ID:

rno-mir-93

Coordinate:

chr12:19307543-19307629 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.3 -45.6 -45.3

Sense Strand Reads

GCCCTAGATATCTTAGAAGTCTTCCTTCTGTCCTCCCCTCTTGGACCTTTAGTCATGGGGGCTCCAAAGTGCTGTTCGTGCAGGTAGTGCATTGCCTGACCTACTGCTGAGCTAGCACTTCCCGAGCCCCCAGGACACAGCCTCTGACAGTGGCCCTAGCTGAGCACCCCAGGCTCCACTTGTCACG
*************************************************..(((.(((((((((..((((((((((((.((((.(((..((.....))..)))))))))))).)))))))...))))))))).)))....***********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
................................................................CAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 0 1 16283.00 16283 15849 234 200
................................................................CAAAGTGCTGTTCGTGCAGGTAA.................................................................................................... 23 1 1 3235.00 3235 3227 6 2
................................................................CAAAGTGCTGTTCGTGCAGGTAT.................................................................................................... 23 1 1 2740.00 2740 2709 23 8
................................................................CAAAGTGCTGTTCGTGCAGGTAGT................................................................................................... 24 0 1 2019.00 2019 1908 94 17
................................................................CAAAGTGCTGTTCGTGCAGGTAGA................................................................................................... 24 1 1 1648.00 1648 1592 46 10
................................................................CAAAGTGCTGTTCGTGCAGGTA..................................................................................................... 22 0 1 1325.00 1325 1297 13 15
.................................................................AAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 22 0 1 625.00 625 614 10 1
................................................................CAAAGTGCTGTTCGTGCAGGTAAA................................................................................................... 24 2 1 532.00 532 519 2 11
......................................................................................................ACTGCTGAGCTAGCACTTCCCGA.............................................................. 23 0 1 500.00 500 481 15 4
................................................................CAAAGTGCTGTTCGTGCAGGT...................................................................................................... 21 0 1 334.00 334 306 28 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 24 1 1 212.00 212 203 9 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAT................................................................................................... 24 1 1 201.00 201 200 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAA.................................................................................................. 25 2 1 176.00 176 172 4 0
.................................................................AAAGTGCTGTTCGTGCAGGTAA.................................................................................................... 22 1 1 117.00 117 116 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGT.............................................................. 23 1 1 113.00 113 110 3 0
................................................................CAACGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 103.00 103 96 0 7
................................................................CAAAGTGCTGTTCGTGCAGGTCG.................................................................................................... 23 1 1 102.00 102 92 0 10
................................................................CAAAGTGCTGTTCGTGCAGGTATT................................................................................................... 24 1 1 98.00 98 92 5 1
.................................................................AAAGTGCTGTTCGTGCAGGTAT.................................................................................................... 22 1 1 92.00 92 92 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGC................................................................................................... 23 1 1 84.00 84 84 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGT................................................................................................... 23 0 1 81.00 81 77 4 0
................................................................CAAAGTGCTGTTCGTGCAGGTTT.................................................................................................... 23 2 1 78.00 78 77 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAT............................................................. 24 1 1 77.00 77 70 7 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAA............................................................. 24 1 1 69.00 69 69 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAAA.................................................................................................. 25 3 2 66.50 133 133 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 66.00 66 62 1 3
..................................................................AAGTGCTGTTCGTGCAGGTAG.................................................................................................... 21 0 1 65.00 65 65 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGA................................................................................................... 23 1 1 59.00 59 59 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTT..................................................................................................... 22 1 1 58.00 58 56 2 0
.................................................................AAAGTGCTGTTCGTGCAGGTA..................................................................................................... 21 0 1 57.00 57 57 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCG............................................................... 22 0 1 55.00 55 55 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAT.................................................................................................. 25 2 1 54.00 54 53 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTATA................................................................................................... 24 2 1 53.00 53 53 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTAA................................................................................................. 26 2 1 53.00 53 52 0 1
................................................................CAAAGTGCTGTTCGTGCAGGTAGTA.................................................................................................. 25 1 1 52.00 52 51 1 0
................................................................CAAAGTGCTGTTCGTGCAGG....................................................................................................... 20 0 1 50.00 50 44 6 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAAA................................................................................................. 26 3 1 45.00 45 38 7 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTT.................................................................................................. 25 1 1 43.00 43 38 5 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAAA............................................................ 25 2 1 42.00 42 41 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAG................................................................................................... 24 2 1 42.00 42 42 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTT............................................................. 24 2 1 40.00 40 40 0 0
....................................................................GTGCTGTTCGTGCAGGTAG.................................................................................................... 19 0 1 37.00 37 33 3 1
................................................................CAAAGTGCTGTTCGTGCAGGTTA.................................................................................................... 23 2 1 37.00 37 37 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTGG.................................................................................................... 23 1 1 36.00 36 30 0 6
................................................................CAAAGTGCTGTTCGTGCAGGTAGTAT................................................................................................. 26 2 1 35.00 35 35 0 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAT.................................................................................................... 24 2 1 35.00 35 35 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTATAA.................................................................................................. 25 3 1 35.00 35 35 0 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAA.................................................................................................... 24 2 1 29.00 29 29 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTAA............................................................ 25 3 1 29.00 29 29 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAA................................................................................................... 23 2 1 28.00 28 28 0 0
................................................................CAAAGCGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 27.00 27 25 1 1
...............................................................CCAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 24 0 1 27.00 27 27 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTA............................................................. 24 2 1 26.00 26 26 0 0
................................................................CAACGTGCTGTTCGTGCAGGTAA.................................................................................................... 23 2 1 26.00 26 26 0 0
................................................................CAAAGTGCTGTTCATGCAGGTAG.................................................................................................... 23 1 1 26.00 26 26 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTGA.................................................................................................... 23 2 1 25.00 25 25 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAAT................................................................................................. 26 3 1 25.00 25 20 5 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTA..................................................................................................... 23 1 1 25.00 25 24 1 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAGT................................................................................................... 25 1 1 25.00 25 22 3 0
................................................................CAAAGTGCTGTTCGTGCAGGTTG.................................................................................................... 23 1 1 24.00 24 23 0 1
...............................................................ACAAAGTGCTGTTCGTGCAGGTAGA................................................................................................... 25 2 1 24.00 24 24 0 0
................................................................CAAAGTGCTGTTCGTGCAGGCAG.................................................................................................... 23 1 1 24.00 24 24 0 0
................................................................CAAAGTGCTGTTCGCGCAGGTAG.................................................................................................... 23 1 1 23.00 23 23 0 0
...................................................................AGTGCTGTTCGTGCAGGTAG.................................................................................................... 20 0 1 23.00 23 21 2 0
................................................................CAAAGTGCTGCTCGTGCAGGTAG.................................................................................................... 23 1 1 23.00 23 20 2 1
................................................................CAAAGTGCTGTTCGTGCAGGTAGG................................................................................................... 24 1 1 21.00 21 21 0 0
................................................................CAAAGTGCTGTTCCTGCAGGTAG.................................................................................................... 23 1 1 20.00 20 18 1 1
................................................................CAACGTGCTGTTCGTGCAGGTAGT................................................................................................... 24 1 1 20.00 20 19 0 1
................................................................CAAAGTGCTGTTCGTGCAGGTTAA................................................................................................... 24 3 1 20.00 20 19 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTAT............................................................ 25 3 1 20.00 20 20 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAAT............................................................ 25 2 1 20.00 20 20 0 0
................................................................CAAAGAGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 19.00 19 18 0 1
...............................................................CCAAAGTGCTGTTCGTGCAGGTAT.................................................................................................... 24 1 1 19.00 19 19 0 0
................................................................CACCGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 2 1 18.00 18 17 0 1
................................................................CAAAGTGCTGTTCGTGCAGGTAC.................................................................................................... 23 1 1 18.00 18 18 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAC................................................................................................... 23 2 1 18.00 18 18 0 0
................................................................CAACGTGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 17.00 17 17 0 0
................................................................CAAAGTGCTGTTCGTGCAG........................................................................................................ 19 0 1 17.00 17 11 6 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAAT.................................................................................................. 25 3 1 16.00 16 16 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTTAT................................................................................................... 24 2 1 16.00 16 16 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGAC.................................................................................................. 24 2 1 16.00 16 15 1 0
.....................................................................................................AACTGCTGAGCTAGCACTTCCCGT.............................................................. 24 2 1 15.00 15 3 12 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAGA.................................................................................................. 25 3 2 14.50 29 29 0 0
..................................................................AAGTGCTGTTCGTGCAGGTAGT................................................................................................... 22 0 1 14.00 14 14 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTATTT.................................................................................................. 25 2 1 14.00 14 14 0 0
................................................................CAGCGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 2 1 14.00 14 13 0 1
..................................................................AAGTGCTGTTCGTGCAGGTAT.................................................................................................... 21 1 1 14.00 14 14 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTAA.................................................................................................... 23 2 1 13.00 13 12 0 1
.......................................................................................................CTGCTGAGCTAGCACTTCCCGA.............................................................. 22 0 1 13.00 13 13 0 0
................................................................CAAAGTGCTGTTCGTGCAGGAA..................................................................................................... 22 1 1 13.00 13 13 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTGT.................................................................................................... 23 2 1 13.00 13 13 0 0
................................................................CAAAGTGCTGTTCGAGCAGGTAG.................................................................................................... 23 1 1 13.00 13 13 0 0
................................................................CAAAGTGCTGTTCTTGCAGGTAG.................................................................................................... 23 1 1 13.00 13 13 0 0
................................................................CAACGTGCTGTTCGTGCAGGTA..................................................................................................... 22 1 1 13.00 13 13 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTATTA.................................................................................................. 25 2 1 12.00 12 12 0 0
................................................................CAAAGTCCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 12.00 12 11 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTTT............................................................ 25 3 1 12.00 12 12 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTAGT................................................................................................... 24 1 1 12.00 12 11 1 0
................................................................CCAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 12.00 12 9 3 0
..................................................................AAGTGCTGTTCGTGCAGGTAGA................................................................................................... 22 1 1 12.00 12 12 0 0
................................................................CAAAGTGCTGATCGTGCAGGTAG.................................................................................................... 23 1 1 11.00 11 11 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTATAT.................................................................................................. 25 3 1 11.00 11 11 0 0
................................................................CATCGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 2 1 11.00 11 11 0 0
................................................................CAAAGTGCTGTTCGTGAAGGTAG.................................................................................................... 23 1 1 11.00 11 8 1 2
.....................................................................TGCTGTTCGTGCAGGTAG.................................................................................................... 18 0 1 11.00 11 10 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAGA............................................................ 25 1 1 11.00 11 11 0 0
..................................................................AAGTGCTGTTCGTGCAGGTAA.................................................................................................... 21 1 1 11.00 11 11 0 0
................................................................CAAAGTGCTGTCCGTGCAGGTAG.................................................................................................... 23 1 1 11.00 11 10 0 1
................................................................CAAAGTGATGTTCGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 9 0 1
................................................................CAAAGTGCTGTTTGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 10 0 0
................................................................TAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 10 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 10.00 10 10 0 0
...................................................................AGTGCTGTTCGTGCAGGTAGTCG................................................................................................. 23 2 1 10.00 10 0 0 10
................................................................CAAAGTGCCGTTCGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 9 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGACG................................................................................................. 26 3 1 10.00 10 0 0 10
...............................................................CCAAAGTGCTGTTCGTGCAGGTA..................................................................................................... 23 0 1 10.00 10 10 0 0
................................................................CAAGGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 9 1 0
....................................................................GTGCTGTTCGTGCAGGTAA.................................................................................................... 19 1 1 10.00 10 10 0 0
................................................................TAACGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 2 1 10.00 10 10 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTTT................................................................................................. 26 2 1 10.00 10 9 1 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGATT............................................................ 25 2 1 10.00 10 7 3 0
................................................................CAAACTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 10.00 10 10 0 0
.................................................................AAAGTGCTGTTCGTGCAGGT...................................................................................................... 20 0 1 10.00 10 9 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTG..................................................................................................... 22 1 1 9.00 9 9 0 0
................................................................CAAAGTGCTGTTCCTGCAGGTAT.................................................................................................... 23 2 1 9.00 9 9 0 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAAA................................................................................................... 25 3 1 9.00 9 9 0 0
................................................................CAAAGTGCTGTTCGTCCAGGTAG.................................................................................................... 23 1 1 9.00 9 7 2 0
......................................................................................................ACTGCTGAGCTAGCCCTTCCCGA.............................................................. 23 1 1 9.00 9 9 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTC..................................................................................................... 22 1 1 9.00 9 9 0 0
................................................................AAACGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 2 1 9.00 9 7 0 2
................................................................CAAAGTGCTGTTCGTGCAGGTAAAG.................................................................................................. 25 2 1 9.00 9 9 0 0
................................................................CAAAGTGCTGTTCGTGCAGGGAG.................................................................................................... 23 1 1 9.00 9 8 0 1
................................................................CAAAGTGCTGTTCGTGCAGGTCGT................................................................................................... 24 1 1 9.00 9 9 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTAGA................................................................................................... 24 2 1 9.00 9 9 0 0
................................................................CAAAGCGCTGTTCGTGCAGGTAA.................................................................................................... 23 2 1 8.00 8 8 0 0
................................................................CAACGTGCTGTTCGTGCAGGTAAA................................................................................................... 24 3 1 8.00 8 8 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTTA............................................................ 25 3 1 8.00 8 8 0 0
................................................................CAAAGTGCTGTTCGTGCAAGTAG.................................................................................................... 23 1 1 8.00 8 8 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCC................................................................ 21 0 1 8.00 8 7 1 0
................................................................CAAAGTGCTGTTCGTGTAGGTAG.................................................................................................... 23 1 1 8.00 8 8 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAAC.................................................................................................. 24 3 1 8.00 8 8 0 0
................................................................CGAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 8.00 8 7 1 0
................................................................CAAAGTGCTGTTCGTGAAGGTCG.................................................................................................... 23 2 1 7.00 7 7 0 0
................................................................CAACGTGCTGTTCGTGCAGGTAGA................................................................................................... 24 2 1 7.00 7 7 0 0
................................................................CAGAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 7.00 7 5 2 0
................................................................CAAAGTGCTGTTCGGGCAGGTAG.................................................................................................... 23 1 1 7.00 7 7 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAACG.................................................................................................. 25 2 1 7.00 7 0 0 7
................................................................CAAAGTGCTGTTCGTGCAGGAAGA................................................................................................... 24 2 1 7.00 7 7 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAG.................................................................................................. 25 1 1 7.00 7 7 0 0
................................................................CAATGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 7.00 7 7 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGAA.................................................................................................. 24 2 1 7.00 7 7 0 0
................................................................CAAAGTGCTGTACGTGCAGGTAG.................................................................................................... 23 1 1 7.00 7 7 0 0
................................................................CAAAGGGCTGTTCGTGCAGGTA..................................................................................................... 22 1 1 7.00 7 7 0 0
................................................................CAAAGTGCTGTTCGTGCAGGA...................................................................................................... 21 1 1 7.00 7 7 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGGA............................................................. 24 2 1 7.00 7 7 0 0
................................................................CAAAGTGCTGTTCGCGCAGGTAA.................................................................................................... 23 2 1 7.00 7 7 0 0
....................................................................GTGCTGTTCGTGCAGGTAGT................................................................................................... 20 0 1 7.00 7 5 2 0
................................................................CAAAGTGCTGTTCGTGCCGGTAG.................................................................................................... 23 1 1 7.00 7 7 0 0
................................................................CAAAGTGCTGGTCGTGCAGGTAG.................................................................................................... 23 1 1 7.00 7 6 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTCA.................................................................................................... 23 2 2 6.50 13 13 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAAA.................................................................................................. 24 3 2 6.50 13 11 0 2
...............................................................CCAAAGTGCTGTTCGTGCAGGTTT.................................................................................................... 24 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGCAA.................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTTTT................................................................................................... 24 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTCGA................................................................................................... 24 2 1 6.00 6 5 0 1
.................................................................AAAGTGCTGTTCGTGCAGGTAC.................................................................................................... 22 1 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCATGCAGGTAT.................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAGT.................................................................................................. 25 3 1 6.00 6 6 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAT................................................................................................... 23 1 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAGA................................................................................................. 26 2 1 6.00 6 6 0 0
................................................................CAAAGCGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 6.00 6 6 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAGT............................................................ 25 1 1 6.00 6 6 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTATC................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGCGCAGGTAT.................................................................................................... 23 2 1 6.00 6 5 1 0
................................................................CAAAGTGCTGTTCGTGCACGTAG.................................................................................................... 23 1 1 6.00 6 5 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTTGA................................................................................................... 24 2 1 6.00 6 6 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGATA............................................................ 25 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTCCGTGCAGGTAT.................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAC................................................................................................... 24 2 1 6.00 6 6 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGATCG........................................................... 26 2 1 6.00 6 0 0 6
................................................................CAAAGTGCTGTTCGTGCAGGAAG.................................................................................................... 23 1 1 6.00 6 6 0 0
.....................................................................................................AACTGCTGAGCTAGCACTTCCCGAA............................................................. 25 2 1 6.00 6 4 2 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCAA.............................................................. 23 1 1 6.00 6 5 0 1
....................................................................GTGCTGTTCGTGCAGGTAGCAAA................................................................................................ 23 3 2 6.00 12 12 0 0
................................................................CAAAGTGCTATTCGTGCAGGTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTACGTGCAGGTAT.................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTTA................................................................................................. 26 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGCTCGTGCAGGTAA.................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTTCAGGTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
..................................................................AAGTGCTGTTCGTGCAGGT...................................................................................................... 19 0 1 5.00 5 4 1 0
..............................................................AACAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 25 2 1 5.00 5 5 0 0
......................................................................................................ACTGCTGAGCTAGAACTTCCCGA.............................................................. 23 1 1 5.00 5 5 0 0
................................................................CAAAGTGCTTTTCGTGCAGGTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAG................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGGT.................................................................................................. 25 2 1 5.00 5 5 0 0
................................................................CAACGTGCTGTTCGTGAAGGTAG.................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGCGCAGGTAGT................................................................................................... 24 1 1 5.00 5 5 0 0
................................................................AAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTACAGGTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCC................................................................. 20 0 1 5.00 5 3 2 0
...............................................................GCAAAGTGCTGTTCGTGCAGGTA..................................................................................................... 23 1 1 5.00 5 5 0 0
.....................................................................TGCTGTTCGTGCAGGTAGT................................................................................................... 19 0 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAAG................................................................................................. 26 3 1 5.00 5 5 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTATT................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................TAAAGTGCTGTTCGTGCAGGTAA.................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTAAA................................................................................................ 27 2 1 5.00 5 4 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGAAAA................................................................................................ 27 3 1 5.00 5 5 0 0
................................................................CAAAGAGCTGTTCGTGCAGGTAA.................................................................................................... 23 2 1 5.00 5 5 0 0
..................................................................AAGTGCTGTTCGTGCAGGTAGCA.................................................................................................. 23 2 1 5.00 5 5 0 0
................................................................CAGCGTGCTGTTCGTGCAGGTAA.................................................................................................... 23 3 1 5.00 5 5 0 0
................................................................TAAAGTGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGCTAG.................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGC................................................................................................... 24 1 1 5.00 5 4 1 0
................................................................CACAGTGCTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 5.00 5 4 1 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTT..................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTATTTT................................................................................................. 26 3 1 5.00 5 5 0 0
................................................................CAACGTGCAGTTCGTGCAGGTAG.................................................................................................... 23 2 1 5.00 5 4 0 1
................................................................CAAAGTGCTGTTCGTGCAGGTAGTTTT................................................................................................ 27 3 1 5.00 5 4 1 0
................................................................CACCGTGCTGTTCGTGCAGGTAT.................................................................................................... 23 3 2 4.50 9 9 0 0
....................................................................GTGCTGTTCGTGCAGGTAGTTAT................................................................................................ 23 3 2 4.50 9 9 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTCT.................................................................................................... 23 2 4 4.25 17 17 0 0
................................................................CAAAGTGCTCTTCGTGCAGGTAG.................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTGC................................................................................................. 26 0 1 4.00 4 4 0 0
................................................................CAAAGGGCTGTTCGTGCAGGT...................................................................................................... 21 1 1 4.00 4 3 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGGA.................................................................................................. 25 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTGAA................................................................................................... 24 3 1 4.00 4 4 0 0
................................................................CAAAGCGCTGTTCGTGCAGGTAGA................................................................................................... 24 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGTTAG.................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAAAGT................................................................................................. 26 3 1 4.00 4 4 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGTTC................................................................................................. 25 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTCGAA.................................................................................................. 25 3 1 4.00 4 4 0 0
.................................................................AAAGTGCTGTTAGTGCAGGTAG.................................................................................................... 22 1 1 4.00 4 4 0 0
......................................................................................................ACTGCTGAGCTCGCACTTCCCGA.............................................................. 23 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTGGA................................................................................................... 24 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGGAGGTAG.................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAAGTAA.................................................................................................... 23 2 1 4.00 4 4 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGTAA................................................................................................. 25 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGAAT.................................................................................................... 23 2 1 4.00 4 3 0 1
.................................................................AAAGTGCTGTTCGTGCAGGTAGAG.................................................................................................. 24 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGAGCAGGTAGT................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGATCGTGCAGGTAA.................................................................................................... 23 2 1 4.00 4 4 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAAAAC................................................................................................. 25 3 1 4.00 4 4 0 0
...............................................................TCAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGGAGGTCG.................................................................................................... 23 2 1 4.00 4 4 0 0
................................................................CAAAGAGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 4.00 4 4 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCAAA............................................................. 24 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCCTGCAGGTAGT................................................................................................... 24 1 1 4.00 4 3 0 1
................................................................CAAAGTGCTGCTCGTGCAGGTAT.................................................................................................... 23 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTAAT................................................................................................ 27 3 1 4.00 4 4 0 0
.............................................................AAACAAAGTGCTGTTCGTGCAGGTAG.................................................................................................... 26 3 1 4.00 4 4 0 0
................................................................CACCGTGCTGTTCGTGCAGGTAA.................................................................................................... 23 3 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTTGTGCAGGTAGT................................................................................................... 24 1 1 4.00 4 4 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGTA.................................................................................................. 24 1 1 4.00 4 4 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCCA.............................................................. 23 1 1 4.00 4 4 0 0
...............................................................CCAAAGTGCTGTTCGTGCAGGTAA.................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................CAAAGTGCAGTTCGTGCAGGTAG.................................................................................................... 23 1 1 4.00 4 4 0 0
..................................................................AAGTGCTGTTCGTGCAGGTA..................................................................................................... 20 0 1 4.00 4 4 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGTGA............................................................ 25 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAATT.................................................................................................. 25 2 1 4.00 4 4 0 0
................................................................CAAAGTGCTGTTCGAGCAGGTAAA................................................................................................... 24 3 1 4.00 4 4 0 0
.......................................................................................................CTGCTGAGCTAGCACTTCCCGAT............................................................. 23 1 1 4.00 4 4 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAAGT........................................................... 26 3 1 4.00 4 4 0 0
.................................................................AAAGAGCTGTTCGTGCAGGTAG.................................................................................................... 22 1 1 4.00 4 4 0 0
...............................................................ACAAAGTGCTGTTCGTGCAGGT...................................................................................................... 22 1 1 4.00 4 3 1 0
...................................................................AGTGCTGTTCGTGCAGGTAGCAA................................................................................................. 23 3 3 3.33 10 10 0 0
................................................................CAAAGTGCTGTTCGTGCAGGAAA.................................................................................................... 23 2 3 3.33 10 10 0 0
................................................................CAAAGTGCTGTTCGTGCAA........................................................................................................ 19 1 1 3.00 3 2 1 0
..................................................................AAGTGCTGTTCGTGCAGGTAGC................................................................................................... 22 1 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCGGGTAG.................................................................................................... 23 1 1 3.00 3 2 0 1
................................................................AAACGTGCTGTTCGTGCAGGTAT.................................................................................................... 23 3 1 3.00 3 3 0 0
...............................................................ACACAGTGCTGTTCGTGCAGGTAG.................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................CAAAGTGTTGTTCGTGCAGGTAG.................................................................................................... 23 1 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGGCAGA................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCATGCAGGTAA.................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................CAAAGTGCAGTTCGTGCAGGTAA.................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................CAAATTGCTGTTCGTGCAGGTAT.................................................................................................... 23 2 1 3.00 3 3 0 0
..............................................................CTCAAAGTGCTGTTCGTGCAGGTAGA................................................................................................... 26 3 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGTTAA.................................................................................................... 23 2 1 3.00 3 3 0 0
.....................................................................................................TACTGCTGAGCTAGCACTTCCCGT.............................................................. 24 1 1 3.00 3 3 0 0
..............................................................AGCAAAGTGCTGTTCGTGCAGGT...................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGGAT..................................................................................................... 22 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTTGT................................................................................................... 24 1 1 3.00 3 3 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCT............................................................... 22 1 1 3.00 3 1 2 0
.....................................................................................................AACTGCTGAGCTAGCACTTCCCGA.............................................................. 24 1 1 3.00 3 2 1 0
................................................................CAAAGTGCTGTTCGTGCAGGTGGT................................................................................................... 24 1 1 3.00 3 3 0 0
...............................................................ACAAAGTGCTGTTCGTGCAGGTAAT................................................................................................... 25 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGTAGGTAA.................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................CAAAGAGCTGTTCGTGCAGGTAGT................................................................................................... 24 1 1 3.00 3 3 0 0
......................................................................................................CCTGCTGAGCTAGCACTTCCCGA.............................................................. 23 1 1 3.00 3 3 0 0
......................................................................................................ACTGCTGAGCTAGCACTTCCCGAG............................................................. 24 0 1 3.00 3 3 0 0
................................................................CAAAGAGCTGTTCGTGCAGGTAGA................................................................................................... 24 2 1 3.00 3 2 1 0
......................................................................GCTGTTCGTGCAGGTAGT................................................................................................... 18 0 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGAAGGTAAT................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................CACCGTGCTGTTCGTGCAGGTAGC................................................................................................... 24 3 1 3.00 3 2 0 1
.....................................................................................................TACTGCTGAGCTAGCACTTCCCGA.............................................................. 24 0 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGGTAGTAG................................................................................................. 26 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTCGTGCAGGGAGA................................................................................................... 24 2 1 3.00 3 3 0 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGTAT................................................................................................. 25 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGATCGTGCAGGTAT.................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................CAAAGTGCTGTTAGTGCAGGTAG.................................................................................................... 23 1 1 3.00 3 2 1 0
.................................................................AAAGTGCTGTTCGTGCAGGTAGAAA................................................................................................. 25 3 1 3.00 3 3 0 0

Anti-sense strand reads

CGGGATCTATAGAATCTTCAGAAGGAAGACAGGAGGGGAGAACCTGGAAATCAGTACCCCCGAGGTTTCACGACAAGCACGTCCATCACGTAACGGACTGGATGACGACTCGATCGTGAAGGGCTCGGGGGTCCTGTGTCGGAGACTGTCACCGGGATCGACTCGTGGGGTCCGAGGTGAACAGTGC
***********************************************..(((.(((((((((..((((((((((((.((((.(((..((.....))..)))))))))))).)))))))...))))))))).)))....*************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:34 PM