ID:

rno-mir-760

 Coordinate:

chr2:225873354-225873433 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.2 -47.2 -47.2

Sense Strand Reads

GCTCCTCGGCGGCGTAGCGGATAAGCTCCCGGGAGGATGCCTCGGTACGGGGCGCGTCGCCCCCCTCAGGCCACCAGAGCCCGGATACCTCAGAAATTCGGCTCTGGGTCTGTGGGGAGCGAAATGCAACCCAAACCCCGTTTCCCCGAAGCACCGCGCAGATAAACACGCACAAGCACG
**********************************************..(((..(((((((.((((.((((((..(((((((.((((.........))))))))))))))))).)))).))))..)))..)))....******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAA.......................................................... 24 2 1 15.00 15 12 3 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGT............................................................ 23 1 1 11.00 11 11 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGT............................................................ 22 1 1 10.00 10 5 3 2
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTT........................................................... 23 2 1 9.00 9 2 6 1
..................................................................................................CGGCTCTGGGTCTGTGGGGAGCG........................................................... 23 0 1 6.00 6 0 6 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTCG.......................................................... 24 3 1 6.00 6 0 6 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGA............................................................ 22 1 1 5.00 5 5 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTA.......................................................... 24 2 1 4.00 4 4 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGAAA.......................................................... 24 2 1 3.00 3 3 0 0
...................................................................................................GGCTCTGGGTCTGTGGGGAG............................................................. 20 0 1 3.00 3 3 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGA............................................................ 23 1 1 3.00 3 3 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAT.......................................................... 24 3 4 2.25 9 9 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTATA......................................................... 25 3 1 2.00 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGAT........................................................... 23 2 1 2.00 2 2 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGTTT.......................................................... 25 3 1 2.00 2 2 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAA............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTA........................................................... 23 2 1 2.00 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGATCG........................................................... 23 1 1 2.00 2 0 2 0
...................................................................................................GGCTCTGGGTCTGTGGGGAGTTA.......................................................... 23 2 2 2.00 4 4 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTAA......................................................... 25 2 1 2.00 2 2 0 0
.............................................................CCCCTCAGGCCACCAGAGCCCGGA............................................................................................... 24 0 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGCTTA......................................................... 26 2 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAAT............................................................ 23 2 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGTAT.......................................................... 25 3 2 1.00 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGATAAA.......................................................... 24 3 1 1.00 1 1 0 0
............................................................ACCCCTCAGGCCACCAGAGCCCGG................................................................................................ 24 1 1 1.00 1 0 0 1
.................................................................................................ACGGCTCTGGGTCTGTGGGGAGT............................................................ 23 2 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGTT........................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAAT......................................................... 25 3 1 1.00 1 1 0 0
...............................................................................................AATCGGCTCTGGGTCTGTGGGGAGT............................................................ 25 2 1 1.00 1 0 0 1
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAAAT........................................................ 26 3 1 1.00 1 1 0 0
...................................................................................................GGCTCTGGGTCTGTGGGGAGTAAAATT...................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTGA......................................................... 25 3 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGAA........................................................... 23 2 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGG............................................................ 22 1 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAAA............................................................ 22 2 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAG............................................................. 21 0 1 1.00 1 0 0 1
..................................................................................................CGGCTCTGGGTCTGTGGGGA.............................................................. 20 0 1 1.00 1 0 0 1
..................................................................................................CGGCTCTGGGTCTGTGGGGAGCAA.......................................................... 24 1 1 1.00 1 0 1 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAAG......................................................... 25 3 1 1.00 1 1 0 0
.............................................................CCCCTCAGGCCACCAGAGCCCGG................................................................................................ 23 0 1 1.00 1 0 0 1
.........................................................................................TCAGAAATTCGGCTCTGGGTCTGTG.................................................................. 25 0 1 1.00 1 0 0 1
..................................................................................................CGGCTCTGGGTCTGTGGGGAGATAAA........................................................ 26 2 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTTA......................................................... 25 3 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGG................................................................. 18 0 1 1.00 1 0 0 1
.................................................................................................TCGGCTCTGGGTCTGGGGGGAGCTTA......................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAAA......................................................... 25 2 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTAT......................................................... 25 3 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAGTA........................................................... 24 2 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGATCG........................................................... 24 1 1 1.00 1 0 1 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGCCG.......................................................... 24 2 1 1.00 1 0 1 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGAAAA......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................ATCGGCTCTGGGTCTGTGGGGAGT............................................................ 24 2 1 1.00 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGGGGAAAC........................................................... 24 3 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGG............................................................... 19 0 1 1.00 1 0 0 1
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTTAAATT...................................................... 28 3 1 1.00 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGAAT.......................................................... 24 3 3 0.67 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAGTAG.......................................................... 24 3 6 0.33 2 2 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAAAT........................................................... 23 3 3 0.33 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGAAGAA.......................................................... 24 3 3 0.33 1 1 0 0
..................................................................................................CGGCTCTGGGTCTGTGGGGATTA........................................................... 23 3 7 0.29 2 1 0 1
...................................................................................................GGCACTGGGTCTGTGGGGAGT............................................................ 21 2 4 0.25 1 1 0 0
.................................................................................................TCGGCTCTGGGTCTGTGA................................................................. 18 1 5 0.20 1 0 0 1
.....................................................................................................CTCTGGGTCTGTGGGGAGAAAA......................................................... 22 2 5 0.20 1 1 0 0
..................................................................................................CTGCTCTGGGTCTGTGGGGAGTAA.......................................................... 24 3 10 0.10 1 1 0 0

Anti-sense strand reads

CGAGGAGCCGCCGCATCGCCTATTCGAGGGCCCTCCTACGGAGCCATGCCCCGCGCAGCGGGGGGAGTCCGGTGGTCTCGGGCCTATGGAGTCTTTAAGCCGAGACCCAGACACCCCTCGCTTTACGTTGGGTTTGGGGCAAAGGGGCTTCGTGGCGCGTCTATTTGTGCGTGTTCGTGC
********************************************..(((..(((((((.((((.((((((..(((((((.((((.........))))))))))))))))).)))).))))..)))..)))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:42 PM