1 1
.........................................................TGATGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 123.50 247 47 47 133 19 1 0
.........................................................TGAGGGAGTAGATTGTATAGTT........................................................................................................ 22 1 2 118.50 237 30 27 140 34 4 2
.........................................................TGCGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 118.00 236 5 2 208 17 4 0
.........................................................TGAGGTAGTAGATTATATAGTT........................................................................................................ 22 1 2 116.50 233 98 84 44 2 5 0
........................................................CTGAGGTAGTAGATTGTATAGTTA....................................................................................................... 24 2 2 115.50 231 44 52 93 41 1 0
.........................................................TGAGGTAGTAGATTTTATAGTT........................................................................................................ 22 1 2 113.50 227 45 103 69 8 2 0
.........................................................TGAGGAAGTAGATTGTATAGTT........................................................................................................ 22 1 2 111.00 222 49 61 72 35 5 0
.........................................................TGAGGTAGTAGATTGTCTAGTT........................................................................................................ 22 1 2 110.50 221 19 24 155 21 2 0
.........................................................TGAGGTAGTAGATTGTATGGT......................................................................................................... 21 1 3 105.67 317 105 104 105 1 1 1
.........................................................TGAGGCAGTAGATTGTATAGT......................................................................................................... 21 1 2 102.50 205 40 45 82 23 9 6
.........................................................TGAGTTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 102.00 204 22 22 137 22 0 1
.........................................................TGTGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 96.00 192 71 56 47 15 1 2
.........................................................TGAAGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 92.00 184 56 51 66 9 2 0
.........................................................TGCGGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 92.00 92 0 1 79 11 1 0
.........................................................TGAGGTAGTAGATTGTATTGTT........................................................................................................ 22 1 2 88.00 176 67 50 58 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGGT........................................................................................................ 22 1 2 87.00 174 36 25 95 17 1 0
.........................................................TGAGGTAGTAGATTGTATAGTTAAA..................................................................................................... 25 2 1 87.00 87 35 23 22 5 0 2
.........................................................TGAGGTAATAGATTGTATAGTT........................................................................................................ 22 1 2 82.50 165 69 58 27 9 2 0
.........................................................TGAGGTACTAGATTGTATAGTT........................................................................................................ 22 1 2 78.50 157 43 46 56 10 1 1
.........................................................CGAGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 78.50 157 54 49 42 10 1 1
.........................................................TTAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 78.00 156 32 38 72 14 0 0
.........................................................TGAGATAGTAGATTGTATAGTT........................................................................................................ 22 1 2 73.00 146 63 43 33 6 1 0
.........................................................TGAGGTGGTAGATTGTATAGT......................................................................................................... 21 1 2 72.50 145 44 29 59 11 1 1
.........................................................TGAGGTTGTAGATTGTATAGTT........................................................................................................ 22 1 2 71.50 143 53 59 24 7 0 0
.........................................................TGAGGTAGTAGATAGTATAGTT........................................................................................................ 22 1 2 70.50 141 52 52 32 4 1 0
.........................................................TGAGGTAGTAGATTGAATAGTT........................................................................................................ 22 1 2 68.50 137 50 37 40 9 0 1
...........................................................AGGTAGTAGATTGTATAGTT........................................................................................................ 20 0 2 68.50 137 3 6 110 15 3 0
.........................................................TGAGGTAGTAAATTGTATAGTT........................................................................................................ 22 1 2 65.00 130 51 56 17 4 1 1
.........................................................TGAGGTAGTAGATTGTGTAGT......................................................................................................... 21 1 2 64.00 128 28 31 64 3 2 0
......................................ACACTAGTGCTCTGTGGGA.............................................................................................................................. 19 0 1 64.00 64 1 4 49 9 1 0
.........................................................TGAGGTAGTAGATTGGATAGTT........................................................................................................ 22 1 2 62.00 124 25 16 69 11 0 3
.........................................................TGAGGTAGTAGTTTGTATAGT......................................................................................................... 21 1 5 62.00 310 63 53 176 14 3 1
.........................................................TGGGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 62.00 124 28 37 54 4 1 0
.........................................................TGAGGTAGTAGATTGTATAGTTTA...................................................................................................... 24 1 2 62.00 124 24 39 42 12 3 4
.........................................................TGCGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 61.50 123 3 2 106 12 0 0
.........................................................TGAGGTAGTAGATTGTGTGGTTT....................................................................................................... 23 2 2 60.50 121 51 48 20 2 0 0
.........................................................TGAGGTAGTAGATTGTATAGAT........................................................................................................ 22 1 2 59.50 119 34 30 47 6 2 0
.........................................................TGAGGTAGTAGATTGTATGGTTT....................................................................................................... 23 1 2 57.00 114 35 41 37 1 0 0
.........................................................TGAGGTAGTCGATTGTATAGT......................................................................................................... 21 1 2 56.00 112 5 7 86 13 0 1
.........................................................TGAGGTAGTAGATTGTATAATT........................................................................................................ 22 1 2 56.00 112 49 42 17 2 1 1
.........................................................GGAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 55.50 111 27 27 54 3 0 0
.........................................................TGAGGTAGTAGATTGCATAGT......................................................................................................... 21 1 2 54.50 109 30 25 50 4 0 0
.........................................................TGAGGTAGTGGATTGTATAGT......................................................................................................... 21 1 2 54.00 108 32 35 33 7 1 0
.........................................................TGAGGTAGTAGAATGTATAGTT........................................................................................................ 22 1 2 52.50 105 41 33 27 3 0 1
.........................................................TGAGGTAGGAGATTGTATAGTT........................................................................................................ 22 1 3 52.33 157 31 22 86 15 3 0
........................................................ATGAGGTAGTAGATTGTATAGTT........................................................................................................ 23 0 1 52.00 52 27 20 4 1 0 0
.........................................................TGAGGCAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 50.00 100 7 15 58 20 0 0
...........................................................................................................CTATACAGTCTACTGTCTTTCT...................................................... 22 1 1 50.00 50 15 15 4 0 7 9
.........................................................TGAGGTAGTAGATTGTTTAGTT........................................................................................................ 22 1 4 49.00 196 69 60 59 6 1 1
.........................................................TGAGGCAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 49.00 49 5 6 32 6 0 0
.........................................................TAAGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 49.00 98 23 40 28 4 0 3
.........................................................TGAGGTAGTTGATTGTATAGTT........................................................................................................ 22 1 4 48.00 192 72 52 56 9 3 0
.........................................................TGAGGTAGCAGATTGTATAGT......................................................................................................... 21 1 2 47.00 94 26 26 35 5 1 1
.........................................................TGAGGTAGTAGATTCTATAGTT........................................................................................................ 22 1 2 46.50 93 27 31 28 6 0 1
.........................................................TGAGGTAGTAGATCGTATAGT......................................................................................................... 21 1 2 45.00 90 29 28 30 2 0 1
.........................................................TGACGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 44.00 88 25 30 21 8 2 2
.........................................................TGAGGTAGTAGATTGTGTAGTTT....................................................................................................... 23 1 1 44.00 44 7 10 23 4 0 0
.........................................................TGAGGTAGTAGATTGTATCGTTT....................................................................................................... 23 1 1 44.00 44 2 2 35 5 0 0
.......................................................TCTGAGGTAGTAGATTGTATAGTT........................................................................................................ 24 2 2 42.50 85 4 11 56 11 3 0
.........................................................TGAGCTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 42.50 85 25 20 33 4 3 0
..........................................................GAGGTAGTAGATTGTATAG.......................................................................................................... 19 0 2 42.00 84 6 7 60 9 2 0
.........................................................TGAGGTAGTACATTGTATAGTT........................................................................................................ 22 1 2 40.50 81 29 18 26 6 2 0
.........................................................TGAGGTAGTAGATTGTATAGC......................................................................................................... 21 1 2 40.00 80 18 24 28 9 0 1
........................................................CTGAGGTAGTAGATTGTATAG.......................................................................................................... 21 1 2 39.50 79 12 5 45 15 0 2
.........................................................TGAGGTAGTAGATTGTGTAGTTA....................................................................................................... 23 2 2 39.00 78 26 17 30 4 0 1
.........................................................TGAGGTAGTAGATTGTATGGTTA....................................................................................................... 23 2 3 38.00 114 24 22 63 5 0 0
.........................................................TGAGGTAGTAGCTTGTATAGT......................................................................................................... 21 1 4 37.25 149 11 13 103 19 2 1
.........................................................TGAGGTAGTAGATTGTATAGTTTC...................................................................................................... 24 1 1 37.00 37 2 7 25 3 0 0
.........................................................TGAGGTGGTAGATTGTATAGTTT....................................................................................................... 23 1 1 36.00 36 11 3 20 2 0 0
.........................................................TGAGGTAGCAGATTGTATAGTTT....................................................................................................... 23 1 1 36.00 36 4 4 20 7 0 1
.........................................................CGAGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 35.00 70 13 13 33 10 1 0
.........................................................TGAGGTAGTAGACTGTATAGT......................................................................................................... 21 1 2 35.00 70 22 22 24 1 0 1
.........................................................TGAGGTAGTAGATTGTATAGTGT....................................................................................................... 23 1 1 35.00 35 1 5 28 1 0 0
.........................................................AGAGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 35.00 70 30 14 21 5 0 0
.........................................................TGCGGTAGTAGATTGTATAG.......................................................................................................... 20 1 2 34.00 68 0 0 60 7 1 0
.........................................................TGAGGTAGTCGATTGTATAGTTT....................................................................................................... 23 1 1 34.00 34 0 1 27 6 0 0
.........................................................TGAGGTAGTAGATTGTATAT.......................................................................................................... 20 1 2 33.50 67 12 6 36 6 5 2
.........................................................TGAGGTAGTAGATTTTATAGT......................................................................................................... 21 1 2 32.50 65 10 28 20 7 0 0
.........................................................TCAGGTAGTAGATTGTATAGTT........................................................................................................ 22 1 2 32.50 65 27 21 14 2 1 0
.........................................................TGAGGTAGTAGATTGTACAGT......................................................................................................... 21 1 3 31.67 95 26 25 41 2 0 1
.........................................................TGAGGTAGTAGATTGTATAGCTT....................................................................................................... 23 1 1 31.00 31 4 3 18 6 0 0
.........................................................CGAGGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 30.00 30 8 4 16 2 0 0
.........................................................TGAGGTAGCAGATTGTATAGTTA....................................................................................................... 23 2 2 29.00 58 14 8 27 8 1 0
.........................................................TGAGGTAGTAGATTGTATAGTG........................................................................................................ 22 1 2 28.50 57 5 6 32 4 7 3
.........................................................TGATGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 28.50 57 4 10 39 4 0 0
.........................................................TGAGGTAGTAGATTGT.............................................................................................................. 16 0 2 28.00 56 5 10 36 0 4 1
.........................................................TGAGGTCGTAGATTGTATAGT......................................................................................................... 21 1 2 28.00 56 3 2 43 8 0 0
.........................................................TGAGGTGGTAGATTGTATAGTTA....................................................................................................... 23 2 2 28.00 56 15 4 30 7 0 0
.........................................................TGAGGTAGTAGATTGTATCGT......................................................................................................... 21 1 2 27.50 55 1 6 42 6 0 0
.........................................................TGAGGTAGTAGATTGTATAGTGA....................................................................................................... 23 2 2 27.50 55 2 7 41 5 0 0
.........................................................TAAGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 27.50 55 15 19 17 3 0 1
.........................................................TGGGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 27.50 55 11 9 32 3 0 0
.........................................................TGAGGTCGTAGATTGTATAGTTT....................................................................................................... 23 1 1 27.00 27 1 1 20 5 0 0
.........................................................TGAGGTAGTAGATTATATAGT......................................................................................................... 21 1 2 27.00 54 18 17 17 1 1 0
.........................................................TGAGGGAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 27.00 27 1 3 18 5 0 0
.........................................................TGAGGTAGTCGATTGTATAGTTA....................................................................................................... 23 2 2 27.00 54 2 0 48 3 1 0
.........................................................TGAGGTAGTAGTTTGTATAGTTA....................................................................................................... 23 2 5 26.60 133 23 7 88 15 0 0
.........................................................TGAGGTAGTAGATTGTATAGGTT....................................................................................................... 23 1 1 26.00 26 4 5 14 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGTCT....................................................................................................... 23 1 1 26.00 26 7 5 11 2 1 0
.........................................................TGAGGTAGTAGTTTGTATAGTTT....................................................................................................... 23 1 4 25.50 102 9 5 79 9 0 0
.........................................................TGAGGTAGAAGATTGTATAGT......................................................................................................... 21 1 2 25.50 51 15 22 12 2 0 0
.........................................................TGAGGGAGTAGATTGTATAGT......................................................................................................... 21 1 2 25.00 50 4 4 30 12 0 0
.........................................................TGAGGTAGTATATTGTATAGT......................................................................................................... 21 1 2 25.00 50 7 7 30 6 0 0
.........................................................TGAGGTAGTAGATTGCATAGTTT....................................................................................................... 23 1 1 25.00 25 3 2 15 4 0 1
.........................................................TAAGGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 25.00 25 5 7 13 0 0 0
.........................................................TGGGGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 25.00 25 6 6 13 0 0 0
.........................................................TGAGGTAGTAGATTGTAAA........................................................................................................... 19 1 2 24.50 49 7 17 12 0 9 4
.........................................................TGAGGTAGTAGATTGTATAGTTAG...................................................................................................... 24 2 2 24.50 49 8 7 30 3 1 0
.........................................................TGAGGTAGTGGATTGTATAGTTT....................................................................................................... 23 1 1 24.00 24 3 6 13 2 0 0
.........................................................TGAGGTATTAGATTGTATAGT......................................................................................................... 21 1 2 24.00 48 6 10 28 4 0 0
.........................................................TGAGTTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 24.00 24 0 1 14 9 0 0
.........................................................TGAGGTAGTAGATTGTATGG.......................................................................................................... 20 1 3 23.67 71 23 38 9 1 0 0
......................................................ATTTGAGGTAGTAGATTGTATAGTT........................................................................................................ 25 3 3 23.67 71 24 47 0 0 0 0
............................................................GGTAGTAGATTGTATAGTT........................................................................................................ 19 0 2 23.50 47 9 13 3 0 16 6
.........................................................TGAGGTAGTAGATTGTATAGTTAC...................................................................................................... 24 2 2 23.50 47 16 16 13 2 0 0
.........................................................TGAGGTAGTAGATTGTAAAGT......................................................................................................... 21 1 2 23.50 47 15 21 8 2 1 0
.........................................................TGAGGTAGTAGATCGTATAGTTA....................................................................................................... 23 2 2 23.50 47 10 16 21 0 0 0
.........................................................TGAGGTAGTAGATTGTATACTT........................................................................................................ 22 1 2 23.00 46 7 6 29 3 1 0
.........................................................TGATGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 23.00 23 3 0 17 3 0 0
.........................................................TGAGGTAGGAGATTGTATAGTTT....................................................................................................... 23 1 1 23.00 23 4 1 15 3 0 0
.........................................................TGAGGTAGTAGATTGTCTAGT......................................................................................................... 21 1 2 23.00 46 5 5 31 4 0 1
.........................................................TGAGGTAGTAGATTGCATAGTTA....................................................................................................... 23 2 2 22.50 45 7 8 26 4 0 0
.........................................................TGAGGTAGTAGATTGTATAGTCA....................................................................................................... 23 2 2 22.50 45 12 5 18 6 1 3
.........................................................TGAGGTAGTAGCTTGTATAGTTA....................................................................................................... 23 2 4 21.50 86 6 2 65 13 0 0
.........................................................TGAGGTAGTGGATTGTATAGTTA....................................................................................................... 23 2 2 21.00 42 11 8 22 1 0 0
.........................................................TGAGGAAGTAGATTGTATAGT......................................................................................................... 21 1 2 21.00 42 7 8 13 10 1 3
.........................................................TGAGGTAGTAGATTGTATATT......................................................................................................... 21 1 2 20.50 41 11 12 15 2 1 0
.........................................................TGAGGTAGTAGATTGTGTGGT......................................................................................................... 21 2 5 20.00 100 56 33 11 0 0 0
...............................................................................TTAGGGTCATACCCCATCTTGGAGA............................................................................... 25 0 1 20.00 20 12 8 0 0 0 0
.........................................................TGAGGTAGTAGATTGTATAAT......................................................................................................... 21 1 2 20.00 40 14 12 10 1 2 1
.........................................................TGAGGTATTAGATTGTATAGTTT....................................................................................................... 23 1 1 20.00 20 1 0 17 2 0 0
.........................................................TGAGGTAGTAGCTTGTATAGTTT....................................................................................................... 23 1 3 19.67 59 1 2 50 6 0 0
.........................................................TGAGGTAGTAGATTGTATT........................................................................................................... 19 1 3 19.67 59 10 15 30 0 2 2
.........................................................TGTGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 19.50 39 14 7 14 4 0 0
.........................................................TGAAGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 19.00 38 7 8 20 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTCGAC.................................................................................................... 26 3 1 19.00 19 0 0 16 3 0 0
.........................................................TGAGGTAGTAGATCGTATAGTTT....................................................................................................... 23 1 1 18.00 18 0 2 15 1 0 0
.............................................................GTAGTAGATTGTATAGTT........................................................................................................ 18 0 2 18.00 36 8 16 4 0 8 0
.........................................................TGAGGTAATAGATTGTATAGT......................................................................................................... 21 1 2 18.00 36 9 12 13 2 0 0
.........................................................TGAGGTAGTAGATGGTATAGTT........................................................................................................ 22 1 2 18.00 36 14 10 10 1 1 0
.........................................................TGAGGAAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 18.00 18 1 2 8 7 0 0
.........................................................AGAGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 18.00 36 7 6 18 5 0 0
............................................................GGTAGTAGATTGTATAGTTTGA..................................................................................................... 22 1 1 18.00 18 0 0 18 0 0 0
.........................................................TGAGGTAGTAGATTGTATAAA......................................................................................................... 21 2 6 17.00 102 17 22 48 6 4 5
.........................................................TGAGGTCGTAGATTGTATAGTTA....................................................................................................... 23 2 2 17.00 34 2 1 25 6 0 0
.........................................................TTAGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 17.00 34 9 7 17 1 0 0
.........................................................TGAGGTTGTAGATTGTATAGT......................................................................................................... 21 1 2 17.00 34 10 11 9 3 0 1
.........................................................TGAGGTAGTAAATTGTATAGT......................................................................................................... 21 1 2 17.00 34 11 14 8 0 1 0
..........................................................TAGGTAGTAGATTGTATAGTT........................................................................................................ 21 1 2 16.50 33 4 11 15 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGCTA....................................................................................................... 23 2 2 16.50 33 5 6 17 3 1 1
.........................................................TGAGGTAGTAGATTGTCTAGTTA....................................................................................................... 23 2 2 16.50 33 0 1 26 6 0 0
.........................................................TGAGGTAGAAGATTGTATAGTTA....................................................................................................... 23 2 2 16.50 33 9 6 18 0 0 0
.........................................................TGAGGTAGTAGATTGTATTGT......................................................................................................... 21 1 2 16.50 33 8 6 16 3 0 0
.........................................................TGAGGTAGGAGATTGTATAGT......................................................................................................... 21 1 3 16.33 49 5 5 32 7 0 0
.........................................................TGAGTTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 16.00 32 2 0 27 3 0 0
...........................................................AGGTAGTAGATTGTATAGTTT....................................................................................................... 21 0 1 16.00 16 0 0 14 2 0 0
.........................................................TGAGGTAGTAGATTGTATAGG......................................................................................................... 21 1 2 16.00 32 4 3 22 2 0 1
.........................................................TGAGGTAGTAGATTGGATAGT......................................................................................................... 21 1 2 16.00 32 2 4 25 1 0 0
.........................................................TGAGGTAGTAGATTGTAA............................................................................................................ 18 1 4 15.75 63 9 14 34 1 4 1
.........................................................TGAGTTAGTAGATTGTATAGT......................................................................................................... 21 1 2 15.00 30 4 3 20 3 0 0
...............................................................................TTAGGGTCATACCCCATCTTGGA................................................................................. 23 0 1 15.00 15 10 5 0 0 0 0
.........................................................AGAGGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 15.00 15 9 1 3 2 0 0
.........................................................TGAGGTAGTAGATTGTAAAGTTT....................................................................................................... 23 1 1 15.00 15 3 3 7 2 0 0
.........................................................TGAGGTAGTAGATAGTATAGT......................................................................................................... 21 1 2 15.00 30 12 8 7 3 0 0
..............................................................TAGTAGATTGTATAGTT........................................................................................................ 17 0 4 14.75 59 9 21 13 1 15 0
...........................................................AGGTAGTAGATTGTATAGT......................................................................................................... 19 0 2 14.50 29 2 5 18 3 1 0
.........................................................TGAGGCAGTAGATTGTATAG.......................................................................................................... 20 1 2 14.50 29 0 1 20 7 0 1
.........................................................TGAGGTATTAGATTGTATAGTTA....................................................................................................... 23 2 2 14.50 29 1 2 24 1 1 0
.........................................................TGAGGTAGTCGATTGTATAG.......................................................................................................... 20 1 2 14.50 29 0 0 26 3 0 0
.........................................................TGAGGTAGTAGACTGTATAGTTT....................................................................................................... 23 1 1 14.00 14 1 6 4 3 0 0
.........................................................TGAGATAGTAGATTGTATAGT......................................................................................................... 21 1 2 14.00 28 12 7 8 1 0 0
...........................................................................................................CTATACAGTCTACTGTCTTTC....................................................... 21 0 1 14.00 14 4 9 0 0 0 1
.........................................................TGAGGTAGAAGATTGTATAGTTT....................................................................................................... 23 1 1 14.00 14 3 5 6 0 0 0
.........................................................TGAGGGAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 14.00 28 0 1 17 10 0 0
.........................................................TGAGGTAGTAGATTGTACAGTTT....................................................................................................... 23 1 2 14.00 28 10 7 9 2 0 0
.........................................................TGAGGTAGTAGAATGTATAGT......................................................................................................... 21 1 2 14.00 28 12 6 8 2 0 0
.........................................................TGAGGTACTAGATTGTATAGT......................................................................................................... 21 1 2 13.50 27 3 4 17 2 1 0
...........................................................AGGTAGTAGATTGTATAGTTA....................................................................................................... 21 1 2 13.50 27 0 0 23 4 0 0
.........................................................TGATGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 13.50 27 4 4 15 4 0 0
.........................................................TGAGGTAGTAGATTGAATAGT......................................................................................................... 21 1 2 13.50 27 7 7 12 1 0 0
.........................................................TGAGGTAGTAGACTGTATAGTTA....................................................................................................... 23 2 2 13.50 27 5 4 13 4 0 1
.........................................................TGAGGTAGTTGATTGTATAGTTT....................................................................................................... 23 1 1 13.00 13 3 0 9 1 0 0
.........................................................TGAGGTAGTAGATTGTTTAGTTT....................................................................................................... 23 1 1 13.00 13 5 3 4 1 0 0
.......................................CACTAGTGCTCTGTGGGA.............................................................................................................................. 18 0 1 13.00 13 0 2 8 0 2 1
.........................................................TGAGGTAGTAGATTGTATATTTA....................................................................................................... 23 2 2 12.50 25 1 0 22 2 0 0
.........................................................TGAGGAAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 12.50 25 2 1 14 8 0 0
.........................................................TGAGGTAGTAGATTGTATATTTT....................................................................................................... 23 1 1 12.00 12 2 2 8 0 0 0
.........................................................TGAGGTAGTAGATTGTAAAGTTA....................................................................................................... 23 2 2 12.00 24 5 6 11 1 0 1
.........................................................TGAGGTAGTAGATTGTGTGGTTTT...................................................................................................... 24 2 1 12.00 12 6 6 0 0 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTTTT..................................................................................................... 25 1 1 12.00 12 0 4 6 1 1 0
.........................................................TGAGGTTGTAGATTGTATAGTTT....................................................................................................... 23 1 1 12.00 12 3 2 5 2 0 0
.........................................................TGAGGTAGTAGATTCTATAGT......................................................................................................... 21 1 2 11.50 23 6 4 8 3 2 0
.........................................................TGAGGTAGTAGATTTTATAGTTT....................................................................................................... 23 1 1 11.00 11 1 5 3 2 0 0
..........................................................GAGGTAGTAGATTGTATA........................................................................................................... 18 0 2 11.00 22 0 5 15 2 0 0
.........................................................TGAGGTAGTAGATTATATAGTTT....................................................................................................... 23 1 1 11.00 11 4 2 3 1 1 0
.........................................................TGAGGTACTAGATTGTATAGTTT....................................................................................................... 23 1 1 11.00 11 2 1 4 4 0 0
.........................................................TGAGGTAGTAGATTGTATCGTTA....................................................................................................... 23 2 2 11.00 22 0 0 20 2 0 0
.........................................................TGAGGTAGTGTATTGTATAGTT........................................................................................................ 22 2 2 11.00 22 8 11 3 0 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTCCA..................................................................................................... 25 2 1 11.00 11 4 6 1 0 0 0
.........................................................TGAGGTAGTAGATTGTATTT.......................................................................................................... 20 2 12 10.92 131 2 1 116 11 1 0
.........................................................GGAGGTAGTAGATTGTATAGT......................................................................................................... 21 1 2 10.50 21 6 8 5 1 1 0
.........................................................TGAGGTAGTAGATTGTATAGTTCT...................................................................................................... 24 1 2 10.50 21 10 10 1 0 0 0
.........................................................TTAGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 10.50 21 1 3 15 2 0 0
........................................................TTGAGGTAGTAGATTGTATAGT......................................................................................................... 22 1 3 10.33 31 1 4 25 1 0 0
.........................................................TGAGGTAGTAGATTGTATTGTTT....................................................................................................... 23 1 1 10.00 10 3 1 6 0 0 0
.........................................................TGAGGTAGTAGATTGTGTAG.......................................................................................................... 20 1 2 10.00 20 3 6 9 2 0 0
.........................................................TGAGGTAGTAGATTGTCTAGTTT....................................................................................................... 23 1 1 10.00 10 0 1 9 0 0 0
.........................................................TGAGGTAGTAGATTGTACAGTTA....................................................................................................... 23 2 3 10.00 30 5 11 13 1 0 0
.........................................................TGAGGTAGTAGATTGAATAGTTT....................................................................................................... 23 1 1 10.00 10 2 0 8 0 0 0
..........................................................GAGGTAGTAGATTGTATAGTTAA...................................................................................................... 23 2 3 10.00 30 6 5 8 11 0 0
.........................................................TGAGGTAGTAGATTGTATAGTAAA...................................................................................................... 24 3 6 9.83 59 17 18 18 4 1 1
.........................................................TGAGGTAGTAGATTGTATGGTA........................................................................................................ 22 2 4 9.50 38 10 19 9 0 0 0
.........................................................TGAAGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 9.50 19 2 8 8 1 0 0
............................................................TGTAGTAGATTGTATAGTT........................................................................................................ 19 1 5 9.40 47 6 8 33 0 0 0
.........................................................TGAGGTAGTAGATTATATAGTTA....................................................................................................... 23 2 2 9.00 18 3 7 6 1 1 0
........................................................CTGAGGTAGTAGATTGTATAGTA........................................................................................................ 23 2 2 9.00 18 2 5 7 3 1 0
.........................................................TGAGGTAGTAAATTGTATAGTTT....................................................................................................... 23 1 1 9.00 9 2 3 4 0 0 0
.........................................................TGAGCTAGTAGATTGTATAGT......................................................................................................... 21 1 2 9.00 18 7 6 5 0 0 0
..........................................................GAGGTAGTAGATTGTATAGTA........................................................................................................ 21 1 2 9.00 18 4 2 12 0 0 0
.........................................................TGAGGTAGTAGAGTGTATAGTT........................................................................................................ 22 1 2 9.00 18 6 4 7 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTGTAG.................................................................................................... 26 1 2 9.00 18 4 11 1 2 0 0
.........................................................TGAAGTAGTAGATTGTATAGTTT....................................................................................................... 23 1 1 9.00 9 1 1 7 0 0 0
.........................................................TGAGGTAGTAAATTGTATAGTTA....................................................................................................... 23 2 2 8.50 17 4 5 6 2 0 0
.........................................................TGAGGTAGTATATTGTATAGTTA....................................................................................................... 23 2 2 8.50 17 1 3 10 3 0 0
.........................................................TGTGGTAGTAGATTGTATAGTTA....................................................................................................... 23 2 2 8.50 17 4 4 7 2 0 0
.........................................................TGAGGTAGTACATTGTATAGT......................................................................................................... 21 1 2 8.50 17 2 4 9 0 1 1
.........................................................TGAGGTAGTTGATTGTATAGT......................................................................................................... 21 1 4 8.50 34 7 8 16 2 0 1
..........................................................GAGGTAGTAGATTGTAT............................................................................................................ 17 0 2 8.50 17 1 2 14 0 0 0
........................................................TTGAGGTAGTAGATTGTATAGTT........................................................................................................ 23 1 3 8.33 25 3 7 13 2 0 0
.........................................................TGAGGTAGGAGATTGTATAGTTA....................................................................................................... 23 2 3 8.33 25 0 1 21 3 0 0
.........................................................TGAGGTAGTAGATTTTATAGTTA....................................................................................................... 23 2 2 8.00 16 5 4 7 0 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTCGAA.................................................................................................... 26 3 1 8.00 8 0 0 7 1 0 0
.........................................................TGAGGTAGTAGATAGTATAGTTT....................................................................................................... 23 1 1 8.00 8 1 4 2 1 0 0
...........................................................TGGTAGTAGATTGTATAGTT........................................................................................................ 20 1 2 8.00 16 2 2 9 3 0 0
.........................................................CGAGGTAGTAGATTGTATAG.......................................................................................................... 20 1 2 8.00 16 2 1 12 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGAAA....................................................................................................... 23 3 10 7.80 78 11 32 26 8 1 0
.........................................................TGAGGTAGTAGTTTGTATAG.......................................................................................................... 20 1 5 7.80 39 3 2 25 9 0 0
.........................................................TGAGGTAGTAGATTGTAGAGTT........................................................................................................ 22 1 2 7.50 15 4 5 5 1 0 0
.........................................................TGAGGTAGTAGATTGTATAATTA....................................................................................................... 23 2 2 7.50 15 0 4 11 0 0 0
.........................................................TGAGGTAGTAGATTGGATAGTTA....................................................................................................... 23 2 2 7.50 15 4 2 9 0 0 0
.........................................................TGAGGTAGTAGATTGTATAGATA....................................................................................................... 23 2 2 7.50 15 3 1 8 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTTG...................................................................................................... 24 1 1 7.00 7 0 1 4 2 0 0
.........................................................TGAGGTAGTAGATTGGATAGTTT....................................................................................................... 23 1 1 7.00 7 0 1 4 2 0 0
.........................................................TGAGGTAGTAGATTGTTTAGT......................................................................................................... 21 1 4 7.00 28 8 9 8 3 0 0
................................................................................................................................CCACGGTAGTACATATCCCATCC................................ 23 3 1 7.00 7 2 5 0 0 0 0
........................................................CTGAGGTAGTAGATTGTAT............................................................................................................ 19 1 2 7.00 14 0 0 12 2 0 0
........................................................ATGAGGTAGTAGATTGTATAGT......................................................................................................... 22 0 1 7.00 7 4 2 1 0 0 0
.........................................................TGAGGTAATAGATTGTATAGTTT....................................................................................................... 23 1 1 7.00 7 1 2 4 0 0 0

Anti-sense strand reads

TGGGAAGGTTCATCGACCGGATTCACCCGACTTCTACTTGTGATCACGAGACACCCTACTCCATCATCTAACATATCAAAATCCCAGTATGGGGTAGAACCTCTATTGATATGTCAGATGACAGAAAGGGTGCCATCATGTGAAGGGGAGGCTGCACGAGACAAATCCAAGAGCAAGACTAAT

****************************************..(((((((((((((.((((((((((((((((((((((((((((........))))))))....)))))))))))))))))))))))))))).)))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
.......................................GTGAGCACGAGACACC................................................................................................................................ 16 1 20 0.05 1 1

Generated: 09/01/2015 at 11:44 AM