ID:

rno-mir-872

Coordinate:

chr5:113657727-113657807 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.1 -35.6 -35.1

Sense Strand Reads

GCTGTGATCATCCTAATTACTGCAACAACACAGGGGGTTGTGTAGACGGTAACTTGTTAGAAGGTTACTTGTTAGTTCAGGACCTCATTACTTTCTGCCTGAACTATTGCAGTAGCCTCCTAACTGGTTATCCCACCTCCATTCTTGCCCCTTCTAAGTCTTTTTCCAGTATAATGCTGTA
*********************************************..(((((((.(((((.((((((((.(((((((((((................)))))))))..)))))))))).))))).)))))))....*********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
............................................................AAGGTTACTTGTTAGTTCAGG.................................................................................................... 21 0 1 925.00 925 680 245 0
............................................................AAGGTTACTTGTTAGTTCAGGA................................................................................................... 22 0 1 800.00 800 737 58 5
...................................................................................................TGAACTATTGCAGTAGCCTCCTAT.......................................................... 24 1 1 236.00 236 234 0 2
...................................................................................................TGAACTATTGCAGTAGCCTCCT............................................................ 22 0 1 230.00 230 228 2 0
............................................................AAGGTTACTTGTTAGTTCAGGAA.................................................................................................. 23 1 1 207.00 207 192 15 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTT........................................................... 23 1 1 138.00 138 135 3 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAA.......................................................... 24 0 1 132.00 132 129 0 3
............................................................AAGGTTACTTGTTAGTTCAG..................................................................................................... 20 0 1 131.00 131 100 31 0
............................................................AAGGTTACTTGTTAGTTCAGGAT.................................................................................................. 23 1 1 121.00 121 121 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTA........................................................... 23 0 1 120.00 120 119 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTT.......................................................... 24 2 2 102.00 204 200 4 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAA......................................................... 25 1 1 66.00 66 66 0 0
............................................................AAGGTTACTTGTTAGTTCAGGT................................................................................................... 22 1 1 56.00 56 36 20 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTA.......................................................... 24 1 1 52.00 52 52 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAA......................................................... 25 2 1 44.00 44 44 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGA................................................................................................... 23 1 1 44.00 44 41 3 0
............................................................AAGGTTACTTGTTAGTTCAGGAAA................................................................................................. 24 2 1 38.00 38 28 10 0
...................................................................................................TGAACTATTGCAGTAGCCTCC............................................................. 21 0 1 38.00 38 38 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAT......................................................... 25 2 1 35.00 35 35 0 0
............................................................AAGGTTACTTGTTAGTTCA...................................................................................................... 19 0 1 32.00 32 23 9 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATT......................................................... 25 2 1 32.00 32 32 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAT................................................................................................. 24 2 1 30.00 30 28 2 0
............................................................AAGGTTACTTGTTAGTTCAGGAG.................................................................................................. 23 1 1 25.00 25 25 0 0
............................................................AAGGTTACTTGTTAGTTCAGGATT................................................................................................. 24 2 1 19.00 19 18 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTTT......................................................... 25 3 4 17.75 71 71 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAT......................................................... 25 1 1 17.00 17 17 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGG.................................................................................................... 22 1 1 15.00 15 12 3 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATA......................................................... 25 2 1 13.00 13 13 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAAA........................................................ 26 3 1 12.00 12 12 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTT........................................................... 22 1 1 12.00 12 12 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTGT.......................................................... 24 2 1 12.00 12 12 0 0
.............................................................AGGTTACTTGTTAGTTCAGGA................................................................................................... 21 0 1 11.00 11 9 2 0
............................................................AAGGTTACTTGTTAGTTCAGGTT.................................................................................................. 23 2 1 10.00 10 7 3 0
............................................................AAGGTTACTTGTTCGTTCAGGA................................................................................................... 22 1 1 10.00 10 10 0 0
.............................................................AGGTTACTTGTTAGTTCAGG.................................................................................................... 20 0 1 10.00 10 7 3 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAAA........................................................ 26 2 1 10.00 10 10 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATAT........................................................ 26 2 1 9.00 9 9 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTTAT........................................................ 26 3 2 8.50 17 17 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATTT........................................................ 26 2 1 7.00 7 7 0 0
............................................................AAGGTTACTTGTTCGTTCAGG.................................................................................................... 21 1 1 7.00 7 7 0 0
............................................................AAGGTTACTTGTTAGTTCCGGA................................................................................................... 22 1 1 7.00 7 7 0 0
............................................................AAGGATACTTGTTAGTTCAGG.................................................................................................... 21 1 1 7.00 7 7 0 0
............................................................AAGGTTACTTGTTAGTTCAGGG................................................................................................... 22 1 1 7.00 7 6 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAAT........................................................ 26 2 1 7.00 7 7 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTA........................................................... 22 0 1 6.00 6 6 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATAA........................................................ 26 3 1 6.00 6 6 0 0
............................................................AAGGTTACTTGTTCGTTCAGGAA.................................................................................................. 23 2 1 6.00 6 6 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTTA.......................................................... 23 1 1 6.00 6 6 0 0
............................................................AAGGTTACTTGTTAGTTCAGT.................................................................................................... 21 1 1 6.00 6 5 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCA............................................................ 22 1 1 6.00 6 6 0 0
...................................................................................................TGAACTATTGCAGTAGCCTC.............................................................. 20 0 1 6.00 6 6 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAG.......................................................... 24 1 1 6.00 6 6 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTTT.......................................................... 23 2 2 5.50 11 11 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTTA......................................................... 25 3 4 5.25 21 20 0 1
............................................................AAGGTTACTTGTTAGTTCAGGAGA................................................................................................. 24 2 1 5.00 5 5 0 0
............................................................AAGGTTACTTGTTAGTTCAGGC................................................................................................... 22 1 1 5.00 5 5 0 0
...................................................................................................TGACCTATTGCAGTAGCCTCCT............................................................ 22 1 1 5.00 5 5 0 0
..................................................................................................ATGAACTATTGCAGTAGCCTCCT............................................................ 23 1 1 5.00 5 5 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAG................................................................................................. 24 2 1 5.00 5 5 0 0
.............................................................AGGTTACTTGTTAGTTCAG..................................................................................................... 19 0 1 5.00 5 4 1 0
............................................................AAGGTTACTTGTTAGTTCCGG.................................................................................................... 21 1 1 5.00 5 5 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATTTT....................................................... 27 3 1 5.00 5 5 0 0
............................................................AAGGTTACTTGTTAGTTCAGGACC................................................................................................. 24 0 1 5.00 5 5 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAGT................................................................................................. 24 2 1 5.00 5 5 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAGA......................................................... 25 2 1 5.00 5 5 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCT............................................................ 21 0 1 5.00 5 5 0 0
............................................................AAGGTTACTTGTTTGTTCAGGA................................................................................................... 22 1 1 5.00 5 4 0 1
...................................................................................................TGAACTATTGCAGAAGCCTCCTAT.......................................................... 24 2 1 4.00 4 4 0 0
.......................................................................................................CTATTGCAGTAGCCTCCT............................................................ 18 0 1 4.00 4 0 4 0
............................................................AAGGTTACTTGTTAATTCAGG.................................................................................................... 21 1 1 4.00 4 1 3 0
.................................................................................................AATGAACTATTGCAGTAGCCTCCTAT.......................................................... 26 3 1 4.00 4 4 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAG......................................................... 25 1 1 4.00 4 4 0 0
............................................................AAGGTTACTTGTTAGTTC....................................................................................................... 18 0 1 4.00 4 2 2 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAAT........................................................ 26 1 1 4.00 4 4 0 0
............................................................AAGGTTACTTGTTAGTTCAGGACCTCA.............................................................................................. 27 0 1 4.00 4 4 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTTTT........................................................ 26 3 3 3.33 10 10 0 0
........................................................................................................TATTGCAGTAGCCTCCT............................................................ 17 0 1 3.00 3 0 3 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAAT.......................................................... 24 2 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCTT............................................................ 22 1 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAAA.......................................................... 24 1 1 3.00 3 3 0 0
............................................................AAGGTTACTTGTTAGTTCAGGACCT................................................................................................ 25 0 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCA............................................................. 21 1 1 3.00 3 3 0 0
................................................................TTACTTGTTAGTTCAGG.................................................................................................... 17 0 1 3.00 3 0 3 0
............................................................AAGGTTACTTGTTAGTTCAGGTA.................................................................................................. 23 2 1 3.00 3 2 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAGA.......................................................... 24 2 1 3.00 3 3 0 0
..................................................................................................ATGAACTATTGCAGTAGCCTCCTAT.......................................................... 25 2 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAC.......................................................... 24 1 1 3.00 3 3 0 0
............................................................AAGGTTACTTGTTACTTCAGGA................................................................................................... 22 1 1 3.00 3 1 2 0
............................................................AAAGTTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 3.00 3 1 2 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAA........................................................... 23 1 1 3.00 3 3 0 0
................................................................TTACTTGTTAGTTCAGGATCG................................................................................................ 21 2 2 3.00 6 0 0 6
............................................................AAGGCTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTCGCCTCCTAT.......................................................... 24 2 1 3.00 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAT........................................................... 23 2 2 2.50 5 5 0 0
...............................................................GTTACTTGTTAGTTCAGGT................................................................................................... 19 1 3 2.33 7 6 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTGAAT........................................................ 26 2 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAAAT......................................................... 25 2 1 2.00 2 2 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGT................................................................................................... 23 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTCGTTCAGGAT.................................................................................................. 23 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGCG.................................................................................................. 23 2 1 2.00 2 0 0 2
..................................................................................................ATGAACTATTGCAGTAGCCTCCTTAT......................................................... 26 3 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAATTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
...................................................................................................TGACCTATTGCAGTAGACTCCTAT.......................................................... 24 3 1 2.00 2 2 0 0
...........................................................AAAGGTTACTTGTTAGTTCAG..................................................................................................... 21 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGGA.................................................................................................. 23 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCCGGG................................................................................................... 22 2 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTGAAA........................................................ 26 3 1 2.00 2 2 0 0
............................................................AAGGTCACTTGTTAGTTCAGG.................................................................................................... 21 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGCT.................................................................................................. 23 2 1 2.00 2 2 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGAAA................................................................................................. 25 3 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAC......................................................... 25 0 1 2.00 2 2 0 0
............................................................AAGGTTAATTGTTAGTTCAGG.................................................................................................... 21 1 1 2.00 2 2 0 0
............................................................ACGGTTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
..........................................................AAAAGGTTACTTGTTAGTTCAGG.................................................................................................... 23 1 1 2.00 2 2 0 0
............................................................CAGGTTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGATAGTTCAGG.................................................................................................... 21 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGTAA................................................................................................. 24 3 2 2.00 4 0 4 0
............................................................AAGGTTACTTGTTAGTTCAGGCA.................................................................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................ATGAACTATTGCAGTAGCCTCCTA........................................................... 24 1 1 2.00 2 2 0 0
............................................................AGGGTTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 2.00 2 0 2 0
............................................................AAGGATACTTGTTAGTTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTG.......................................................... 24 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTCGTTCAG..................................................................................................... 20 1 1 2.00 2 2 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTTAA......................................................... 24 2 1 2.00 2 2 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGACCTCATTAC.......................................................................................... 32 1 1 2.00 2 2 0 0
............................................................ACGGTTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAG......................................................... 25 2 1 2.00 2 2 0 0
......................................................................................................ACTATTGCAGTAGCCTCCTAT.......................................................... 21 1 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTCTTT........................................................ 26 3 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTCGTTCAGGAG.................................................................................................. 23 2 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAGA........................................................ 26 2 1 2.00 2 2 0 0
............................................................AAGGGTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGA.................................................................................................... 21 1 2 2.00 4 4 0 0
...................................................................................................TGACCTATTGCAGTAGCCTCCTAT.......................................................... 24 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGATAGTTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGACTCCT............................................................ 22 1 1 2.00 2 2 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCTT........................................................... 24 1 1 2.00 2 2 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTAT.......................................................... 23 1 1 2.00 2 2 0 0
............................................................AAGGGTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGATTT................................................................................................ 25 2 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTGGTTCAGGAA.................................................................................................. 23 2 1 2.00 2 2 0 0
........................................................................................................TATTGCAGTAGCCTCCTAT.......................................................... 19 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCCGGC................................................................................................... 22 2 1 2.00 2 2 0 0
...................................................................................................TGACCTATTGCAGTAGCCTCC............................................................. 21 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGCTAGTTCAGGAA.................................................................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCT............................................................ 23 0 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTCCAGGA................................................................................................... 22 1 1 2.00 2 2 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCTAT.......................................................... 25 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAAA................................................................................................ 25 3 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTG........................................................... 23 1 1 2.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCCGGT................................................................................................... 22 2 1 2.00 2 2 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCTAAT......................................................... 26 1 1 2.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTGTTT........................................................ 26 3 2 1.50 3 3 0 0
...................................................................................................TGAACTATTGAAGTAGCCTCCTAT.......................................................... 24 2 2 1.50 3 3 0 0
............................................................AAGGTTACTTGTTAGTTCAGGTAT................................................................................................. 24 3 2 1.50 3 3 0 0
...................................................................................................TGAACTATTGCAGTAGCCT............................................................... 19 0 2 1.50 3 3 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCAT........................................................... 22 2 2 1.50 3 3 0 0
............................................................CAGGTTACTTGTTAGTTCAGGAA.................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAC.................................................................................................. 23 0 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAATT....................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................ATGAACTATTGCAGTAGCCTCCTTT.......................................................... 25 3 3 1.00 3 3 0 0
............................................................AAGGTTACTTGTTAGTTCAGGTTCTAA.............................................................................................. 27 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAGTA........................................................ 26 3 1 1.00 1 1 0 0
.........................................................................................................ATTGCAGTAGCCTCCT............................................................ 16 0 1 1.00 1 0 1 0
............................................................CAGGTTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCAT............................................................ 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTACAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTTAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGCTCAGGAA.................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTCCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTATA........................................................ 26 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTCT.......................................................... 24 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTCTTAGTTCAGGAG.................................................................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTCTTGCAGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
...........................................................AAAGGTTACTTATTAGTTCAGGA................................................................................................... 23 2 1 1.00 1 1 0 0
...................................................................................................AGAACTATTGCAGTAGCCTCCTT........................................................... 23 2 1 1.00 1 1 0 0
............................................................AACGTTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 0 1 0
............................................................AAGGTTACTTGTTAGTACAGGATT................................................................................................. 24 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCCGTAGCCTCCTTA.......................................................... 24 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGCTCAGG.................................................................................................... 21 1 1 1.00 1 0 1 0
...........................................................AAAGGTTACTTGTTAGTTCAGGC................................................................................................... 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCCGTAGCCTCCTATA......................................................... 25 3 1 1.00 1 1 0 0
............................................................AAGGTTACTTGATAGTTCAGGAC.................................................................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGCAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGTA................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTC.......................................................... 24 2 2 1.00 2 2 0 0
...........................................................CAAGGTTACTTGTTAGTTCAGGA................................................................................................... 23 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTTTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................AAGATTACTTGTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................ATGGTTAGTTGTTAGTTCAGGA................................................................................................... 22 2 1 1.00 1 1 0 0
..............................................................GGTTACTTGTTAGTTAAGG.................................................................................................... 19 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCCGGAG.................................................................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAATAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
.........................................................AAAAAGGTTACTTGTTAGTTCAGGAA.................................................................................................. 26 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCTGTAGCCTCCTAT.......................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................TGACCTATTGCAGTAGCCTCCTAA.......................................................... 24 1 1 1.00 1 1 0 0
............................................................AAAGTTACTTGTTCGTTCAGGA................................................................................................... 22 2 1 1.00 1 1 0 0
......................................................................................................ACTATTGCAGTAGCCTCCT............................................................ 19 0 1 1.00 1 0 1 0
...................................................................................................TGACCTATTGCAGTAGCCTCCTA........................................................... 23 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTCGTTCAGGT................................................................................................... 22 2 2 1.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTAGA........................................................ 26 3 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCATGAA.................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCCGGATT................................................................................................. 24 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGAAGCCTCCAA........................................................... 23 2 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTATTTT....................................................... 26 3 1 1.00 1 1 0 0
............................................................AAGGATACTTGTTCGTTCAGGA................................................................................................... 22 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGACCTC............................................................................................... 26 0 1 1.00 1 1 0 0
............................................................AAGGATACTTGTTAGTTCAGGAT.................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGGT.................................................................................................. 23 2 1 1.00 1 1 0 0
.............................................................AGGTTACTTGTTAGTTCAGGAA.................................................................................................. 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGCTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTCGTTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCAATAT........................................................ 26 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAGG......................................................... 25 2 1 1.00 1 1 0 0
..............................................................................................CTCGGTGAACTATTGCAGTAGCCTCCT............................................................ 27 3 1 1.00 1 1 0 0
............................................................CAGGTTACTTGTTAGTTCAGGAAA................................................................................................. 24 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTACCCTCCTT........................................................... 23 2 1 1.00 1 1 0 0
.............................................................AGGTTACTTGTTAGTTCAGT.................................................................................................... 20 1 1 1.00 1 0 1 0
.........................................................................................................................AACTGGTTATCCCACCTCCATTCTTG.................................. 26 0 1 1.00 1 0 1 0
...................................................................................................TGAACTATTGCAGTCGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
............................................................AAGCTTACTTGTTAATTCAGGAC.................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................AAGCTTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGCTAGTTCAGGAT.................................................................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGCAGCCTCCTAT.......................................................... 24 2 1 1.00 1 1 0 0
............................................................AAGGTTACCTGTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGATACTTCAGGACC................................................................................................. 24 2 1 1.00 1 1 0 0
............................................................AAGGTTCCTTGTTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATGA........................................................ 26 3 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAGAT................................................................................................ 25 2 1 1.00 1 1 0 0
.............................................................AGGTTACTTGTTAGTTCA...................................................................................................... 18 0 1 1.00 1 0 1 0
............................................................AAGGTTACTTATTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 0 1 0
..................................................................................................ATGAACTATTGCAGTAGCCTCCTT........................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCGCCTAT.......................................................... 24 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGC.................................................................................................... 21 1 1 1.00 1 0 1 0
...................................................................................................TGACCTATTGCAGTAGCCTCCTATT......................................................... 25 3 1 1.00 1 1 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCTTTTT........................................................ 27 3 3 1.00 3 3 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTCT.......................................................... 23 2 1 1.00 1 1 0 0
............................................................AAGGATACTTGTTAGTTCAGGAAT................................................................................................. 24 3 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGGAGCCTCCTATT......................................................... 25 3 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCAGTCGCCTCCTTA.......................................................... 23 2 1 1.00 1 1 0 0
...................................................................................................TGTACTATTGCAGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
...........................................................AAAGGTTACTTGTTCGTTCAGGA................................................................................................... 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTCAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................AGAACTATTGCGGTAGCCTCCTAT.......................................................... 24 3 1 1.00 1 1 0 0
...............................................................GTTACTTGTTAGTTCAGG.................................................................................................... 18 0 1 1.00 1 0 1 0
............................................................AAGGTTACTTGTTAGTTAAGG.................................................................................................... 21 1 1 1.00 1 0 1 0
...................................................................................................TGAACTATTGCAGTAGCCTCCCAAT......................................................... 25 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCATG.................................................................................................... 21 1 1 1.00 1 0 1 0
...................................................................................................TGAACTATTGCAGTAGCCCCCTAT.......................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCCGTAGCCTCCTT........................................................... 23 2 2 1.00 2 2 0 0
..................................................................................................CTGAACTATTGCAGTAGCCTCCTTAT......................................................... 26 2 1 1.00 1 1 0 0
...................................................................................................TGCACTATTGCAGTAGCCTCCTT........................................................... 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCCGTAGCCTCCTATT......................................................... 25 3 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCCG..................................................................................................... 20 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTACCCTCCTA........................................................... 23 1 1 1.00 1 1 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGAG.................................................................................................. 24 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAGT................................................................................................ 25 2 1 1.00 1 1 0 0
.............................................................AGGTTACTTGTTAGTTCAGGAT.................................................................................................. 22 1 1 1.00 1 1 0 0
.........................................................AAAAAGGTTACTTGTTAGTTCAGG.................................................................................................... 24 2 1 1.00 1 1 0 0
............................................................ACGGTTACTTGTTAGTTCAG..................................................................................................... 20 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGACA................................................................................................. 24 1 1 1.00 1 1 0 0
.......................................................................................................CTATTGCAGTAGCCTCC............................................................. 17 0 1 1.00 1 1 0 0
............................................................AAGGTTACTTGCTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................AAGATTACTTGTTCGTTCAGGA................................................................................................... 22 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTATT........................................................ 26 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGTAGTAGCCTCCTA........................................................... 23 1 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCAGTAGCCTC.............................................................. 19 0 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAAT................................................................................................ 25 2 1 1.00 1 0 1 0
............................................................AAGGTTACTTCTTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTAA.......................................................... 23 0 1 1.00 1 1 0 0
.........................................................AAAAAGGTTACTTGTTAGTTCAGGA................................................................................................... 25 2 1 1.00 1 1 0 0
...................................................................................................TGAACGATTGCAGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
............................................................ATGGTTACTTGTTAGTTCAGGA................................................................................................... 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGTG.................................................................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTTGT......................................................... 25 3 2 1.00 2 2 0 0
...........................................................AAAGGTTACTTGTTAGTTCAGGG................................................................................................... 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCCGGGA.................................................................................................. 23 3 1 1.00 1 1 0 0
...................................................................................................TGAATTATTGCAGTAGCCTCCTT........................................................... 23 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCAGGATAT................................................................................................ 25 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGAAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTCCAGGC................................................................................................... 22 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTATAG........................................................ 26 3 1 1.00 1 1 0 0
..............................................................GGTTACTTGTTAGTTCAGGA................................................................................................... 20 0 1 1.00 1 0 1 0
............................................................AAGGTTATTTGTTAGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
.................................................................................................AATGAACTATTGCAGTAGCCTCCTTA.......................................................... 26 3 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTAGTTCCGGCA.................................................................................................. 23 3 2 1.00 2 2 0 0
............................................................AAGGTTACTTGTTAGTTCAGGAAGA................................................................................................ 25 3 4 1.00 4 4 0 0
............................................................AAGGTTTCTTGTTAGTTCAGGAA.................................................................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCTGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
...................................................................................................TGCACTATTGCCGTAGCCTCCTAT.......................................................... 24 3 1 1.00 1 0 0 1
............................................................AAGGTTACTTGTTATTTCAGGA................................................................................................... 22 1 1 1.00 1 0 1 0
...................................................................................................TGAACTTTTGCAGTAGCCTCCTA........................................................... 23 1 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCGGTAGCCTCCTT........................................................... 22 2 1 1.00 1 1 0 0
............................................................AAGGTTACTTGTTTGTTCAGG.................................................................................................... 21 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCCGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCTAAAAT....................................................... 27 3 3 1.00 3 3 0 0
............................................................AAGGTTACTTGTTAGTTCAGGATA................................................................................................. 24 2 1 1.00 1 1 0 0
....................................................................................................GAACTATTGCAGTAGCCTCCTATAA........................................................ 25 3 2 1.00 2 2 0 0
...................................................................................................TGAACTATTGCAGTAGCCTCCATAA......................................................... 25 3 1 1.00 1 1 0 0
...................................................................................................TGAACTCTTGCAGTAGCCTCCTA........................................................... 23 1 1 1.00 1 1 0 0
...................................................................................................TGAACTAATGCAGTAGCCTCCT............................................................ 22 1 1 1.00 1 1 0 0

Anti-sense strand reads

CGACACTAGTAGGATTAATGACGTTGTTGTGTCCCCCAACACATCTGCCATTGAACAATCTTCCAATGAACAATCAAGTCCTGGAGTAATGAAAGACGGACTTGATAACGTCATCGGAGGATTGACCAATAGGGTGGAGGTAAGAACGGGGAAGATTCAGAAAAAGGTCATATTACGACAT
*********************************************..(((((((.(((((.((((((((.(((((((((((................)))))))))..)))))))))).))))).)))))))....*********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:45 PM