ID:

rno-mir-672

 Coordinate:

chrX:74982070-74982149 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.7 -45.1

Sense Strand Reads

GTGGACTAGAAAACTTTTGGTGCTTTAAATGTTCAAGATGGTGATCTAGCCCTTTAGTTTTGAGGTTGGTGTACTGTGTGTGAGTATACATATTTATCACACACAGTCGCCATCTTCGAAAGTGAGGGTGCACATCTTTCTCAGCCATCTCTTATTAAGCCGTTAAAGTAATGCCAACAT
*********************************************...((((((((.((((((((.(((((.(((((((((((.............)))))))))))))))).)))))))).)))))).))...********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
............................................................TGAGGTTGGTGTACTGTGTGTGA................................................................................................. 23 0 1 1042.00 1042 975 61 6
............................................................TGAGGTTGGTGTACTGTGTGTGAA................................................................................................ 24 1 1 50.00 50 46 2 2
............................................................TGAGGTTGGTGTACTGTGTGTGAT................................................................................................ 24 1 1 33.00 33 32 0 1
............................................................TGAGGTTGGTGTACTGTGTGTGAAT............................................................................................... 25 1 1 27.00 27 27 0 0
............................................................TGAGGTTGGTGTACTGTGTGTG.................................................................................................. 22 0 1 27.00 27 25 0 2
.............................................................GAGGTTGGTGTACTGTGTGTGA................................................................................................. 22 0 1 27.00 27 20 7 0
............................................................TGAGGTTGGTGTACTGTGTGTGT................................................................................................. 23 1 1 24.00 24 21 0 3
............................................................TGAGGTTGGTGTACTGTGTGTGAAA............................................................................................... 25 2 1 14.00 14 14 0 0
..................................................................................................ACACACAGTCGCCATCTTCGAAT........................................................... 23 1 1 12.00 12 11 0 1
..................................................................................................ACACACAGTCGCCATCTTCGA............................................................. 21 0 1 9.00 9 2 0 7
............................................................TGAGGTTGGTGTACTGTGTGT................................................................................................... 21 0 1 9.00 9 7 1 1
............................................................TGAGGTTGGTGTACTGTGTGTGAACG.............................................................................................. 26 3 1 9.00 9 0 9 0
............................................................TGAGGTTGGTGTACTGTGTGTGTAAA.............................................................................................. 26 3 1 7.00 7 0 7 0
............................................................TGAGGTTGGTGTAATGTGTGTGA................................................................................................. 23 1 1 7.00 7 7 0 0
..................................................................................................ACACACAGTCGCCATCTTCGAAA........................................................... 23 0 1 6.00 6 6 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGATT............................................................................................... 25 1 1 4.00 4 3 0 1
............................................................TGGGGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 4.00 4 4 0 0
............................................................TGAAGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 4.00 4 2 2 0
.............................................................GAGGTTGGTGTACTGTGTGTG.................................................................................................. 21 0 1 4.00 4 3 0 1
............................................................TGAGGTTGGTGTACTGTGTGTGAAGA.............................................................................................. 26 2 1 4.00 4 4 0 0
..................................................................................................ACACACAGTCGCCATCTTCGATT........................................................... 23 2 1 3.00 3 3 0 0
............................................................TGAGGTTGGGGTACTGTGTGTGA................................................................................................. 23 1 1 3.00 3 3 0 0
...........................................................ATGAGGTTGGTGTACTGTGTGTGA................................................................................................. 24 1 2 3.00 6 4 2 0
............................................................TGAGGTTGTTGTACTGTGTGTGA................................................................................................. 23 1 1 3.00 3 1 2 0
..................................................................................................ACACACAGTCGCCATCTTCGAGA........................................................... 23 1 1 3.00 3 3 0 0
............................................................TGAGGTTGGTGTACTGTGCGTGA................................................................................................. 23 1 1 3.00 3 3 0 0
.............................................................GAGGTTGGTGTACTGTGTGTGAAT............................................................................................... 24 1 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAC............................................................................................... 25 2 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAAAT............................................................................................. 27 2 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGACG............................................................................................... 25 2 2 2.00 4 0 4 0
............................................................TGAGGTAGGTGTACTGTGTGTGA................................................................................................. 23 1 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGAACTGTGTGTGA................................................................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................ACACACAGTCGCCATCTTCGAT............................................................ 22 1 1 2.00 2 2 0 0
............................................................TGAGGTTGGCGTACTGTGTGTGA................................................................................................. 23 1 1 2.00 2 2 0 0
............................................................TGAGGTTGATGTACTGTGTGTGA................................................................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................ACACACAGTCGCCATCTTCG.............................................................. 20 0 1 2.00 2 1 0 1
...........................................................TTGAGGTTGGTGTACTGTGTGTGA................................................................................................. 24 0 1 2.00 2 2 0 0
............................................................TGCGGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAAG.............................................................................................. 26 3 1 2.00 2 2 0 0
............................................................TGAGGTTGGTGTACTGTGTGCGA................................................................................................. 23 1 1 2.00 2 1 1 0
............................................................TGAGGTTGGTGTACTGTGTGTGTAA............................................................................................... 25 3 1 2.00 2 2 0 0
..................................................................................................ACACACAGGCGCCATCTTCGA............................................................. 21 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGGGA................................................................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................ACACACAATCGCCATCTTCGAAAT.......................................................... 24 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTTT................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACAGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGGGGTTGGTGTACTGTGTGTG.................................................................................................. 22 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGCGTG.................................................................................................. 22 1 1 1.00 1 1 0 0
............................................................TGGGGTTGGTGTACTGTGTGTGAAA............................................................................................... 25 3 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGGGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGTTT............................................................................................... 25 2 1 1.00 1 0 0 1
............................................................TGAGGTTGGTGTACTGTGTGAGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAAGT............................................................................................. 27 3 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTCA................................................................................................. 23 1 1 1.00 1 1 0 0
.............................................................GAGGTTGGTGTACTGTGTGTGAA................................................................................................ 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTATACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTTA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGGGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAG................................................................................................ 24 0 1 1.00 1 1 0 0
............................................................AGAGGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACCGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGATGGTGTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGAGTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTCTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGCGGTTGTTGTACTGTGTGTGA................................................................................................. 23 2 1 1.00 1 0 1 0
............................................................TGAGGTTGGTGAACAGTGTGTGA................................................................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCATCTTCGAATA.......................................................... 24 2 1 1.00 1 1 0 0
............................................................TGTGGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTAGTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
.............................................................GAGGTTTGTGTACTGTGTGTGA................................................................................................. 22 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTAATGTGTGTGAA................................................................................................ 24 2 1 1.00 1 0 1 0
.......................................................ACGATTGAGGTTGGTGTACTGTGTGTGA................................................................................................. 28 3 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTG.................................................................................................... 20 0 1 1.00 1 1 0 0
..........................................................AATGAGGTTGGTGTACTGTGTGTGATT............................................................................................... 27 3 2 1.00 2 2 0 0
............................................................TGAGGTTGGTGCACTGTGTGTGAA................................................................................................ 24 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAATT............................................................................................. 27 3 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGATCG.............................................................................................. 26 3 2 1.00 2 0 2 0
.............................................................GTGGTTGGAGTACTGTGTGTGA................................................................................................. 22 2 1 1.00 1 0 1 0
............................................................TGAGGTTGGTGTACTGTG...................................................................................................... 18 0 1 1.00 1 0 0 1
............................................................TGACGTTGGTGTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
.............................................................GAGGTTGGTGTACTGTGTGTGT................................................................................................. 22 1 1 1.00 1 1 0 0
............................................................TGAGGTTGATGTACTGTGTGTGAAT............................................................................................... 25 2 1 1.00 1 1 0 0
............................................................TGCAGTTGGTGTACTGTGTGTGA................................................................................................. 23 2 1 1.00 1 1 0 0
.............................................................GAGGTTGGTGTACTGTGTGTGAT................................................................................................ 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACCGTGTGTGAA................................................................................................ 24 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGC................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGCGTGTGAA................................................................................................ 24 2 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCATCTTC............................................................... 19 0 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCACCTTCGAAT........................................................... 23 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGCACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGATAG.............................................................................................. 26 3 1 1.00 1 0 0 1
............................................................TGAGGTTGGTTTACTGTGTGTGA................................................................................................. 23 1 1 1.00 1 0 0 1
............................................................TGAGGTTGGTGTACTGCGTGTCA................................................................................................. 23 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTTTGA................................................................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCATCTTCGTAA........................................................... 23 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGAGT............................................................................................... 25 0 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACAGTGTGTGAA................................................................................................ 24 2 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGATTA.............................................................................................. 26 1 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCATCTTCGAA............................................................ 22 0 1 1.00 1 1 0 0
..................................................................................................ACACACAGTCGCCATCTTAGA............................................................. 21 1 1 1.00 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTAAA................................................................................................ 24 2 2 0.50 1 0 1 0
............................................................TGAGGTTGGTATACTGTGTGTGAA................................................................................................ 24 2 2 0.50 1 0 1 0
...........................................................ATGAGGTTGGTGTACTGTGTGT................................................................................................... 22 1 2 0.50 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGC................................................................................................... 21 1 2 0.50 1 1 0 0
............................................................TGAGGGTGGGGTACTGTGTGTGA................................................................................................. 23 2 2 0.50 1 1 0 0
..................................................................................................CCAAACAGTCGCCATCTTCGAA............................................................ 22 2 2 0.50 1 1 0 0
...........................................................ATGAGGTTGGTGTACTGTGTGTGAAA............................................................................................... 26 3 2 0.50 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTTAT................................................................................................ 24 2 2 0.50 1 1 0 0
...........................................................ATGCGGTTGGTGTACTGTGTGTGA................................................................................................. 24 2 2 0.50 1 0 1 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAAT.............................................................................................. 26 3 2 0.50 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTAA................................................................................................. 23 1 2 0.50 1 1 0 0
..................................................................................................ACACACAGTCGCCCTCTTCGAAT........................................................... 23 2 2 0.50 1 1 0 0
............................................................TGAGGATGGCGTACTGTGTGTGA................................................................................................. 23 2 2 0.50 1 1 0 0
............................................................TGAGGTTGGTGTCCTGTGTGTGA................................................................................................. 23 1 2 0.50 1 0 1 0
............................................................TGAGGTTGGTGTACTGTGTGTGAAG............................................................................................... 25 2 2 0.50 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGTGTGTAG............................................................................................... 25 3 3 0.33 1 1 0 0
............................................................TGAGGTTGGAGTACTGTGTGTGT................................................................................................. 23 2 3 0.33 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGA..................................................................................................... 19 1 4 0.25 1 1 0 0
............................................................TGAGGTTGGTGTACTGTGAGTTAA................................................................................................ 24 3 5 0.20 1 1 0 0
.................................................................TTGGTGTACTGTGTGTGT................................................................................................. 18 1 20 0.05 1 0 0 1

Anti-sense strand reads

CACCTGATCTTTTGAAAACCACGAAATTTACAAGTTCTACCACTAGATCGGGAAATCAAAACTCCAACCACATGACACACACTCATATGTATAAATAGTGTGTGTCAGCGGTAGAAGCTTTCACTCCCACGTGTAGAAAGAGTCGGTAGAGAATAATTCGGCAATTTCATTACGGTTGTA
**********************************************...((((((((.((((((((.(((((.(((((((((((.............)))))))))))))))).)))))))).)))))).))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:51 PM