ID:

rno-mir-762

Coordinate:

chr1:199158825-199158899 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

ATCTCCGGACCTTCTCGATGGTCGCCATCACCTTTTTGATGTCATCTTTGGCCCGGCTCCGGGTCTCGGCCCGCACGGTCCGGCCGGCCATGCTGGCGGGGCTAGGGCCGGGACAGAGCCCGTGGTGGGGCGGCCTGCGGTCCGGCGATCTCAGGCTGCGCGCCAGGCCCCGGCG
***********************************...............((((.(((.(((((((((((((....(((((.((((((...)))))).))))).)))))))).....))))).))).)))).........***********************************
Read size # Mismatch Hit Count Total Norm Total

Anti-sense strand reads

TAGAGGCCTGGAAGAGCTACCAGCGGTAGTGGAAAAACTACAGTAGAAACCGGGCCGAGGCCCAGAGCCGGGCGTGCCAGGCCGGCCGGTACGACCGCCCCGATCCCGGCCCTGTCTCGGGCACCACCCCGCCGGACGCCAGGCCGCTAGAGTCCGACGCGCGGTCCGGGGCCGC
***********************************...............((((.(((.(((((((((((((....(((((.((((((...)))))).))))).)))))))).....))))).))).)))).........***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528818
Adult_testes_Mili_IP
GSM1528817
Adult_testes
..........................................................................................................................................GCAGGCCGCTAGAGTCCGACGCGCGGT.......... 27 1 1 4.00 4 4 0
.............................................................................................................................GCCCCGCCGGACGCCAGGCCGCTAGAGTCC.................... 30 1 1 2.00 2 2 0
...................................................................................................................................................TAGAGTCCGACGCGC............. 15 0 1 1.00 1 0 1
..................ACCAGCGGTAGTGGAAAAACTACAGTAGA................................................................................................................................ 29 0 1 1.00 1 0 1
.............................................................................................................................GCCACGCCGGACGCCAGGCCGCTAGAGTCC.................... 30 2 1 1.00 1 1 0

Generated: 04/30/2015 at 05:31 PM