ID:rno-mir-671 |
Coordinate:chr4:7108747-7108827 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -52.4 | -51.8 | -51.8 |
 |
 |
 |
|
ACGCTGACTACCTGGCAGCCCGGGCCCGGCTGGCTGGTGAACTGGCAGGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCCAGGGCTGGTACAGAAGTTCTCCCTGAGGGACTGCAGCCCCCG
*********************************************..(((..((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).))))))))..)))...*********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGG................................................................................................. | 24 | 0 | 1 | 200.00 | 200 | 198 | 1 | 1 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGT................................................................................................ | 25 | 0 | 1 | 62.00 | 62 | 62 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGT................................................................................................. | 24 | 1 | 1 | 57.00 | 57 | 56 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGA................................................................................................. | 24 | 1 | 1 | 57.00 | 57 | 57 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAG.................................................................................................. | 23 | 0 | 1 | 41.00 | 41 | 37 | 4 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAT................................................................................................. | 24 | 2 | 1 | 33.00 | 33 | 33 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAA.................................................................................................. | 23 | 1 | 1 | 25.00 | 25 | 25 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGA................................................................................................ | 25 | 1 | 1 | 24.00 | 24 | 23 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTAT.............................................................................................. | 27 | 2 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTAA.............................................................................................. | 27 | 1 | 1 | 19.00 | 19 | 19 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTT............................................................................................... | 26 | 2 | 1 | 19.00 | 19 | 19 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAT............................................................................................... | 26 | 2 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTAA............................................................................................... | 26 | 3 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAAT.............................................................................................. | 27 | 3 | 1 | 16.00 | 16 | 16 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTT............................................................................................... | 26 | 1 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAA................................................................................................. | 24 | 2 | 3 | 12.00 | 36 | 36 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTAT............................................................................................... | 26 | 3 | 1 | 12.00 | 12 | 11 | 0 | 1 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAA............................................................................................... | 26 | 2 | 1 | 11.00 | 11 | 9 | 2 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGAA................................................................................................ | 25 | 2 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTCG.............................................................................................. | 27 | 2 | 1 | 10.00 | 10 | 0 | 0 | 10 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGAT................................................................................................ | 25 | 1 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTA................................................................................................ | 25 | 2 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTTT.............................................................................................. | 27 | 3 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAAT................................................................................................ | 25 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAAA.............................................................................................. | 27 | 2 | 1 | 7.00 | 7 | 6 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGA................................................................................................... | 22 | 0 | 1 | 7.00 | 7 | 4 | 3 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTT.............................................................................................. | 27 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTAAT............................................................................................. | 28 | 1 | 1 | 6.00 | 6 | 5 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGAAT............................................................................................... | 26 | 3 | 1 | 6.00 | 6 | 5 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAT.................................................................................................. | 23 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTA............................................................................................... | 26 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAGGA................................................................................................ | 24 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATTTT............................................................................................... | 26 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTAA.............................................................................................. | 27 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAGGT................................................................................................ | 24 | 0 | 1 | 4.00 | 4 | 3 | 1 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGG................................................................................................. | 25 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTAT.......................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGGA................................................................................................ | 26 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATT................................................................................................. | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................GAAGCCCTGGAGGGGCTGGAG.................................................................................................. | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAAA................................................................................................ | 25 | 3 | 3 | 2.33 | 7 | 7 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTTT............................................................................................. | 28 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGG................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTG............................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAG.................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGCGT................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATAA................................................................................................ | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAGA................................................................................................ | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAGTA............................................................................................. | 28 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGTGG................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTTTT............................................................................................. | 28 | 3 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAG................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAGG................................................................................................. | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTA.............................................................................................. | 27 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTT................................................................................................ | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTTTT............................................................................................ | 29 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTTTAGA.......................................................................................... | 31 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGAAGGGGCTGGAGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................CCGGTTCTCAGGGCTCCACCTAT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGAGGCTGGTAGT................................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGTAGT................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTAGAGGGGCTGGA................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAG.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAATT................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGCGA................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATTT................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGAAAGCCCTGGAGGGGCTGGAGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTTT.......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACTTT........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAAG................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATA................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................GGCAGGAAGCCCTGGAGGGGCTGGAGG................................................................................................. | 27 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGGAA.............................................................................................. | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGCAAA............................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................AGGAAGCCCTGGACGGGCTGGAGGTT............................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTC............................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGACGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAATTT............................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTTTA............................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGAAGGGGCTGGAG.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTAT.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCCGGAGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTA........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGACGGGCTGGAGTTT............................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGTAGCCCTGGAGGGGCTGGAGGTAA.............................................................................................. | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAAGGGCTGGTGG................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTAATCTAT......................................................................................... | 32 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGACGGGCTGGAGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGGTTT.............................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAGT................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTAA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTT........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGGTGA.............................................................................................. | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAATC............................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGGGTTT.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGACGGGCTGGAGGTCG.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................AGGAAGCCCTGGAAGGGCTGGAGGTCG.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ..................................................................................................CTCCGGTTCTCAGGGCTCCACTTTTT......................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGCGCTGGAGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGC................................................................................................. | 24 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTGA.............................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCCGGAGT................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGATTT............................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGT................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAG.................................................................................................. | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGGAAA.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGAAGGGGCTGGAGGAT............................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTCGAGGGGCTGGAGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCTACCTAA.......................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTTGAGGGGCTGGAAGT................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGCAGGGGCTGGAGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGGG................................................................................................. | 24 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGCAGCCCTGGAGGGGCTGGAGGTA............................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAAGAA............................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CTCCGGTTCTCAGGGCTCCAC.............................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGACGGGCTGGAGGT................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGTTA............................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGTAA.................................................................................................. | 23 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGCCTGGAGGTTTT............................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCCGGAGGTCG.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................AGGAAGCCCTGGAAGGGCAGGAGGTAA.............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTTA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGATAT................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CTCCGGTTCTCAGGGCTCCACCTAT.......................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGCCTGGAGGTT............................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGTAGGGGCTGGAGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGGTAAA............................................................................................. | 29 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGTAGT............................................................................................. | 28 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGCGG................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCACCTAAA......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGAAA............................................................................................... | 26 | 3 | 10 | 0.80 | 8 | 8 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGG.................................................................................................. | 23 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGAGGCTGGAGA................................................................................................. | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .......................................................TGGGTAGGAAGCCCTGGAGGGGCTGGAG.................................................................................................. | 28 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGGATT............................................................................................. | 28 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCATGGAGGGGCTGGAGGTAT.............................................................................................. | 27 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGGGA................................................................................................ | 25 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGTTGGAGT................................................................................................. | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................TGGCAGCCCTGGAGGGGCTGGAGGTT............................................................................................... | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAAGGGCTGGGGG................................................................................................. | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGAAG.............................................................................................. | 27 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGGCG.............................................................................................. | 27 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| ............................................................ATGAAGCCCTGGAGGGGCTGGAGA................................................................................................. | 24 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGAGGCCG.............................................................................................. | 27 | 3 | 3 | 0.33 | 1 | 0 | 0 | 1 |
| ............................................................AGGAAGCCCTGGAGGGGCTGTAAT................................................................................................. | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...........................................................AAGGAAGCCCTGGAGGGGCTGGAGAA................................................................................................ | 26 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................AGAAAGCCCTGGAGGGGCTGGA................................................................................................... | 22 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGAGGT................................................................................................. | 24 | 3 | 7 | 0.29 | 2 | 2 | 0 | 0 |
| .............................................................GGAAGCCCTGGAGGGGCTGGAAA................................................................................................. | 23 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGGA................................................................................................. | 24 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGGAT................................................................................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGCA.................................................................................................. | 23 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ...................................................................................................TCCGGTTCTCAGGGCTCCAAA............................................................. | 21 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTAGAGGGGCTGGAAA................................................................................................. | 24 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAGGGGCTGGCAA................................................................................................. | 24 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGAAGGGCTGGAAA................................................................................................. | 24 | 3 | 11 | 0.09 | 1 | 1 | 0 | 0 |
| ............................................................AGGAAGCCCTGGATGGGCTGGAAA................................................................................................. | 24 | 3 | 18 | 0.06 | 1 | 1 | 0 | 0 |
|
TGCGACTGATGGACCGTCGGGCCCGGGCCGACCGACCACTTGACCGTCCGGTCCTTCTCCTCCTTCGGGACCTCCCCGACCTCCACTACCTACAAAAGGAGGCCAAGAGTCCCGAGGTGGAGAAAGCTCGGCATCTCGGTCCCGACCATGTCTTCAAGAGGGACTCCCTGACGTCGGGGGC
***********************************************..(((..((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).))))))))..)))...********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:44 PM