ID:

ssc-let-7c

 Coordinate:

chr13:191559336-191559429 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

GGAGGAGCTGACTGAAGATATGATAAGGAGTTTGAAGCAACAGTGGAAGCTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCGTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCATCGAGGAATTCTTCATCATTTTAATCTGATCAAGCCTATTTCT

**************************************************.((((((.((((((..(((.(((.(((((((((((((.....((((...)))).....))))))))))))).))).)))..))))))))))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066810

testes		 SRR066809

ovary		 SRR139076

testes		 SRR1274763

ovary		 SRR1274764

testes
.................................................................TGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 0 1 884222.00 884222 491907 179615 155624 24384 28506 4186
.................................................................TGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 396234.00 396234 257007 58590 56155 14460 7778 2244
.................................................................TGAGGTAGTAGGTTGTATGGT............................................................................................................ 21 0 1 121979.00 121979 71455 22582 20573 3706 3187 476
.................................................................TGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 97865.00 97865 64883 13720 11936 5276 1442 608
.................................................................TGAGGTAGTAGGTTGTGTGGT............................................................................................................ 21 1 1 88630.00 88630 55410 14163 13148 3091 2037 781
.................................................................TGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 48582.00 48582 39068 3098 3328 2355 541 192
.................................................................TGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 0 1 44734.00 44734 27334 7843 6692 1596 1146 123
.................................................................TGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 1 1 42274.00 42274 32389 3680 3542 1815 714 134
.................................................................TGAGGTAGTAGGTTGTATGGTA........................................................................................................... 22 1 1 24111.00 24111 15747 3392 3396 910 574 92
.................................................................TGAGGTAGTAGGTTGTATGG............................................................................................................. 20 0 1 20345.00 20345 8263 5801 5097 571 507 106
.................................................................TGAGGTAGTAGGTTGTGTGGTAT.......................................................................................................... 23 2 1 20051.00 20051 17167 600 600 1544 87 53
.................................................................TGAGGTAGTAGGTTGTGTGGTA........................................................................................................... 22 2 1 13836.00 13836 9897 1431 1571 627 195 115
.................................................................TGAGGTAGTAGGTTGTGTGG............................................................................................................. 20 1 2 11150.00 22300 11862 4617 3982 764 717 358
.................................................................TGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 24 2 1 6403.00 6403 4614 663 655 380 74 17
..................................................................GAGGTAGTAGGTTGTATGGTT........................................................................................................... 21 0 1 6325.00 6325 3536 1360 1259 148 20 2
.................................................................TGAGGTAGTAGGTTGTGTGGTAA.......................................................................................................... 23 3 2 6096.50 12193 9984 666 639 772 92 40
.................................................................TGAGGTAGTAGGTTGTATGGTAA.......................................................................................................... 23 2 1 6014.00 6014 4280 628 601 367 120 18
.................................................................TGAGGTAGTAGGTTGTGTGGTTAT......................................................................................................... 24 3 2 6014.00 12028 8091 1530 1493 744 124 46
.................................................................TGAGGTAGTAGGTTGTGTGGTTTT......................................................................................................... 24 2 2 5318.50 10637 5545 2293 1949 630 117 103
.................................................................TGAGGTAGTAGGTTGTATGGTAT.......................................................................................................... 23 1 1 3409.00 3409 2780 157 208 201 54 9
.................................................................TGAGGTAGTAGGTTGTATGGTTAA......................................................................................................... 24 1 1 2705.00 2705 1914 310 263 172 42 4
.................................................................TGCGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 2663.00 2663 2548 18 10 82 4 1
.................................................................TGAGGTAGTAGGTTGTATGGA............................................................................................................ 21 1 1 2644.00 2644 1371 393 557 89 208 26
.................................................................TGAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 24 1 1 2275.00 2275 1562 256 269 155 25 8
.................................................................TGAGGTAGTAGGTTGTGTG.............................................................................................................. 19 1 2 2143.00 4286 3794 165 149 149 25 4
.................................................................TGAGGTAGTAGGTTGTATGGTTG.......................................................................................................... 23 1 1 2011.00 2011 1575 69 80 60 211 16
................................................................CTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 23 1 1 1730.00 1730 802 393 432 94 7 2
..................................................................GAGGTAGTAGGTTGTGTGGTT........................................................................................................... 21 1 1 1463.00 1463 941 226 246 35 14 1
.................................................................TGCGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 1413.00 1413 1345 1 6 57 2 2
.................................................................TGAGGTAGTAGGTTGTGTGGTTG.......................................................................................................... 23 2 2 1212.50 2425 1949 66 93 78 210 29
.................................................................TGAGGTAGTAGGTTGTATGGTTAT......................................................................................................... 24 2 2 1180.50 2361 1361 431 406 119 34 10
.................................................................TGAGGCAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 1173.00 1173 788 112 115 84 67 7
.................................................................TGAGGTAGTAGGTTGTAT............................................................................................................... 18 0 3 1115.00 3345 2540 130 196 130 206 143
.................................................................TGAGGTAGTCGGTTGTATGGTT........................................................................................................... 22 1 1 989.00 989 877 14 23 73 2 0
.................................................................TGAGGTAGTAGGTTGTA................................................................................................................ 17 0 3 971.00 2913 1653 158 202 47 646 207
................................................................TTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 23 0 1 895.00 895 517 111 144 40 67 16
.................................................................TGAGGTAGTAGGTTGTATG.............................................................................................................. 19 0 1 888.00 888 628 95 80 27 42 16
.................................................................TGAGGTAGTAGGTTGTGTGGTTC.......................................................................................................... 23 2 1 876.00 876 297 282 251 18 23 5
.................................................................TGAGGTAGTAGGTTGCATGGTT........................................................................................................... 22 1 1 845.00 845 693 62 64 22 3 1
.................................................................TGAGGTAGTAGGTTGTATGGGT........................................................................................................... 22 1 1 784.00 784 629 66 63 20 3 3
..................................................................GAGGTAGTAGGTTGTATGGT............................................................................................................ 20 0 1 718.00 718 415 131 146 22 4 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTT......................................................................................................... 24 1 2 717.00 1434 599 379 358 54 35 9
.................................................................TGAGGTAGTAGATTGTATGGTT........................................................................................................... 22 1 3 714.67 2144 603 859 655 21 5 1
................................................................TTGAGGTAGTAGGTTGTATGGT............................................................................................................ 22 0 1 712.00 712 470 69 100 27 36 10
.................................................................TGAGGTAGTAGGTTGTATGGCT........................................................................................................... 22 1 1 661.00 661 461 64 75 52 8 1
.................................................................TGAGGTAGTAGGCTGTATGGTT........................................................................................................... 22 1 1 644.00 644 407 117 92 20 8 0
.................................................................TGAGGTAGTAGTTTGTATGGTT........................................................................................................... 22 1 1 614.00 614 307 151 133 22 1 0
.................................................................TGAGGTGGTAGGTTGTATGGTT........................................................................................................... 22 1 1 598.00 598 412 83 86 14 2 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTAG......................................................................................................... 24 3 1 596.00 596 461 43 47 22 22 1
.................................................................CGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 589.00 589 353 93 94 42 7 0
.................................................................TGAGGTCGTAGGTTGTATGGTT........................................................................................................... 22 1 1 587.00 587 521 16 12 35 3 0
.................................................................TGGGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 582.00 582 393 68 95 18 7 1
.................................................................TGAGGTAGTAGGTTGTCTGGTT........................................................................................................... 22 1 1 568.00 568 507 9 24 25 1 2
.................................................................TGAGGTAGTCGGTTGTGTGGTT........................................................................................................... 22 2 1 567.00 567 518 6 7 34 1 1
.................................................................TGAGGTAGTAGGTTGTATGGAA........................................................................................................... 22 2 2 566.50 1133 637 171 189 50 77 9
.................................................................TGAGGTAGGAGGTTGTATGGTT........................................................................................................... 22 1 2 554.00 1108 1033 18 32 23 0 2
.................................................................TGAGGTAGCAGGTTGTATGGTT........................................................................................................... 22 1 1 543.00 543 356 100 62 17 8 0
..................................................................GAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 22 1 1 525.00 525 367 68 58 30 0 2
.................................................................TGAGGTAGTGGGTTGTATGGTT........................................................................................................... 22 1 1 487.00 487 302 89 73 17 6 0
.................................................................TAAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 479.00 479 294 87 90 8 0 0
.................................................................TGAGGTAGTAGGTTGCGTGGTT........................................................................................................... 22 2 1 471.00 471 384 31 39 15 2 0
.................................................................TGAGGTAGTAGGTTGTACGGTT........................................................................................................... 22 1 1 469.00 469 336 68 53 3 9 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAA........................................................................................................ 25 3 1 465.00 465 210 96 107 41 9 2
.................................................................TGAGGTAGTAGGTTGTATGGTG........................................................................................................... 22 1 1 457.00 457 353 25 22 18 37 2
...................................................................AGGTAGTAGGTTGTATGGTT........................................................................................................... 20 0 1 427.00 427 382 4 13 21 6 1
.................................................................TGAGGTAGTAGGTTGTTTGGTT........................................................................................................... 22 1 1 426.00 426 333 39 35 17 2 0
.................................................................AGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 425.00 425 210 105 97 13 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAAA......................................................................................................... 24 3 1 420.00 420 210 81 98 25 4 2
.................................................................TGAGGTAGTAGGTTGTATGGTTTA......................................................................................................... 24 0 1 416.00 416 286 59 49 16 6 0
.................................................................TGAGGTAGTAGGTTGTGTGGA............................................................................................................ 21 2 4 408.25 1633 1075 187 222 86 41 22
.................................................................TGAGGTCGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 407.00 407 371 7 1 27 1 0
.................................................................TGAGGTAGTAGGTTGTATGA............................................................................................................. 20 1 1 404.00 404 104 88 166 6 39 1
.................................................................TGAGGTAGTAGGTCGTATGGTT........................................................................................................... 22 1 1 392.00 392 236 77 60 16 3 0
.................................................................TGAGGTAGTAGGTTGTATGGTTC.......................................................................................................... 23 1 1 391.00 391 135 118 121 8 7 2
.................................................................TGAGGTAGTAGGTTGTATGGTC........................................................................................................... 22 1 1 380.00 380 231 73 62 6 7 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 25 2 1 373.00 373 181 93 74 20 3 2
.................................................................TGCGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 361.00 361 346 2 3 9 1 0
..................................................................GAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 22 1 1 355.00 355 298 18 17 18 2 2
.................................................................TGCGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 352.00 352 324 1 2 25 0 0
.................................................................TGAGGTAGTAGGTTGTATCGTT........................................................................................................... 22 1 3 351.00 1053 903 24 29 78 11 8
.................................................................TGAGGTAGTAGGTTGTGTGTTT........................................................................................................... 22 2 1 337.00 337 302 5 14 16 0 0
.................................................................TGAGGGAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 336.00 336 276 9 18 29 4 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAT........................................................................................................ 25 3 1 327.00 327 116 102 83 20 6 0
.................................................................TGCGGTAGTAGGTTGTGTGGT............................................................................................................ 21 2 1 325.00 325 313 0 1 11 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 22 0 1 323.00 323 231 31 43 18 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTTT........................................................................................................ 25 3 3 322.67 968 307 302 294 45 13 7
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAA........................................................................................................ 25 2 1 322.00 322 194 48 47 31 2 0
.................................................................TGATGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 313.00 313 254 22 20 17 0 0
................................................................CTGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 23 2 2 302.00 604 241 154 173 32 2 2
.................................................................TGGGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 297.00 297 209 34 46 7 0 1
.................................................................TGAGGTAGTAGGTTGTGT............................................................................................................... 18 1 9 291.78 2626 2304 72 92 92 40 26
.................................................................TTAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 278.00 278 212 22 22 19 2 1
..................................................................GAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 22 2 1 270.00 270 235 10 16 9 0 0
.................................................................TGAGGTAGTAGGTTGTATGGAT........................................................................................................... 22 1 1 267.00 267 207 17 19 16 6 2
.................................................................TGAGGTAGCAGGTTGTGTGGTT........................................................................................................... 22 2 1 266.00 266 197 29 22 15 3 0
.................................................................TGAGGTAGTAGGTTGTGTGGAT........................................................................................................... 22 2 1 262.00 262 201 17 15 20 7 2
..................................................................GAGGTAGTAGGTTGTGTGGT............................................................................................................ 20 1 1 261.00 261 133 49 61 13 4 1
.................................................................TGAGGTAGTAGGTTGTATGTTT........................................................................................................... 22 1 1 257.00 257 204 22 17 11 3 0
................................................................CTGAGGTAGTAGGTTGTATGGT............................................................................................................ 22 1 1 250.00 250 131 48 55 16 0 0
.................................................................TGAGGTAGTAGGTTGTGTGTT............................................................................................................ 21 2 1 244.00 244 218 12 7 7 0 0
.................................................................TGAGGTAGTAGGGTGTATGGTT........................................................................................................... 22 1 1 244.00 244 186 28 12 17 1 0
.................................................................TGAGGTAGTAGGTTTTATGGTT........................................................................................................... 22 1 1 244.00 244 156 26 54 6 1 1
.................................................................TGAGGTAGTAGGTTGTGCGGTT........................................................................................................... 22 2 2 240.50 481 303 85 72 12 6 3
.................................................................TGAGGTAGTAGGTTGTGTGGTG........................................................................................................... 22 2 2 240.00 480 430 8 14 17 8 3
.................................................................TGAGGCAGTAGGTTGTGTGGTT........................................................................................................... 22 2 2 240.00 480 350 39 35 37 17 2
.................................................................TGAGGAAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 240.00 240 161 22 16 31 9 1
.................................................................TGAGGTATTAGGTTGTATGGTT........................................................................................................... 22 1 1 229.00 229 181 24 18 5 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTAG.......................................................................................................... 23 2 1 228.00 228 190 4 7 9 14 4
.................................................................TGAGGTAGTTGGTTGTATGGTT........................................................................................................... 22 1 1 226.00 226 112 49 61 4 0 0
.................................................................CGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 223.00 223 142 28 28 23 1 1
.................................................................TGAGGTAGTAGGTTGTGTGGTGT.......................................................................................................... 23 2 1 217.00 217 171 8 17 14 7 0
.................................................................TGAGGTAGTATGTTGTATGGTT........................................................................................................... 22 1 1 211.00 211 168 14 15 10 4 0
.................................................................TGAGGTAGTAGGTTATATGGTT........................................................................................................... 22 1 1 209.00 209 113 46 44 5 1 0
.................................................................TGAGGTAGTAGGTTGTATGTT............................................................................................................ 21 1 1 207.00 207 158 15 19 14 1 0
.................................................................TGAGGTAGAAGGTTGTATGGTT........................................................................................................... 22 1 1 205.00 205 121 38 35 9 2 0
.................................................................TGATGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 198.00 198 174 3 7 13 1 0
.................................................................TGTGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 195.00 195 123 38 27 6 1 0
.................................................................TGAGGTAGTAGGTTGTATGT............................................................................................................. 20 1 1 193.00 193 101 33 43 3 10 3
.................................................................TGAGGTAGTAGGTTGTGGGGTT........................................................................................................... 22 2 1 190.00 190 80 54 46 9 1 0
.................................................................TGAGTTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 185.00 185 161 9 5 10 0 0
.................................................................TGAGGTAGTAGGTCGTGTGGTT........................................................................................................... 22 2 1 185.00 185 132 19 26 7 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAA........................................................................................................ 25 2 1 182.00 182 65 52 45 16 4 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAC......................................................................................................... 24 3 1 182.00 182 74 48 52 5 2 1
.................................................................TGAGGCAGTAGGTTGTATGGT............................................................................................................ 21 1 1 181.00 181 130 12 19 10 8 2
.................................................................TGAGGTAGTAGGTTGT................................................................................................................. 16 0 3 179.00 537 456 9 14 15 35 8
.................................................................TGAGGTAGTAGGTTGGATGGTT........................................................................................................... 22 1 1 176.00 176 142 17 14 3 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAG.......................................................................................................... 23 3 5 172.20 861 740 21 30 29 30 11
.................................................................TGCGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 1 172.00 172 165 0 0 7 0 0
..................................................................GAGGTAGTAGGTTGTATGGTA........................................................................................................... 21 1 1 171.00 171 123 21 24 3 0 0
.................................................................TGAGGTAGTAGGATGTATGGTT........................................................................................................... 22 1 1 168.00 168 116 34 14 2 1 1
.................................................................TGAGGTAGTAGGTTGTGTGGGTT.......................................................................................................... 23 2 1 166.00 166 122 16 15 8 5 0
.................................................................TGAGGTAGTAGGTTGTGTGGTATA......................................................................................................... 24 2 1 165.00 165 143 3 8 8 1 2
.................................................................TGAGGTAGTAGGTTGTGTGGGT........................................................................................................... 22 2 2 164.00 328 266 27 21 13 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTGA......................................................................................................... 24 2 2 160.00 320 196 37 40 11 33 3
.................................................................TGAGGTAGTCGGTTGTGTGGTTT.......................................................................................................... 23 2 1 158.00 158 144 1 1 11 1 0
................................................................CTGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 24 2 1 158.00 158 92 28 30 7 1 0
.................................................................TGAGGTACTAGGTTGTATGGTT........................................................................................................... 22 1 1 146.00 146 95 23 17 6 5 0
.................................................................TGAGGTAGTAGGTTGTAAGGTT........................................................................................................... 22 1 1 146.00 146 74 34 33 1 4 0
..................................................................GAGGTAGTAGGTTGTATGG............................................................................................................. 19 0 1 145.00 145 40 57 44 4 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTC......................................................................................................... 24 2 1 142.00 142 60 36 40 3 2 1
.................................................................TGAAGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 141.00 141 97 21 21 2 0 0
.................................................................TGAGGTAGTAGGTTGTG................................................................................................................ 17 1 18 139.06 2503 2064 6 11 52 263 107
.................................................................TGAGATAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 139.00 139 85 30 21 2 1 0
.................................................................TGAGGTAGTAGATTGTGTGGTT........................................................................................................... 22 2 3 138.67 416 92 172 152 0 0 0
.................................................................TGAGGTAGTCGGTTGTATGGT............................................................................................................ 21 1 1 137.00 137 128 1 1 7 0 0
.................................................................TGAGGTTGTAGGTTGTATGGTT........................................................................................................... 22 1 1 131.00 131 87 20 20 1 2 1
.................................................................TGAGGTAATAGGTTGTATGGTT........................................................................................................... 22 1 1 131.00 131 73 30 22 5 1 0
.................................................................TGCGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 1 130.00 130 125 1 1 3 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAG......................................................................................................... 24 2 1 129.00 129 82 16 19 5 6 1
.................................................................TGAGGTAGTAGGTTGTATGGTAAA......................................................................................................... 24 2 1 126.00 126 50 30 36 2 8 0
.................................................................TGAGGTAGTAGGTAGTATGGTT........................................................................................................... 22 1 1 125.00 125 73 28 23 0 1 0
.................................................................TGAGGTAGTCGGTTGTGTGGT............................................................................................................ 21 2 1 125.00 125 116 1 1 6 0 1
.................................................................TGAGGTAGTAGGTTCTATGGTT........................................................................................................... 22 1 1 124.00 124 69 29 16 6 3 1
.................................................................TGAGGTAGTAGGTTGTATTGTT........................................................................................................... 22 1 4 123.00 492 335 66 68 18 3 2
.................................................................TGAGGTAGTAGGTTGTGTGA............................................................................................................. 20 2 11 121.18 1333 576 336 337 35 32 17
.................................................................TGAGGCAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 121.00 121 93 7 7 10 2 2
.................................................................TGAGGTAGTAGGTTGAATGGTT........................................................................................................... 22 1 1 121.00 121 81 18 15 5 2 0
.................................................................TGAGTTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 120.00 120 101 5 4 9 1 0
.................................................................GGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 118.00 118 86 19 10 3 0 0
.................................................................TGAGGTCGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 112.00 112 98 2 1 11 0 0
.................................................................TGAGGTAGTAGGTTGCGTGGTTT.......................................................................................................... 23 2 1 110.00 110 91 6 5 7 1 0
.................................................................TGAGGTAGTAGGTTGCATGGT............................................................................................................ 21 1 1 109.00 109 85 18 4 2 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGCT........................................................................................................... 22 2 2 108.50 217 158 18 22 17 2 0
.................................................................TGAGGTAGTAGATTGTATGGT............................................................................................................ 21 1 3 105.67 317 105 105 104 1 1 1
.................................................................TGAGGTGGTAGGTTGTATGGT............................................................................................................ 21 1 1 103.00 103 77 14 8 3 1 0
.................................................................TGAGGTAGTAGCTTGTATGGTT........................................................................................................... 22 1 1 103.00 103 84 4 7 5 3 0
.................................................................TGAGGTAGTAGGTTGTATGGG............................................................................................................ 21 1 1 102.00 102 83 4 3 7 5 0
.................................................................TGAGGTAGTAAGTTGTATGGTT........................................................................................................... 22 1 2 97.00 194 123 31 31 6 2 1
.................................................................TGAGGTAGTAGGTTGTGTGGTC........................................................................................................... 22 2 2 97.00 194 139 21 24 6 3 1
................................................................CTGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 24 2 1 96.00 96 65 5 15 11 0 0
.................................................................TGAGGTAGTAGGTTGTGCGGTTT.......................................................................................................... 23 2 1 96.00 96 72 9 11 4 0 0
.................................................................TGAGGTAGTAGTTTGTATGGT............................................................................................................ 21 1 1 96.00 96 55 21 19 1 0 0
.................................................................TGAGGTAGTAGGTTGTATGATT........................................................................................................... 22 1 1 95.00 95 50 27 17 0 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTGA......................................................................................................... 24 1 1 94.00 94 57 9 11 4 11 2
.................................................................TGAGGTAGTAGGTTGCGTGGT............................................................................................................ 21 2 1 94.00 94 72 6 9 5 2 0
.................................................................TGAGGTAGGAGGTTGTGTGGTT........................................................................................................... 22 2 4 93.75 375 353 8 10 4 0 0
....................................................................GGTAGTAGGTTGTATGGTT........................................................................................................... 19 0 1 93.00 93 60 10 2 3 18 0
.................................................................TGAGGTAGTAGGTTGTCTGGT............................................................................................................ 21 1 1 91.00 91 78 2 8 2 1 0
.................................................................TGAGGTCGTAGGTTGTATGGT............................................................................................................ 21 1 1 89.00 89 85 2 1 1 0 0
.................................................................TGAGGTAGTAGGTTGTATGGC............................................................................................................ 21 1 1 88.00 88 57 17 11 1 0 2
.................................................................TGAGGTAGTACGTTGTATGGTT........................................................................................................... 22 1 1 88.00 88 67 13 6 2 0 0
.................................................................TGCGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 3 2 87.50 175 160 0 0 14 1 0
.................................................................TGAGGTAGTTGGTTGTGTGGTT........................................................................................................... 22 2 1 87.00 87 56 12 14 4 1 0
................................................................CTGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 24 1 1 87.00 87 45 17 20 5 0 0
.................................................................TGACGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 86.00 86 60 14 8 4 0 0
.................................................................TGAGGTAGTAGGCTGTATGGT............................................................................................................ 21 1 1 86.00 86 61 11 9 2 3 0
.................................................................TGAGGTAGTAGGTTGTGTGGTATT......................................................................................................... 24 3 3 85.67 257 158 36 34 20 7 2
.................................................................TGAGGTAGAAGGTTGTGTGGTT........................................................................................................... 22 2 1 85.00 85 62 13 6 3 1 0
.................................................................TGAGGTAGTCGGTTGTGTGGTTA.......................................................................................................... 23 3 1 85.00 85 79 1 0 5 0 0
................................................................TTGAGGTAGTAGGTTGTATGGTA........................................................................................................... 23 1 1 85.00 85 55 5 16 6 1 2
.................................................................TGAGGTAGTAGGTTGTGTGGTTTG......................................................................................................... 24 2 1 84.00 84 55 10 6 6 7 0
.................................................................TGAGGTGGTAGGTTGTGTGGTT........................................................................................................... 22 2 4 83.50 334 244 37 37 12 4 0
.................................................................AGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 2 82.00 164 93 22 41 8 0 0
.................................................................CGAGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 81.00 81 54 12 11 4 0 0
.................................................................TGGGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 80.00 80 60 6 8 5 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTGA.......................................................................................................... 23 2 1 80.00 80 55 9 7 5 4 0
.................................................................TGAGGTAGCAGGTTGTATGGT............................................................................................................ 21 1 1 80.00 80 58 7 11 4 0 0
.................................................................TGAGGTAGTAGGTTTTGTGGTT........................................................................................................... 22 2 1 80.00 80 44 9 25 1 1 0
.................................................................TGAGGTAGTAGGTTGTGTGT............................................................................................................. 20 2 7 77.14 540 325 95 77 30 6 7
.................................................................TGAGGTAGTAGGTTGTATGGGTT.......................................................................................................... 23 1 1 76.00 76 61 6 4 3 2 0
.................................................................TAAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 3 75.00 225 147 37 34 6 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGCTT.......................................................................................................... 23 2 1 73.00 73 48 7 4 14 0 0
.................................................................TGAGGTAGGAGGTTGTATGGT............................................................................................................ 21 1 2 73.00 146 133 5 4 4 0 0
.................................................................TCAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 73.00 73 48 12 10 0 2 1
.................................................................TGGGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 73.00 73 57 8 5 2 1 0
.................................................................TGAGCTAGTAGGTTGTATGGTT........................................................................................................... 22 1 1 72.00 72 44 12 13 1 1 1
.................................................................TGAGGTAGCAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 71.00 71 55 6 3 7 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTGT.......................................................................................................... 23 1 1 71.00 71 54 2 11 2 2 0
.................................................................TGAGGTAGTAGGCTGTGTGGTTT.......................................................................................................... 23 2 1 71.00 71 50 10 5 5 1 0
.................................................................TGAGGTAGTCGGTTGTATGGTTT.......................................................................................................... 23 1 1 70.00 70 69 0 0 1 0 0
.................................................................TAAGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 70.00 70 45 12 12 1 0 0
.................................................................TGAGGTAGTAGGATGTGTGGTT........................................................................................................... 22 2 1 69.00 69 43 12 10 4 0 0
.................................................................TGAGGTAGTAGGTTGTGTGTTTT.......................................................................................................... 23 2 1 69.00 69 55 4 3 7 0 0
.................................................................AGAGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 69.00 69 34 13 21 1 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGAA........................................................................................................... 22 3 13 68.31 888 533 97 141 63 34 20
.................................................................TGAGGCAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 1 68.00 68 51 4 1 8 4 0
.................................................................TGCGGTAGTAGGTTGTATGGTA........................................................................................................... 22 2 1 68.00 68 67 0 0 1 0 0
.................................................................TGAGGTAGTAGGTTGTTTGGTTT.......................................................................................................... 23 1 1 67.00 67 61 1 3 2 0 0
.................................................................CGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 66.00 66 47 8 5 6 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTAT.......................................................................................................... 22 2 2 65.00 130 114 3 3 10 0 0
.................................................................TGAGGTAGTAGGTTGTTTGGT............................................................................................................ 21 1 1 65.00 65 55 3 3 3 1 0
................................................................CTGAGGTAGTAGGTTGTGTGGT............................................................................................................ 22 2 2 65.00 130 53 27 41 9 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAC......................................................................................................... 24 2 1 65.00 65 28 21 15 0 1 0
..................................................................TAGGTAGTAGGTTGTATGGTT........................................................................................................... 21 1 1 65.00 65 58 1 5 0 1 0
..................................................................GAGGTAGTAGGTTGTATGGTAA.......................................................................................................... 22 2 1 64.00 64 56 2 4 2 0 0
.................................................................TGAGGTAGGAGGTTGTATGGTTT.......................................................................................................... 23 1 1 64.00 64 61 1 1 1 0 0
.................................................................TGAGGTAGTAGGTTGGGTGGTT........................................................................................................... 22 2 3 63.33 190 155 12 18 5 0 0
.................................................................TGAAGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 63.00 63 45 6 9 2 1 0
.................................................................TGAGGCAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 1 63.00 63 43 6 5 8 1 0
.................................................................TGAGGTAGTAGGTCGTATGGT............................................................................................................ 21 1 1 62.00 62 42 11 7 2 0 0
.................................................................TGAGGTAGTAGGTTGTACGGT............................................................................................................ 21 1 1 62.00 62 40 8 10 1 3 0
.................................................................TGAGGCAGTAGGTTGTGTGGT............................................................................................................ 21 2 2 61.50 123 83 9 15 15 1 0
.................................................................TGAGGTAGTAGGCTGTGTGGTT........................................................................................................... 22 2 4 61.25 245 167 38 22 13 4 1
.................................................................TGAGGTAGTAGATTGTGTGGTTT.......................................................................................................... 23 2 2 60.50 121 20 51 48 2 0 0
...................................................................AGGTAGTAGGTTGTGTGGTT........................................................................................................... 20 1 2 59.50 119 110 2 2 4 1 0
.................................................................TGAGGTAGTGGGTTGTATGGT............................................................................................................ 21 1 1 59.00 59 42 8 9 0 0 0
.................................................................TGGGGTAGTAGGTTGTGTGGT............................................................................................................ 21 2 1 58.00 58 36 13 5 4 0 0
.................................................................TGAGGTAGTAGATTGTATGGTTT.......................................................................................................... 23 1 2 57.00 114 37 35 41 1 0 0
................................................................TTGAGGTAGTAGGTTGTATGG............................................................................................................. 21 0 1 57.00 57 17 11 20 1 6 2
.................................................................TGATGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 57.00 57 52 0 0 5 0 0
.................................................................TGAGGTAGTAGTTTGTGTGGTT........................................................................................................... 22 2 4 56.75 227 105 67 48 6 1 0
.................................................................TGAGGTCGTAGGTTGTGTGGTTA.......................................................................................................... 23 3 1 56.00 56 52 0 0 4 0 0
.................................................................TGAGGTAGTGGGTTGTGTGGTT........................................................................................................... 22 2 4 56.00 224 167 23 23 7 4 0
...............................................................GTTGAGGTAGTAGGTTGTATGGT............................................................................................................ 23 0 1 54.00 54 29 13 8 3 0 1
.................................................................TGAGGTAGTAGGTTGTATT.............................................................................................................. 19 1 5 52.40 262 163 17 23 19 23 17
.................................................................TGAGGTAGTCGGTTGTATGGTTA.......................................................................................................... 23 2 1 52.00 52 49 0 1 2 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAG........................................................................................................ 25 2 1 52.00 52 24 8 11 4 3 2
.................................................................TGAGGTAGTAGGTTGCGTGGTTA.......................................................................................................... 23 3 1 52.00 52 44 1 6 1 0 0
.................................................................TGCGGTAGTAGGTTGTATGG............................................................................................................. 20 1 1 51.00 51 50 0 0 1 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTGT......................................................................................................... 24 3 7 50.29 352 171 53 57 8 56 7
.................................................................TGAGGTAGTAGGTGGTATGGTT........................................................................................................... 22 1 1 50.00 50 35 5 6 3 1 0
.................................................................TGAGGTAGGAGGTTGTGTGGTTT.......................................................................................................... 23 2 2 49.50 99 90 1 3 5 0 0
.................................................................TGAGGTAGTAGGTCGTGTGGT............................................................................................................ 21 2 1 49.00 49 27 14 6 2 0 0
.................................................................TGAGGTAGTAGGTCGTGTGGTTT.......................................................................................................... 23 2 1 49.00 49 36 5 6 2 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAC.......................................................................................................... 23 3 3 49.00 147 86 21 24 8 5 3
.................................................................AGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 1 49.00 49 30 10 6 3 0 0
................................................................CTGAGGTAGTAGGTTGTATGG............................................................................................................. 21 1 1 48.00 48 20 15 10 3 0 0
.....................................................................GTAGTAGGTTGTATGGTT........................................................................................................... 18 0 1 48.00 48 12 9 10 1 15 1
.................................................................TGAGGTAGTAAGTTGTGTGGTT........................................................................................................... 22 2 2 47.50 95 68 14 9 4 0 0
.................................................................TGAGATAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 47.00 47 25 11 8 3 0 0
.................................................................TGAGGTGGTAGGTTGTGTGGTTT.......................................................................................................... 23 2 2 46.50 93 76 3 8 6 0 0
.................................................................TGAGGTAGTAGGTTGCATGGTTT.......................................................................................................... 23 1 1 46.00 46 40 3 3 0 0 0
.................................................................TGAGGTATTAGGTTGTATGGT............................................................................................................ 21 1 1 46.00 46 38 6 0 2 0 0
.................................................................TGAGGTAGTAGGTTGTGAGGTT........................................................................................................... 22 2 2 45.50 91 67 10 11 3 0 0
................................................................CTGAGGTAGTAGGTTGTATGGTA........................................................................................................... 23 2 1 45.00 45 18 5 16 6 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTAC.......................................................................................................... 23 2 1 45.00 45 24 9 6 2 2 2
.................................................................TGAGGTAGTATGTTGTATGGT............................................................................................................ 21 1 1 45.00 45 30 1 11 3 0 0
.................................................................TGAGGTCGTAGGTTGTGTGGT............................................................................................................ 21 2 2 44.50 89 81 1 2 5 0 0
.................................................................TGATGTAGTAGGTTGTATGGT............................................................................................................ 21 1 1 43.00 43 32 2 5 3 1 0
.................................................................TGAGGTAGTAGGTTGTCTGGTTT.......................................................................................................... 23 1 1 43.00 43 36 0 5 2 0 0
.................................................................TGAGGTAGTAGGGTGTGTGGTT........................................................................................................... 22 2 2 43.00 86 69 6 3 8 0 0
.................................................................TGACGTAGTAGGTTGTGTGGTT........................................................................................................... 22 2 1 42.00 42 32 5 3 2 0 0
.................................................................TGAGGTAGAAGGTTGTATGGT............................................................................................................ 21 1 1 42.00 42 25 7 8 2 0 0
..............................................................ATTTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 25 2 1 41.00 41 0 23 18 0 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTCA......................................................................................................... 24 2 1 41.00 41 22 7 9 1 1 1
.................................................................TGAGGGAGTAGGTTGTATGGT............................................................................................................ 21 1 1 40.00 40 33 1 1 4 1 0
.................................................................CGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 3 1 40.00 40 31 3 3 3 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTCT.......................................................................................................... 23 2 2 39.50 79 71 0 5 3 0 0
..............................................................................................................CTGTACAACCTTCTAGCTTTCC.............................................................. 22 0 1 39.00 39 7 5 17 2 7 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAAA....................................................................................................... 26 3 1 39.00 39 18 9 10 2 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTC......................................................................................................... 24 1 1 39.00 39 18 13 7 0 1 0
...............................................................GTTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 24 0 1 39.00 39 14 11 11 0 0 3
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAAA....................................................................................................... 26 2 1 39.00 39 13 6 14 3 2 1
.................................................................TGAGGTAGTAGATTGTATGGTTA.......................................................................................................... 23 2 3 38.00 114 63 24 22 5 0 0
.................................................................TGAGGAAGTAGGTTGTGTGGTT........................................................................................................... 22 2 3 38.00 114 75 6 10 22 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAT........................................................................................................ 25 2 1 38.00 38 14 12 9 0 3 0
.................................................................TGAGGTAGTAGGTTGTTTGGTTA.......................................................................................................... 23 2 1 37.00 37 33 0 0 4 0 0
.................................................................TGAGGTAGTAGGTTGTATGCTT........................................................................................................... 22 1 1 37.00 37 24 5 5 2 1 0
.................................................................TGAGGTCGTAGGTTGTATGGTTT.......................................................................................................... 23 1 1 37.00 37 33 0 2 2 0 0
.................................................................TGGGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 3 1 37.00 37 33 1 3 0 0 0
.................................................................TGAGGTAGTAGGTTGTATGGGA........................................................................................................... 22 2 1 37.00 37 26 5 3 2 1 0
.................................................................TGAGGTAGTAGTTTGTATGGTTA.......................................................................................................... 23 2 1 37.00 37 31 4 2 0 0 0
.................................................................TGAGGTAGTGGGTTGTGTGGTTT.......................................................................................................... 23 2 2 36.50 73 52 5 8 7 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAC........................................................................................................ 25 3 2 36.50 73 8 26 35 1 0 3
.................................................................TGAGGTAGTAGGTTGTAAGGT............................................................................................................ 21 1 1 36.00 36 15 13 7 1 0 0
.................................................................TGAGGTAGTAGGTTGTGCGGT............................................................................................................ 21 2 2 36.00 72 55 9 5 1 0 2
.................................................................TGAGGTAGTAGGTTGTCTGGTTA.......................................................................................................... 23 2 1 35.00 35 31 0 3 1 0 0
.................................................................TGGGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 1 35.00 35 21 5 6 2 0 1
.................................................................TGAGGTAGTAGTTTGTATGGTTT.......................................................................................................... 23 1 1 35.00 35 21 7 4 3 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTAA........................................................................................................ 25 1 1 35.00 35 27 6 0 2 0 0
.................................................................TGAGGTAGGAGGTTGTATGGTTA.......................................................................................................... 23 2 2 34.50 69 65 0 1 3 0 0

Anti-sense strand reads

CCTCCTCGACTGACTTCTATACTATTCCTCAAACTTCGTTGTCACCTTCGACACACGTAGGCCCAACTCCATCATCCAACATACCAAATCTCAATGTGGCACCCTCAATTGACATGTTGGAAGATCGAAAGGAACCTCGTGTGAACTCGGTAGCTCCTTAAGAAGTAGTAAAATTAGACTAGTTCGGATAAAGA

***********************************************.((((((.((((((..(((.(((.(((((((((((((.....((((...)))).....))))))))))))).))).)))..))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR139076

testes
.........................................................................................................CAATTGACATGTTTGATGATGGA.................................................................. 23 3 5 0.40 2 2 0
...........................................................................................................ATTGATATGTTGGATGATCGT.................................................................. 21 3 20 0.05 1 0 1

Generated: 09/01/2015 at 11:26 AM