ID:

rno-mir-802

 Coordinate:

chr11:33570256-33570351 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.7 -33.7 -33.4 -33.4

Sense Strand Reads

TGAGCACACGCCCCCCCACCTGACTCTGCGTAACCAGTTACGTGGCCACAGTCCTATTATTTGCAGTCAGTAACAAAGATTCATCCTTGTGTCGATCATACAGCACGGAGAGTCTTTGTCACTCAGTGTAATTAATAGCCTTCACCTCGCAAGGGACGATGGGAGGTCACTGTTCTCATGTGACCCGGGTGTCCTC
***********************************...((((.((........((((((.(((((...(((.((((((((((.(((..((((..........))))))))))))))))).)))...))))).))))))......)).))..........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
..................................................................TCAGTAACAAAGATTCATCCTTG........................................................................................................... 23 0 1 5.00 5 5
...................................................................CAGTAACAAAGATTCATCCTTGT.......................................................................................................... 23 0 1 2.00 2 2
...................................................................CAGTAACAAAGATTCATCCTTGTGT........................................................................................................ 25 0 1 1.00 1 1
....................................................................AGTAACAAAGATTCATCCTTGTGT........................................................................................................ 24 0 1 1.00 1 1
..................................................................TCAGTAACAAAGATTCATCCTTGT.......................................................................................................... 24 0 1 1.00 1 1

Anti-sense strand reads

ACTCGTGTGCGGGGGGGTGGACTGAGACGCATTGGTCAATGCACCGGTGTCAGGATAATAAACGTCAGTCATTGTTTCTAAGTAGGAACACAGCTAGTATGTCGTGCCTCTCAGAAACAGTGAGTCACATTAATTATCGGAAGTGGAGCGTTCCCTGCTACCCTCCAGTGACAAGAGTACACTGGGCCCACAGGAG
***********************************...((((.((........((((((.(((((...(((.((((((((((.(((..((((..........))))))))))))))))).)))...))))).))))))......)).))..........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:33 PM