ID:

rno-mir-99b

 Coordinate:

chr1:59704216-59704285 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.4 -40.4 -40.4

Sense Strand Reads

CCTGGGTTCCTTGGGGAGGAGGGGGCCGGGGGCCCGGACTCCTGGGTCCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTCGGGGGCTCACCATCGCGGCTGGGACCTCCCCGGCCCTCCCCCACCCTCCC
*****************************************.(((((((((((((..(((((((((..(((.(((((((........)))))....)).)))..)))))))))..))))).))))))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
........................................................CACCCGTAGAACCGACCTTGCG............................................................................................ 22 0 1 2459.00 2459 2236 161 62
........................................................CACCCGTAGAACCGACCTTGCGA........................................................................................... 23 1 1 1698.00 1698 1602 55 41
........................................................CACCCGTAGAACCGACCTTGCGT........................................................................................... 23 1 1 1416.00 1416 1369 32 15
........................................................CACCCGTAGAACCGACCTTGC............................................................................................. 21 0 1 727.00 727 586 132 9
........................................................CACCCGTAGAACCGACCTTG.............................................................................................. 20 0 1 241.00 241 203 35 3
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGT..................................................... 23 0 1 146.00 146 146 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGA..................................................... 23 1 1 142.00 142 126 0 16
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTT.................................................... 24 1 1 96.00 96 96 0 0
.........................................................ACCCGTAGAACCGACCTTGCG............................................................................................ 21 0 1 89.00 89 84 5 0
........................................................CACCCGTAGAACCGACCTTGCGAA.......................................................................................... 24 2 1 89.00 89 88 1 0
.........................................................ACCCGTAGAACCGACCTTGCGA........................................................................................... 22 1 1 87.00 87 84 3 0
.........................................................ACCCGTAGAACCGACCTTGCGT........................................................................................... 22 1 1 72.00 72 69 3 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAT.................................................... 24 2 1 68.00 68 66 0 2
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTT................................................... 25 1 1 63.00 63 63 0 0
........................................................CACCCGTAGAACCGACCTTGCGTT.......................................................................................... 24 2 1 57.00 57 56 1 0
........................................................CACCCGTAGAACCGACCTTGCGAT.......................................................................................... 24 2 1 46.00 46 44 2 0
........................................................CACCCGTAGAACCGACCTTGCA............................................................................................ 22 1 1 45.00 45 37 8 0
.......................................................ACACCCGTAGAACCGACCTTGCG............................................................................................ 23 1 1 42.00 42 42 0 0
........................................................CACCCGTAGAACCGACCTTGCGTA.......................................................................................... 24 2 1 41.00 41 30 0 11
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAA.................................................... 24 2 1 39.00 39 38 0 1
........................................................CACCCGTAGAACCGACCTTGCGAAA......................................................................................... 25 3 1 33.00 33 30 3 0
............................................................CGTAGAACCGACCTTGCG............................................................................................ 18 0 1 29.00 29 3 26 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAT................................................... 25 1 1 26.00 26 26 0 0
.........................................................ACCCGTAGAACCGACCTTGC............................................................................................. 20 0 1 25.00 25 22 3 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAA................................................... 25 2 1 23.00 23 23 0 0
........................................................CACCCGTAGAACCGACCTTGCAA........................................................................................... 23 2 1 22.00 22 21 1 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTA.................................................... 24 1 1 20.00 20 20 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAAA................................................... 25 3 1 20.00 20 20 0 0
........................................................CACCCGTAGAACCGACCTTGCGG........................................................................................... 23 0 1 19.00 19 18 0 1
.......................................................ACACCCGTAGAACCGACCTTGCGA........................................................................................... 24 2 1 19.00 19 19 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCAT..................................................... 23 1 1 16.00 16 16 0 0
........................................................CACCCGTAGAACCGACCTT............................................................................................... 19 0 1 16.00 16 7 9 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCG...................................................... 22 0 1 15.00 15 15 0 0
........................................................CACCCGTAGAACCGACCTTGCGTAA......................................................................................... 25 3 1 15.00 15 14 1 0
........................................................CACCCGTAGAACCGCCCTTGCGA........................................................................................... 23 2 1 14.00 14 14 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAAT................................................... 25 2 1 14.00 14 14 0 0
........................................................CACCCGTAGAACCGAC.................................................................................................. 16 0 1 13.00 13 0 13 0
........................................................CACCCGTAGAACCGACCTTGA............................................................................................. 21 1 1 13.00 13 10 3 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGATT................................................... 25 2 1 13.00 13 13 0 0
........................................................CACCCGTAGAACCGACCTTGCGTAT......................................................................................... 25 3 1 12.00 12 11 1 0
...........................................................CCGTAGAACCGACCTTGCG............................................................................................ 19 0 1 12.00 12 1 10 1
........................................................CACCCGTAGAACCGACCTTGCAT........................................................................................... 23 2 1 11.00 11 11 0 0
........................................................CACCCGTAGAACCGCCCTTGCG............................................................................................ 22 1 1 11.00 11 10 0 1
.........................................................ACCCGTAGAACCGACCTTGCGC........................................................................................... 22 1 1 10.00 10 10 0 0
........................................................CACCCGTAGAACCGCCCTTGCGT........................................................................................... 23 2 1 10.00 10 10 0 0
.........................................................ACCCGTAGAACCGACCTTGCCG........................................................................................... 22 1 1 10.00 10 0 0 10
............................................................CGTAGAACCGACCTTGC............................................................................................. 17 0 1 10.00 10 0 10 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTTT.................................................. 26 2 1 10.00 10 9 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTT.................................................... 24 2 1 9.00 9 9 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCAA..................................................... 23 2 1 9.00 9 9 0 0
........................................................CACCCGTAGAACCGACCTTGCGTTT......................................................................................... 25 3 1 9.00 9 9 0 0
.............................................................GTAGAACCGACCTTGCG............................................................................................ 17 0 1 9.00 9 0 9 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTAT................................................... 24 1 1 9.00 9 9 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTA................................................... 25 2 1 9.00 9 9 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTAT.................................................... 24 3 2 8.50 17 17 0 0
..........................................................CCCGTAGAACCGACCTTGCGT........................................................................................... 21 1 1 8.00 8 8 0 0
........................................................CACCCGTAGAACCGACCTTGT............................................................................................. 21 1 1 8.00 8 8 0 0
........................................................CACCCGTAGAACCGACCTTGCT............................................................................................ 22 1 1 8.00 8 7 1 0
........................................................CACCCGTAGAACCGACCTTGCGC........................................................................................... 23 1 1 7.00 7 6 1 0
.........................................................ACCCGTAGAACCGACCTTG.............................................................................................. 19 0 1 7.00 7 6 1 0
........................................................CACCCGTAGAACCGACC................................................................................................. 17 0 1 7.00 7 0 7 0
........................................................CACCCGTAGAACCGACATTGCG............................................................................................ 22 1 1 6.00 6 6 0 0
.......................................................ACACCCGTAGAACCGACCTTGCGT........................................................................................... 24 2 1 6.00 6 6 0 0
........................................................AACCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 6.00 6 6 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTAT.................................................. 26 3 1 6.00 6 6 0 0
........................................................CACCCGTAGAACCGACCTTGCGAG.......................................................................................... 24 1 1 6.00 6 5 1 0
........................................................CACCCGTAGAACCAACCTTGCG............................................................................................ 22 1 1 6.00 6 5 0 1
........................................................CACCCGTAGAACCGACCTTGCCT........................................................................................... 23 2 1 5.00 5 4 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCC....................................................... 21 0 1 5.00 5 5 0 0
........................................................CACCCGTAGACCCGACCTTGCG............................................................................................ 22 1 1 5.00 5 4 0 1
..........................................................CCCGTAGAACCGACCTTGCG............................................................................................ 20 0 1 5.00 5 5 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTA..................................................... 23 2 1 5.00 5 5 0 0
........................................................CACCCGTAGAACCGACCTTGCGAAG......................................................................................... 25 2 1 5.00 5 5 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCT...................................................... 22 1 1 5.00 5 5 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAAA.................................................. 26 3 1 5.00 5 5 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTTT................................................... 25 2 1 5.00 5 4 0 1
.............................................................GTAGAACCGACCTTGC............................................................................................. 16 0 1 5.00 5 0 5 0
...........................................................CCGTAGAACCGACCTTGC............................................................................................. 18 0 1 5.00 5 1 4 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTT..................................................... 23 1 1 5.00 5 5 0 0
.......................................................GCACCCGTAGAACCGACCTTGC............................................................................................. 22 1 1 5.00 5 5 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTT.................................................... 23 1 1 5.00 5 5 0 0
........................................................CACCCGTAGAACCTACCTTGC............................................................................................. 21 1 1 4.00 4 3 0 1
.........................................................ACCCGTAGAACCGACCTTGCGAA.......................................................................................... 23 2 1 4.00 4 4 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTAA.................................................... 24 3 1 4.00 4 4 0 0
..........................................................CCCGTAGAACCGACCTTGCGA........................................................................................... 21 1 1 4.00 4 4 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGA..................................................... 22 1 1 4.00 4 4 0 0
......................................................AACACCCGTAGAACCGACCTTGCG............................................................................................ 24 2 1 4.00 4 4 0 0
........................................................CAACCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 4.00 4 3 1 0
........................................................CACCCGTCGAACCGACCTTGCG............................................................................................ 22 1 1 4.00 4 4 0 0
......................................................AACACCCGTAGAACCGACCTTGCGA........................................................................................... 25 3 1 4.00 4 3 1 0
........................................................CACCCGTAGAACCGACCTTGCGAC.......................................................................................... 24 2 1 4.00 4 4 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCCG..................................................... 23 2 1 4.00 4 0 0 4
..............................................................................................CAAGCTCGTGTCTGTGGGT......................................................... 19 0 1 4.00 4 3 1 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTTT................................................... 24 1 1 4.00 4 4 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAAG................................................... 25 3 1 4.00 4 4 0 0
............................................................CGTAGAACCGACCTTGCGA........................................................................................... 19 1 1 4.00 4 1 3 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCATT.................................................... 24 2 1 4.00 4 4 0 0
.........................................................ACCCGTAGAACCGACCTTGCGGTTT........................................................................................ 25 3 1 4.00 4 4 0 0
........................................................CACCCGTAGAACCGACCTTGCGAAT......................................................................................... 25 3 1 3.00 3 2 0 1
........................................................CACCCGTAGAACCGATCTTGCG............................................................................................ 22 1 1 3.00 3 3 0 0
........................................................CACCCGTCGAACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTTGAGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAGCCGACCTTGCG............................................................................................ 22 1 1 3.00 3 2 0 1
...........................................................CCGTAGAACCGACCTTGCGA........................................................................................... 20 1 1 3.00 3 1 2 0
.......................................................ACACCCGTAGAACCGACCTTGCGG........................................................................................... 24 1 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCTTT..................................................... 23 2 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCTATA.................................................... 24 3 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTAAT................................................... 25 3 1 3.00 3 3 0 0
........................................................CACCCGGAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTTGCGGGGCCT...................................................................................... 28 0 1 3.00 3 3 0 0
........................................................CACCCGTAGACCCGACCTTGCGT........................................................................................... 23 2 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGATTT.................................................. 26 3 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGCCCTTGCGAA.......................................................................................... 24 3 1 3.00 3 3 0 0
........................................................CACCCGCAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGGCCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................TACCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................AACCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTTGCTTT.......................................................................................... 24 3 1 3.00 3 3 0 0
........................................................CACCCGAAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTATT................................................... 25 3 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTTGCCA........................................................................................... 23 2 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCAAT.................................................... 24 3 3 3.00 9 9 0 0
.........................................................ACCCGTAGAACCGAC.................................................................................................. 15 0 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGGA.................................................... 24 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAAACGACCTTGCG............................................................................................ 22 1 1 3.00 3 3 0 0
.............................................................................................ACAAGCTCGTGTCTGTGGGTCCGTTT................................................... 26 1 1 3.00 3 3 0 0
........................................................CACCCATAGAACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CAGCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 3.00 3 2 1 0
........................................................CACCCGTAGAACCTACCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTAGCG............................................................................................ 22 1 1 3.00 3 3 0 0
..........................................................CCCGTAGAACCGACCTTGC............................................................................................. 19 0 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCGACCTTGCGATT......................................................................................... 25 3 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTAA.................................................. 26 3 1 3.00 3 3 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCATTT................................................... 25 2 1 3.00 3 0 0 3
........................................................CACCCGTAGAACCAACCTTGC............................................................................................. 21 1 1 3.00 3 3 0 0
........................................................CACCCGTAGACCCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 3 0 0
........................................................CACCCGTAGAACCAACCTTGCGT........................................................................................... 23 2 1 3.00 3 3 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCAT...................................................... 21 2 1 2.00 2 2 0 0
.......................................................ACACCCGTAGAACCGACCTTGCAA........................................................................................... 24 3 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGAG............................................................................................ 22 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACGTTGCG............................................................................................ 22 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACTGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCTT..................................................... 22 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCGTTA......................................................................................... 25 3 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAGT................................................... 25 1 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAAA......................................................................................... 24 3 1 2.00 2 2 0 0
.......................................................ACACCCGTAGAACCGACCTTGA............................................................................................. 22 2 1 2.00 2 0 2 0
.......................................................ACACCCGTAGAACCGACCTTGCGAA.......................................................................................... 25 3 1 2.00 2 1 1 0
.........................................................ACCCGTAGAACCGACCTTGCC............................................................................................ 21 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTCGC............................................................................................. 21 1 1 2.00 2 0 2 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTTA................................................... 25 3 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCGTT.......................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGTGA........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACTCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CAGCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 2.00 2 1 1 0
........................................................CACCCGTATAACCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 1 0
........................................................CACCCGTAGAACCGACCTTA.............................................................................................. 20 1 1 2.00 2 2 0 0
.................................................................................................GCTCGTGTCTGTGGGTCCG...................................................... 19 0 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACTTTGCG............................................................................................ 22 1 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTC........................................................ 20 0 1 2.00 2 2 0 0
............................................................CGTAGAACCGACCTTGCGCACC........................................................................................ 22 3 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCTT........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACACGTAGAACCGCCCTTGCGT........................................................................................... 23 3 1 2.00 2 2 0 0
.........................................................CCCCGTAGAACCGACCTTGCG............................................................................................ 21 1 1 2.00 2 1 1 0
........................................................AACCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTG.................................................... 24 0 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCCACCTTGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCGAAGA........................................................................................ 26 3 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACATTG.............................................................................................. 20 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCGACA......................................................................................... 25 3 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAC.......................................................................................... 23 2 1 2.00 2 2 0 0
............................................................CGTAGAACCGACCTTGCGT........................................................................................... 19 1 1 2.00 2 1 1 0
..................................................GGGTCGCACCCGTAGAACCGACCTTGC............................................................................................. 27 3 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGCCCTTGCGT........................................................................................... 22 2 1 2.00 2 2 0 0
........................................................TACCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 2 0 0
........................................................CGCCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCA............................................................................................ 21 1 1 2.00 2 1 1 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGGT.................................................... 24 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGTCCTTGC............................................................................................. 21 1 1 2.00 2 1 1 0
........................................................CACCCGTAGAAACGACCTTGC............................................................................................. 21 1 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAAC......................................................................................... 24 3 1 2.00 2 2 0 0
........................................................CTCCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 1 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTTTC.................................................. 25 1 1 2.00 2 2 0 0
........................................................CACACGTAGAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 1 1 0
........................................................CACCCGTAGAAGCGACCTTGCG............................................................................................ 22 1 1 2.00 2 2 0 0
............................................................CGTAGAACCGACCTTGCA............................................................................................ 18 1 1 2.00 2 0 2 0
........................................................CACCCGTAGAATCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTA.................................................... 24 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGTCCTTGCG............................................................................................ 22 1 1 2.00 2 0 2 0
.......................................................ACACCCGTAGAACCGACCTT............................................................................................... 20 1 1 2.00 2 0 2 0
........................................................CACCCGTCGAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCC............................................................................................ 22 1 1 2.00 2 1 1 0
.........................................................ACCCGTAGAACTGACCTTGCGT........................................................................................... 22 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACAGACCTTGCG............................................................................................ 22 1 1 2.00 2 2 0 0
........................................................CACCAGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCAGGTTC....................................................................................... 27 3 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACTTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGCAGAACCGACCTTG.............................................................................................. 20 1 1 2.00 2 2 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAAT......................................................................................... 24 3 1 2.00 2 2 0 0
........................................................CATCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACATTGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
.............................................................................................ACAAGCTCGTGTCTGTGGGTCCGT..................................................... 24 0 1 2.00 2 2 0 0
........................................................CACCCGTAGAGCCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
........................................................CACCCGTAGAACCGACCTCGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTATAT................................................. 27 3 1 2.00 2 2 0 0
........................................................CACCCGTCGAACCGACCTTG.............................................................................................. 20 1 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCATAA................................................... 25 3 1 2.00 2 2 0 0
........................................................CACCCGTAGAACAGACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
.......................................................CCACCCGTAGAACCGACCTTGCG............................................................................................ 23 0 1 2.00 2 2 0 0
........................................................CACCAGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCA...................................................... 22 1 1 2.00 2 2 0 0
........................................................CACCCGTAGAAACGACCTTGCGA........................................................................................... 23 2 1 2.00 2 2 0 0
..................................................GGGTCGCACCCGTAGAACCGACCTTGCG............................................................................................ 28 3 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTGT................................................... 25 0 1 2.00 2 2 0 0
.....................................................AAACACCCGTAGAACCGACCTTGCG............................................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................CACGCTCGTGTCTGTGGGTCCGTTT................................................... 25 2 1 2.00 2 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCAAA.................................................... 24 3 4 2.00 8 8 0 0
........................................................CACCCGTAGAACCCACCTTGCGT........................................................................................... 23 2 1 2.00 2 2 0 0
.............................................................GTAGAACCGACCTTG.............................................................................................. 15 0 2 1.50 3 0 3 0
........................................................CACCCGTAGAACCGACCTCGCG............................................................................................ 22 1 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCCACCTTGCC............................................................................................ 22 2 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCGAACTTGCGT........................................................................................... 22 2 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACCTTGCGCTT......................................................................................... 25 3 1 1.00 1 1 0 0
......................................................TTCACCCGTAGAACCGACCTTGCG............................................................................................ 24 2 1 1.00 1 1 0 0
........................................................CACCCGTAGAATCGACCTTGC............................................................................................. 21 1 1 1.00 1 1 0 0
........................................................CACCCGTCGAACCGACCTTGCGAA.......................................................................................... 24 3 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCGACCTTGCGTTT......................................................................................... 24 3 1 1.00 1 1 0 0
.........................................................ACCCGTAGCACCGACCTTGCGA........................................................................................... 22 2 1 1.00 1 1 0 0
.............................................................................................ACAAGCTCGTGTCTGTGGGTCCG...................................................... 23 0 1 1.00 1 1 0 0
........................................................CACCCTTAGAACCGACCTTGCGA........................................................................................... 23 2 1 1.00 1 0 1 0
........................................................CACACGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................CACACAAGCTCGTGTCTGTGGGTTAT...................................................... 26 3 1 1.00 1 1 0 0
........................................................CAACCGTAGAACCGACCTTGCA............................................................................................ 22 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTCGGTCCGTT.................................................... 24 2 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGCCCTTGC............................................................................................. 21 1 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCGACCTTGCGTC.......................................................................................... 23 2 1 1.00 1 1 0 0
........................................................CACCCGTGGAACCGACCTTGCGGT.......................................................................................... 24 2 1 1.00 1 1 0 0
..........................................................CCCGTAGAACCGACCTTG.............................................................................................. 18 0 1 1.00 1 1 0 0
..............................................................................................TAAGCTCGTGTCTGTGGGTCCGA..................................................... 23 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTATGGGTCCGTT.................................................... 24 2 1 1.00 1 1 0 0
.............................................................................................ACAAGCTCGTGTCTGTGGGTCCGTTTA.................................................. 27 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTGT.................................................. 26 3 1 1.00 1 1 0 0
........................................................CACCCGGAGAACCGACCTTGCGA........................................................................................... 23 2 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACAGACCTTGCG............................................................................................ 21 1 1 1.00 1 1 0 0
........................................................CACCCATAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 1 0 0
........................................................AACCCGTAGAACCGACCTTG.............................................................................................. 20 1 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACCTTTCG............................................................................................ 22 1 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACCTTGTTA........................................................................................... 23 3 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCGACCTTGCT............................................................................................ 21 1 1 1.00 1 1 0 0
...............................................................................................TAGCTCGTGTCTGTGGGTCCGTAT................................................... 24 2 1 1.00 1 1 0 0
........................................................CAGCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 0 1 0
........................................................CACTCGTAGAACCGCCCTTGCGT........................................................................................... 23 3 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGCGGGTCCGTA.................................................... 24 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTTCGTTT................................................... 25 2 1 1.00 1 1 0 0
........................................................CACCTGTAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACCTTGAAT........................................................................................... 23 3 2 1.00 2 2 0 0
........................................................CACGCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 1.00 1 0 1 0
........................................................CACCCTTAGAACCGACCTTGC............................................................................................. 21 1 1 1.00 1 0 1 0
........................................................CACCCGTAGAACCGACATTGCC............................................................................................ 22 2 1 1.00 1 1 0 0
........................................................CACCAGTAGAACCGACCTTGC............................................................................................. 21 1 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACTTTGC............................................................................................. 21 1 1 1.00 1 1 0 0
.............................................................................................ACAAGCTCGTGTCTGTGGGTCCAAT.................................................... 25 3 2 1.00 2 2 0 0
........................................................CACCCGTAGAACCGTCCTTGCGA........................................................................................... 23 2 1 1.00 1 1 0 0
................................................................................................AGCTCGTGTCTGTGGGTCCGTTG................................................... 23 2 1 1.00 1 1 0 0
..........................................................CCCGTAGAACCGACCTTGCGTTT......................................................................................... 23 3 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGAGTCTGTGGGTCCGTA.................................................... 24 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGC..................................................... 23 1 1 1.00 1 1 0 0
........................................................CCCCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 0 1 0
..............................................................................................CAAGCTCGGGTCTGTGGGTCCGA..................................................... 23 2 1 1.00 1 0 0 1
........................................................CACCCGTAGAACCGACCTTGCGAAC......................................................................................... 25 3 1 1.00 1 1 0 0
..............................................................................................CAAGTTCGTGTCTGTGGGTCCGT..................................................... 23 1 1 1.00 1 1 0 0
........................................................CACGCGTAGAACCGCCCTTGCG............................................................................................ 22 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTTA.................................................. 26 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTAA................................................... 25 3 1 1.00 1 1 0 0
........................................................CACCCGTAGGACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 1 0 0
.........................................................ACCCGTAGCACCGACCTTGC............................................................................................. 20 1 1 1.00 1 1 0 0
........................................................CACCGGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 1.00 1 0 1 0
........................................................CACCCGTAGAACCGACCTTGCGAGA......................................................................................... 25 2 1 1.00 1 0 1 0
........................................................CACCCTTAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 0 0 1
.........................................................ACACGTAGAACCGCCCTTGCGT........................................................................................... 22 3 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCTACCTTGCG............................................................................................ 21 1 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAAC................................................... 25 3 1 1.00 1 1 0 0
.........................................................AACCGTAGAACCGACCTTG.............................................................................................. 19 1 1 1.00 1 1 0 0
.........................................................GACCGTAGAACCGACCTTGCG............................................................................................ 21 2 1 1.00 1 0 1 0
............................................................CGTAGAACTGACCTTGCG............................................................................................ 18 1 1 1.00 1 0 1 0
.......................................................ACACCCGTAGCACCGACCTTGCG............................................................................................ 23 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGAGTCTGTGGGTCCCTT.................................................... 24 3 1 1.00 1 1 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAGC......................................................................................... 24 2 1 1.00 1 1 0 0
..............................................................................................AAAGCTCGTGTCTGTGGGTCCGT..................................................... 23 1 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAAT.................................................. 26 3 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTAC.................................................... 24 3 1 1.00 1 1 0 0
...............................................................................................AAGCTCGTGTCGGTGGGTCCGTAT................................................... 24 2 1 1.00 1 1 0 0
........................................................CACGCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 1.00 1 1 0 0
........................................................CACCCGCAGAACCGACCTTGCGA........................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................CCCGTAGAACCGACCTTGCGCA.......................................................................................... 22 2 1 1.00 1 1 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTTA................................................... 24 2 1 1.00 1 1 0 0
........................................................CACCCGTGGAACCGACCTTGCGAT.......................................................................................... 24 3 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGATA................................................... 25 3 1 1.00 1 1 0 0
........................................................CACCCGTAGAACCGACCTAGCGTA.......................................................................................... 24 3 1 1.00 1 0 0 1
........................................................CACCCGTAGAAACGACCTTGCGT........................................................................................... 23 2 1 1.00 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGACCGTA.................................................... 24 2 1 1.00 1 1 0 0

Anti-sense strand reads

GGACCCAAGGAACCCCTCCTCCCCCGGCCCCCGGGCCTGAGGACCCAGGACCGTGGGTGGGCATCTTGGCTGGAACGCCCCGGAAGCGGCGTGTGTTCGAGCACAGACACCCAGGCACAGCCCCCGAGTGGTAGCGCCGACCCTGGAGGGGCCGGGAGGGGGTGGGAGGG
**************************************.(((((((((((((..(((((((((..(((.(((((((........)))))....)).)))..)))))))))..))))).))))))))...***************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:29 PM