ID:

rno-mir-675

 Coordinate:

chr1:215745981-215746064 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-57.6

Sense Strand Reads

AGGAGGCTGCAGTGGGTCCAGCCTGCAGACACACCATTCCCATGAGGCACTGCGGCCCAGGGACTGGTGCGGAAAGGGCCCACAGTGGACTTGGTGCACTGTATGCCCTAACCGCTCAGTCCCTGGGTCTGGCATGACAGACAGAACATTTCCAGGGGAGTCAAGGGCACAGGATGAAGCCAGA
*************************************************.(((((((((((((((((.((((..(((((..((((((.((...)).))))))..)))))..))))))))))))))))))..))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
................................................................TGGTGCGGAAAGGGCCCACAGTGT................................................................................................ 24 1 1 14.00 14 14
..................................................................................................CTGTATGCCCTAACCGCTCAGT................................................................ 22 0 1 3.00 3 3
................................................................TGGTGCGGAAAGGGCCCACAGTAA................................................................................................ 24 2 1 2.00 2 2
..................................................................................................CTGTATGCCCTAACCGCTCAG................................................................. 21 0 1 2.00 2 2
................................................................TGGTGCGGAAAGGGCCCACAGTGAA............................................................................................... 25 1 1 2.00 2 2
................................................................TGGTGCGGAAAGGGCCCACAGTGA................................................................................................ 24 1 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGTGTT............................................................................................... 25 2 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGTGTAA.............................................................................................. 26 2 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGTG................................................................................................. 23 0 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGT.................................................................................................. 22 0 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGTT................................................................................................. 23 1 1 1.00 1 1
...............................................................ATGGTGCGGAAAGGGCCCACAGTGT................................................................................................ 25 2 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCCACAGTGTA............................................................................................... 25 1 1 1.00 1 1
................................................................TGGTGCGGAAAGGGCCAACAGCGT................................................................................................ 24 3 2 0.50 1 1

Anti-sense strand reads

TCCTCCGACGTCACCCAGGTCGGACGTCTGTGTGGTAAGGGTACTCCGTGACGCCGGGTCCCTGACCACGCCTTTCCCGGGTGTCACCTGAACCACGTGACATACGGGATTGGCGAGTCAGGGACCCAGACCGTACTGTCTGTCTTGTAAAGGTCCCCTCAGTTCCCGTGTCCTACTTCGGTCT
*************************************************.(((((((((((((((((.((((..(((((..((((((.((...)).))))))..)))))..))))))))))))))))))..))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:30 PM