ID:

rno-mir-92b

 Coordinate:

chr2:188541034-188541116 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-61.9 -61.7

Sense Strand Reads

CCCTGGGCTCCAGCGACCCAGGAGGTAGGGAGCGGGATTCCAGAGCCCCGGGTGGGCAGGAGGGACGGGACGCGGTGCAGTGTTGTTCTTTCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCGGCCCCCCCGGCGCCCCCTCACTCAGAGTGGGGCAGCCCCAGCCACCGGGC
***********************************.........((.(((((.((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).)))))).)))..........))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.....................................................................................................TATTGCACTCGTCCCGGCCTCAA........................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................ATATTGCACTTGTCCCGGCCT.............................................................. 21 1 3 2.00 6 0 6 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCCT........................................................... 23 1 1 2.00 2 2 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCC............................................................ 22 0 1 2.00 2 2 0 0
.....................................................................................................TATTGCCCTCGTCCCGGCCTCAT........................................................... 23 3 1 1.00 1 1 0 0
.......................................................................................................TTGCACTCGTCCCGGCCTCCAA.......................................................... 22 2 1 1.00 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCCTTA......................................................... 25 3 1 1.00 1 1 0 0
......................................................................................................ATTGCACTCGTCCCGGCCTCCT........................................................... 22 1 1 1.00 1 0 1 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCTAT.......................................................... 24 3 1 1.00 1 1 0 0
......................................................................................................ATTGCACTCGTCCCGGCCTCCTAT......................................................... 24 3 1 1.00 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCCTAT......................................................... 25 3 1 1.00 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCAAG.......................................................... 24 2 1 1.00 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTCATA.......................................................... 24 3 1 1.00 1 1 0 0
..................................................................................................GTATATTGCACTTGTCCCGGCCT.............................................................. 23 3 3 1.00 3 2 0 1
....................................................................................................ATATTGCACTTGTCCCGGC................................................................ 19 1 3 0.67 2 0 2 0
......................................................................................................ATTGCACTCGTCCCGGCCTCCTTT......................................................... 24 3 2 0.50 1 1 0 0
.....................................................................................................AATTGCACTAGTCCCGGCCTGCG........................................................... 23 3 2 0.50 1 0 0 1
.....................................................................................................TATTGCACTCGTCCCGGCCTCTT........................................................... 23 2 2 0.50 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTTAA........................................................... 23 3 2 0.50 1 1 0 0
.....................................................................................................TATTGCACTCGTCCCGGCCTATA........................................................... 23 3 3 0.33 1 1 0 0
....................................................................................................ATATTGCACTTGTCCCGGCCTCT............................................................ 23 2 3 0.33 1 1 0 0
....................................................................................................ATATTGCACTTGTCCCGGCC............................................................... 20 1 3 0.33 1 0 1 0
....................................................................................................ATATTGCACTTGTACCGGCCT.............................................................. 21 2 3 0.33 1 1 0 0
.....................................................................................................TATTGCACTTGTCCCGGCCTAC............................................................ 22 2 3 0.33 1 1 0 0
....................................................................................................ATATTGCACTTGTCCCGGCCTGC............................................................ 23 2 3 0.33 1 1 0 0
....................................................................................................ATATTCCACTTGTCCCGGCCT.............................................................. 21 2 4 0.25 1 0 1 0
....................................................................................................ATATTGCACTTGTCCCGG................................................................. 18 1 5 0.20 1 0 1 0

Anti-sense strand reads

GGGACCCGAGGTCGCTGGGTCCTCCATCCCTCGCCCTAAGGTCTCGGGGCCCACCCGTCCTCCCTGCCCTGCGCCACGTCACAACAAGAAAGGGGACGGTTATAACGTGAGCAGGGCCGGAGGCCGGGGGAGCCGGGGGGGCCGCGGGGGAGTGAGTCTCACCCCGTCGGGGTCGGTGGCCCG
***********************************.........((.(((((.((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).)))))).)))..........))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
.....................................................................................................................GGGAGGCCGAGGGAGCCGGGGC............................................ 22 3 20 0.05 1 1

Generated: 04/30/2015 at 05:42 PM