ID:

ssc-let-7e

 Coordinate:

chr6:51858376-51858455 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.4 -47.0 -46.9

Sense Strand Reads

CCGCCCGCCCTGGCCCCCTGTCTGTCCGTCTGTCTGTCCACCTGCCGCGCGCCCCGGGCTGAGGTAGGAGGTTGTATAGTTGAGGAGGACACCCACGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGCGCCCTGCACGGGACGGCCCGGCGGGGACTCCTGGCCCCTGTCACC

********************************************..(((((((..(((..(((.((((((((((((((((.((...((....)).......)))))))))))))))))).))).)))..))).))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR139076

testes		 SRR066809

ovary		 SRR1274763

ovary		 SRR066810

testes		 SRR1274764

testes
...........................................................TGAGGTAGGAGGTTGTATAGTT................................................................................................... 22 0 1 53643.00 53643 43796 2422 2899 2155 1425 946
...........................................................TGAGGTAGGAGGTTGTATAGT.................................................................................................... 21 0 1 20591.00 20591 17499 930 793 654 425 290
...........................................................TGAGGTAGGAGGTTGTATAGTTA.................................................................................................. 23 1 1 8436.00 8436 7731 419 108 81 63 34
...........................................................TGAGGTAGGAGGTTGTATAGTTG.................................................................................................. 23 0 1 5523.00 5523 5099 291 49 38 36 10
...........................................................TGAGGTAGGAGGTTGTATAG..................................................................................................... 20 0 1 4401.00 4401 3999 255 31 63 24 29
...........................................................TGAGGTAGGAGGTTGTATAGTTT.................................................................................................. 23 1 3 3442.00 10326 9076 543 313 189 122 83
...........................................................TGAGGTAGTAGGTTGTATAGTTG.................................................................................................. 23 1 4 1034.50 4138 3464 317 125 101 98 33
...........................................................TGAGGTAGGAGGTTGTATAGTAA.................................................................................................. 23 2 1 995.00 995 919 51 11 5 4 5
...........................................................TGAGGTAGGAGGTTGTATAGTA................................................................................................... 22 1 1 898.00 898 774 33 42 29 10 10
..........................................................CTGAGGTAGTAGGTTGTATAGTT................................................................................................... 23 1 3 804.33 2413 988 246 606 25 540 8
...........................................................TGAGGTAGGAGGTTGTAT....................................................................................................... 18 0 1 618.00 618 564 24 5 9 3 13
...........................................................TGAGGTAGGAGGTTGTATAGTTAA................................................................................................. 24 1 1 570.00 570 504 48 7 6 2 3
...........................................................TGAGGTAGGAGGTTGTATGGTT................................................................................................... 22 1 2 554.00 1108 1033 23 32 0 18 2
...........................................................TGAGGTAGGAGGTTGTATA...................................................................................................... 19 0 1 503.00 503 454 17 10 9 4 9
...........................................................TGAGGTAGGAGGTTGTATAGTTGT................................................................................................. 24 1 1 493.00 493 425 32 14 10 11 1
...........................................................TGAGGTAGGAGGTTGTATAGA.................................................................................................... 21 1 1 480.00 480 388 12 28 22 22 8
...........................................................TGAGGTAGGAGGTTGTATAGTTGA................................................................................................. 24 0 1 349.00 349 305 17 14 8 4 1
...........................................................TGAGGTAGGAGGTTGTATAA..................................................................................................... 20 1 1 308.00 308 283 16 2 3 2 2
...........................................................TGCGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 228.00 228 216 9 0 1 1 1
............................................................GAGGTAGGAGGTTGTATAGTT................................................................................................... 21 0 1 214.00 214 103 2 93 0 16 0
...........................................................TGAGGTAGCAGGTTGTATAGTT................................................................................................... 22 1 3 204.00 612 418 35 61 23 65 10
...........................................................TGAGGTAGGAGGTTGTA........................................................................................................ 17 0 1 196.00 196 180 6 4 2 1 3
..........................................................CTGAGGTAGTAGGTTGTATAGT.................................................................................................... 22 1 3 186.00 558 242 64 144 2 103 3
...........................................................TGAGGTAGGCGGTTGTATAGTT................................................................................................... 22 1 1 150.00 150 141 8 0 1 0 0
...........................................................TGAGGTAGGAGGTTGTATAGAA................................................................................................... 22 2 1 122.00 122 106 3 4 6 1 2
...........................................................TGAGGTAGGAGGTTGTATAGTAT.................................................................................................. 23 2 3 114.00 342 320 13 2 5 1 1
........................................................................................................CTATACGGCCTCCTAGCTTTCC...................................................... 22 0 1 106.00 106 20 7 34 34 11 0
...........................................................TGAGGCAGGAGGTTGTATAGTT................................................................................................... 22 1 1 104.00 104 82 12 3 3 2 2
...........................................................TGAGGTAGGAGGTTGTATAGTTAT................................................................................................. 24 2 2 101.00 202 184 7 3 1 5 2
..........................................................CTGAGGTAGGAGGTTGTATAGTT................................................................................................... 23 0 1 94.00 94 75 8 7 0 4 0
...........................................................TGAGGTAGGAGGTTGTGTGGTT................................................................................................... 22 2 4 93.75 375 353 4 10 0 8 0
...........................................................TGAGGTAGTAGGTTGTATAGTTGA................................................................................................. 24 1 2 89.50 179 123 25 10 7 11 3
...........................................................TGAGGTAGGAGGTTGTATCGTT................................................................................................... 22 1 1 88.00 88 84 3 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTAGTT................................................................................................... 22 1 1 85.00 85 78 2 3 1 1 0
...........................................................TGCGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 82.00 82 78 2 0 2 0 0
...........................................................TGAGGTAGGAGGTTGTATGGT.................................................................................................... 21 1 2 73.00 146 133 4 4 0 5 0
...........................................................TGAGGTAGGAGGTTGTATAGTAG.................................................................................................. 23 1 1 72.00 72 67 4 1 0 0 0
............................................................GAGGTAGGAGGTTGTATAGT.................................................................................................... 20 0 1 71.00 71 49 1 18 0 3 0
...........................................................TGAGGTAGAAGGTTGTATAGTT................................................................................................... 22 1 3 67.00 201 114 16 39 4 26 2
...........................................................TGAGGTAGGAGGTTGTATAT..................................................................................................... 20 1 1 67.00 67 60 6 0 0 0 1
...........................................................TGAGGTAGGAGGTTGCATAGTT................................................................................................... 22 1 1 66.00 66 60 1 3 1 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTTC.................................................................................................. 23 1 1 64.00 64 49 0 10 1 4 0
...........................................................TGAGGTAGGCGGTTGTATAGT.................................................................................................... 21 1 1 58.00 58 54 4 0 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATAGTTA.................................................................................................. 24 2 3 56.67 170 89 30 28 0 22 1
...........................................................TGAGGTAGGAGGTTGTATAGTTTA................................................................................................. 24 1 2 53.50 107 95 8 0 3 0 1
...........................................................TGAGGTAGGAGATTGTATAGTT................................................................................................... 22 1 3 52.33 157 86 15 22 3 31 0
...........................................................CGAGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 51.00 51 46 0 4 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTG................................................................................................... 22 1 1 49.00 49 47 0 0 1 0 1
...........................................................TGAGGTCGGAGGTTGTATAGTT................................................................................................... 22 1 1 45.00 45 42 2 1 0 0 0
...........................................................TGAGGCAGGAGGTTGTATAGT.................................................................................................... 21 1 1 45.00 45 37 4 0 3 0 1
...........................................................TGGGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 44.00 44 40 1 2 0 1 0
...........................................................TGAGGTAGGAGGCTGTATAGTT................................................................................................... 22 1 1 44.00 44 37 2 2 2 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTGA.................................................................................................. 23 2 1 44.00 44 37 5 0 0 1 1
...........................................................TGAGGTAGCAGGTTGTATAGT.................................................................................................... 21 1 3 40.67 122 79 6 19 2 15 1
...........................................................TGAGGTAGGAGGTTGTCTAGTT................................................................................................... 22 1 1 40.00 40 39 0 0 1 0 0
...........................................................TGAGGTAGGGGGTTGTATAGTT................................................................................................... 22 1 1 39.00 39 33 3 2 0 0 1
...........................................................TGCGGTAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 39.00 39 38 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTC................................................................................................... 22 1 1 37.00 37 31 1 1 0 3 1
..............................................................GGTAGTAGGTTGTATAGTTGA................................................................................................. 21 1 2 35.50 71 67 4 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGCT................................................................................................... 22 1 1 35.00 35 28 3 3 0 1 0
...........................................................TGAGGTAGGAGGTTGTGTAGT.................................................................................................... 21 1 1 35.00 35 32 2 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTATGGTTA.................................................................................................. 23 2 2 34.50 69 65 3 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTAG................................................................................................. 24 2 1 34.00 34 28 2 2 2 0 0
...........................................................TGAGGGAGGAGGTTGTATAGTT................................................................................................... 22 1 1 33.00 33 27 5 0 0 0 1
...........................................................TGAGGTATGAGGTTGTATAGTT................................................................................................... 22 1 1 32.00 32 29 2 0 0 1 0
...........................................................TGAGGTAGGAGGTTGTACAGTT................................................................................................... 22 1 1 32.00 32 29 0 3 0 0 0
...........................................................TGAGGTAGGAGGTTGTATATTT................................................................................................... 22 1 1 30.00 30 27 2 1 0 0 0
...........................................................TGAGGTAGGAGTTTGTATAGTT................................................................................................... 22 1 1 29.00 29 26 2 1 0 0 0
...........................................................TGAGGTGGGAGGTTGTATAGTT................................................................................................... 22 1 1 28.00 28 26 0 1 0 1 0
...........................................................TGAGGTAGGAGGTCGTATAGTT................................................................................................... 22 1 1 28.00 28 20 0 4 2 1 1
...........................................................TGGGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 27.00 27 26 1 0 0 0 0
...........................................................TGAGTTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 27.00 27 27 0 0 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATAG..................................................................................................... 21 1 3 26.67 80 55 18 4 0 3 0
...........................................................TGAGGTAGGAGGTTGTATAGGT................................................................................................... 22 1 1 26.00 26 25 0 0 0 1 0
...........................................................TGCGGTAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 26.00 26 26 0 0 0 0 0
..........................................................CTGAGGTAGGAGGTTGTATAGT.................................................................................................... 22 0 1 26.00 26 21 1 2 0 2 0
........................................................................................................CTATACGGCCTCCTAGCTTTC....................................................... 21 0 1 25.00 25 6 0 14 2 2 1
...........................................................TGAGGTCGGAGGTTGTATAGT.................................................................................................... 21 1 1 25.00 25 25 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAAA.................................................................................................... 21 2 3 24.33 73 61 0 6 2 1 3
...........................................................TGAGGTAGGATGTTGTATAGTT................................................................................................... 22 1 1 24.00 24 16 7 1 0 0 0
...........................................................AGAGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 24.00 24 22 2 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTTA.................................................................................................. 23 2 1 24.00 24 22 1 1 0 0 0
............................................................GAGGTAGGAGGTTGTATAGTTA.................................................................................................. 22 1 1 24.00 24 22 1 0 0 1 0
.............................................................AGGTAGGAGGTTGTATAGTT................................................................................................... 20 0 1 24.00 24 17 1 5 0 1 0
...........................................................TGCGGTAGGAGGTTGTATAG..................................................................................................... 20 1 1 23.00 23 21 2 0 0 0 0
..........................................................CTGAGGTAGGAGGTTGTATAGTTA.................................................................................................. 24 1 1 22.00 22 21 1 0 0 0 0
...........................................................TAAGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 22.00 22 16 3 2 0 0 1
...........................................................TGAGGAAGGAGGTTGTATAGTT................................................................................................... 22 1 1 22.00 22 18 4 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGAT................................................................................................... 22 1 1 22.00 22 20 0 1 1 0 0
...........................................................TGAGGTAGGAGGGTGTATAGTT................................................................................................... 22 1 1 21.00 21 19 2 0 0 0 0
........................................................................................................CTATACGGCCTCCTAGCTTTCT...................................................... 22 1 1 21.00 21 5 1 7 4 4 0
...........................................................TGAGGTAGGAGGTTGCATAGT.................................................................................................... 21 1 1 20.00 20 19 0 1 0 0 0
...........................................................TGAGGTAGGAGGTTGGATAGTT................................................................................................... 22 1 1 20.00 20 18 2 0 0 0 0
...........................................................TGAGGTAGTAGGTTGTATAGTAG.................................................................................................. 23 2 4 19.75 79 64 10 1 3 0 1
...........................................................TGTGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 18.00 18 13 1 2 1 0 1
...........................................................TGAGGTAGAAGGTTGTATAGT.................................................................................................... 21 1 3 17.67 53 31 3 9 0 10 0
...........................................................TGATGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 17.00 17 15 2 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTTG.................................................................................................. 23 1 1 17.00 17 16 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTTTATAGTT................................................................................................... 22 1 1 17.00 17 12 0 5 0 0 0
...........................................................TGAGGTAGGAGATTGTATAGT.................................................................................................... 21 1 3 16.33 49 32 7 5 0 5 0
...........................................................TGAGGTAGGAGGTTGTCTAGT.................................................................................................... 21 1 1 16.00 16 15 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTTTAGTT................................................................................................... 22 1 1 16.00 16 16 0 0 0 0 0
..........................................................CTGAGGTAGGAGGTTGTATAGTTT.................................................................................................. 24 1 1 16.00 16 14 1 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTACAGT.................................................................................................... 21 1 1 16.00 16 15 0 1 0 0 0
...........................................................CGAGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 16.00 16 13 2 0 0 1 0
.........................................................TCTGAGGTAGTAGGTTGTATAGTT................................................................................................... 24 2 3 14.33 43 33 3 3 0 2 2
...........................................................TGAGGTAGGAGGTTGTATAGC.................................................................................................... 21 1 1 14.00 14 13 0 1 0 0 0
...........................................................TGAGGTAGGGGGTTGTATAGT.................................................................................................... 21 1 1 14.00 14 12 1 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTATTGTT................................................................................................... 22 1 1 14.00 14 8 3 1 1 1 0
...........................................................TGAGGTAGGAAGTTGTATAGTT................................................................................................... 22 1 1 14.00 14 8 2 2 1 1 0
.........................................................................................................TATACGGCCTCCTAGCTTTCCT..................................................... 22 1 1 14.00 14 6 0 4 4 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTAAA................................................................................................ 25 2 1 14.00 14 10 2 0 0 1 1
..........................................................CTGAGGTAGGAGGTTGTATAGTTG.................................................................................................. 24 0 1 14.00 14 14 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATGGTTG.................................................................................................. 23 1 1 14.00 14 14 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTGT.................................................................................................. 23 2 3 13.67 41 36 3 1 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTCA.................................................................................................. 23 2 1 13.00 13 12 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTAC.................................................................................................. 23 2 1 13.00 13 11 0 2 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTTT.................................................................................................. 23 2 3 13.00 39 32 6 0 1 0 0
...........................................................TGAGGTAGGAGGTTATATAGTT................................................................................................... 22 1 1 13.00 13 10 1 0 1 1 0
...........................................................TGAGGTAGGAGGTTGTATAAT.................................................................................................... 21 1 1 13.00 13 11 0 1 1 0 0
...........................................................AGAGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0
...........................................................TGAGGTTGGAGGTTGTATAGTT................................................................................................... 22 1 1 13.00 13 12 1 0 0 0 0
........................................................................................................CTATACGGCCTCCTAGCTTTCCT..................................................... 23 1 1 13.00 13 3 0 5 5 0 0
...........................................................TGAGGGAGGAGGTTGTATAGT.................................................................................................... 21 1 1 13.00 13 11 2 0 0 0 0
...........................................................TGAGGCAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 13.00 13 13 0 0 0 0 0
...........................................................TGCGGTAGGAGGTTGTATAGTTT.................................................................................................. 23 2 3 12.33 37 35 2 0 0 0 0
...........................................................TGAGGTAGGAGGCTGTATAGT.................................................................................................... 21 1 1 12.00 12 10 0 0 1 0 1
...........................................................TGAGGTAGGTGGTTGTATAGTT................................................................................................... 22 1 1 12.00 12 10 2 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGG.................................................................................................... 21 1 1 12.00 12 12 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATCGT.................................................................................................... 21 1 1 12.00 12 11 0 0 1 0 0
...........................................................TGAGGTATGAGGTTGTATAGT.................................................................................................... 21 1 1 12.00 12 12 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATGGTA................................................................................................... 22 2 2 11.50 23 20 0 1 1 1 0
...........................................................TGAGGTAGGAGGTTGTGTGGT.................................................................................................... 21 2 7 11.29 79 71 4 2 0 2 0
............................................................GAGGTAGGAGGTTGTATAG..................................................................................................... 19 0 1 11.00 11 11 0 0 0 0 0
...........................................................TTAGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 11.00 11 11 0 0 0 0 0
...........................................................TGAGGTAGGACGTTGTATAGTT................................................................................................... 22 1 1 11.00 11 8 1 1 1 0 0
...........................................................TGAGGTAGCAGGTTGTATAGTTA.................................................................................................. 23 2 3 11.00 33 24 1 2 1 5 0
...........................................................TGAGGTAGGAGGTTGTATAGAAA.................................................................................................. 23 3 5 11.00 55 47 2 5 1 0 0
...........................................................TGAGCTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 11.00 11 9 0 0 0 1 1
...........................................................TGAGGTAGGAGGTTGTGTAGTTA.................................................................................................. 23 2 1 11.00 11 10 0 1 0 0 0
...........................................................TGAGGTAGGAGGGTGTATAGT.................................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0
..........................................................CTGAGGTAGGAGGTTGTATAG..................................................................................................... 21 0 1 11.00 11 10 1 0 0 0 0
.............................................................AGGTAGGAGGTTGTATAGTTG.................................................................................................. 21 0 1 10.00 10 9 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTAAAGTT................................................................................................... 22 1 1 10.00 10 9 1 0 0 0 0
............................................................GAGGTAGGAGGTTGTATAGTTT.................................................................................................. 22 1 3 10.00 30 15 0 12 0 3 0
...........................................................TGATGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 10.00 10 8 0 0 0 2 0
...........................................................TGAGGTAGGAGGATGTATAGTT................................................................................................... 22 1 1 10.00 10 8 1 0 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTAAA................................................................................................. 24 2 1 10.00 10 9 1 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAG..................................................................................................... 20 1 1 10.00 10 10 0 0 0 0 0
...........................................................TGGGGTAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 10.00 10 9 1 0 0 0 0
...........................................................TGAGGCAGGAGGTTGTATAG..................................................................................................... 20 1 1 10.00 10 9 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTAAAGT.................................................................................................... 21 1 1 9.00 9 6 0 2 0 1 0
...........................................................TGAGGTAGGAGGTTGTATCGTTA.................................................................................................. 23 2 1 9.00 9 9 0 0 0 0 0
...........................................................TAAGGTAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 9.00 9 7 0 1 0 1 0
...........................................................TGAGGTAGGAGGTTGTATGG..................................................................................................... 20 1 2 9.00 18 16 0 1 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTCG.................................................................................................. 23 1 1 9.00 9 9 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTGGTTG.................................................................................................. 23 2 1 9.00 9 8 0 1 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATAGTTG.................................................................................................. 24 1 1 9.00 9 7 2 0 0 0 0
...........................................................TGAGGCAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 9.00 9 8 1 0 0 0 0
...........................................................TGAGGAAGGAGGTTGTATAGT.................................................................................................... 21 1 1 9.00 9 8 1 0 0 0 0
...........................................................TGAGGTAGGAGGATGTATAGTTA.................................................................................................. 23 2 1 9.00 9 6 3 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTGAA................................................................................................ 25 1 1 9.00 9 6 0 0 3 0 0
........................................................................................................CTATACGGCCTCCTAGCTTT........................................................ 20 0 1 9.00 9 6 2 0 0 1 0
...........................................................TGAGGTAGGAGTTTGTATAGT.................................................................................................... 21 1 1 9.00 9 7 1 0 1 0 0
...........................................................TGAGGTGGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 9.00 9 9 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTTTATAGT.................................................................................................... 21 1 1 9.00 9 9 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTCTAGTTG.................................................................................................. 23 1 1 9.00 9 8 1 0 0 0 0
...........................................................TGAGGTAGGAGATTGTATAGTTA.................................................................................................. 23 2 3 8.33 25 21 3 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAATT................................................................................................... 22 1 1 8.00 8 7 0 0 1 0 0
...........................................................TGAGGTAGGAGGTTGTCTAGTTA.................................................................................................. 23 2 1 8.00 8 8 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTGGTTA.................................................................................................. 23 3 5 8.00 40 38 1 0 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGTTCA................................................................................................. 24 1 1 8.00 8 8 0 0 0 0 0
.............................................................AGGTAGGAGGTTGTATAGT.................................................................................................... 19 0 1 8.00 8 7 0 1 0 0 0
..............................................................GGTAGGAGGTTGTATAGTT................................................................................................... 19 0 1 8.00 8 6 0 0 2 0 0
...........................................................TGAGGTAGGAGGTTCTATAGTT................................................................................................... 22 1 1 8.00 8 6 1 0 1 0 0
...........................................................TGAGGTAGGAGGTTGTAA....................................................................................................... 18 1 3 8.00 24 22 0 1 0 0 1
...........................................................TGAGGTAGGAGGTAGTATAGTT................................................................................................... 22 1 1 8.00 8 6 0 1 0 0 1
......................................................................................................CACTATACGGCCTCCTAGCTTT........................................................ 22 0 1 8.00 8 1 0 3 0 4 0
...........................................................TGAGATAGGAGGTTGTATAGTT................................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
...........................................................TAAGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
................................................................TAGGAGGTTGTATAGTT................................................................................................... 17 0 1 8.00 8 2 0 0 5 0 1
...........................................................TGAGGTGGGAGGTTGTATAGT.................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTAAA...................................................................................................... 19 1 2 7.50 15 11 0 0 3 0 1
...........................................................TGAGGTAGGAGGTTGTATT...................................................................................................... 19 1 6 7.17 43 35 3 1 3 0 1
.................................................................................GAGGAGGACACCCACGGAGATCA............................................................................ 23 0 1 7.00 7 7 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGCATAGTTA.................................................................................................. 23 2 1 7.00 7 6 1 0 0 0 0
...........................................................TGAGGTAGGGGGTTGTATAGTTG.................................................................................................. 23 1 1 7.00 7 7 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGGATAGT.................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATCG..................................................................................................... 20 1 1 7.00 7 7 0 0 0 0 0
...........................................................TGAGGTCGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 7.00 7 6 1 0 0 0 0
........................................................................................................CTATACGGCCTCCTAGCTTTCCA..................................................... 23 1 1 7.00 7 6 0 0 1 0 0
.........................................................................................................TATACGGCCTCCTAGCTTTCC...................................................... 21 0 1 7.00 7 2 0 4 1 0 0
...........................................................TGAGGTAGCAGGTTGTATAG..................................................................................................... 20 1 3 6.33 19 13 3 0 0 3 0
...........................................................TGAGGTAGGATGTTGTATAGT.................................................................................................... 21 1 1 6.00 6 5 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGCATAGTTG.................................................................................................. 23 1 1 6.00 6 5 1 0 0 0 0
...........................................................TGAGGTAGTAGGTTGTATAGTTGAAC............................................................................................... 26 3 3 6.00 18 16 2 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTGC................................................................................................. 24 1 1 6.00 6 4 0 1 0 1 0
...........................................................TGAGGTAGGGGGTTGTATAGTTA.................................................................................................. 23 2 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAAGAGGTTGTATAGTT................................................................................................... 22 1 1 6.00 6 5 1 0 0 0 0
............................................................GAGGTAGGAGGTTGTATAGTTG.................................................................................................. 22 0 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATTGT.................................................................................................... 21 1 1 6.00 6 5 1 0 0 0 0
...........................................................TGAGGTAGGAGGTCGTATAGT.................................................................................................... 21 1 1 6.00 6 5 1 0 0 0 0
.............................................................AGGTAGGAGGTTGTATAGTTGA................................................................................................. 22 0 1 6.00 6 5 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGAATAGT.................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATATT.................................................................................................... 21 1 1 6.00 6 4 0 0 2 0 0
...........................................................TGAGGTAGGAGGTTGCATAG..................................................................................................... 20 1 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGGTA.................................................................................................. 23 2 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTAGTTG.................................................................................................. 23 1 1 6.00 6 6 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATACTT................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATAGTA................................................................................................... 23 2 3 5.67 17 11 3 3 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGAG................................................................................................... 22 2 2 5.50 11 11 0 0 0 0 0
...........................................................TGAGGTCGGAGGTTGTATAGTTT.................................................................................................. 23 2 3 5.33 16 14 2 0 0 0 0
...........................................................TGAGGTAGGAGGCTGTATAGTTA.................................................................................................. 23 2 1 5.00 5 4 1 0 0 0 0
...........................................................TGAGGAAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTCGGAGGTTGTATAG..................................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
............................................................TAGGTAGGAGGTTGTATAGTT................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTAC................................................................................................. 24 2 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTAGTTT.................................................................................................. 23 2 3 5.00 15 14 1 0 0 0 0
...........................................................TGCGGTAGGAGGTTGTATAGTA................................................................................................... 22 2 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGATAGGAGGTTGTATAGT.................................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
...........................................................TGAGGTAGGGGGTTGTATAG..................................................................................................... 20 1 1 5.00 5 4 1 0 0 0 0
...........................................................TGAGGTAGGAGGTGGTATAGTT................................................................................................... 22 1 1 5.00 5 4 0 0 1 0 0
...........................................................TGAGGTAGTAGGTTGTATAGTAGAC................................................................................................ 25 3 2 5.00 10 9 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTCACC............................................................................................... 26 3 1 5.00 5 5 0 0 0 0 0
...........................................................CGAGGTAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 5.00 5 5 0 0 0 0 0
.................................................................AGGAGGTTGTATAGTTGAGGT.............................................................................................. 21 1 1 5.00 5 2 3 0 0 0 0
...........................................................TAAGGTAGGAGGTTGTATAG..................................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTAGA................................................................................................. 24 1 1 5.00 5 2 0 2 0 1 0
...........................................................TGAGGTAGGAGTTTGTATAGTTA.................................................................................................. 23 2 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTATATAGT.................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAAGTTGTATAGT.................................................................................................... 21 1 1 5.00 5 3 0 2 0 0 0
...........................................................TGAGTTAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGCTGTATAG..................................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTTTAG..................................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATAGTTAA................................................................................................. 25 2 2 4.50 9 3 5 1 0 0 0
...........................................................TGCGGTAGTAGGTTGTATAGTTG.................................................................................................. 23 2 4 4.50 18 18 0 0 0 0 0
...........................................................TGAGGTAGAAGGTTGTATAGTTA.................................................................................................. 23 2 3 4.33 13 11 1 1 0 0 0
...........................................................TGAGGTAGGAGGTTGGATAG..................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
...........................................................CGAGGTAGGAGGTTGTATAG..................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGGATGTATAGT.................................................................................................... 21 1 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGTAGGTGGTTGTATAGTTA.................................................................................................. 23 2 1 4.00 4 3 1 0 0 0 0
...........................................................GGAGGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGAATAGTTA.................................................................................................. 23 2 1 4.00 4 4 0 0 0 0 0
...........................................................TGTGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 4.00 4 3 0 1 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTTGG................................................................................................. 24 1 1 4.00 4 4 0 0 0 0 0
............................................................GAGGTAGGAGGTTGTATAGA.................................................................................................... 20 1 1 4.00 4 1 1 1 0 1 0
...........................................................TGAGGTAGGAGGCTGTATAGTTG.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGTAGGTTGTATAGTCGAC................................................................................................ 25 3 2 4.00 8 7 1 0 0 0 0
...........................................................TGAGGGAGGAGGTTGTATAG..................................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTATATAGTTG.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTCTAG..................................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTTGA................................................................................................. 24 1 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGGATAGTTG.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGTTTGTATAG..................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGCTTGTATAGTT................................................................................................... 22 1 1 4.00 4 2 0 1 1 0 0
...........................................................TGAGGTAGGAGGTTGTATAGGTT.................................................................................................. 23 2 3 4.00 12 12 0 0 0 0 0
...........................................................GGAGGTAGGAGGTTGTATAGT.................................................................................................... 21 1 1 4.00 4 3 1 0 0 0 0
...........................................................TGAGGTTGGAGGTTGTATAGT.................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
............................................................GAGGTAGGAGGTTGTATAGTTGA................................................................................................. 23 0 1 4.00 4 3 0 1 0 0 0
...........................................................TGAGGTACGAGGTTGTATAGTT................................................................................................... 22 1 1 4.00 4 2 0 2 0 0 0
.........................................................TCTGAGGTAGGAGGTTGTATAGTT................................................................................................... 24 1 1 4.00 4 2 1 0 0 1 0
...........................................................TGAGGTAGGAGGTTGTATAGAAG.................................................................................................. 23 2 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTAA.................................................................................................. 23 3 1 4.00 4 3 1 0 0 0 0
...........................................................TAAGGTAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAGGGTGTATAG..................................................................................................... 20 1 1 4.00 4 3 0 1 0 0 0
...........................................................TGAGGTAGGAGGTCGTATAGTTA.................................................................................................. 23 2 1 4.00 4 4 0 0 0 0 0
..........................................................CTGAGGTAGGAGGTTGTATA...................................................................................................... 20 0 1 4.00 4 3 0 0 0 0 1
...........................................................TGAGGTAGGAGGTTGTATAGCTG.................................................................................................. 23 1 1 4.00 4 4 0 0 0 0 0
...........................................................TGAGGTAGGAAGTTGTATAGTTA.................................................................................................. 23 2 1 4.00 4 3 1 0 0 0 0
......................................................................................................CACTATACGGCCTCCTAGCTT......................................................... 21 0 1 4.00 4 0 0 4 0 0 0
...........................................................TGAAGTAGGAGGTTGTATAGTT................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0
...........................................................CGAGGTAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 4.00 4 4 0 0 0 0 0
...........................................................TGGGGTAGGAGGTTGTATAGTTT.................................................................................................. 23 2 3 3.67 11 11 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATCGTTT.................................................................................................. 23 2 4 3.50 14 13 1 0 0 0 0
..........................................................CTGAGGTAGTAGGTTGTATGGTTG.................................................................................................. 24 2 2 3.50 7 5 2 0 0 0 0
...........................................................TGAGGCAGGAGGTTGTATAGTTT.................................................................................................. 23 2 4 3.50 14 13 1 0 0 0 0
...........................................................TGAGGGAGGAGGTTGTATAGTTT.................................................................................................. 23 2 3 3.33 10 9 1 0 0 0 0
.........................................................TCTGAGGTAGTAGGTTGTATAGT.................................................................................................... 23 2 3 3.33 10 9 0 1 0 0 0
...........................................................TGAGGTAGGAGGTTGAATAGTT................................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTGTAG..................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGTGAA................................................................................................. 24 2 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGATGTTGTATAGTTG.................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAAGAGGTTGTATAGT.................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGACGTTGTATAGT.................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGGAGGAGGGTGTATAGTT................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
............................................................GTGGTAGGAGGTTGTATAGTT................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGCGGTAGGAGGTTGCATAGTT................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...........................................................TGCGGCAGGAGGTTGTATAGTT................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGCGGTTGTATAGTTAA................................................................................................. 24 2 1 3.00 3 3 0 0 0 0 0
..........................................................CTGAGGTAGAAGGTTGTATAGTT................................................................................................... 23 1 1 3.00 3 2 0 0 0 1 0
...........................................................TGACGTAGGAGGTTGTATAGTTA.................................................................................................. 23 2 1 3.00 3 2 1 0 0 0 0
...........................................................TGAGGTAGGAGGTTGTATAGCTA.................................................................................................. 23 2 1 3.00 3 3 0 0 0 0 0
...............................................................GTAGGAGGTTGTATAGTT................................................................................................... 18 0 1 3.00 3 1 0 0 1 0 1
............................................................GAGGTAGGAGGTTGTATAGTA................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..............................................................GGTAGGAGGTTGTATAGTTGA................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0
...........................................................TGCGGTAGGAGGTTGTATA...................................................................................................... 19 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGGGGTTGTATAGTTT.................................................................................................. 23 2 3 3.00 9 8 1 0 0 0 0
...........................................................TGAGGGAGGAGGTTGTATAGTTG.................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0
...........................................................TGAGGTAGGATGTTGTATAG..................................................................................................... 20 1 1 3.00 3 2 1 0 0 0 0
...........................................................TGAGGTAGGAGATTGTATAG..................................................................................................... 20 1 3 3.00 9 5 2 2 0 0 0
...........................................................TGAGGTAGCAGGTTGTATAGTTG.................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0

Anti-sense strand reads

GGCGGGCGGGACCGGGGGACAGACAGGCAGACAGACAGGTGGACGGCGCGCGGGGCCCGACTCCATCCTCCAACATATCAACTCCTCCTGTGGGTGCCTCTAGTGATATGCCGGAGGATCGAAAGGGGTCCGACGCGGGACGTGCCCTGCCGGGCCGCCCCTGAGGACCGGGGACAGTGG

***************************************..(((((((..(((..(((.((((((((((((((((.((...((....)).......)))))))))))))))))).))).)))..))).))))....******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
.................................................................................................................................................TCTGCCGGGCCGCCCC................... 16 1 20 0.10 2 2

Generated: 09/01/2015 at 11:38 AM